Rmu_sc0009015.1_g000007

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009015.1
OG0000126
Physical Location & Seq
Forward (+)
16041 .. 19448
3408 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009015.1_g000007.1.cds

Sequence Viewer

Length: 2355 bp
atggaggaggagatagcatcggagttgggagaatcggagttgaagcagagaaatgtgagggaagcgtggatggagctggaagaccactttgactcaacccggagggggctccggacccggttccaggagctccaggcccgcgaggaggaaatcggagtccgtgagaagctgttggaggtgaaagagctgagattcgaagctcaggccaagggattgaatgaagttgtgaagcgggccgaagaaggtaagagtcagttggagtctcttagggttttgattgaaaaacatgaagaagagcttggtgttaaagaaaagaggctctcggaggttggggaattggttggggaaaaggagagggagtatgatttgattcagaatcgtgtgaaagagaggggtaagagactgaacaagtataatcgtgcgattgagttgaaaagggggcaacttggttcgactctgaaatcgatgatggaatgccagagcagaatcgattcgagggagaagataatgagggaaatggagttgaaagggaggggcttttgtttgctgaagaaatcgatggaggattggttatgtaaagttgaattgagaaacagggagcttgatggatgggttgagattcttgagctgaaggagaaggatgttgagtccaaagttgaggaagtactccatttgattgttgagagggtcagtgaatgccttgatgaggttcaggtgaaagaagagcattttgtttcgttagaaaaaccgacgcaggagcaggaaatgcatttgtgttcactccaaaagttggtgcaacagcatgacaaggagttggattcactgtcccatgaacttcaaaggaaagagaggcatattgaagaggttgaattgaagatggcgaaattaggacatgcgattccttcatacgtaagtgatgatcattccagcattcattgggatggtagaggcttgcaaatgttcatgaatgagcagttgaagagaatatattcaatgggtagcgaaatgtcagcaattcttaaggcctcatctgacccagcaaaattggttttggatgcaatgcaaggattttacccttcaagttcaactctggacaacaaggaaactcattttgatttgacagttattagaaggagttgtattcttttgttagaggatttgaagagaatgtcaccacaaattaatgctcgggtgagaaacgaagcaataaagttggcggctgactggaaggctaagatagtatctagtgagaatacacaggagattttggggtttttgcggcttgttaatacgtatggattgagttcgatgtatgatgcgaaagatcttcaaagccttcttgctgttgttcataagcccgaacaagcatctcaatcaagtagggcccttggtatcaaagataaagcacctgagaccagcatcatttcttcccttatcaaaactgtggaaccagaatcttcactggctataaatgcaacaactctctcttctccaaatccttcttcccagaatgacatgttggcttctcttttattggtctctgacccagcagaacatgtcttgaatagtgtgcagagatcattttctcagtactggaaacatgaagatgttagtttcaaagaacgtatcatgttgaataacatgtctttgttggagtgtctaacgattatctcaccgcatattggacctcatgtgaaagaagatgcaaaacttcttgcagcctattggaaaccaaagatgacaggcaatactgaaaattcagttgagactttaggatttttgctgtttatatctacatatggattggtttctacattgaatacagaggagattataaagcttcttgaggtgatatctcagaataaaggggctgtagatttatgtcagacgcatggttatgcagataagatctctgattttattcggaatctgatagaaaggaagcaactgatggatgctgttggatttatttgcaccttcaacctagctgacaagctccccccaataccactcttaaaacaatatgtagaggatgcaaagaagtgttccgaagtaacttgcagcttaaagatacttcataatgaaaaggttaagattgtagacaacctcatagctgatctaagagctgggaaacaatgcatcaaagaataccatctcgagtgcgaatacccatatgcggacattgaaatgcaaatagttcagctggaaaaactgaaggagaattggagatgctcggcgccatctcttggctccagtattgttgaatcacaagtgcagagaaaaagaaagaagcctaatactagcagttctgcctgtacgcgtgcatttccatcacaacagcagcgtaagctgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida TEX13

Protein Analysis

784

Amino Acids

89.85

Weight (kDa)

5.98

Isoelectric Point (pI)

54.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1835
AccB1I GGYRCC 1 cut(s) 2236
AccB7I CCANNNNNTGG 2 cut(s) 790, 2246
AccI GTMKAC 1 cut(s) 2100
AccII CGCG 2 cut(s) 141, 2320
AccIII TCCGGA 1 cut(s) 111
AciI CCGC 6 cut(s) 139, 232, 1217, 1279, 1676, 2177
AcsI RAATTY 1 cut(s) 1756
AcuI CTGAAG 3 cut(s) 569, 650, 2234
AcyI GRCGYC 1 cut(s) 2237
AfaI GTAC 3 cut(s) 666, 1592, 2317
AfiI CCNNNNNNNGG 8 cut(s) 105, 124, 145, 706, 790, 1682, 2176, 2246
AflII CTTAAG 1 cut(s) 1019
AflIII ACRYGT 4 cut(s) 1515, 1555, 1641, 2318
AjnI CCWGG 2 cut(s) 123, 132
AjuI GAANNNNNNNTTGG 6 cut(s) 282, 314, 1486, 1502, 1518, 1534
Alw21I GWGCWC 1 cut(s) 132
Alw26I GTCTC 5 cut(s) 267, 394, 1406, 1543, 1760
Ama87I CYCGRG 2 cut(s) 1188, 2156
Aor13HI TCCGGA 1 cut(s) 111
AoxI GGCC 5 cut(s) 135, 204, 234, 1023, 1383
ApaI GGGCCC 1 cut(s) 1387
ApeKI GCWGC 3 cut(s) 1718, 2061, 2341
ApoI RAATTY 1 cut(s) 1756
AseI ATTAAT 1 cut(s) 1182
Asp700I GAANNNNTTC 2 cut(s) 490, 988
AspLEI GCGC 1 cut(s) 2239
AspS9I GGNCC 6 cut(s) 114, 136, 234, 1383, 1384, 1685
AsuC2I CCSGG 2 cut(s) 100, 118
AsuHPI GGTGA 6 cut(s) 190, 727, 1164, 1204, 1665, 1861
AsuII TTCGAA 1 cut(s) 195
AvaI CYCGRG 2 cut(s) 1188, 2156
AvaII GGWCC 2 cut(s) 114, 1685
BaeGI GKGCMC 1 cut(s) 1387
BanI GGYRCC 1 cut(s) 2236
BanII GRGCYC 3 cut(s) 111, 132, 1387
BbsI GAAGAC 1 cut(s) 87
Bbv12I GWGCWC 1 cut(s) 132
BbvI GCAGC 2 cut(s) 1730, 2073
BciT130I CCWGG 2 cut(s) 125, 134
BclI TGATCA 1 cut(s) 919
BcnI CCSGG 2 cut(s) 100, 118
BcoDI GTCTC 5 cut(s) 267, 394, 1406, 1543, 1760
BfaI CTAG 3 cut(s) 1245, 1985, 2301
BfmI CTRYAG 1 cut(s) 1872
BfoI RGCGCY 1 cut(s) 2240
