Rh4DG162700

FRIGIDA-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0000126
Physical Location & Seq
Reverse (-)
32359681 .. 32364068
4388 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG162700.1

Sequence Viewer

Length: 2277 bp
ATGGAGGCAAGCCTGACTTTCAGAGTGAAAACACAAAGAACATTGGTCAAATGTGTAATTACGACAGTCCACGCTGTAAAAAAAACTTGGGCACGTGGCAACATCTGCAGCTTTGCGGCCCCACTAGACTTGACTCTCCCCCTGTTGATTCACAAAACTCTTTCGGCTTCTCCGTTCACACCTCCACCACCACACCTCTGCCAATTTAGGGTTTCCCTTTCGTTCAACAAATCTTCCCCCACACGGTCCGTACAGAAAAAAAAGGAGATGATGGCGTCGGAGTTGAGACAATTGGAGGAGCAGAGGTTGCAAGAGCAACAAGAAACGTCGTCAACCCTGCTTCGGTTGATTAAACGCATGAAGAACATGGAGGAGAAGTTTCGGTCGACCCGAAATTCTGCCCAGGTCCGATGTCAAGAGTTGGAGGATCGGGAGAGGCGAATCGGAGATGAGACGAGCAAACTGGACGTGTTGAAGGCCGAGACGGAGAACAAAGCTGTGGAGCTTCGAAGCCTTGAGAAGCTGATCCAAGAGAGACAAGAAGAAGCTGTAAAAGGTCAGAGTCACTTAGACTCGCTCAAGTTGTTAATCCAAGAACATGTAGAAGAACTGGAGTTTAAAGAGAAGCGGTTCTCGGATCTTGAGAGAATGATTGGTGTGAAGATGGGAGAGTGTGAGTCGGTTCAGAAGAGAATGAAGGAGAGCTTGGAGAAACTGAATAGGGTTGAGAAGGAAATAGAAGAGAAGATTCAATTGAAACAAAAGTTAAGTAGGGCAATGGAGGTGAAAGGGAAGGTGTTTTGTTTGCATAAGACATCAATGAAGGAGTGGTCGAGAAAGCTTGAAGTAAAAGGAAGGGAACTTGAAGAATTGTCTGAGAAGATTGAGTTGAAAGAAGAACAATTTGAACCGAAAGTGGAGGAGATTCGATTGATTGAAAAAAGGGTAAATGAATGCCTGAATGAGATTGAATTGAAAGAAAGGCATCTTCAGTCACTCGAAAAATCAATTCAAGAGCGTGAAAATTCGTTAGAAGAACGCGAAAAGCACTTAGATTCAGTCTCTCATGGACTTGAAATGAGAGAGAAGGAACTTGATCTAAAGGCCAAAGAACTTGAACCGAAGCAATATGTACCGGCACCAGCAAGTAATGTCATTTCTTCCCTTATCGAAGTTGGAGAACCAGAATCTTTACTAGCCAAAAAAGTAGCTGTTTCATCTTCTTCAAATCCTCAATTAAGTGATTCCTTAAATGCAAGGAATTTGCATGGACAAGTGACTGGGAATGATTTGCTTGAGAACCAATTTTTTGATAATCTGCAAAGTTCATTAGACCCTGCAAAACTTGTGTTGGATTGGATGCAAACTTATCTCTCACAATATTGGACAAAAGGTGATGTTGGTTTTGAGGTAACTTCCATCAAAACCTACATTTCCCTATTAGAGCAGCTACTGAGATTCTCACCACATGCTGGAGCTCAGGTGAAAGGGGATGCAATGAAGTTGGCAGTCCAGTGGAAAGCAAATATGAGAGCTGATACAGAGAATTCCTTGGAAATTTTGGGATTTTTGCACTTCCTAGCTACATTTGGGTTGCTATATACTCTGAATGTAGATGAAATTGTAAAGCTTCTTGGGATGATTTCTCAGCATAAAGAGGCTCTAGAATTATGTCAGACACTTGATTTTGCAGATGAAATCCCTGAGTTTATCGGGACTCTTGTTGAAAGGAAGCAGCTGATGGAAGCCGTTGGACTGATTTGTACCTTCAAGTTAAGTGACCAGTTTCCTCCCGGACCACTCCTAAAAGAATACATGGAGGAACAAATAAAGTGTTGCAGAAATGCTTACAAGAGAACCAAGTTACATAAAGAAAAGGTTAGGATTGTGGACGACCAGATAACTCGTCTAAGAGCTGCGATTAACATGATCAAAAACCACAATCTGGAGTCGACGGAGTGTGCATCAACAATCATTGAAATTCAAATAACTCGACTGCAGCACGTAAAGGAGAACTGGAGACTTCAGGCGGCGAATTTGGCAACTGTGCCAAAAAGAGGAACCAAACGTAGTAGCAGCACTCTTCCTACTGCGTTTGAACCCCGACAGCAGCTCAATAAAGTTCATCGGAAAGCTGTAGCGGTTCCTCAGCCTTCTGCATTGCAAATTTACACCCCGATCTCTCCGCAGTCAGATCTTTCATCTGTGCTGTTACATAAGGGGCAGTCTGGCGCCGCTCAGAACACTCGTATACACTACCCTCACTCTGGTACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Frigida

Protein Analysis

758

Amino Acids

86.99

Weight (kDa)

8.48

Isoelectric Point (pI)

52.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 412 - 672 5.2e-49 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1138, 2231
AccB7I CCANNNNNTGG 2 cut(s) 1472, 1945
AccBSI CCGCTC 1 cut(s) 2237
AccI GTMKAC 3 cut(s) 386, 1952, 2251
AccII CGCG 1 cut(s) 1041
AciI CCGC 6 cut(s) 116, 628, 2030, 2141, 2186, 2235
AclWI GGATC 3 cut(s) 435, 520, 645
AcsI RAATTY 8 cut(s) 394, 1024, 1261, 1546, 1557, 1980, 2035, 2166
AcuI CTGAAG 2 cut(s) 974, 2009
AcvI CACGTG 1 cut(s) 95
AcyI GRCGYC 2 cut(s) 275, 2232
AfaI GTAC 4 cut(s) 252, 1134, 1765, 2272
AfiI CCNNNNNNNGG 7 cut(s) 208, 243, 342, 1472, 1945, 2057, 2267
AflIII ACRYGT 2 cut(s) 468, 598
AjiI CACGTC 1 cut(s) 469
AjnI CCWGG 1 cut(s) 402
AjuI GAANNNNNNNTTGG 2 cut(s) 689, 721
Alw21I GWGCWC 1 cut(s) 1480
Alw26I GTCTC 6 cut(s) 280, 446, 476, 529, 1066, 2014
AlwI GGATC 3 cut(s) 435, 520, 645
AlwNI CAGNNNCTG 1 cut(s) 1453
AoxI GGCC 3 cut(s) 117, 477, 1104
ApeKI GCWGC 7 cut(s) 108, 1447, 1735, 1916, 1999, 2076, 2110
ApoI RAATTY 8 cut(s) 394, 1024, 1261, 1546, 1557, 1980, 2035, 2166
Asp700I GAANNNNTTC 1 cut(s) 629
AspLEI GCGC 1 cut(s) 2234
AspS9I GGNCC 4 cut(s) 118, 246, 406, 1796
AsuC2I CCSGG 1 cut(s) 1794
AsuHPI GGTGA 4 cut(s) 796, 1406, 1455, 1495
AsuII TTCGAA 1 cut(s) 508
AvaII GGWCC 3 cut(s) 246, 406, 1796
BaeGI GKGCMC 1 cut(s) 94
BanI GGYRCC 2 cut(s) 1138, 2231
BanII GRGCYC 1 cut(s) 1480
BbrPI CACGTG 1 cut(s) 95
Bbv12I GWGCWC 1 cut(s) 1480
BbvCI CCTCAGC 1 cut(s) 2148
BbvI GCAGC 7 cut(s) 120, 1459, 1747, 1903, 2011, 2088, 2122
BccI CCATC 4 cut(s) 265, 658, 1427, 1735
BceAI ACGGC 1 cut(s) 1733
BciT130I CCWGG 1 cut(s) 404
BclI TGATCA 1 cut(s) 1929
