Rmu_sc0005888.1_g000004

Frigida-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005888.1
OG0000126
Physical Location & Seq
Reverse (-)
18545 .. 22737
4193 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005888.1_g000004.1.cds

Sequence Viewer

Length: 2226 bp
atggtgatggtgaaaaggagggttgaggattgtgagagggaaatgaaggagaaagaggagaagctgagtttgattgagaaatcgaaagaggaaatgattggtgtggtggatttgaaaaggaaagagttctgtttgctgaagaaatcaatgggggagtggtgctgtaagattgaagtgaaggagagggagcttggaggatgggttgataagttggaatcgaaagagaaggaagttgaattgaaggttgaggagcttgatttgattcgtagcaagttccttgatgaggttcagttcaaagaaaagcatttggattcgcttgaaaaatcgttactagaatgggaggaggatctgcattccctccagaagtcggtacaagaatgttcccggggaagtgagatcattagggatggaagaggattgcagcagttcatggacgagcatctgaagagaattgattccatgggtactgaactgtcagcgattcttaaagagtcttcagacccggggaagttggttttggatgcaatgcaggggttttatgctgacaacagggagttagattttgaattgagagttagaagaagaagttgttgtcttttgttagaggagttgaggagaatctctccacaaatgaatccgcaagtgaaagaggatgcgatgaaactggctgctaattggaaagccaagatgacagtggcgagtgacaatgagttggaggtcttgggatttttgtggcttattgctgcttatgacttaacttctatctacgatgcgaaggagcttaaaaggcttctttctaaagtttcgcggggtgaacaagcagctcaaataggcctggcccttggtattccggcacctggaagccgcaacatttgttcccctgtcaaaattgaggaaccagaatcttctacggccaacaatgcagcaactatttcttctcctaatcctcaaacaagtgccaccacagatgcaagggattcacgggggtgtataaatgagactttgaattggaatgtagatacaatacagaatgaaatagtggcttctgttcaatcggcatcggacccagaagaacttgtgttgaagatgatgcaaaattctcttggcaaatactggacaagcacagaagatggtctgaaaaggcatgtcatgtcgtgtaatatttctctattaaagatgctaatgagagtctcaccacaagttggatctcacgtaaaagaagatgccaaaaagctaggactccaatggaaagcaaaaattagagctgatgctgaacatttggaacatcttttggagattgtggggtttttgctatttattgttgcatatggattgcttcctacactaaatggagatgagattgtaaagtttcttgagaagctttctcaatataaagaagctgtagaatcatgtcagatgcatggttttctagataagatccttgctgtttttattcagacactagtggaaaggaagcaactctttcaggctcttggatttgtctttaagttcaagttacgggacaagttcactccagtacgagtcttaaaagactatgtgaaggatgcaatgaagtgttggtcagaaactttgaagagaaagaaatcagttgatgaaaaggttgagtttttagacagcaaaatagctgcttttggaactgtgcttcgatgcatcaaagaatacaacctcgagtctgaatacccgtccagggaaattgcagtacaaataggtgagctggaaaaactaaaggagatttggagaagttcggcaaaacatcttgcctctgtcactagacagcaagagagtcaagggaagaaacgtagtagcagcacttgttcccctgcggttcaacaaggacaacagcagaaaagcaaattccatcggacagctgaagcagcccctagtccctataaatcaccaactttcacccctgtgcttctgcagtcaagaccatcatcatctttggcgtatggaaattatggacagcatgggcaggttggtgatatggctgccaactctagtgaagttgatagatcttcatctttggtgagtgaaattcatggacagcatgggcagtttggttatatggctgccaacttagctgaagttaatcctcgttttggtaccatagatgaaggtgatcctcattttggtgtacataatcttcctaacccttattcatccatggatttcaccttcttccctggccgttatggcccttattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Frigida

Protein Analysis

741

Amino Acids

83.98

Weight (kDa)

