Rmu_sc0012369.1_g000002

FRIGIDA-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012369.1
OG0000126
Physical Location & Seq
Reverse (-)
4511 .. 9618
5108 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012369.1_g000002.1.cds

Sequence Viewer

Length: 2229 bp
atgatggcgtcggagttgagacaattggaggagcagaggttgcaagagcaacaagaaacgtcatcaaccctgcttcggttgattaaacgcatgaagaacatggaggagaagtttcggtcgacccgaaattctgcccaggtccgatgtcaagagttggaggatcgggagaggcgaatcggagatgagaggagcaaactggacgtgttgaaggccgagacggagaacaaagctgtggagcttcgaagccttgagaagctgatccaggagagacaagaagaagctgtaaaaggtcagagtcacttagactcgctcaagttgttaatccaagaacatgtagaagaactgcagtttaaagagaagcggttctcggatcttgagagaatgattggtgtgaaggagggagagtgtgagtcggttcagaagagaatgaaggagagcttggagaaactgaatagggttgagaaggaaatagaagagaagattcaattgaaacaaaagttaagtagggcaatggaggtgaaagggaaggtgttttgtttgcataagacatcaatgaaggagtggtcgagaaagcttgaagtaaaagggagggaacttgaagaattgtctgagaagattgagttgaaagaaaaacaatttgaaccgaaagtggaggagattcgtttgattgaaaaaagggtaaatgaatgcctgaatgagattgaattgaaagaaaggcatcttcagtcactcgaaaaatcaattcaagagcgtgaaaattcgttagaagaacgcgaaaagcacttagattcaatctctcatggacttgaaatgagagagaaggaacttgatctaaaggccaaagaacttgaaccgaagcaatatgtaccggcaccagcaagtaatgtcatttcttcccttatcgaagttggagaaccagaatctttactagccaaaaaagtagcagtttcatcttcttcaaatcctcaattaagtgactccttaaatgcaaggaatttgcatggacaagtgactgggaatgatttgcttgagaaccaattttttgataatctgcaaagttcattagaccctgcaaaacttgtgttggattggatgcaaacttatctctcacaatattggacaaaaggtgatgttggttttgaagtaacttccatcaaaacctacatttccctattagagcagctactgagattctcaccacatgctggagctcaggtgaaaggggatgcaatgaagttggcagtccagtggaaagcaaatatgagagctgatacagagaattccttggaaattttgggatttttgcacttcctagctacatttgggttgctatatactctaaatgtagatgaaattgtaaagcttcttgggttgatttctcagcataaagaggctctagaattatgtcagacacttgattttgcagatgaaatccctgagcagtttgatgaatccttccattttgttgttcacatggcagagtttatcgggactcttgttgaaaggaagcagctgatggaagccgttggactgatttttacctttaagttaagtgacaagtttcctcccggaccactcctaaaagaatacatggaggaacaaataaataaaattcaggaacattcttatgttgatataaatttgtcaaggcttacgtactttttctcccaggttaggattgtggacgaccagataactcgtctaagagctgcgattaacatgatcaaaaaccacaatctggagtcgacggagtgtgcatcaacaatcattgaaattcaaataactcgactgcagcaagtaaaggagaactggagacttcaggcggcgaatttggcaactgtgccaaaaagaggaaccaaacgtagtagcagcactcttcctactgcgtttgaaccccgacagcagctcaataaagttcatcggaaagctgtagcggttcctcagccttctgcattgcaaatttacaccccgatctctccgcagtcagatctttcatctgtgctgttgcataaggggcagtctggcgccgctcagaacactggtatacactaccctcactctgagatattattttgtgcttcgttgtgtggtagtaaggatgaaaggtctggccctcatccctctgctggcggcggcgacgtacggggcttttggaccgtgtctcttgattctcttctcctcgaggatgtagtggatggcggcggtgtgaggttgctaggaaacaagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Frigida

Protein Analysis

742

Amino Acids

84.97

Weight (kDa)

5.89

Isoelectric Point (pI)

51.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 2180
AccB1I GGYRCC 2 cut(s) 871, 2024
AccB7I CCANNNNNTGG 2 cut(s) 1205, 1738
AccBSI CCGCTC 1 cut(s) 2030
AccI GTMKAC 3 cut(s) 119, 1745, 2044
AccII CGCG 1 cut(s) 774
AciI CCGC 9 cut(s) 361, 1823, 1934, 1979, 2028, 2130, 2133, 2199, 2202
AclWI GGATC 3 cut(s) 168, 253, 378
AcuI CTGAAG 2 cut(s) 707, 1802
AcyI GRCGYC 2 cut(s) 8, 2025
AfaI GTAC 3 cut(s) 867, 1658, 2142
AfiI CCNNNNNNNGG 6 cut(s) 75, 1205, 1674, 1738, 1850, 2126
AflIII ACRYGT 2 cut(s) 201, 331
AjiI CACGTC 1 cut(s) 202
AjnI CCWGG 3 cut(s) 135, 261, 1668
AjuI GAANNNNNNNTTGG 2 cut(s) 422, 454
Alw21I GWGCWC 1 cut(s) 1213
Alw26I GTCTC 5 cut(s) 13, 209, 262, 1807, 2166
AlwI GGATC 3 cut(s) 168, 253, 378
AlwNI CAGNNNCTG 1 cut(s) 1186
Ama87I CYCGRG 1 cut(s) 2180
AoxI GGCC 3 cut(s) 210, 837, 2110
ApeKI GCWGC 6 cut(s) 1180, 1510, 1709, 1792, 1869, 1903
Asp700I GAANNNNTTC 1 cut(s) 362
AspLEI GCGC 1 cut(s) 2027
AspS9I GGNCC 4 cut(s) 139, 1571, 2111, 2154
AsuC2I CCSGG 1 cut(s) 1569
AsuHPI GGTGA 4 cut(s) 529, 1139, 1188, 1228
AsuII TTCGAA 1 cut(s) 241
AvaI CYCGRG 1 cut(s) 2180
AvaII GGWCC 3 cut(s) 139, 1571, 2154
BanI GGYRCC 2 cut(s) 871, 2024
BanII GRGCYC 1 cut(s) 1213
Bbv12I GWGCWC 1 cut(s) 1213
BbvCI CCTCAGC 1 cut(s) 1941
BbvI GCAGC 6 cut(s) 1192, 1522, 1696, 1804, 1881, 1915
BccI CCATC 3 cut(s) 1160, 1510, 2189
BceAI ACGGC 1 cut(s) 1508
BciT130I CCWGG 3 cut(s) 137, 263, 1670
BclI TGATCA 1 cut(s) 1722
BcnI CCSGG 1 cut(s) 1569
BcoDI GTCTC 5 cut(s) 13, 209, 262, 1807, 2166
BfaI CTAG 4 cut(s) 929, 1313, 1397, 2216
BfmI CTRYAG 3 cut(s) 344, 1790, 1929
BfoI RGCGCY 1 cut(s) 2028
BglII AGATCT 1 cut(s) 1987
