Rmu_sc0008518.1_g000002

FRIGIDA-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008518.1
OG0000126
Physical Location & Seq
Reverse (-)
11190 .. 14973
3784 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008518.1_g000002.1.cds

Sequence Viewer

Length: 2409 bp
atggaattggaagagaagagcaagaaagagtgtggtttggaccagaactcgattgagcaatgtgagaaagagatggagttgaagagaggggagcttgattcgaatcggaaatcgatggctgaatgttttgatacagttgaattgagagagggaaagatgagggaaatgtgtggaggttttagtttgcttaagaagtcgatggaggagtggtgctgtaaggttgaattgaaagagagggagattgaggagtgtgttgccaagcttgaattgaaggagaaacaagttgaatcgagatttgaggagcttaatgtgattgataagagggttaatgagtgccttggtgatgctcagttgaaagaaaagcagttggattctgttatgaaattaatacaagaagacaaacagcatttggattggctccaaaagtcggtggaagagcatgaaaaaaagttgggtttggtatcaaatggacttcaaggaaaggcgagggaacttgaagtgcaacaacaacaaattgattcagtctaccatgtgttacagatgaaagagaatgaacttgaacagcaggcgcaagagcttgatttgaaacgccagcaatatgagtcactttgccatctgtttcagatcaaagagggtcaacttgaaaagcaatccaaagatcttgaattgaaacacaaacaaattgaatccatccaccatctgattcaaattaaagagtcgcaacttgaaaatcgagccaaggagcttggattcaaacagcaacaaaatgattcaatctctcaactacttaagatgaaagaaagggaacttgaacagcaggaaaaagagcttgaacccaaacaacagcaaattgtttcagtttcgcagacacttcagatgaaagagagaaaacttgaacagcaggcaaaagagcttgacttgaagcaaaaacaatatgattctcaggtgaagatggtccagttgatacatgcacctgctgctaacaatgccactattccttcatctgcaactgatgaatccaggtccagcatcaatatagatggtcgaggcttgcagttttttatgtatgaacaattgaagaaaattgattcaatgcgtgcccaaatgtcggctgcttttcaagtgtcatcagaccctggaaatttggttttggatgcaatgcaaggattttacccttcaaattcaaatatgggaaagagggagactgattttgatctgagctttattagaagaagttgtattcttctgttacaggagttaaagaggatgtcaccacaacttaatcctggggtaagagaaaaagcattgaagttggcagctcattggaaggccaagttgacagtggccactgataattcgttggaggttttgggatttttgcggcttgtaactgcgtttgaattaacctctgcttatgatgccaatgagcttcagagtcttctttctgtagttactcagcccgaacaagcagctcaattaagaaaggctctcggtgtcaaagataaggaaccttcaacctttccttcttcaaatattcaaccaaatgtcactaaggatgcagggaatgtgtcggggtttggaaataagcctttaagtgggaatcattctatactggctgcttctgttccattgtcatcagacccagctaaacttgtgttggatagcatccaaaaatctcttgctgaatacttgcgaaatggagattgtgaagaaagtatcatgtcaagaaacattagcctattggaggagctaatgagagtttcaccaaatgttggacctaatctgaaagcagaagcaacaaatctatcagtccagtggaaagcaaagatggcaggaaatactgagaagtcattggagggtgtaggatttttgctatttttagctacatatggattgctttctacgttaaatgctgatgagattgtaaagcatcttgggttgatttgtcaccataaacaggctctagaattatgccaggcacgtggttttgcagataagattggtgaatttattcggatccttgttgaaaagaagcaacttattgaggctgttagatttattttcgcgttcaagttaactgacaagctttccccagtccaacttttaaaagaatatttggaggatacaaaaaagtgttctgaagcaattttcatgttgcagatatcacaagatgaaaaggagaaggtggcagatggtctgttaggtgatctaagagctgtgcatcaatacattaaggattacaatcttgagtccaaatacccatctgcagacattgaaatgcaaatagttaagctggaaacagtaaagtcttcccctgcctccaatgtcgaacagcaagagcagagaaaaaggaagaaacctagtgctggcacttcgacccttgagatccaaccaccacaacaggcctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida

Protein Analysis

802

Amino Acids

91.16

Weight (kDa)