6.38

Isoelectric Point (pI)

51.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1984
Acc65I GGTACC 1 cut(s) 2123
AccB1I GGYRCC 2 cut(s) 853, 2123
AccB7I CCANNNNNTGG 1 cut(s) 1202
AccII CGCG 1 cut(s) 808
AciI CCGC 4 cut(s) 638, 808, 865, 1844
AclWI GGATC 4 cut(s) 354, 1213, 1432, 2135
AcoI YGGCCR 2 cut(s) 912, 2206
AcsI RAATTY 3 cut(s) 1096, 1874, 2055
AcuI CTGAAG 5 cut(s) 158, 464, 480, 1911, 2124
AfaI GTAC 6 cut(s) 372, 466, 1539, 1722, 2125, 2157
AfiI CCNNNNNNNGG 7 cut(s) 283, 367, 857, 1202, 1708, 2120, 2150
AhlI ACTAGT 1 cut(s) 1462
AjnI CCWGG 4 cut(s) 834, 856, 1706, 2203
AjuI GAANNNNNNNTTGG 2 cut(s) 500, 532
AleI CACNNNNGTG 2 cut(s) 985, 1931
Alw26I GTCTC 2 cut(s) 992, 1195
AlwI GGATC 4 cut(s) 354, 1213, 1432, 2135
Ama87I CYCGRG 3 cut(s) 384, 502, 1688
AoxI GGCC 5 cut(s) 832, 837, 912, 2206, 2215
ApoI RAATTY 3 cut(s) 1096, 1874, 2055
Asp700I GAANNNNTTC 2 cut(s) 125, 454
Asp718I GGTACC 1 cut(s) 2123
AspS9I GGNCC 3 cut(s) 838, 1063, 2216
AsuC2I CCSGG 4 cut(s) 385, 386, 503, 504
AvaI CYCGRG 3 cut(s) 384, 502, 1688
AvaII GGWCC 1 cut(s) 1063
BanI GGYRCC 2 cut(s) 853, 2123
BarI GAAGNNNNNNTAC 2 cut(s) 2148, 2180
BbsI GAAGAC 1 cut(s) 486
BccI CCATC 5 cut(s) 192, 401, 1124, 1887, 1960
BceAI ACGGC 2 cut(s) 927, 2193
BciT130I CCWGG 4 cut(s) 836, 858, 1708, 2205
BcnI CCSGG 4 cut(s) 385, 386, 503, 504
BcoDI GTCTC 2 cut(s) 992, 1195
BcuI ACTAGT 1 cut(s) 1462
BfaI CTAG 7 cut(s) 332, 1235, 1430, 1463, 1791, 1902, 2019
BfmI CTRYAG 2 cut(s) 1401, 1940
BfuAI ACCTGC 1 cut(s) 1984
BglI GCCNNNNNGGC 1 cut(s) 2214
BglII AGATCT 1 cut(s) 2033
Bme1390I CCNGG 8 cut(s) 385, 386, 503, 504, 836, 858, 1708, 2205
Bme18I GGWCC 1 cut(s) 1063
BmeT110I CYCGRG 3 cut(s) 384, 502, 1688
BmgT120I GGNCC 3 cut(s) 838, 1063, 2216
BmiI GGNNCC 4 cut(s) 855, 897, 1065, 2125
BmrFI CCNGG 8 cut(s) 385, 386, 503, 504, 836, 858, 1708, 2205
BpiI GAAGAC 1 cut(s) 486
BplI GAGNNNNNCTC 2 cut(s) 607, 639
BpmI CTGGAG 2 cut(s) 344, 1518
BpuEI CTTGAG 1 cut(s) 1394
BpuMI CCSGG 4 cut(s) 385, 386, 503, 504
BsaAI YACGTR 1 cut(s) 1213
BsaBI GATNNNNATC 1 cut(s) 2038