Bme1390I CCNGG 4 cut(s) 137, 263, 1569, 1670
Bme18I GGWCC 3 cut(s) 139, 1571, 2154
BmeT110I CYCGRG 1 cut(s) 2180
BmgBI CACGTC 1 cut(s) 202
BmgT120I GGNCC 4 cut(s) 139, 1571, 2111, 2154
BmiI GGNNCC 4 cut(s) 873, 1855, 1938, 2026
BmrFI CCNGG 4 cut(s) 137, 263, 1569, 1670
BmrI ACTGGG 1 cut(s) 1023
BmsI GCATC 4 cut(s) 727, 1083, 1216, 1766
BmuI ACTGGG 1 cut(s) 1023
BpmI CTGGAG 3 cut(s) 1227, 1760, 1831
Bpu10I CCTNAGC 3 cut(s) 1212, 1437, 1941
Bpu14I TTCGAA 1 cut(s) 241
BpuEI CTTGAG 4 cut(s) 269, 296, 395, 1049
BpuMI CCSGG 1 cut(s) 1569
BsaAI YACGTR 1 cut(s) 1656
BsaHI GRCGYC 2 cut(s) 8, 2025
BsaJI CCNNGG 3 cut(s) 135, 1284, 1668
Bsc4I CCNNNNNNNGG 6 cut(s) 75, 1205, 1674, 1738, 1850, 2126
Bse118I RCCGGY 1 cut(s) 868
Bse1I ACTGG 5 cut(s) 201, 1018, 1246, 1814, 2044
Bse3DI GCAATG 3 cut(s) 516, 1236, 1952
BseBI CCWGG 3 cut(s) 137, 263, 1670
BseDI CCNNGG 3 cut(s) 135, 1284, 1668
BseGI GGATG 6 cut(s) 1098, 1231, 2104, 2116, 2191, 2200
BseLI CCNNNNNNNGG 6 cut(s) 75, 1205, 1674, 1738, 1850, 2126
BseMI GCAATG 3 cut(s) 516, 1236, 1952
BseMII CTCAG 8 cut(s) 600, 1178, 1226, 1394, 1428, 1955, 2045, 2052
BseNI ACTGG 5 cut(s) 201, 1018, 1246, 1814, 2044
BseRI GAGGAG 5 cut(s) 44, 119, 202, 668, 2168
BseXI GCAGC 6 cut(s) 1192, 1522, 1696, 1804, 1881, 1915
Bsh1236I CGCG 1 cut(s) 774
Bsh1285I CGRYCG 1 cut(s) 119
BshFI GGCC 3 cut(s) 212, 839, 2112
BshNI GGYRCC 2 cut(s) 871, 2024
BsiEI CGRYCG 1 cut(s) 119
BsiHKAI GWGCWC 1 cut(s) 1213
BsiHKCI CYCGRG 1 cut(s) 2180
BsiSI CCGG 2 cut(s) 869, 1569
BsiWI CGTACG 1 cut(s) 2140
BslFI GGGAC 1 cut(s) 1504
BslI CCNNNNNNNGG 6 cut(s) 75, 1205, 1674, 1738, 1850, 2126
BsmAI GTCTC 5 cut(s) 13, 209, 262, 1807, 2166
BsmBI CGTCTC 1 cut(s) 209
BsmFI GGGAC 1 cut(s) 1504
BsmI GAATGC 1 cut(s) 692
BsnI GGCC 3 cut(s) 212, 839, 2112
BsoBI CYCGRG 1 cut(s) 2180
Bsp119I TTCGAA 1 cut(s) 241
Bsp1286I GDGCHC 1 cut(s) 1213
Bsp143I GATC 7 cut(s) 160, 258, 370, 829, 1722, 1971, 1987
BspACI CCGC 9 cut(s) 361, 1823, 1934, 1979, 2028, 2130, 2133, 2199, 2202
BspANI GGCC 3 cut(s) 212, 839, 2112
BspCNI CTCAG 8 cut(s) 601, 1179, 1225, 1393, 1429, 1954, 2044, 2053
BspFNI CGCG 1 cut(s) 774
BspLI GGNNCC 4 cut(s) 873, 1855, 1938, 2026