5.79

Isoelectric Point (pI)

54.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 982
Acc36I ACCTGC 1 cut(s) 982
AccB7I CCANNNNNTGG 1 cut(s) 1772
AccI GTMKAC 1 cut(s) 525
AccII CGCG 1 cut(s) 2066
AciI CCGC 1 cut(s) 1381
AclWI GGATC 3 cut(s) 2011, 2024, 2380
AcoI YGGCCR 1 cut(s) 1344
AcsI RAATTY 3 cut(s) 1141, 1180, 2006
AcuI CTGAAG 3 cut(s) 857, 1415, 2160
AcvI CACGTG 1 cut(s) 1982
AfiI CCNNNNNNNGG 7 cut(s) 427, 1108, 1595, 1744, 1772, 1957, 2366
AflII CTTAAG 2 cut(s) 188, 788
AjnI CCWGG 4 cut(s) 1019, 1135, 1285, 1974
Alw26I GTCTC 1 cut(s) 1196
AlwI GGATC 3 cut(s) 2011, 2024, 2380
AlwNI CAGNNNCTG 1 cut(s) 1136
AoxI GGCC 3 cut(s) 1329, 1344, 2403
ApeKI GCWGC 5 cut(s) 977, 1112, 1316, 1469, 1616
ApoI RAATTY 3 cut(s) 1141, 1180, 2006
AseI ATTAAT 1 cut(s) 386
Asp700I GAANNNNTTC 1 cut(s) 2010
AspLEI GCGC 1 cut(s) 571
AspS9I GGNCC 4 cut(s) 40, 955, 1023, 1775
AsuHPI GGTGA 7 cut(s) 353, 958, 1263, 1755, 1940, 2015, 2216
AsuII TTCGAA 1 cut(s) 101
AvaII GGWCC 4 cut(s) 40, 955, 1023, 1775
BaeGI GKGCMC 1 cut(s) 1102
BalI TGGCCA 1 cut(s) 1346
BamHI GGATCC 1 cut(s) 2016
BbrPI CACGTG 1 cut(s) 1982
BbsI GAAGAC 3 cut(s) 402, 1430, 2301
BbvI GCAGC 5 cut(s) 964, 1099, 1328, 1481, 1603
BciT130I CCWGG 4 cut(s) 1021, 1137, 1287, 1976
BciVI GTATCC 1 cut(s) 2116
BcoDI GTCTC 1 cut(s) 1196
BfaI CTAG 2 cut(s) 1964, 2361
BfmI CTRYAG 2 cut(s) 1446, 2265
BfrI CTTAAG 2 cut(s) 188, 788
BfuAI ACCTGC 1 cut(s) 982
BfuI GTATCC 1 cut(s) 2116
BglII AGATCT 1 cut(s) 658
BisI GCNGC 6 cut(s) 978, 1113, 1317, 1382, 1470, 1617
BlsI GCNGC 6 cut(s) 979, 1114, 1318, 1383, 1471, 1618
Bme1390I CCNGG 4 cut(s) 1021, 1137, 1287, 1976
Bme18I GGWCC 4 cut(s) 40, 955, 1023, 1775
BmgT120I GGNCC 4 cut(s) 40, 955, 1023, 1775
BmiI GGNNCC 3 cut(s) 419, 1509, 2018
BmrFI CCNGG 4 cut(s) 1021, 1137, 1287, 1976
BmrI ACTGGG 1 cut(s) 2087
BmsI GCATC 8 cut(s) 334, 1038, 1144, 1408, 1546, 1674, 1939, 2230
BmuI ACTGGG 1 cut(s) 2087
BpiI GAAGAC 3 cut(s) 402, 1430, 2301
Bpu14I TTCGAA 1 cut(s) 101
BpuEI CTTGAG 2 cut(s) 2267, 2402
Bsa29I ATCGAT 1 cut(s) 113
BsaAI YACGTR 1 cut(s) 1982
BsaBI GATNNNNATC 3 cut(s) 102, 1212, 2241
BsaJI CCNNGG 4 cut(s) 337, 738, 1135, 1286
BsaXI ACNNNNNCTCC 2 cut(s) 194, 224
