pycom11g05350

Frigida-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0000126
Physical Location & Seq
Forward (+)
4117772 .. 4119751
1980 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g05350.1

Sequence Viewer

Length: 1854 bp
ATGTCGTTTTCGTTTAGTGTTTATGTGGCAGAGACGATGGAGAAGAAGATAGAGTGCGCTTTGAAAGAATCAGAGTCGAAGCAGAGTCGTTTGAGCAAGGCGTACGGTTGCCTTCGCGCCCAAGCAACCTCCCTCGCCATGTTTTCGGTACAGTGGAAGGAACTCGAGGACCACTTAGCGTCCACCCGCCAGTCCATCGAGGCCAGATTCCGGGAGCTCAAGAACCGCGAGGAGGAAGTTGGAATCCGCAACGAGCAGTTGGAAATCGAAGAGTCGAAGCTCAATTCACAGATGGAGTCAAAGTCCAAGGAATTAAGCGTGCTTGAGGAATTGATTGTAGAGAGTAGGAACCGCTTGCGCTCGCTTGAATCATTGATCAAAGAACACAACGGCGAGGTTGGTATTAAGGAGGAGAGATTGGAGGAAGTGGAGAATTCTGTGAGGGAGAAGGAGAGGGAATTGAATGAGATTCTGGGGTCGATTGAGGCGAGTACGGGGGAGTTTGATTTGAGAGAGGAGGAATTGAATTTGGTGCTAAGGTTGATCGACGAATGTGGCAAAGAGTTGGAAGTCAAAGAGGAGAAGCTTAGTTTGATTAAGCAATCATTAGTAGAGCGTTCGAATGAACTCGAATCGAGAGAAGCGTTGATTAGGGAAGTAGATTTGAAGGAGAGAGAAGTTTGCTTACGTGAGAAGGCACTGGAGGAGTGGTCATGTAAGCTTGAACTGAAAGTGAGGGAGCTTGAATTGAAAGAGAAGCAAATCGAAGAATCGAAACAAGAAGGTGAGAAGTATTTGGATGCAGTCTCCAGGGAACTTCAAGGGAAAGAGAGCCAACTGCAAGGGAAAGAGAGTTTACTGCAGAGGAAAGAGAGCCAACTTCAGCAGCAGTCCAGAGAGCTTAAGCAGAAGGACTTTATCAAGAAAATCGATGAAGAACATGCCGAAACCTTAAAGTCGAAAGAGAGGCAAATAGAAGATCAGGCCAAAGAGATTGAGTTAAAGCACAAAGAAATTGATTCGATGAAGAAATGCGCTGAAGAACATTCCGAAAACCTCAAATCAAAAGACAGGCAACTTGAAGATCTGGAGAAACAAATTGATTCGATCAAAAAATCCGCTGAAGAACATACCCAAAACCTGAACACGAAGGAGAAGCAACTTGAAGATCAGGCCAAAGAGCTTGCATTGAAGCAGAAAGAAATTGATTCGATAAAAAAATCCATTGAAGAACATACCCAAAACCTGAACAAGAAAGAGAGGCAACTTGAAGATCAGGTCAAAGAGCTTGCGTTGAAGCAGAAAGAAATTGATTCGATCAAAAAATCAGCTGAAGAACGTACCCAAAACCTGAACACGAAAGAGAGGCAACTTGAAGAGCAGGCCAAAGAGCTTGTAATGAAGCAGAAATCAATCGATTCAATAAAAAAAGGCGCTGAAAAACAGACCCAAATCCTGACATCGATAGAGAGGCAACTTGATCACCGGGCGAAAGAGCTTGCAATGAAGCAGAAAGAATTGGAACATACTAATCAATCCATCATCAATAGGGATGGTACAGGTGCGAAGCGTAGTACCGACACTTTTGACCCCAGCTGGTATCAAGAGCAACAACAGCACAAAAGCAAGTATCCTCGGACATGTGAATCAGCTGCTACACCTTTTCCAGTGCCAAGCTTCACCCCAGTCTATCCGCGGCCAAACCCGTCATCTTGGCAGTATGAAAATTATGGACACTACGGGCATTCTGGTACAGCTGCCAACAACTGTGAGTTTGGTGATAGTTTTGGTCACAGTTTTGGTGGCAGTTACCGTGCAATACCGAATCCTGGGGTACATTGCCCACTGACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Frigida