BspMAI CTGCAG 2 cut(s) 348, 1794
BspPI GGATC 3 cut(s) 168, 253, 378
BspT104I TTCGAA 1 cut(s) 241
BspT107I GGYRCC 2 cut(s) 871, 2024
BsrBI CCGCTC 1 cut(s) 2030
BsrDI GCAATG 3 cut(s) 516, 1236, 1952
BsrFI RCCGGY 1 cut(s) 868
BsrI ACTGG 5 cut(s) 201, 1018, 1246, 1814, 2044
BssAI RCCGGY 1 cut(s) 868
BssECI CCNNGG 3 cut(s) 135, 1284, 1668
BssMI GATC 7 cut(s) 160, 258, 370, 829, 1722, 1971, 1987
BssNAI GTATAC 1 cut(s) 2045
BssNI GRCGYC 2 cut(s) 8, 2025
BssT1I CCWWGG 1 cut(s) 1284
Bst1107I GTATAC 1 cut(s) 2045
Bst2UI CCWGG 3 cut(s) 137, 263, 1670
Bst4CI ACNGT 2 cut(s) 1840, 2158
Bst6I CTCTTC 4 cut(s) 416, 468, 1881, 2178
BstACI GRCGYC 2 cut(s) 8, 2025
BstAPI GCANNNNNTGC 1 cut(s) 40
BstBAI YACGTR 1 cut(s) 1656
BstBI TTCGAA 1 cut(s) 241
BstC8I GCNNGC 1 cut(s) 2128
BstF5I GGATG 6 cut(s) 1098, 1231, 2104, 2116, 2191, 2200
BstFNI CGCG 1 cut(s) 774
BstH2I RGCGCY 1 cut(s) 2028
BstHHI GCGC 1 cut(s) 2027
BstKTI GATC 7 cut(s) 163, 261, 373, 832, 1725, 1974, 1990
BstMAI GTCTC 5 cut(s) 13, 209, 262, 1807, 2166
BstMBI GATC 7 cut(s) 160, 258, 370, 829, 1722, 1971, 1987
BstMCI CGRYCG 1 cut(s) 119
BstMWI GCNNNNNNNGC 3 cut(s) 40, 1832, 2014
BstNI CCWGG 3 cut(s) 137, 263, 1670
BstNSI RCATGY 2 cut(s) 335, 1205
BstSCI CCNGG 4 cut(s) 135, 261, 1567, 1668
BstSFI CTRYAG 3 cut(s) 344, 1790, 1929
BstSNI TACGTA 1 cut(s) 1656
BstUI CGCG 1 cut(s) 774
BstV1I GCAGC 6 cut(s) 1192, 1522, 1696, 1804, 1881, 1915
BstX2I RGATCY 2 cut(s) 370, 1987
BstYI RGATCY 2 cut(s) 370, 1987
BstZ17I GTATAC 1 cut(s) 2045
BsuRI GGCC 3 cut(s) 212, 839, 2112
BtrI CACGTC 1 cut(s) 202
BtsCI GGATG 6 cut(s) 1098, 1231, 2104, 2116, 2191, 2200
BtsIMutI CAGTG 2 cut(s) 1253, 2037
Cac8I GCNNGC 1 cut(s) 2128
CaiI CAGNNNCTG 1 cut(s) 1186
CfoI GCGC 1 cut(s) 2027
Cfr10I RCCGGY 1 cut(s) 868
Cfr13I GGNCC 4 cut(s) 139, 1571, 2111, 2154
Csp6I GTAC 3 cut(s) 866, 1657, 2141
CviAII CATG 9 cut(s) 91, 100, 332, 800, 1001, 1202, 1474, 1591, 1720
CviQI GTAC 3 cut(s) 866, 1657, 2141
DinI GGCGCC 1 cut(s) 2026
DpnI GATC 7 cut(s) 162, 260, 372, 831, 1724, 1973, 1989
DpnII GATC 7 cut(s) 160, 258, 370, 829, 1722, 1971, 1987
DraI TTTAAA 1 cut(s) 352
Eam1104I CTCTTC 4 cut(s) 416, 468, 1881, 2178