BsaJI CCNNGG 9 cut(s) 384, 385, 459, 502, 503, 841, 1707, 2184, 2203
BsaXI ACNNNNNCTCC 2 cut(s) 186, 216
Bsc4I CCNNNNNNNGG 7 cut(s) 283, 367, 857, 1202, 1708, 2120, 2150
Bse1I ACTGG 3 cut(s) 669, 1118, 1535
Bse3DI GCAATG 2 cut(s) 531, 1575
Bse8I GATNNNNATC 1 cut(s) 2038
BseBI CCWGG 4 cut(s) 836, 858, 1708, 2205
BseDI CCNNGG 9 cut(s) 384, 385, 459, 502, 503, 841, 1707, 2184, 2203
BseGI GGATG 6 cut(s) 203, 412, 526, 658, 1570, 2180
BseJI GATNNNNATC 1 cut(s) 2038
BseLI CCNNNNNNNGG 7 cut(s) 283, 367, 857, 1202, 1708, 2120, 2150
BseMI GCAATG 2 cut(s) 531, 1575
BseMII CTCAG 1 cut(s) 56
BseNI ACTGG 3 cut(s) 669, 1118, 1535
BseRI GAGGAG 5 cut(s) 71, 263, 356, 620, 628
Bsh1236I CGCG 1 cut(s) 808
BshFI GGCC 5 cut(s) 834, 839, 914, 2208, 2217
BshNI GGYRCC 2 cut(s) 853, 2123
BsiHKCI CYCGRG 3 cut(s) 384, 502, 1688
BsiSI CCGG 3 cut(s) 385, 503, 851
BslFI GGGAC 2 cut(s) 1535, 1890
BslI CCNNNNNNNGG 7 cut(s) 283, 367, 857, 1202, 1708, 2120, 2150
BsmAI GTCTC 2 cut(s) 992, 1195
BsmFI GGGAC 2 cut(s) 1535, 1890
BsmI GAATGC 1 cut(s) 352
BsnI GGCC 5 cut(s) 834, 839, 914, 2208, 2217
BsoBI CYCGRG 3 cut(s) 384, 502, 1688
Bsp1407I TGTACA 1 cut(s) 2155
Bsp143I GATC 6 cut(s) 346, 396, 1205, 1437, 2033, 2140
Bsp19I CCATGG 2 cut(s) 459, 2184
BspACI CCGC 4 cut(s) 638, 808, 865, 1844
BspANI GGCC 5 cut(s) 834, 839, 914, 2208, 2217
BspCNI CTCAG 1 cut(s) 57
BspFNI CGCG 1 cut(s) 808
BspLI GGNNCC 4 cut(s) 855, 897, 1065, 2125
BspMAI CTGCAG 1 cut(s) 1944
BspMI ACCTGC 1 cut(s) 1984
BspPI GGATC 4 cut(s) 354, 1213, 1432, 2135
BspT107I GGYRCC 2 cut(s) 853, 2123
BsrDI GCAATG 2 cut(s) 531, 1575
BsrGI TGTACA 1 cut(s) 2155
BsrI ACTGG 3 cut(s) 669, 1118, 1535
BssECI CCNNGG 9 cut(s) 384, 385, 459, 502, 503, 841, 1707, 2184, 2203
BssMI GATC 6 cut(s) 346, 396, 1205, 1437, 2033, 2140
BssT1I CCWWGG 3 cut(s) 459, 841, 2184
Bst2UI CCWGG 4 cut(s) 836, 858, 1708, 2205
Bst4CI ACNGT 3 cut(s) 474, 694, 1660
Bst6I CTCTTC 3 cut(s) 406, 440, 1589
BstAUI TGTACA 1 cut(s) 2155
BstBAI YACGTR 1 cut(s) 1213
BstDEI CTNAG 2 cut(s) 65, 2098
BstDSI CCRYGG 2 cut(s) 459, 2184