Bsc4I CCNNNNNNNGG 7 cut(s) 427, 1108, 1595, 1744, 1772, 1957, 2366
Bse1I ACTGG 4 cut(s) 958, 1617, 1813, 2093
Bse3DI GCAATG 2 cut(s) 65, 1164
Bse8I GATNNNNATC 3 cut(s) 102, 1212, 2241
BseBI CCWGG 4 cut(s) 1021, 1137, 1287, 1976
BseCI ATCGAT 1 cut(s) 113
BseDI CCNNGG 4 cut(s) 337, 738, 1135, 1286
BseGI GGATG 5 cut(s) 690, 1159, 1272, 1561, 1665
BseJI GATNNNNATC 3 cut(s) 102, 1212, 2241
BseLI CCNNNNNNNGG 7 cut(s) 427, 1108, 1595, 1744, 1772, 1957, 2366
BseMI GCAATG 2 cut(s) 65, 1164
BseMII CTCAG 5 cut(s) 362, 956, 1208, 1469, 1833
BseNI ACTGG 4 cut(s) 958, 1617, 1813, 2093
BseRI GAGGAG 4 cut(s) 218, 260, 314, 1760
BseSI GKGCMC 1 cut(s) 1102
BseXI GCAGC 5 cut(s) 964, 1099, 1328, 1481, 1603
BseYI CCCAGC 1 cut(s) 1642
Bsh1236I CGCG 1 cut(s) 2066
BshFI GGCC 3 cut(s) 1331, 1346, 2405
BshVI ATCGAT 1 cut(s) 113
BslI CCNNNNNNNGG 7 cut(s) 427, 1108, 1595, 1744, 1772, 1957, 2366
BsmAI GTCTC 1 cut(s) 1196
BsnI GGCC 3 cut(s) 1331, 1346, 2405
Bsp119I TTCGAA 1 cut(s) 101
Bsp1286I GDGCHC 1 cut(s) 1102
Bsp143I GATC 6 cut(s) 624, 658, 1213, 2016, 2206, 2385
BspACI CCGC 1 cut(s) 1381
BspANI GGCC 3 cut(s) 1331, 1346, 2405
BspCNI CTCAG 5 cut(s) 361, 955, 1209, 1468, 1834
BspDI ATCGAT 1 cut(s) 113
BspFNI CGCG 1 cut(s) 2066
BspLI GGNNCC 3 cut(s) 419, 1509, 2018
BspMAI CTGCAG 1 cut(s) 2269
BspMI ACCTGC 1 cut(s) 982
BspPI GGATC 3 cut(s) 2011, 2024, 2380
BspQI GCTCTTC 2 cut(s) 11, 429
BspT104I TTCGAA 1 cut(s) 101
BspTI CTTAAG 2 cut(s) 188, 788
BsrDI GCAATG 2 cut(s) 65, 1164
BsrI ACTGG 4 cut(s) 958, 1617, 1813, 2093
BssECI CCNNGG 4 cut(s) 337, 738, 1135, 1286
BssMI GATC 6 cut(s) 624, 658, 1213, 2016, 2206, 2385
BssT1I CCWWGG 2 cut(s) 337, 738
Bst2UI CCWGG 4 cut(s) 1021, 1137, 1287, 1976
Bst4CI ACNGT 3 cut(s) 136, 1342, 2302
Bst6I CTCTTC 4 cut(s) 6, 11, 77, 429
BstAFI CTTAAG 2 cut(s) 188, 788
BstAPI GCANNNNNTGC 1 cut(s) 977
BstBAI YACGTR 1 cut(s) 1982
BstBI TTCGAA 1 cut(s) 101
BstC8I GCNNGC 6 cut(s) 567, 593, 903, 1052, 1098, 2368
BstDEI CTNAG 7 cut(s) 348, 942, 1217, 1455, 1551, 1842, 2210
BstENI CCTNNNNNAGG 1 cut(s) 1742
BstF5I GGATG 5 cut(s) 690, 1159, 1272, 1561, 1665
BstFNI CGCG 1 cut(s) 2066
BstHHI GCGC 1 cut(s) 571
BstKTI GATC 6 cut(s) 627, 661, 1216, 2019, 2209, 2388
BstMAI GTCTC 1 cut(s) 1196