EarI CTCTTC 4 cut(s) 416, 468, 1881, 2178
Ecl136II GAGCTC 1 cut(s) 1211
Eco105I TACGTA 1 cut(s) 1656
Eco130I CCWWGG 1 cut(s) 1284
Eco24I GRGCYC 1 cut(s) 1213
Eco47I GGWCC 3 cut(s) 139, 1571, 2154
Eco53kI GAGCTC 1 cut(s) 1211
Eco57I CTGAAG 2 cut(s) 707, 1802
Eco88I CYCGRG 1 cut(s) 2180
EcoICRI GAGCTC 1 cut(s) 1211
EcoRI GAATTC 1 cut(s) 1279
EcoRII CCWGG 3 cut(s) 135, 261, 1668
EcoT14I CCWWGG 1 cut(s) 1284
EcoT38I GRGCYC 1 cut(s) 1213
EgeI GGCGCC 1 cut(s) 2026
EheI GGCGCC 1 cut(s) 2026
ErhI CCWWGG 1 cut(s) 1284
Esp3I CGTCTC 1 cut(s) 209
FaeI CATG 9 cut(s) 94, 103, 335, 803, 1004, 1205, 1477, 1594, 1723
FalI AAGNNNNNCTT 2 cut(s) 422, 454
FaqI GGGAC 1 cut(s) 1504
FatI CATG 9 cut(s) 90, 99, 331, 799, 1000, 1201, 1473, 1590, 1719
FbaI TGATCA 1 cut(s) 1722
FblI GTMKAC 3 cut(s) 119, 1745, 2044
FokI GGATG 6 cut(s) 1105, 1238, 2103, 2111, 2198, 2207
FriOI GRGCYC 1 cut(s) 1213
FspBI CTAG 4 cut(s) 929, 1313, 1397, 2216
GlaI GCGC 1 cut(s) 2026
GsuI CTGGAG 3 cut(s) 1227, 1760, 1831
HaeII RGCGCY 1 cut(s) 2028
HaeIII GGCC 3 cut(s) 212, 839, 2112
HapII CCGG 2 cut(s) 869, 1569
HhaI GCGC 1 cut(s) 2027
Hin1I GRCGYC 2 cut(s) 8, 2025
Hin1II CATG 9 cut(s) 94, 103, 335, 803, 1004, 1205, 1477, 1594, 1723
Hin6I GCGC 1 cut(s) 2025
HinP1I GCGC 1 cut(s) 2025
HincII GTYRAC 2 cut(s) 120, 1746
HindII GTYRAC 2 cut(s) 120, 1746
HindIII AAGCTT 2 cut(s) 572, 1361
HpaII CCGG 2 cut(s) 869, 1569
HphI GGTGA 4 cut(s) 529, 1139, 1188, 1228
Hpy166II GTNNAC 5 cut(s) 120, 1471, 1684, 1746, 2045
Hpy8I GTNNAC 5 cut(s) 120, 1471, 1684, 1746, 2045
Hpy99I CGWCG 3 cut(s) 13, 1750, 2141
HpyAV CCTTC 9 cut(s) 202, 388, 424, 457, 520, 550, 814, 1465, 1956
HpyCH4III ACNGT 2 cut(s) 1840, 2158
HpyCH4IV ACGT 5 cut(s) 59, 201, 1655, 1861, 2139
HpyF10VI GCNNNNNNNGC 3 cut(s) 40, 1832, 2014
HpySE526I ACGT 5 cut(s) 59, 201, 1655, 1861, 2139
Hsp92I GRCGYC 2 cut(s) 8, 2025
Hsp92II CATG 9 cut(s) 94, 103, 335, 803, 1004, 1205, 1477, 1594, 1723
HspAI GCGC 1 cut(s) 2025
KasI GGCGCC 1 cut(s) 2024
Ksp22I TGATCA 1 cut(s) 1722
Kzo9I GATC 7 cut(s) 160, 258, 370, 829, 1722, 1971, 1987
LmnI GCTCC 4 cut(s) 31, 189, 235, 1208
Lsp1109I GCAGC 6 cut(s) 1192, 1522, 1696, 1804, 1881, 1915