BstENI CCTNNNNNAGG 1 cut(s) 281
BstF5I GGATG 6 cut(s) 203, 412, 526, 658, 1570, 2180
BstFNI CGCG 1 cut(s) 808
BstKTI GATC 6 cut(s) 349, 399, 1208, 1440, 2036, 2143
BstMAI GTCTC 2 cut(s) 992, 1195
BstMBI GATC 6 cut(s) 346, 396, 1205, 1437, 2033, 2140
BstMWI GCNNNNNNNGC 5 cut(s) 787, 920, 1895, 2099, 2214
BstNI CCWGG 4 cut(s) 836, 858, 1708, 2205
BstNSI RCATGY 1 cut(s) 1148
BstSCI CCNGG 8 cut(s) 383, 384, 501, 502, 834, 856, 1706, 2203
BstSFI CTRYAG 2 cut(s) 1401, 1940
BstUI CGCG 1 cut(s) 808
BstV2I GAAGAC 1 cut(s) 486
BstX2I RGATCY 4 cut(s) 346, 1205, 1437, 2033
BstYI RGATCY 4 cut(s) 346, 1205, 1437, 2033
BsuRI GGCC 5 cut(s) 834, 839, 914, 2208, 2217
BtgI CCRYGG 2 cut(s) 459, 2184
BtgZI GCGATG 1 cut(s) 671
BtsCI GGATG 6 cut(s) 203, 412, 526, 658, 1570, 2180
BtsIMutI CAGTG 1 cut(s) 699
BveI ACCTGC 1 cut(s) 1984
Cfr13I GGNCC 3 cut(s) 838, 1063, 2216
Cfr9I CCCGGG 2 cut(s) 384, 502
Csp6I GTAC 6 cut(s) 371, 465, 1538, 1721, 2124, 2156
CviQI GTAC 6 cut(s) 371, 465, 1538, 1721, 2124, 2156
DdeI CTNAG 2 cut(s) 65, 2098
DpnI GATC 6 cut(s) 348, 398, 1207, 1439, 2035, 2142
DpnII GATC 6 cut(s) 346, 396, 1205, 1437, 2033, 2140
EaeI YGGCCR 2 cut(s) 912, 2206
Eam1104I CTCTTC 3 cut(s) 406, 440, 1589
EarI CTCTTC 3 cut(s) 406, 440, 1589
Eco130I CCWWGG 3 cut(s) 459, 841, 2184
Eco147I AGGCCT 1 cut(s) 834
Eco47I GGWCC 1 cut(s) 1063
Eco57I CTGAAG 5 cut(s) 158, 464, 480, 1911, 2124
Eco88I CYCGRG 3 cut(s) 384, 502, 1688
EcoNI CCTNNNNNAGG 1 cut(s) 281
EcoRII CCWGG 4 cut(s) 834, 856, 1706, 2203
EcoT14I CCWWGG 3 cut(s) 459, 841, 2184
EcoT22I ATGCAT 2 cut(s) 1422, 1673
ErhI CCWWGG 3 cut(s) 459, 841, 2184
FalI AAGNNNNNCTT 2 cut(s) 1466, 1498
FaqI GGGAC 2 cut(s) 1535, 1890
FauI CCCGC 1 cut(s) 801
FauNDI CATATG 1 cut(s) 1327
FokI GGATG 6 cut(s) 210, 419, 533, 665, 1577, 2167
FspBI CTAG 7 cut(s) 332, 1235, 1430, 1463, 1791, 1902, 2019
GsuI CTGGAG 2 cut(s) 344, 1518
HaeIII GGCC 5 cut(s) 834, 839, 914, 2208, 2217
HapII CCGG 3 cut(s) 385, 503, 851
HindIII AAGCTT 1 cut(s) 1379
HpaII CCGG 3 cut(s) 385, 503, 851
Hpy166II GTNNAC 3 cut(s) 815, 1530, 2156