BstMBI GATC 6 cut(s) 624, 658, 1213, 2016, 2206, 2385
BstMWI GCNNNNNNNGC 4 cut(s) 977, 986, 1418, 1829
BstNI CCWGG 4 cut(s) 1021, 1137, 1287, 1976
BstNSI RCATGY 1 cut(s) 971
BstSCI CCNGG 4 cut(s) 1019, 1135, 1285, 1974
BstSFI CTRYAG 2 cut(s) 1446, 2265
BstSLI GKGCMC 1 cut(s) 1102
BstUI CGCG 1 cut(s) 2066
BstV1I GCAGC 5 cut(s) 964, 1099, 1328, 1481, 1603
BstV2I GAAGAC 3 cut(s) 402, 1430, 2301
BstX2I RGATCY 3 cut(s) 658, 2016, 2385
BstXI CCANNNNNNTGG 1 cut(s) 1982
BstYI RGATCY 3 cut(s) 658, 2016, 2385
Bsu15I ATCGAT 1 cut(s) 113
BsuI GTATCC 1 cut(s) 2116
BsuRI GGCC 3 cut(s) 1331, 1346, 2405
BsuTUI ATCGAT 1 cut(s) 113
BtsCI GGATG 5 cut(s) 690, 1159, 1272, 1561, 1665
BtsIMutI CAGTG 3 cut(s) 1347, 1347, 1820
BveI ACCTGC 1 cut(s) 982
Cac8I GCNNGC 6 cut(s) 567, 593, 903, 1052, 1098, 2368
CaiI CAGNNNCTG 1 cut(s) 1136
CfoI GCGC 1 cut(s) 571
Cfr13I GGNCC 4 cut(s) 40, 955, 1023, 1775
ClaI ATCGAT 1 cut(s) 113
CviAII CATG 5 cut(s) 440, 530, 968, 1720, 2152
DdeI CTNAG 7 cut(s) 348, 942, 1217, 1455, 1551, 1842, 2210
DpnI GATC 6 cut(s) 626, 660, 1215, 2018, 2208, 2387
DpnII GATC 6 cut(s) 624, 658, 1213, 2016, 2206, 2385
DraI TTTAAA 1 cut(s) 2106
EaeI YGGCCR 1 cut(s) 1344
Eam1104I CTCTTC 4 cut(s) 6, 11, 77, 429
EarI CTCTTC 4 cut(s) 6, 11, 77, 429
Eco130I CCWWGG 2 cut(s) 337, 738
Eco147I AGGCCT 1 cut(s) 2405
Eco32I GATATC 1 cut(s) 2163
Eco47I GGWCC 4 cut(s) 40, 955, 1023, 1775
Eco57I CTGAAG 3 cut(s) 857, 1415, 2160
Eco72I CACGTG 1 cut(s) 1982
EcoNI CCTNNNNNAGG 1 cut(s) 1742
EcoRII CCWGG 4 cut(s) 1019, 1135, 1285, 1974
EcoRV GATATC 1 cut(s) 2163
EcoT14I CCWWGG 2 cut(s) 337, 738
ErhI CCWWGG 2 cut(s) 337, 738
FaeI CATG 5 cut(s) 443, 533, 971, 1723, 2155
FatI CATG 5 cut(s) 439, 529, 967, 1719, 2151
FauNDI CATATG 1 cut(s) 1888
FblI GTMKAC 1 cut(s) 525
Fnu4HI GCNGC 6 cut(s) 978, 1113, 1317, 1382, 1470, 1617
FokI GGATG 5 cut(s) 677, 1166, 1279, 1568, 1652
Fsp4HI GCNGC 6 cut(s) 978, 1113, 1317, 1382, 1470, 1617
FspBI CTAG 2 cut(s) 1964, 2361
GlaI GCGC 1 cut(s) 570
GluI GCNGC 6 cut(s) 978, 1113, 1317, 1382, 1470, 1617
GsaI CCCAGC 1 cut(s) 1646
HaeIII GGCC 3 cut(s) 1331, 1346, 2405
HhaI GCGC 1 cut(s) 571
Hin1II CATG 5 cut(s) 443, 533, 971, 1723, 2155
Hin6I GCGC 1 cut(s) 569