LweI GCATC 4 cut(s) 727, 1083, 1216, 1766
MaeI CTAG 4 cut(s) 929, 1313, 1397, 2216
MaeII ACGT 5 cut(s) 59, 201, 1655, 1861, 2139
MaeIII GTNAC 6 cut(s) 296, 726, 974, 1009, 1144, 1553
MalI GATC 7 cut(s) 162, 260, 372, 831, 1724, 1973, 1989
MbiI CCGCTC 1 cut(s) 2030
MboI GATC 7 cut(s) 160, 258, 370, 829, 1722, 1971, 1987
MfeI CAATTG 2 cut(s) 23, 485
MflI RGATCY 2 cut(s) 370, 1987
MhlI GDGCHC 1 cut(s) 1213
Mly113I GGCGCC 1 cut(s) 2025
MlyI GAGTC 6 cut(s) 299, 304, 419, 971, 1486, 1751
MmeI TCCRAC 4 cut(s) 135, 889, 1065, 1507
MroXI GAANNNNTTC 1 cut(s) 362
MseI TTAA 9 cut(s) 84, 320, 351, 500, 971, 983, 1545, 1550, 1716
MslI CAYNNNNRTG 1 cut(s) 1626
MspA1I CMGCKG 1 cut(s) 1513
MspI CCGG 2 cut(s) 869, 1569
MspR9I CCNGG 4 cut(s) 137, 263, 1569, 1670
MunI CAATTG 2 cut(s) 23, 485
Mva1269I GAATGC 1 cut(s) 692
MvaI CCWGG 3 cut(s) 137, 263, 1670
MvnI CGCG 1 cut(s) 774
MwoI GCNNNNNNNGC 3 cut(s) 40, 1832, 2014
NarI GGCGCC 1 cut(s) 2025
NciI CCSGG 1 cut(s) 1569
NdeII GATC 7 cut(s) 160, 258, 370, 829, 1722, 1971, 1987
NlaIII CATG 9 cut(s) 94, 103, 335, 803, 1004, 1205, 1477, 1594, 1723
NlaIV GGNNCC 4 cut(s) 873, 1855, 1938, 2026
NmeAIII GCCGAG 1 cut(s) 238
NmuCI GTSAC 5 cut(s) 296, 726, 974, 1009, 1553
NspI RCATGY 2 cut(s) 335, 1205
NspV TTCGAA 1 cut(s) 241
PaeR7I CTCGAG 1 cut(s) 2180
PciI ACATGT 1 cut(s) 331
PcsI WCGNNNNNNNCGW 2 cut(s) 121, 169
PctI GAATGC 1 cut(s) 692
PdmI GAANNNNTTC 1 cut(s) 362
PfeI GAWTC 8 cut(s) 174, 481, 658, 788, 920, 1191, 1451, 2168
Pfl23II CGTACG 1 cut(s) 2140
PflFI GACNNNGTC 1 cut(s) 2158
PflMI CCANNNNNTGG 2 cut(s) 1205, 1738
PfoI TCCNGGA 2 cut(s) 261, 1567
PleI GAGTC 6 cut(s) 299, 303, 418, 971, 1486, 1750
PluTI GGCGCC 1 cut(s) 2028
PpsI GAGTC 6 cut(s) 299, 303, 418, 971, 1486, 1750
Ppu21I YACGTR 1 cut(s) 1656
PscI ACATGT 1 cut(s) 331
Psp124BI GAGCTC 1 cut(s) 1213
Psp6I CCWGG 3 cut(s) 135, 261, 1668
PspGI CCWGG 3 cut(s) 135, 261, 1668
PspLI CGTACG 1 cut(s) 2140
PspN4I GGNNCC 4 cut(s) 873, 1855, 1938, 2026
PspPI GGNCC 4 cut(s) 139, 1571, 2111, 2154
PspXI VCTCGAGB 1 cut(s) 2180
PstI CTGCAG 2 cut(s) 348, 1794
PstNI CAGNNNCTG 1 cut(s) 1186
PsuI RGATCY 2 cut(s) 370, 1987