BcnI CCSGG 1 cut(s) 1794
BcoDI GTCTC 6 cut(s) 280, 446, 476, 529, 1066, 2014
BfaI CTAG 4 cut(s) 125, 1196, 1580, 1664
BfmI CTRYAG 3 cut(s) 106, 1997, 2136
BfoI RGCGCY 1 cut(s) 2235
BglII AGATCT 1 cut(s) 2194
Bme1390I CCNGG 2 cut(s) 404, 1794
Bme18I GGWCC 3 cut(s) 246, 406, 1796
BmgBI CACGTC 1 cut(s) 469
BmgT120I GGNCC 4 cut(s) 118, 246, 406, 1796
BmiI GGNNCC 5 cut(s) 120, 1140, 2062, 2145, 2233
BmrFI CCNGG 2 cut(s) 404, 1794
BmrI ACTGGG 1 cut(s) 1290
BmsI GCATC 4 cut(s) 994, 1350, 1483, 1973
BmuI ACTGGG 1 cut(s) 1290
BpmI CTGGAG 4 cut(s) 632, 1494, 1967, 2038
Bpu10I CCTNAGC 2 cut(s) 1479, 2148
Bpu14I TTCGAA 1 cut(s) 508
BpuEI CTTGAG 4 cut(s) 536, 563, 662, 1316
BpuMI CCSGG 1 cut(s) 1794
BsaAI YACGTR 2 cut(s) 95, 2005
BsaHI GRCGYC 2 cut(s) 275, 2232
BsaJI CCNNGG 2 cut(s) 402, 1551
BsaXI ACNNNNNCTCC 6 cut(s) 290, 320, 362, 392, 1467, 1497
Bsc4I CCNNNNNNNGG 7 cut(s) 208, 243, 342, 1472, 1945, 2057, 2267
Bse118I RCCGGY 1 cut(s) 1135
Bse1I ACTGG 6 cut(s) 468, 615, 1285, 1513, 1783, 2021
Bse3DI GCAATG 3 cut(s) 783, 1503, 2159
BseBI CCWGG 1 cut(s) 404
BseDI CCNNGG 2 cut(s) 402, 1551
BseGI GGATG 3 cut(s) 1365, 1498, 1644
BseLI CCNNNNNNNGG 7 cut(s) 208, 243, 342, 1472, 1945, 2057, 2267
BseMI GCAATG 3 cut(s) 783, 1503, 2159
BseMII CTCAG 7 cut(s) 867, 1445, 1493, 1661, 1695, 2162, 2252
BseNI ACTGG 6 cut(s) 468, 615, 1285, 1513, 1783, 2021
BseRI GAGGAG 3 cut(s) 311, 386, 935
BseSI GKGCMC 1 cut(s) 94
BseXI GCAGC 7 cut(s) 120, 1459, 1747, 1903, 2011, 2088, 2122
Bsh1236I CGCG 1 cut(s) 1041
Bsh1285I CGRYCG 1 cut(s) 386
BshFI GGCC 3 cut(s) 119, 479, 1106
BshNI GGYRCC 2 cut(s) 1138, 2231
BsiEI CGRYCG 1 cut(s) 386
BsiHKAI GWGCWC 1 cut(s) 1480
BsiSI CCGG 2 cut(s) 1136, 1794
BslFI GGGAC 1 cut(s) 1729
BslI CCNNNNNNNGG 7 cut(s) 208, 243, 342, 1472, 1945, 2057, 2267
BsmAI GTCTC 6 cut(s) 280, 446, 476, 529, 1066, 2014
BsmBI CGTCTC 2 cut(s) 446, 476
BsmFI GGGAC 1 cut(s) 1729
BsmI GAATGC 1 cut(s) 959
BsnI GGCC 3 cut(s) 119, 479, 1106
Bsp119I TTCGAA 1 cut(s) 508
Bsp1286I GDGCHC 2 cut(s) 94, 1480
Bsp143I GATC 7 cut(s) 427, 525, 637, 1096, 1929, 2178, 2194
BspACI CCGC 6 cut(s) 116, 628, 2030, 2141, 2186, 2235