BfrI CTTAAG 1 cut(s) 1019
BglII AGATCT 2 cut(s) 1324, 1908
BisI GCNGC 5 cut(s) 1218, 1280, 1719, 2062, 2342
BlsI GCNGC 5 cut(s) 1219, 1281, 1720, 2063, 2343
BmcAI AGTACT 2 cut(s) 666, 1592
Bme1390I CCNGG 4 cut(s) 100, 118, 125, 134
Bme18I GGWCC 2 cut(s) 114, 1685
BmeT110I CYCGRG 2 cut(s) 1188, 2156
BmgT120I GGNCC 6 cut(s) 114, 136, 234, 1383, 1384, 1685
BmiI GGNNCC 7 cut(s) 110, 116, 122, 1385, 1449, 2238, 2251
BmrFI CCNGG 4 cut(s) 100, 118, 125, 134
BpiI GAAGAC 1 cut(s) 87
BpmI CTGGAG 2 cut(s) 116, 2236
Bpu10I CCTNAGC 1 cut(s) 201
Bpu14I TTCGAA 1 cut(s) 195
BpuEI CTTGAG 2 cut(s) 644, 1865
BpuMI CCSGG 2 cut(s) 100, 118
Bsa29I ATCGAT 3 cut(s) 464, 489, 557
BsaAI YACGTR 2 cut(s) 910, 1293
BsaHI GRCGYC 1 cut(s) 2237
BsaI GGTCTC 2 cut(s) 1406, 1543
BsaJI CCNNGG 2 cut(s) 207, 1387
BsaWI WCCGGW 1 cut(s) 111
BsaXI ACNNNNNCTCC 4 cut(s) 344, 374, 554, 584
Bsc4I CCNNNNNNNGG 8 cut(s) 105, 124, 145, 706, 790, 1682, 2176, 2246
Bse1I ACTGG 4 cut(s) 1229, 1467, 1598, 2253
Bse3DI GCAATG 1 cut(s) 1065
BseAI TCCGGA 1 cut(s) 111
BseBI CCWGG 2 cut(s) 125, 134
BseCI ATCGAT 3 cut(s) 464, 489, 557
BseDI CCNNGG 2 cut(s) 207, 1387
BseGI GGATG 7 cut(s) 75, 614, 646, 946, 1060, 1960, 2038
BseLI CCNNNNNNNGG 8 cut(s) 105, 124, 145, 706, 790, 1682, 2176, 2246
BseMI GCAATG 1 cut(s) 1065
BseMII CTCAG 5 cut(s) 179, 215, 1401, 1601, 1871
BseNI ACTGG 4 cut(s) 1229, 1467, 1598, 2253
BseRI GAGGAG 4 cut(s) 20, 23, 158, 1841
BseSI GKGCMC 1 cut(s) 1387
BseXI GCAGC 2 cut(s) 1730, 2073
BseYI CCCAGC 3 cut(s) 1036, 1546, 2126
BsgI GTGCAG 2 cut(s) 1592, 2294
Bsh1236I CGCG 2 cut(s) 141, 2320
BshFI GGCC 5 cut(s) 137, 206, 236, 1025, 1385
BshNI GGYRCC 1 cut(s) 2236
BshVI ATCGAT 3 cut(s) 464, 489, 557
BsiHKAI GWGCWC 1 cut(s) 132
BsiHKCI CYCGRG 2 cut(s) 1188, 2156
BsiSI CCGG 3 cut(s) 100, 112, 118
BslFI GGGAC 1 cut(s) 811
BslI CCNNNNNNNGG 8 cut(s) 105, 124, 145, 706, 790, 1682, 2176, 2246
BsmAI GTCTC 5 cut(s) 267, 394, 1406, 1543, 1760
BsmFI GGGAC 1 cut(s) 811
BsmI GAATGC 3 cut(s) 479, 701, 930
BsnI GGCC 5 cut(s) 137, 206, 236, 1025, 1385
Bso31I GGTCTC 2 cut(s) 1406, 1543
BsoBI CYCGRG 2 cut(s) 1188, 2156
Bsp119I TTCGAA 1 cut(s) 195
Bsp120I GGGCCC 1 cut(s) 1383
Bsp1286I GDGCHC 3 cut(s) 111, 132, 1387