Protein Analysis

618

Amino Acids

71.74

Weight (kDa)

5.46

Isoelectric Point (pI)

56.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 3 cut(s) 117, 228, 1696
AciI CCGC 7 cut(s) 187, 226, 247, 352, 1119, 1694, 1696
AcoI YGGCCR 1 cut(s) 1697
AcsI RAATTY 2 cut(s) 433, 526
AcuI CTGAAG 4 cut(s) 866, 1059, 1143, 1353
AfaI GTAC 8 cut(s) 104, 150, 493, 1342, 1558, 1576, 1753, 1836
AfiI CCNNNNNNNGG 3 cut(s) 210, 232, 1829
AflII CTTAAG 1 cut(s) 902
AflIII ACRYGT 1 cut(s) 1640
AjnI CCWGG 2 cut(s) 809, 1828
Alw21I GWGCWC 1 cut(s) 219
Alw26I GTCTC 2 cut(s) 26, 811
Ama87I CYCGRG 1 cut(s) 164
AoxI GGCC 5 cut(s) 201, 984, 1173, 1383, 1697
ApeKI GCWGC 3 cut(s) 886, 1652, 1757
ApoI RAATTY 2 cut(s) 433, 526
AspLEI GCGC 5 cut(s) 59, 119, 360, 1037, 1436
AspS9I GGNCC 1 cut(s) 169
AsuC2I CCSGG 2 cut(s) 212, 1487
AsuHPI GGTGA 4 cut(s) 797, 1475, 1672, 1790
AsuII TTCGAA 1 cut(s) 620
AvaI CYCGRG 1 cut(s) 164
AvaII GGWCC 1 cut(s) 169
BanII GRGCYC 1 cut(s) 219
BarI GAAGNNNNNNTAC 2 cut(s) 669, 701
Bbv12I GWGCWC 1 cut(s) 219
BbvI GCAGC 3 cut(s) 898, 1639, 1744
BccI CCATC 5 cut(s) 31, 203, 286, 1547, 1547
BceAI ACGGC 1 cut(s) 406
BciT130I CCWGG 2 cut(s) 811, 1830
BciVI GTATCC 1 cut(s) 1641
BclI TGATCA 2 cut(s) 375, 1480
BcnI CCSGG 2 cut(s) 212, 1487
BcoDI GTCTC 2 cut(s) 26, 811
BfmI CTRYAG 1 cut(s) 860
BfoI RGCGCY 1 cut(s) 1437
BfrI CTTAAG 1 cut(s) 902
BfuI GTATCC 1 cut(s) 1641
BglII AGATCT 1 cut(s) 1084
BisI GCNGC 4 cut(s) 887, 1653, 1697, 1758
BlsI GCNGC 4 cut(s) 888, 1654, 1698, 1759
Bme1390I CCNGG 4 cut(s) 212, 811, 1487, 1830
Bme18I GGWCC 1 cut(s) 169
BmeT110I CYCGRG 1 cut(s) 164
BmgT120I GGNCC 1 cut(s) 169
BmiI GGNNCC 1 cut(s) 350
BmrFI CCNGG 4 cut(s) 212, 811, 1487, 1830
BmrI ACTGGG 1 cut(s) 1679
BmsI GCATC 1 cut(s) 790
BmuI ACTGGG 1 cut(s) 1679
BpmI CTGGAG 3 cut(s) 722, 793, 1109
Bpu10I CCTNAGC 1 cut(s) 536
Bpu14I TTCGAA 1 cut(s) 620
BpuEI CTTGAG 2 cut(s) 203, 344
BpuMI CCSGG 2 cut(s) 212, 1487
Bsa29I ATCGAT 3 cut(s) 930, 1416, 1463
BsaAI YACGTR 1 cut(s) 689
BsaJI CCNNGG 5 cut(s) 306, 810, 1634, 1694, 1829
BsaXI ACNNNNNCTCC 4 cut(s) 287, 317, 695, 725
Bsc4I CCNNNNNNNGG 3 cut(s) 210, 232, 1829
Bse1I ACTGG 4 cut(s) 190, 705, 1667, 1685