BspANI GGCC 3 cut(s) 119, 479, 1106
BspCNI CTCAG 7 cut(s) 868, 1446, 1492, 1660, 1696, 2161, 2251
BspFNI CGCG 1 cut(s) 1041
BspLI GGNNCC 5 cut(s) 120, 1140, 2062, 2145, 2233
BspMAI CTGCAG 2 cut(s) 110, 2001
BspPI GGATC 3 cut(s) 435, 520, 645
BspT104I TTCGAA 1 cut(s) 508
BspT107I GGYRCC 2 cut(s) 1138, 2231
BsrBI CCGCTC 1 cut(s) 2237
BsrDI GCAATG 3 cut(s) 783, 1503, 2159
BsrFI RCCGGY 1 cut(s) 1135
BsrI ACTGG 6 cut(s) 468, 615, 1285, 1513, 1783, 2021
BssAI RCCGGY 1 cut(s) 1135
BssECI CCNNGG 2 cut(s) 402, 1551
BssMI GATC 7 cut(s) 427, 525, 637, 1096, 1929, 2178, 2194
BssNAI GTATAC 1 cut(s) 2252
BssNI GRCGYC 2 cut(s) 275, 2232
BssT1I CCWWGG 1 cut(s) 1551
Bst1107I GTATAC 1 cut(s) 2252
Bst2UI CCWGG 1 cut(s) 404
Bst4CI ACNGT 3 cut(s) 67, 246, 2047
Bst6I CTCTTC 3 cut(s) 683, 735, 2088
BstACI GRCGYC 2 cut(s) 275, 2232
BstAPI GCANNNNNTGC 2 cut(s) 105, 307
BstBAI YACGTR 2 cut(s) 95, 2005
BstBI TTCGAA 1 cut(s) 508
BstC8I GCNNGC 1 cut(s) 10
BstF5I GGATG 3 cut(s) 1365, 1498, 1644
BstFNI CGCG 1 cut(s) 1041
BstH2I RGCGCY 1 cut(s) 2235
BstHHI GCGC 1 cut(s) 2234
BstKTI GATC 7 cut(s) 430, 528, 640, 1099, 1932, 2181, 2197
BstMAI GTCTC 6 cut(s) 280, 446, 476, 529, 1066, 2014
BstMBI GATC 7 cut(s) 427, 525, 637, 1096, 1929, 2178, 2194
BstMCI CGRYCG 1 cut(s) 386
BstMWI GCNNNNNNNGC 3 cut(s) 105, 307, 2039
BstNI CCWGG 1 cut(s) 404
BstNSI RCATGY 2 cut(s) 602, 1472
BstSCI CCNGG 2 cut(s) 402, 1792
BstSFI CTRYAG 3 cut(s) 106, 1997, 2136
BstSLI GKGCMC 1 cut(s) 94
BstUI CGCG 1 cut(s) 1041
BstV1I GCAGC 7 cut(s) 120, 1459, 1747, 1903, 2011, 2088, 2122
BstX2I RGATCY 2 cut(s) 637, 2194
BstYI RGATCY 2 cut(s) 637, 2194
BstZ17I GTATAC 1 cut(s) 2252
BsuRI GGCC 3 cut(s) 119, 479, 1106
BtrI CACGTC 1 cut(s) 469
BtsCI GGATG 3 cut(s) 1365, 1498, 1644
BtsIMutI CAGTG 1 cut(s) 1520
Cac8I GCNNGC 1 cut(s) 10
CaiI CAGNNNCTG 1 cut(s) 1453
CfoI GCGC 1 cut(s) 2234
Cfr10I RCCGGY 1 cut(s) 1135
Cfr13I GGNCC 4 cut(s) 118, 246, 406, 1796
CpoI CGGWCCG 1 cut(s) 246
CseI GACGC 1 cut(s) 264
Csp6I GTAC 4 cut(s) 251, 1133, 1764, 2271
CspCI CAANNNNNGTGG 2 cut(s) 111, 146
CspI CGGWCCG 1 cut(s) 246
CviAII CATG 8 cut(s) 358, 367, 599, 1067, 1268, 1469, 1816, 1927