Bsp13I TCCGGA 1 cut(s) 111
Bsp143I GATC 5 cut(s) 919, 1324, 1577, 1908, 2116
BspACI CCGC 6 cut(s) 139, 232, 1217, 1279, 1676, 2177
BspANI GGCC 5 cut(s) 137, 206, 236, 1025, 1385
BspCNI CTCAG 5 cut(s) 180, 214, 1402, 1600, 1870
BspDI ATCGAT 3 cut(s) 464, 489, 557
BspEI TCCGGA 1 cut(s) 111
BspFNI CGCG 2 cut(s) 141, 2320
BspHI TCATGA 1 cut(s) 963
BspLI GGNNCC 7 cut(s) 110, 116, 122, 1385, 1449, 2238, 2251
BspQI GCTCTTC 2 cut(s) 288, 717
BspT104I TTCGAA 1 cut(s) 195
BspT107I GGYRCC 1 cut(s) 2236
BspTI CTTAAG 1 cut(s) 1019
BspTNI GGTCTC 2 cut(s) 1406, 1543
BsrDI GCAATG 1 cut(s) 1065
BsrI ACTGG 4 cut(s) 1229, 1467, 1598, 2253
BssECI CCNNGG 2 cut(s) 207, 1387
BssMI GATC 5 cut(s) 919, 1324, 1577, 1908, 2116
BssNI GRCGYC 1 cut(s) 2237
BssT1I CCWWGG 2 cut(s) 207, 1387
Bst2UI CCWGG 2 cut(s) 125, 134
Bst4CI ACNGT 3 cut(s) 825, 1123, 1444
Bst6I CTCTTC 6 cut(s) 288, 717, 855, 974, 1157, 1492
BstACI GRCGYC 1 cut(s) 2237
BstAFI CTTAAG 1 cut(s) 1019
BstAPI GCANNNNNTGC 1 cut(s) 766
BstBAI YACGTR 2 cut(s) 910, 1293
BstBI TTCGAA 1 cut(s) 195
BstC8I GCNNGC 4 cut(s) 139, 234, 953, 2322
BstDEI CTNAG 8 cut(s) 188, 201, 266, 1233, 1410, 1587, 1857, 2120
BstENI CCTNNNNNAGG 1 cut(s) 704
BstF5I GGATG 7 cut(s) 75, 614, 646, 946, 1060, 1960, 2038
BstFNI CGCG 2 cut(s) 141, 2320
BstH2I RGCGCY 1 cut(s) 2240
BstHHI GCGC 1 cut(s) 2239
BstKTI GATC 5 cut(s) 922, 1327, 1580, 1911, 2119
BstMAI GTCTC 5 cut(s) 267, 394, 1406, 1543, 1760
BstMBI GATC 5 cut(s) 919, 1324, 1577, 1908, 2116
BstMWI GCNNNNNNNGC 3 cut(s) 766, 1472, 2347
BstNI CCWGG 2 cut(s) 125, 134
BstNSI RCATGY 4 cut(s) 896, 1519, 1559, 1645
BstSCI CCNGG 4 cut(s) 98, 116, 123, 132
BstSFI CTRYAG 1 cut(s) 1872
BstSLI GKGCMC 1 cut(s) 1387
BstSNI TACGTA 2 cut(s) 910, 1293
BstUI CGCG 2 cut(s) 141, 2320
BstV1I GCAGC 2 cut(s) 1730, 2073
BstV2I GAAGAC 1 cut(s) 87
BstX2I RGATCY 2 cut(s) 1324, 1908
BstYI RGATCY 2 cut(s) 1324, 1908
Bsu15I ATCGAT 3 cut(s) 464, 489, 557
BsuRI GGCC 5 cut(s) 137, 206, 236, 1025, 1385
BsuTUI ATCGAT 3 cut(s) 464, 489, 557
BtsCI GGATG 7 cut(s) 75, 614, 646, 946, 1060, 1960, 2038
BtsIMutI CAGTG 3 cut(s) 697, 821, 1460
Cac8I GCNNGC 4 cut(s) 139, 234, 953, 2322
CciI TCATGA 1 cut(s) 963
CfoI GCGC 1 cut(s) 2239