Bse3DI GCAATG 2 cut(s) 1509, 1837
BseBI CCWGG 2 cut(s) 811, 1830
BseCI ATCGAT 3 cut(s) 930, 1416, 1463
BseDI CCNNGG 5 cut(s) 306, 810, 1634, 1694, 1829
BseGI GGATG 2 cut(s) 805, 1558
BseLI CCNNNNNNNGG 3 cut(s) 210, 232, 1829
BseMI GCAATG 2 cut(s) 1509, 1837
BseNI ACTGG 4 cut(s) 190, 705, 1667, 1685
BseRI GAGGAG 5 cut(s) 245, 425, 530, 593, 719
BseXI GCAGC 3 cut(s) 898, 1639, 1744
BseYI CCCAGC 1 cut(s) 1592
Bsh1236I CGCG 3 cut(s) 117, 228, 1696
BshFI GGCC 5 cut(s) 203, 986, 1175, 1385, 1699
BshVI ATCGAT 3 cut(s) 930, 1416, 1463
BsiHKAI GWGCWC 1 cut(s) 219
BsiHKCI CYCGRG 1 cut(s) 164
BsiSI CCGG 2 cut(s) 211, 1486
BsiWI CGTACG 1 cut(s) 102
BslI CCNNNNNNNGG 3 cut(s) 210, 232, 1829
BsmAI GTCTC 2 cut(s) 26, 811
BsmBI CGTCTC 1 cut(s) 26
BsmI GAATGC 1 cut(s) 1744
BsnI GGCC 5 cut(s) 203, 986, 1175, 1385, 1699
BsoBI CYCGRG 1 cut(s) 164
Bsp119I TTCGAA 1 cut(s) 620
Bsp1286I GDGCHC 1 cut(s) 219
Bsp143I GATC 9 cut(s) 375, 543, 979, 1084, 1107, 1168, 1273, 1317, 1480
BspACI CCGC 7 cut(s) 187, 226, 247, 352, 1119, 1694, 1696
BspANI GGCC 5 cut(s) 203, 986, 1175, 1385, 1699
BspDI ATCGAT 3 cut(s) 930, 1416, 1463
BspFNI CGCG 3 cut(s) 117, 228, 1696
BspLI GGNNCC 1 cut(s) 350
BspMAI CTGCAG 1 cut(s) 864
BspQI GCTCTTC 1 cut(s) 1371
BspT104I TTCGAA 1 cut(s) 620
BspTI CTTAAG 1 cut(s) 902
BsrDI GCAATG 2 cut(s) 1509, 1837
BsrI ACTGG 4 cut(s) 190, 705, 1667, 1685
BssECI CCNNGG 5 cut(s) 306, 810, 1634, 1694, 1829
BssMI GATC 9 cut(s) 375, 543, 979, 1084, 1107, 1168, 1273, 1317, 1480
BssT1I CCWWGG 1 cut(s) 306
Bst2UI CCWGG 2 cut(s) 811, 1830
Bst4CI ACNGT 5 cut(s) 107, 153, 1769, 1796, 1814
Bst6I CTCTTC 2 cut(s) 264, 1371
BstAFI CTTAAG 1 cut(s) 902
BstBAI YACGTR 1 cut(s) 689
BstBI TTCGAA 1 cut(s) 620
BstC8I GCNNGC 7 cut(s) 320, 356, 362, 1185, 1290, 1383, 1500
BstDEI CTNAG 3 cut(s) 175, 536, 587
BstDSI CCRYGG 1 cut(s) 1694
BstF5I GGATG 2 cut(s) 805, 1558
BstFNI CGCG 3 cut(s) 117, 228, 1696
BstH2I RGCGCY 1 cut(s) 1437
BstHHI GCGC 5 cut(s) 59, 119, 360, 1037, 1436
BstKTI GATC 9 cut(s) 378, 546, 982, 1087, 1110, 1171, 1276, 1320, 1483
BstMAI GTCTC 2 cut(s) 26, 811
BstMBI GATC 9 cut(s) 375, 543, 979, 1084, 1107, 1168, 1273, 1317, 1480