HinP1I GCGC 1 cut(s) 569
HincII GTYRAC 3 cut(s) 638, 1338, 2076
HindII GTYRAC 3 cut(s) 638, 1338, 2076
HindIII AAGCTT 2 cut(s) 260, 2084
HpaI GTTAAC 1 cut(s) 2076
HphI GGTGA 7 cut(s) 353, 958, 1263, 1755, 1940, 2015, 2216
Hpy166II GTNNAC 4 cut(s) 526, 638, 1338, 2076
Hpy188III TCNNGA 5 cut(s) 291, 662, 1725, 1964, 2246
Hpy8I GTNNAC 4 cut(s) 526, 638, 1338, 2076
HpyAV CCTTC 7 cut(s) 265, 1008, 1185, 1321, 1521, 1533, 2176
HpyCH4III ACNGT 3 cut(s) 136, 1342, 2302
HpyCH4IV ACGT 2 cut(s) 1904, 1981
HpyF10VI GCNNNNNNNGC 4 cut(s) 977, 986, 1418, 1829
HpyF3I CTNAG 7 cut(s) 348, 942, 1217, 1455, 1551, 1842, 2210
HpySE526I ACGT 2 cut(s) 1904, 1981
Hsp92II CATG 5 cut(s) 443, 533, 971, 1723, 2155
HspAI GCGC 1 cut(s) 569
KspAI GTTAAC 1 cut(s) 2076
Kzo9I GATC 6 cut(s) 624, 658, 1213, 2016, 2206, 2385
LguI GCTCTTC 2 cut(s) 11, 429
LmnI GCTCC 5 cut(s) 91, 301, 423, 742, 1747
Lsp1109I GCAGC 5 cut(s) 964, 1099, 1328, 1481, 1603
LweI GCATC 8 cut(s) 334, 1038, 1144, 1408, 1546, 1674, 1939, 2230
MaeI CTAG 2 cut(s) 1964, 2361
MaeII ACGT 2 cut(s) 1904, 1981
MaeIII GTNAC 8 cut(s) 534, 603, 1248, 1269, 1387, 1450, 1546, 1946
MalI GATC 6 cut(s) 626, 660, 1215, 2018, 2208, 2387
MboI GATC 6 cut(s) 624, 658, 1213, 2016, 2206, 2385
MfeI CAATTG 1 cut(s) 1073
MflI RGATCY 3 cut(s) 658, 2016, 2385
MhlI GDGCHC 1 cut(s) 1102
MlsI TGGCCA 1 cut(s) 1346
MluNI TGGCCA 1 cut(s) 1346
MlyI GAGTC 4 cut(s) 611, 725, 1444, 2258
MmeI TCCRAC 5 cut(s) 348, 1341, 1638, 1753, 2122
Mox20I TGGCCA 1 cut(s) 1346
MroXI GAANNNNTTC 1 cut(s) 2010
MscI TGGCCA 1 cut(s) 1346
MslI CAYNNNNRTG 1 cut(s) 2276
Msp20I TGGCCA 1 cut(s) 1346
MspCI CTTAAG 2 cut(s) 188, 788
MspR9I CCNGG 4 cut(s) 1021, 1137, 1287, 1976
MunI CAATTG 1 cut(s) 1073
MvaI CCWGG 4 cut(s) 1021, 1137, 1287, 1976
MvnI CGCG 1 cut(s) 2066
MwoI GCNNNNNNNGC 4 cut(s) 977, 986, 1418, 1829
NdeI CATATG 1 cut(s) 1888
NdeII GATC 6 cut(s) 624, 658, 1213, 2016, 2206, 2385
NlaIII CATG 5 cut(s) 443, 533, 971, 1723, 2155
NlaIV GGNNCC 3 cut(s) 419, 1509, 2018
NmuCI GTSAC 4 cut(s) 603, 1269, 1546, 1946
NspI RCATGY 1 cut(s) 971
NspV TTCGAA 1 cut(s) 101
PaqCI CACCTGC 1 cut(s) 982
PceI AGGCCT 1 cut(s) 2405
PciSI GCTCTTC 2 cut(s) 11, 429
PdmI GAANNNNTTC 1 cut(s) 2010