Hpy188I TCNGA 9 cut(s) 444, 499, 1063, 1137, 1416, 1458, 1585, 1696, 1884
Hpy188III TCNNGA 4 cut(s) 361, 1373, 1430, 1947
Hpy8I GTNNAC 3 cut(s) 815, 1530, 2156
HpyAV CCTTC 8 cut(s) 40, 172, 220, 235, 769, 1555, 2129, 2206
HpyCH4III ACNGT 3 cut(s) 474, 694, 1660
HpyCH4IV ACGT 2 cut(s) 1212, 1819
HpyF10VI GCNNNNNNNGC 5 cut(s) 787, 920, 1895, 2099, 2214
HpyF3I CTNAG 2 cut(s) 65, 2098
HpySE526I ACGT 2 cut(s) 1212, 1819
KpnI GGTACC 1 cut(s) 2127
Kzo9I GATC 6 cut(s) 346, 396, 1205, 1437, 2033, 2140
LmnI GCTCC 3 cut(s) 187, 250, 778
MaeI CTAG 7 cut(s) 332, 1235, 1430, 1463, 1791, 1902, 2019
MaeII ACGT 2 cut(s) 1212, 1819
MaeIII GTNAC 4 cut(s) 327, 701, 1515, 1786
MalI GATC 6 cut(s) 348, 398, 1207, 1439, 2035, 2142
MboI GATC 6 cut(s) 346, 396, 1205, 1437, 2033, 2140
MflI RGATCY 4 cut(s) 346, 1205, 1437, 2033
MlyI GAGTC 6 cut(s) 500, 1197, 1233, 1551, 1700, 1813
MmeI TCCRAC 3 cut(s) 192, 693, 1183
Mph1103I ATGCAT 2 cut(s) 1422, 1673
MroXI GAANNNNTTC 2 cut(s) 125, 454
MseI TTAA 8 cut(s) 486, 755, 783, 1172, 1506, 1547, 2109, 2224
MslI CAYNNNNRTG 3 cut(s) 985, 1931, 2151
MspA1I CMGCKG 1 cut(s) 1889
MspI CCGG 3 cut(s) 385, 503, 851
MspR9I CCNGG 8 cut(s) 385, 386, 503, 504, 836, 858, 1708, 2205
Mva1269I GAATGC 1 cut(s) 352
MvaI CCWGG 4 cut(s) 836, 858, 1708, 2205
MvnI CGCG 1 cut(s) 808
MwoI GCNNNNNNNGC 5 cut(s) 787, 920, 1895, 2099, 2214
NciI CCSGG 4 cut(s) 385, 386, 503, 504
NcoI CCATGG 2 cut(s) 459, 2184
NdeI CATATG 1 cut(s) 1327
NdeII GATC 6 cut(s) 346, 396, 1205, 1437, 2033, 2140
NlaIV GGNNCC 4 cut(s) 855, 897, 1065, 2125
NmuCI GTSAC 2 cut(s) 701, 1786
NsiI ATGCAT 2 cut(s) 1422, 1673
NspI RCATGY 1 cut(s) 1148
OliI CACNNNNGTG 2 cut(s) 985, 1931
PaeR7I CTCGAG 1 cut(s) 1688
PceI AGGCCT 1 cut(s) 834
PctI GAATGC 1 cut(s) 352
PdmI GAANNNNTTC 2 cut(s) 125, 454
PflMI CCANNNNNTGG 1 cut(s) 1202
PleI GAGTC 6 cut(s) 499, 1196, 1233, 1550, 1699, 1812
PpsI GAGTC 6 cut(s) 499, 1196, 1233, 1550, 1699, 1812
Ppu21I YACGTR 1 cut(s) 1213
Psp6I CCWGG 4 cut(s) 834, 856, 1706, 2203
PspGI CCWGG 4 cut(s) 834, 856, 1706, 2203
PspN4I GGNNCC 4 cut(s) 855, 897, 1065, 2125