BstMWI GCNNNNNNNGC 1 cut(s) 1615
BstNI CCWGG 2 cut(s) 811, 1830
BstNSI RCATGY 2 cut(s) 944, 1644
BstSCI CCNGG 4 cut(s) 210, 809, 1485, 1828
BstSFI CTRYAG 1 cut(s) 860
BstUI CGCG 3 cut(s) 117, 228, 1696
BstV1I GCAGC 3 cut(s) 898, 1639, 1744
BstX2I RGATCY 1 cut(s) 1084
BstYI RGATCY 1 cut(s) 1084
Bsu15I ATCGAT 3 cut(s) 930, 1416, 1463
BsuI GTATCC 1 cut(s) 1641
BsuRI GGCC 5 cut(s) 203, 986, 1175, 1385, 1699
BsuTUI ATCGAT 3 cut(s) 930, 1416, 1463
BtgI CCRYGG 1 cut(s) 1694
BtsCI GGATG 2 cut(s) 805, 1558
BtsIMutI CAGTG 4 cut(s) 158, 698, 1674, 1844
Cac8I GCNNGC 7 cut(s) 320, 356, 362, 1185, 1290, 1383, 1500
CfoI GCGC 5 cut(s) 59, 119, 360, 1037, 1436
Cfr13I GGNCC 1 cut(s) 169
Cfr42I CCGCGG 1 cut(s) 1697
ClaI ATCGAT 3 cut(s) 930, 1416, 1463
CseI GACGC 1 cut(s) 168
Csp6I GTAC 8 cut(s) 103, 149, 492, 1341, 1557, 1575, 1752, 1835
CviAII CATG 4 cut(s) 139, 714, 941, 1641
CviQI GTAC 8 cut(s) 103, 149, 492, 1341, 1557, 1575, 1752, 1835
DdeI CTNAG 3 cut(s) 175, 536, 587
DpnI GATC 9 cut(s) 377, 545, 981, 1086, 1109, 1170, 1275, 1319, 1482
DpnII GATC 9 cut(s) 375, 543, 979, 1084, 1107, 1168, 1273, 1317, 1480
EaeI YGGCCR 1 cut(s) 1697
Eam1104I CTCTTC 2 cut(s) 264, 1371
EarI CTCTTC 2 cut(s) 264, 1371
Ecl136II GAGCTC 1 cut(s) 217
Eco130I CCWWGG 1 cut(s) 306
Eco24I GRGCYC 1 cut(s) 219
Eco47I GGWCC 1 cut(s) 169
Eco53kI GAGCTC 1 cut(s) 217
Eco57I CTGAAG 4 cut(s) 866, 1059, 1143, 1353
Eco88I CYCGRG 1 cut(s) 164
EcoICRI GAGCTC 1 cut(s) 217
EcoRI GAATTC 1 cut(s) 433
EcoRII CCWGG 2 cut(s) 809, 1828
EcoT14I CCWWGG 1 cut(s) 306
EcoT38I GRGCYC 1 cut(s) 219
ErhI CCWWGG 1 cut(s) 306
Esp3I CGTCTC 1 cut(s) 26
FaeI CATG 4 cut(s) 142, 717, 944, 1644
FatI CATG 4 cut(s) 138, 713, 940, 1640
FauI CCCGC 1 cut(s) 194
FbaI TGATCA 2 cut(s) 375, 1480
Fnu4HI GCNGC 4 cut(s) 887, 1653, 1697, 1758
FokI GGATG 2 cut(s) 812, 1565
FriOI GRGCYC 1 cut(s) 219
Fsp4HI GCNGC 4 cut(s) 887, 1653, 1697, 1758
GlaI GCGC 5 cut(s) 58, 118, 359, 1036, 1435
GluI GCNGC 4 cut(s) 887, 1653, 1697, 1758
GsaI CCCAGC 1 cut(s) 1596
GsuI CTGGAG 3 cut(s) 722, 793, 1109
HaeII RGCGCY 1 cut(s) 1437
HaeIII GGCC 5 cut(s) 203, 986, 1175, 1385, 1699
HapII CCGG 2 cut(s) 211, 1486