Cfr13I GGNCC 6 cut(s) 114, 136, 234, 1383, 1384, 1685
ClaI ATCGAT 3 cut(s) 464, 489, 557
CseI GACGC 2 cut(s) 760, 1897
Csp6I GTAC 3 cut(s) 665, 1591, 2316
CviQI GTAC 3 cut(s) 665, 1591, 2316
DdeI CTNAG 8 cut(s) 188, 201, 266, 1233, 1410, 1587, 1857, 2120
DinI GGCGCC 1 cut(s) 2238
DpnI GATC 5 cut(s) 921, 1326, 1579, 1910, 2118
DpnII GATC 5 cut(s) 919, 1324, 1577, 1908, 2116
Eam1104I CTCTTC 6 cut(s) 288, 717, 855, 974, 1157, 1492
EarI CTCTTC 6 cut(s) 288, 717, 855, 974, 1157, 1492
Ecl136II GAGCTC 1 cut(s) 130
Eco105I TACGTA 2 cut(s) 910, 1293
Eco130I CCWWGG 2 cut(s) 207, 1387
Eco147I AGGCCT 1 cut(s) 1025
Eco24I GRGCYC 3 cut(s) 111, 132, 1387
Eco31I GGTCTC 2 cut(s) 1406, 1543
Eco32I GATATC 1 cut(s) 1854
Eco47I GGWCC 2 cut(s) 114, 1685
Eco53kI GAGCTC 1 cut(s) 130
Eco57I CTGAAG 3 cut(s) 569, 650, 2234
Eco88I CYCGRG 2 cut(s) 1188, 2156
EcoICRI GAGCTC 1 cut(s) 130
EcoNI CCTNNNNNAGG 1 cut(s) 704
EcoO109I RGGNCCY 2 cut(s) 1383, 1384
EcoRII CCWGG 2 cut(s) 123, 132
EcoRV GATATC 1 cut(s) 1854
EcoT14I CCWWGG 2 cut(s) 207, 1387
EcoT22I ATGCAT 2 cut(s) 771, 2141
EcoT38I GRGCYC 3 cut(s) 111, 132, 1387
EgeI GGCGCC 1 cut(s) 2238
EheI GGCGCC 1 cut(s) 2238
ErhI CCWWGG 2 cut(s) 207, 1387
FalI AAGNNNNNCTT 2 cut(s) 282, 314
FaqI GGGAC 1 cut(s) 811
FauI CCCGC 2 cut(s) 146, 225
FauNDI CATATG 2 cut(s) 1798, 2173
FbaI TGATCA 1 cut(s) 919
FblI GTMKAC 1 cut(s) 2100
Fnu4HI GCNGC 5 cut(s) 1218, 1280, 1719, 2062, 2342
FokI GGATG 7 cut(s) 82, 621, 653, 953, 1067, 1967, 2045
FriOI GRGCYC 3 cut(s) 111, 132, 1387
Fsp4HI GCNGC 5 cut(s) 1218, 1280, 1719, 2062, 2342
FspBI CTAG 3 cut(s) 1245, 1985, 2301
GlaI GCGC 1 cut(s) 2238
GluI GCNGC 5 cut(s) 1218, 1280, 1719, 2062, 2342
GsaI CCCAGC 3 cut(s) 1040, 1550, 2130
GsuI CTGGAG 2 cut(s) 116, 2236
HaeII RGCGCY 1 cut(s) 2240
HaeIII GGCC 5 cut(s) 137, 206, 236, 1025, 1385
HapII CCGG 3 cut(s) 100, 112, 118
HgaI GACGC 2 cut(s) 760, 1897
HhaI GCGC 1 cut(s) 2239
Hin1I GRCGYC 1 cut(s) 2237
Hin6I GCGC 1 cut(s) 2237
HinP1I GCGC 1 cut(s) 2237
HindIII AAGCTT 1 cut(s) 1838
HpaII CCGG 3 cut(s) 100, 112, 118
HphI GGTGA 6 cut(s) 190, 727, 1164, 1204, 1665, 1861
Hpy166II GTNNAC 2 cut(s) 779, 2101
Hpy188III TCNNGA 7 cut(s) 112, 623, 964, 1091, 1561, 1844, 2156
Hpy8I GTNNAC 2 cut(s) 779, 2101