PspPI GGNCC 3 cut(s) 838, 1063, 2216
PspXI VCTCGAGB 1 cut(s) 1688
PstI CTGCAG 1 cut(s) 1944
PsuI RGATCY 4 cut(s) 346, 1205, 1437, 2033
PvuII CAGCTG 1 cut(s) 1889
RsaI GTAC 6 cut(s) 372, 466, 1539, 1722, 2125, 2157
RsaNI GTAC 6 cut(s) 371, 465, 1538, 1721, 2124, 2156
RseI CAYNNNNRTG 3 cut(s) 985, 1931, 2151
SaqAI TTAA 8 cut(s) 486, 755, 783, 1172, 1506, 1547, 2109, 2224
Sau3AI GATC 6 cut(s) 346, 396, 1205, 1437, 2033, 2140
Sau96I GGNCC 3 cut(s) 838, 1063, 2216
SchI GAGTC 6 cut(s) 500, 1197, 1233, 1551, 1700, 1813
ScrFI CCNGG 8 cut(s) 385, 386, 503, 504, 836, 858, 1708, 2205
SfcI CTRYAG 2 cut(s) 1401, 1940
SfiI GGCCNNNNNGGCC 1 cut(s) 2214
Sfr274I CTCGAG 1 cut(s) 1688
SinI GGWCC 1 cut(s) 1063
SlaI CTCGAG 1 cut(s) 1688
SmaI CCCGGG 2 cut(s) 386, 504
SmiMI CAYNNNNRTG 3 cut(s) 985, 1931, 2151
SmlI CTYRAG 2 cut(s) 1373, 1688
SmoI CTYRAG 2 cut(s) 1373, 1688
SpeI ACTAGT 1 cut(s) 1462
SseBI AGGCCT 1 cut(s) 834
SsiI CCGC 4 cut(s) 638, 808, 865, 1844
SspI AATATT 1 cut(s) 1162
SspMI CTAG 7 cut(s) 332, 1235, 1430, 1463, 1791, 1902, 2019
StuI AGGCCT 1 cut(s) 834
StyD4I CCNGG 8 cut(s) 383, 384, 501, 502, 834, 856, 1706, 2203
StyI CCWWGG 3 cut(s) 459, 841, 2184
TaaI ACNGT 3 cut(s) 474, 694, 1660
TaiI ACGT 2 cut(s) 1215, 1822
TaqI TCGA 4 cut(s) 83, 218, 1666, 1689
TatI WGTACW 2 cut(s) 1720, 2155
TauI GCSGC 1 cut(s) 867
Tru1I TTAA 8 cut(s) 486, 755, 783, 1172, 1506, 1547, 2109, 2224
Tru9I TTAA 8 cut(s) 486, 755, 783, 1172, 1506, 1547, 2109, 2224
TscAI CASTG 1 cut(s) 699
TseFI GTSAC 2 cut(s) 701, 1786
Tsp45I GTSAC 2 cut(s) 701, 1786
TspMI CCCGGG 2 cut(s) 384, 502
TspRI CASTG 1 cut(s) 699
Van91I CCANNNNNTGG 1 cut(s) 1202
VpaK11BI GGWCC 1 cut(s) 1063
XagI CCTNNNNNAGG 1 cut(s) 281
XapI RAATTY 3 cut(s) 1096, 1874, 2055
XbaI TCTAGA 1 cut(s) 1429
XceI RCATGY 1 cut(s) 1148
XcmI CCANNNNNNNNNTGG 1 cut(s) 691
XhoI CTCGAG 1 cut(s) 1688
XmaI CCCGGG 2 cut(s) 384, 502
XmnI GAANNNNTTC 2 cut(s) 125, 454
XspI CTAG 7 cut(s) 332, 1235, 1430, 1463, 1791, 1902, 2019
Zsp2I ATGCAT 2 cut(s) 1422, 1673
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.