PsyI GACNNNGTC 1 cut(s) 2158
PvuII CAGCTG 1 cut(s) 1513
RsaI GTAC 3 cut(s) 867, 1658, 2142
RsaNI GTAC 3 cut(s) 866, 1657, 2141
RseI CAYNNNNRTG 1 cut(s) 1626
SacI GAGCTC 1 cut(s) 1213
SalI GTCGAC 2 cut(s) 118, 1744
SaqAI TTAA 9 cut(s) 84, 320, 351, 500, 971, 983, 1545, 1550, 1716
Sau3AI GATC 7 cut(s) 160, 258, 370, 829, 1722, 1971, 1987
Sau96I GGNCC 4 cut(s) 139, 1571, 2111, 2154
SchI GAGTC 6 cut(s) 299, 304, 419, 971, 1486, 1751
ScrFI CCNGG 4 cut(s) 137, 263, 1569, 1670
SduI GDGCHC 1 cut(s) 1213
SfaNI GCATC 4 cut(s) 727, 1083, 1216, 1766
SfcI CTRYAG 3 cut(s) 344, 1790, 1929
SfoI GGCGCC 1 cut(s) 2026
Sfr274I CTCGAG 1 cut(s) 2180
SfuI TTCGAA 1 cut(s) 241
SinI GGWCC 3 cut(s) 139, 1571, 2154
SlaI CTCGAG 1 cut(s) 2180
SmiMI CAYNNNNRTG 1 cut(s) 1626
SmlI CTYRAG 5 cut(s) 248, 311, 374, 1028, 2180
SmoI CTYRAG 5 cut(s) 248, 311, 374, 1028, 2180
SnaBI TACGTA 1 cut(s) 1656
SsiI CCGC 9 cut(s) 361, 1823, 1934, 1979, 2028, 2130, 2133, 2199, 2202
SspDI GGCGCC 1 cut(s) 2024
SspI AATATT 1 cut(s) 1115
SspMI CTAG 4 cut(s) 929, 1313, 1397, 2216
SstI GAGCTC 1 cut(s) 1213
StyD4I CCNGG 4 cut(s) 135, 261, 1567, 1668
StyI CCWWGG 1 cut(s) 1284
TaaI ACNGT 2 cut(s) 1840, 2158
TaiI ACGT 5 cut(s) 62, 204, 1658, 1864, 2142
TaqI TCGA 8 cut(s) 119, 241, 566, 732, 903, 1745, 1786, 2181
TaqII GACCGA 1 cut(s) 105
TauI GCSGC 5 cut(s) 1826, 2030, 2133, 2136, 2202
TfiI GAWTC 8 cut(s) 174, 481, 658, 788, 920, 1191, 1451, 2168
Tru1I TTAA 9 cut(s) 84, 320, 351, 500, 971, 983, 1545, 1550, 1716
Tru9I TTAA 9 cut(s) 84, 320, 351, 500, 971, 983, 1545, 1550, 1716
TscAI CASTG 2 cut(s) 1253, 2044
TseFI GTSAC 5 cut(s) 296, 726, 974, 1009, 1553
TseI GCWGC 6 cut(s) 1180, 1510, 1709, 1792, 1869, 1903
Tsp45I GTSAC 5 cut(s) 296, 726, 974, 1009, 1553
TspGWI ACGGA 2 cut(s) 233, 1763
TspRI CASTG 2 cut(s) 1253, 2044
Tth111I GACNNNGTC 1 cut(s) 2158
Van91I CCANNNNNTGG 2 cut(s) 1205, 1738
VpaK11BI GGWCC 3 cut(s) 139, 1571, 2154
XbaI TCTAGA 1 cut(s) 1396
XceI RCATGY 2 cut(s) 335, 1205
XhoI CTCGAG 1 cut(s) 2180
XmiI GTMKAC 3 cut(s) 119, 1745, 2044
XmnI GAANNNNTTC 1 cut(s) 362
XspI CTAG 4 cut(s) 929, 1313, 1397, 2216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.