HgaI GACGC 1 cut(s) 168
HhaI GCGC 5 cut(s) 59, 119, 360, 1037, 1436
Hin1II CATG 4 cut(s) 142, 717, 944, 1644
Hin6I GCGC 5 cut(s) 57, 117, 358, 1035, 1434
HinP1I GCGC 5 cut(s) 57, 117, 358, 1035, 1434
HindIII AAGCTT 3 cut(s) 584, 719, 1675
HpaII CCGG 2 cut(s) 211, 1486
HphI GGTGA 4 cut(s) 797, 1475, 1672, 1790
Hpy166II GTNNAC 2 cut(s) 183, 857
Hpy188I TCNGA 3 cut(s) 73, 1051, 1638
Hpy188III TCNNGA 7 cut(s) 220, 636, 894, 922, 1088, 1456, 1604
Hpy8I GTNNAC 2 cut(s) 183, 857
Hpy99I CGWCG 1 cut(s) 551
HpyAV CCTTC 8 cut(s) 122, 151, 442, 661, 688, 776, 904, 1144
HpyCH4III ACNGT 5 cut(s) 107, 153, 1769, 1796, 1814
HpyCH4IV ACGT 2 cut(s) 688, 1339
HpyCH4V TGCA 6 cut(s) 803, 841, 862, 1187, 1502, 1817
HpyF10VI GCNNNNNNNGC 1 cut(s) 1615
HpyF3I CTNAG 3 cut(s) 175, 536, 587
HpySE526I ACGT 2 cut(s) 688, 1339
Hsp92II CATG 4 cut(s) 142, 717, 944, 1644
HspAI GCGC 5 cut(s) 57, 117, 358, 1035, 1434
Ksp22I TGATCA 2 cut(s) 375, 1480
KspI CCGCGG 1 cut(s) 1697
Kzo9I GATC 9 cut(s) 375, 543, 979, 1084, 1107, 1168, 1273, 1317, 1480
LguI GCTCTTC 1 cut(s) 1371
LmnI GCTCC 2 cut(s) 214, 739
Lsp1109I GCAGC 3 cut(s) 898, 1639, 1744
LweI GCATC 1 cut(s) 790
MaeII ACGT 2 cut(s) 688, 1339
MaeIII GTNAC 2 cut(s) 1790, 1808
MalI GATC 9 cut(s) 377, 545, 981, 1086, 1109, 1170, 1275, 1319, 1482
MboI GATC 9 cut(s) 375, 543, 979, 1084, 1107, 1168, 1273, 1317, 1480
MflI RGATCY 1 cut(s) 1084
MhlI GDGCHC 1 cut(s) 219
MlyI GAGTC 4 cut(s) 83, 94, 281, 305
MmeI TCCRAC 3 cut(s) 220, 240, 546
MseI TTAA 6 cut(s) 314, 405, 597, 903, 953, 1001
MspA1I CMGCKG 6 cut(s) 1121, 1331, 1596, 1652, 1696, 1757
MspCI CTTAAG 1 cut(s) 902
MspI CCGG 2 cut(s) 211, 1486
MspR9I CCNGG 4 cut(s) 212, 811, 1487, 1830
Mva1269I GAATGC 1 cut(s) 1744
MvaI CCWGG 2 cut(s) 811, 1830
MvnI CGCG 3 cut(s) 117, 228, 1696
MwoI GCNNNNNNNGC 1 cut(s) 1615
NciI CCSGG 2 cut(s) 212, 1487
NdeII GATC 9 cut(s) 375, 543, 979, 1084, 1107, 1168, 1273, 1317, 1480
NlaIII CATG 4 cut(s) 142, 717, 944, 1644
NlaIV GGNNCC 1 cut(s) 350
NmuCI GTSAC 1 cut(s) 1790
NspI RCATGY 2 cut(s) 944, 1644
NspV TTCGAA 1 cut(s) 620
PaeR7I CTCGAG 1 cut(s) 164
PciI ACATGT 1 cut(s) 1640
PciSI GCTCTTC 1 cut(s) 1371
PcsI WCGNNNNNNNCGW 2 cut(s) 485, 641