CviQI GTAC 4 cut(s) 251, 1133, 1764, 2271
DinI GGCGCC 1 cut(s) 2233
DpnI GATC 7 cut(s) 429, 527, 639, 1098, 1931, 2180, 2196
DpnII GATC 7 cut(s) 427, 525, 637, 1096, 1929, 2178, 2194
DraI TTTAAA 1 cut(s) 619
Eam1104I CTCTTC 3 cut(s) 683, 735, 2088
EarI CTCTTC 3 cut(s) 683, 735, 2088
Ecl136II GAGCTC 1 cut(s) 1478
Eco130I CCWWGG 1 cut(s) 1551
Eco24I GRGCYC 1 cut(s) 1480
Eco47I GGWCC 3 cut(s) 246, 406, 1796
Eco53kI GAGCTC 1 cut(s) 1478
Eco57I CTGAAG 2 cut(s) 974, 2009
Eco72I CACGTG 1 cut(s) 95
EcoICRI GAGCTC 1 cut(s) 1478
EcoRI GAATTC 1 cut(s) 1546
EcoRII CCWGG 1 cut(s) 402
EcoT14I CCWWGG 1 cut(s) 1551
EcoT38I GRGCYC 1 cut(s) 1480
EgeI GGCGCC 1 cut(s) 2233
EheI GGCGCC 1 cut(s) 2233
ErhI CCWWGG 1 cut(s) 1551
Esp3I CGTCTC 2 cut(s) 446, 476
FaeI CATG 8 cut(s) 361, 370, 602, 1070, 1271, 1472, 1819, 1930
FalI AAGNNNNNCTT 3 cut(s) 33, 689, 721
FaqI GGGAC 1 cut(s) 1729
FatI CATG 8 cut(s) 357, 366, 598, 1066, 1267, 1468, 1815, 1926
FbaI TGATCA 1 cut(s) 1929
FblI GTMKAC 3 cut(s) 386, 1952, 2251
FokI GGATG 3 cut(s) 1372, 1505, 1651
FriOI GRGCYC 1 cut(s) 1480
FspBI CTAG 4 cut(s) 125, 1196, 1580, 1664
GlaI GCGC 1 cut(s) 2233
GsuI CTGGAG 4 cut(s) 632, 1494, 1967, 2038
HaeII RGCGCY 1 cut(s) 2235
HaeIII GGCC 3 cut(s) 119, 479, 1106
HapII CCGG 2 cut(s) 1136, 1794
HgaI GACGC 1 cut(s) 264
HhaI GCGC 1 cut(s) 2234
Hin1I GRCGYC 2 cut(s) 275, 2232
Hin1II CATG 8 cut(s) 361, 370, 602, 1070, 1271, 1472, 1819, 1930
Hin6I GCGC 1 cut(s) 2232
HinP1I GCGC 1 cut(s) 2232
HincII GTYRAC 3 cut(s) 333, 387, 1953
HindII GTYRAC 3 cut(s) 333, 387, 1953
HindIII AAGCTT 2 cut(s) 839, 1628
HpaII CCGG 2 cut(s) 1136, 1794
HphI GGTGA 4 cut(s) 796, 1406, 1455, 1495
Hpy166II GTNNAC 7 cut(s) 70, 177, 333, 387, 1891, 1953, 2252
Hpy188III TCNNGA 8 cut(s) 416, 431, 641, 834, 1013, 1664, 1714, 1946
Hpy8I GTNNAC 7 cut(s) 70, 177, 333, 387, 1891, 1953, 2252
Hpy99I CGWCG 3 cut(s) 280, 331, 1957
HpyAV CCTTC 9 cut(s) 469, 691, 724, 787, 817, 849, 1081, 1777, 2163
HpyCH4III ACNGT 3 cut(s) 67, 246, 2047
HpyCH4IV ACGT 5 cut(s) 94, 326, 468, 2004, 2068
HpyF10VI GCNNNNNNNGC 3 cut(s) 105, 307, 2039
HpySE526I ACGT 5 cut(s) 94, 326, 468, 2004, 2068
Hsp92I GRCGYC 2 cut(s) 275, 2232