PflMI CCANNNNNTGG 1 cut(s) 1772
PkrI GCNGC 6 cut(s) 979, 1114, 1318, 1383, 1471, 1618
PleI GAGTC 4 cut(s) 610, 724, 1443, 2257
PmaCI CACGTG 1 cut(s) 1982
PmlI CACGTG 1 cut(s) 1982
PpsI GAGTC 4 cut(s) 610, 724, 1443, 2257
Ppu21I YACGTR 1 cut(s) 1982
PshBI ATTAAT 1 cut(s) 386
Psp6I CCWGG 4 cut(s) 1019, 1135, 1285, 1974
PspCI CACGTG 1 cut(s) 1982
PspFI CCCAGC 1 cut(s) 1642
PspGI CCWGG 4 cut(s) 1019, 1135, 1285, 1974
PspN4I GGNNCC 3 cut(s) 419, 1509, 2018
PspPI GGNCC 4 cut(s) 40, 955, 1023, 1775
PstI CTGCAG 1 cut(s) 2269
PstNI CAGNNNCTG 1 cut(s) 1136
PsuI RGATCY 3 cut(s) 658, 2016, 2385
RseI CAYNNNNRTG 1 cut(s) 2276
SapI GCTCTTC 2 cut(s) 11, 429
SatI GCNGC 6 cut(s) 978, 1113, 1317, 1382, 1470, 1617
Sau3AI GATC 6 cut(s) 624, 658, 1213, 2016, 2206, 2385
Sau96I GGNCC 4 cut(s) 40, 955, 1023, 1775
SchI GAGTC 4 cut(s) 611, 725, 1444, 2258
ScrFI CCNGG 4 cut(s) 1021, 1137, 1287, 1976
SduI GDGCHC 1 cut(s) 1102
SfaNI GCATC 8 cut(s) 334, 1038, 1144, 1408, 1546, 1674, 1939, 2230
SfcI CTRYAG 2 cut(s) 1446, 2265
SfuI TTCGAA 1 cut(s) 101
SinI GGWCC 4 cut(s) 40, 955, 1023, 1775
SmiMI CAYNNNNRTG 1 cut(s) 2276
SmlI CTYRAG 4 cut(s) 188, 788, 2246, 2381
SmoI CTYRAG 4 cut(s) 188, 788, 2246, 2381
SseBI AGGCCT 1 cut(s) 2405
SsiI CCGC 1 cut(s) 1381
SspI AATATT 2 cut(s) 1534, 2114
SspMI CTAG 2 cut(s) 1964, 2361
StuI AGGCCT 1 cut(s) 2405
StyD4I CCNGG 4 cut(s) 1019, 1135, 1285, 1974
StyI CCWWGG 2 cut(s) 337, 738
TaaI ACNGT 3 cut(s) 136, 1342, 2302
TaiI ACGT 2 cut(s) 1907, 1984
TaqI TCGA 9 cut(s) 50, 101, 113, 197, 290, 733, 1045, 2328, 2375
TauI GCSGC 1 cut(s) 1384
TscAI CASTG 3 cut(s) 1347, 1354, 1820
TseFI GTSAC 4 cut(s) 603, 1269, 1546, 1946
TseI GCWGC 5 cut(s) 977, 1112, 1316, 1469, 1616
Tsp45I GTSAC 4 cut(s) 603, 1269, 1546, 1946
TspRI CASTG 3 cut(s) 1347, 1354, 1820
Van91I CCANNNNNTGG 1 cut(s) 1772
Vha464I CTTAAG 2 cut(s) 188, 788
VpaK11BI GGWCC 4 cut(s) 40, 955, 1023, 1775
VspI ATTAAT 1 cut(s) 386
XagI CCTNNNNNAGG 1 cut(s) 1742
XapI RAATTY 3 cut(s) 1141, 1180, 2006
XbaI TCTAGA 1 cut(s) 1963
XceI RCATGY 1 cut(s) 971
XcmI CCANNNNNNNNNTGG 1 cut(s) 1339
XmiI GTMKAC 1 cut(s) 525
XmnI GAANNNNTTC 1 cut(s) 2010
XspI CTAG 2 cut(s) 1964, 2361
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.