Hpy99I CGWCG 1 cut(s) 754
HpyCH4III ACNGT 3 cut(s) 825, 1123, 1444
HpyCH4IV ACGT 3 cut(s) 909, 1292, 1624
HpyF10VI GCNNNNNNNGC 3 cut(s) 766, 1472, 2347
HpyF3I CTNAG 8 cut(s) 188, 201, 266, 1233, 1410, 1587, 1857, 2120
HpySE526I ACGT 3 cut(s) 909, 1292, 1624
Hsp92I GRCGYC 1 cut(s) 2237
HspAI GCGC 1 cut(s) 2237
KasI GGCGCC 1 cut(s) 2236
Kpn2I TCCGGA 1 cut(s) 111
Ksp22I TGATCA 1 cut(s) 919
Kzo9I GATC 5 cut(s) 919, 1324, 1577, 1908, 2116
LguI GCTCTTC 2 cut(s) 288, 717
LmnI GCTCC 8 cut(s) 73, 114, 127, 135, 598, 757, 2001, 2255
Lsp1109I GCAGC 2 cut(s) 1730, 2073
MaeI CTAG 3 cut(s) 1245, 1985, 2301
MaeII ACGT 3 cut(s) 909, 1292, 1624
MaeIII GTNAC 2 cut(s) 1170, 2053
MalI GATC 5 cut(s) 921, 1326, 1579, 1910, 2118
MboI GATC 5 cut(s) 919, 1324, 1577, 1908, 2116
MflI RGATCY 2 cut(s) 1324, 1908
MhlI GDGCHC 3 cut(s) 111, 132, 1387
MluCI AATT 9 cut(s) 335, 584, 869, 884, 1014, 1043, 1179, 1756, 2221
MluI ACGCGT 1 cut(s) 2318
Mly113I GGCGCC 1 cut(s) 2237
MlyI GAGTC 6 cut(s) 86, 165, 259, 269, 448, 656
MmeI TCCRAC 5 cut(s) 153, 237, 795, 1632, 1942
Mph1103I ATGCAT 2 cut(s) 771, 2141
MroI TCCGGA 1 cut(s) 111
MroXI GAANNNNTTC 2 cut(s) 490, 988
MseI TTAA 7 cut(s) 306, 1020, 1182, 1287, 2015, 2066, 2091
MslI CAYNNNNRTG 4 cut(s) 939, 1605, 1896, 2186
MspA1I CMGCKG 1 cut(s) 2203
MspCI CTTAAG 1 cut(s) 1019
MspI CCGG 3 cut(s) 100, 112, 118
MspR9I CCNGG 4 cut(s) 100, 118, 125, 134
Mva1269I GAATGC 3 cut(s) 479, 701, 930
MvaI CCWGG 2 cut(s) 125, 134
MvnI CGCG 2 cut(s) 141, 2320
MwoI GCNNNNNNNGC 3 cut(s) 766, 1472, 2347
NarI GGCGCC 1 cut(s) 2237
NciI CCSGG 2 cut(s) 100, 118
NdeI CATATG 2 cut(s) 1798, 2173
NdeII GATC 5 cut(s) 919, 1324, 1577, 1908, 2116
NlaIV GGNNCC 7 cut(s) 110, 116, 122, 1385, 1449, 2238, 2251
NmeAIII GCCGAG 1 cut(s) 2213
NmuCI GTSAC 1 cut(s) 1170
NsiI ATGCAT 2 cut(s) 771, 2141
NspI RCATGY 4 cut(s) 896, 1519, 1559, 1645
NspV TTCGAA 1 cut(s) 195
PaeR7I CTCGAG 1 cut(s) 2156
PagI TCATGA 1 cut(s) 963
PceI AGGCCT 1 cut(s) 1025
PciI ACATGT 3 cut(s) 1515, 1555, 1641
PciSI GCTCTTC 2 cut(s) 288, 717
PctI GAATGC 3 cut(s) 479, 701, 930
PdmI GAANNNNTTC 2 cut(s) 490, 988
PflMI CCANNNNNTGG 2 cut(s) 790, 2246
PfoI TCCNGGA 1 cut(s) 123