PctI GAATGC 1 cut(s) 1744
Pfl23II CGTACG 1 cut(s) 102
PfoI TCCNGGA 1 cut(s) 210
PkrI GCNGC 4 cut(s) 888, 1654, 1698, 1759
PleI GAGTC 4 cut(s) 82, 93, 280, 304
PpsI GAGTC 4 cut(s) 82, 93, 280, 304
Ppu21I YACGTR 1 cut(s) 689
PscI ACATGT 1 cut(s) 1640
Psp124BI GAGCTC 1 cut(s) 219
Psp6I CCWGG 2 cut(s) 809, 1828
PspFI CCCAGC 1 cut(s) 1592
PspGI CCWGG 2 cut(s) 809, 1828
PspLI CGTACG 1 cut(s) 102
PspN4I GGNNCC 1 cut(s) 350
PspPI GGNCC 1 cut(s) 169
PspXI VCTCGAGB 1 cut(s) 164
PstI CTGCAG 1 cut(s) 864
PsuI RGATCY 1 cut(s) 1084
PvuII CAGCTG 4 cut(s) 1331, 1596, 1652, 1757
RsaI GTAC 8 cut(s) 104, 150, 493, 1342, 1558, 1576, 1753, 1836
RsaNI GTAC 8 cut(s) 103, 149, 492, 1341, 1557, 1575, 1752, 1835
SacI GAGCTC 1 cut(s) 219
SacII CCGCGG 1 cut(s) 1697
SapI GCTCTTC 1 cut(s) 1371
SaqAI TTAA 6 cut(s) 314, 405, 597, 903, 953, 1001
SatI GCNGC 4 cut(s) 887, 1653, 1697, 1758
Sau3AI GATC 9 cut(s) 375, 543, 979, 1084, 1107, 1168, 1273, 1317, 1480
Sau96I GGNCC 1 cut(s) 169
SchI GAGTC 4 cut(s) 83, 94, 281, 305
ScrFI CCNGG 4 cut(s) 212, 811, 1487, 1830
SduI GDGCHC 1 cut(s) 219
SfaNI GCATC 1 cut(s) 790
SfcI CTRYAG 1 cut(s) 860
Sfr274I CTCGAG 1 cut(s) 164
Sfr303I CCGCGG 1 cut(s) 1697
SfuI TTCGAA 1 cut(s) 620
SgrBI CCGCGG 1 cut(s) 1697
SinI GGWCC 1 cut(s) 169
SlaI CTCGAG 1 cut(s) 164
SmlI CTYRAG 4 cut(s) 164, 218, 323, 902
SmoI CTYRAG 4 cut(s) 164, 218, 323, 902
SsiI CCGC 7 cut(s) 187, 226, 247, 352, 1119, 1694, 1696
SstI GAGCTC 1 cut(s) 219
StyD4I CCNGG 4 cut(s) 210, 809, 1485, 1828
StyI CCWWGG 1 cut(s) 306
TaaI ACNGT 5 cut(s) 107, 153, 1769, 1796, 1814
TaiI ACGT 2 cut(s) 691, 1342
TauI GCSGC 1 cut(s) 1699
Tru1I TTAA 6 cut(s) 314, 405, 597, 903, 953, 1001
Tru9I TTAA 6 cut(s) 314, 405, 597, 903, 953, 1001
TscAI CASTG 4 cut(s) 158, 705, 1674, 1851
TseFI GTSAC 1 cut(s) 1790
TseI GCWGC 3 cut(s) 886, 1652, 1757
Tsp45I GTSAC 1 cut(s) 1790
TspDTI ATGAA 6 cut(s) 639, 948, 1040, 1415, 1520, 1737
TspRI CASTG 4 cut(s) 158, 705, 1674, 1851
Vha464I CTTAAG 1 cut(s) 902
VpaK11BI GGWCC 1 cut(s) 169
XapI RAATTY 2 cut(s) 433, 526
XceI RCATGY 2 cut(s) 944, 1644
XhoI CTCGAG 1 cut(s) 164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.