Hsp92II CATG 8 cut(s) 361, 370, 602, 1070, 1271, 1472, 1819, 1930
HspAI GCGC 1 cut(s) 2232
KasI GGCGCC 1 cut(s) 2231
Ksp22I TGATCA 1 cut(s) 1929
Kzo9I GATC 7 cut(s) 427, 525, 637, 1096, 1929, 2178, 2194
LmnI GCTCC 3 cut(s) 298, 502, 1475
Lsp1109I GCAGC 7 cut(s) 120, 1459, 1747, 1903, 2011, 2088, 2122
LweI GCATC 4 cut(s) 994, 1350, 1483, 1973
MaeI CTAG 4 cut(s) 125, 1196, 1580, 1664
MaeII ACGT 5 cut(s) 94, 326, 468, 2004, 2068
MaeIII GTNAC 7 cut(s) 563, 993, 1276, 1411, 1778, 1863, 2211
MalI GATC 7 cut(s) 429, 527, 639, 1098, 1931, 2180, 2196
MbiI CCGCTC 1 cut(s) 2237
MboI GATC 7 cut(s) 427, 525, 637, 1096, 1929, 2178, 2194
MfeI CAATTG 2 cut(s) 290, 752
MflI RGATCY 2 cut(s) 637, 2194
MhlI GDGCHC 2 cut(s) 94, 1480
Mly113I GGCGCC 1 cut(s) 2232
MlyI GAGTC 6 cut(s) 127, 566, 571, 686, 1711, 1958
MmeI TCCRAC 5 cut(s) 258, 402, 1156, 1332, 1732
MroXI GAANNNNTTC 1 cut(s) 629
MseI TTAA 8 cut(s) 351, 587, 618, 767, 1238, 1250, 1775, 1923
MspA1I CMGCKG 1 cut(s) 1738
MspI CCGG 2 cut(s) 1136, 1794
MspR9I CCNGG 2 cut(s) 404, 1794
MunI CAATTG 2 cut(s) 290, 752
Mva1269I GAATGC 1 cut(s) 959
MvaI CCWGG 1 cut(s) 404
MvnI CGCG 1 cut(s) 1041
MwoI GCNNNNNNNGC 3 cut(s) 105, 307, 2039
NarI GGCGCC 1 cut(s) 2232
NciI CCSGG 1 cut(s) 1794
NdeII GATC 7 cut(s) 427, 525, 637, 1096, 1929, 2178, 2194
NlaIII CATG 8 cut(s) 361, 370, 602, 1070, 1271, 1472, 1819, 1930
NlaIV GGNNCC 5 cut(s) 120, 1140, 2062, 2145, 2233
NmeAIII GCCGAG 1 cut(s) 505
NmuCI GTSAC 4 cut(s) 563, 993, 1276, 1778
NspI RCATGY 2 cut(s) 602, 1472
NspV TTCGAA 1 cut(s) 508
PciI ACATGT 1 cut(s) 598
PcsI WCGNNNNNNNCGW 3 cut(s) 170, 388, 436
PctI GAATGC 1 cut(s) 959
PdmI GAANNNNTTC 1 cut(s) 629
PfeI GAWTC 8 cut(s) 148, 441, 748, 925, 1055, 1187, 1244, 1458
PflMI CCANNNNNTGG 2 cut(s) 1472, 1945
PfoI TCCNGGA 1 cut(s) 1792
PleI GAGTC 6 cut(s) 127, 566, 570, 685, 1711, 1957
PluTI GGCGCC 1 cut(s) 2235
PmaCI CACGTG 1 cut(s) 95
PmlI CACGTG 1 cut(s) 95
PpsI GAGTC 6 cut(s) 127, 566, 570, 685, 1711, 1957
Ppu21I YACGTR 2 cut(s) 95, 2005
PscI ACATGT 1 cut(s) 598
Psp124BI GAGCTC 1 cut(s) 1480
Psp6I CCWGG 1 cut(s) 402
PspCI CACGTG 1 cut(s) 95
PspGI CCWGG 1 cut(s) 402
PspN4I GGNNCC 5 cut(s) 120, 1140, 2062, 2145, 2233
PspPI GGNCC 4 cut(s) 118, 246, 406, 1796
PstI CTGCAG 2 cut(s) 110, 2001
PstNI CAGNNNCTG 1 cut(s) 1453
PsuI RGATCY 2 cut(s) 637, 2194
PvuII CAGCTG 1 cut(s) 1738
RsaI GTAC 4 cut(s) 252, 1134, 1765, 2272
RsaNI GTAC 4 cut(s) 251, 1133, 1764, 2271
Rsr2I CGGWCCG 1 cut(s) 246
RsrII CGGWCCG 1 cut(s) 246
SacI GAGCTC 1 cut(s) 1480
SalI GTCGAC 2 cut(s) 385, 1951
SaqAI TTAA 8 cut(s) 351, 587, 618, 767, 1238, 1250, 1775, 1923
Sau3AI GATC 7 cut(s) 427, 525, 637, 1096, 1929, 2178, 2194
Sau96I GGNCC 4 cut(s) 118, 246, 406, 1796
SchI GAGTC 6 cut(s) 127, 566, 571, 686, 1711, 1958
ScrFI CCNGG 2 cut(s) 404, 1794
SduI GDGCHC 2 cut(s) 94, 1480
SfaNI GCATC 4 cut(s) 994, 1350, 1483, 1973
SfcI CTRYAG 3 cut(s) 106, 1997, 2136
SfoI GGCGCC 1 cut(s) 2233
SfuI TTCGAA 1 cut(s) 508
SinI GGWCC 3 cut(s) 246, 406, 1796
SmlI CTYRAG 4 cut(s) 515, 578, 641, 1295
SmoI CTYRAG 4 cut(s) 515, 578, 641, 1295
SsiI CCGC 6 cut(s) 116, 628, 2030, 2141, 2186, 2235
SspDI GGCGCC 1 cut(s) 2231
SspI AATATT 1 cut(s) 1382
SspMI CTAG 4 cut(s) 125, 1196, 1580, 1664
SstI GAGCTC 1 cut(s) 1480
StyD4I CCNGG 2 cut(s) 402, 1792
StyI CCWWGG 1 cut(s) 1551
TaaI ACNGT 3 cut(s) 67, 246, 2047
TaiI ACGT 5 cut(s) 97, 329, 471, 2007, 2071
TaqI TCGA 8 cut(s) 386, 508, 833, 928, 999, 1170, 1952, 1993
TaqII GACCGA 1 cut(s) 372
TauI GCSGC 3 cut(s) 119, 2033, 2237
TfiI GAWTC 8 cut(s) 148, 441, 748, 925, 1055, 1187, 1244, 1458
Tru1I TTAA 8 cut(s) 351, 587, 618, 767, 1238, 1250, 1775, 1923
Tru9I TTAA 8 cut(s) 351, 587, 618, 767, 1238, 1250, 1775, 1923
TscAI CASTG 1 cut(s) 1520
TseFI GTSAC 4 cut(s) 563, 993, 1276, 1778
TseI GCWGC 7 cut(s) 108, 1447, 1735, 1916, 1999, 2076, 2110
Tsp45I GTSAC 4 cut(s) 563, 993, 1276, 1778
TspGWI ACGGA 4 cut(s) 162, 238, 500, 1970
TspRI CASTG 1 cut(s) 1520
Van91I CCANNNNNTGG 2 cut(s) 1472, 1945
VpaK11BI GGWCC 3 cut(s) 246, 406, 1796
XapI RAATTY 8 cut(s) 394, 1024, 1261, 1546, 1557, 1980, 2035, 2166
XbaI TCTAGA 1 cut(s) 1663
XceI RCATGY 2 cut(s) 602, 1472
XmiI GTMKAC 3 cut(s) 386, 1952, 2251
XmnI GAANNNNTTC 1 cut(s) 629
XspI CTAG 4 cut(s) 125, 1196, 1580, 1664
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.