PkrI GCNGC 5 cut(s) 1219, 1281, 1720, 2063, 2343
PleI GAGTC 6 cut(s) 86, 164, 258, 268, 448, 655
PluTI GGCGCC 1 cut(s) 2240
PpsI GAGTC 6 cut(s) 86, 164, 258, 268, 448, 655
Ppu21I YACGTR 2 cut(s) 910, 1293
PscI ACATGT 3 cut(s) 1515, 1555, 1641
PshBI ATTAAT 1 cut(s) 1182
PsiI TTATAA 1 cut(s) 1835
Psp124BI GAGCTC 1 cut(s) 132
Psp6I CCWGG 2 cut(s) 123, 132
PspFI CCCAGC 3 cut(s) 1036, 1546, 2126
PspGI CCWGG 2 cut(s) 123, 132
PspN4I GGNNCC 7 cut(s) 110, 116, 122, 1385, 1449, 2238, 2251
PspOMI GGGCCC 1 cut(s) 1383
PspPI GGNCC 6 cut(s) 114, 136, 234, 1383, 1384, 1685
PsuI RGATCY 2 cut(s) 1324, 1908
PvuII CAGCTG 1 cut(s) 2203
RsaI GTAC 3 cut(s) 666, 1592, 2317
RsaNI GTAC 3 cut(s) 665, 1591, 2316
RseI CAYNNNNRTG 4 cut(s) 939, 1605, 1896, 2186
SacI GAGCTC 1 cut(s) 132
SapI GCTCTTC 2 cut(s) 288, 717
SaqAI TTAA 7 cut(s) 306, 1020, 1182, 1287, 2015, 2066, 2091
SatI GCNGC 5 cut(s) 1218, 1280, 1719, 2062, 2342
Sau3AI GATC 5 cut(s) 919, 1324, 1577, 1908, 2116
Sau96I GGNCC 6 cut(s) 114, 136, 234, 1383, 1384, 1685
ScaI AGTACT 2 cut(s) 666, 1592
SchI GAGTC 6 cut(s) 86, 165, 259, 269, 448, 656
ScrFI CCNGG 4 cut(s) 100, 118, 125, 134
SduI GDGCHC 3 cut(s) 111, 132, 1387
SfcI CTRYAG 1 cut(s) 1872
SfoI GGCGCC 1 cut(s) 2238
Sfr274I CTCGAG 1 cut(s) 2156
SfuI TTCGAA 1 cut(s) 195
SinI GGWCC 2 cut(s) 114, 1685
SlaI CTCGAG 1 cut(s) 2156
SmiMI CAYNNNNRTG 4 cut(s) 939, 1605, 1896, 2186
SmlI CTYRAG 4 cut(s) 623, 1019, 1844, 2156
SmoI CTYRAG 4 cut(s) 623, 1019, 1844, 2156
SnaBI TACGTA 2 cut(s) 910, 1293
Sse9I AATT 9 cut(s) 335, 584, 869, 884, 1014, 1043, 1179, 1756, 2221
SseBI AGGCCT 1 cut(s) 1025
SsiI CCGC 6 cut(s) 139, 232, 1217, 1279, 1676, 2177
SspDI GGCGCC 1 cut(s) 2236
SspMI CTAG 3 cut(s) 1245, 1985, 2301
SstI GAGCTC 1 cut(s) 132
StuI AGGCCT 1 cut(s) 1025
StyD4I CCNGG 4 cut(s) 98, 116, 123, 132
StyI CCWWGG 2 cut(s) 207, 1387
TaaI ACNGT 3 cut(s) 825, 1123, 1444
TaiI ACGT 3 cut(s) 912, 1295, 1627
TaqI TCGA 8 cut(s) 195, 452, 464, 489, 494, 557, 1307, 2157
TasI AATT 9 cut(s) 335, 584, 869, 884, 1014, 1043, 1179, 1756, 2221
TatI WGTACW 2 cut(s) 664, 1590
TauI GCSGC 2 cut(s) 1220, 1282
Tru1I TTAA 7 cut(s) 306, 1020, 1182, 1287, 2015, 2066, 2091
Tru9I TTAA 7 cut(s) 306, 1020, 1182, 1287, 2015, 2066, 2091
TscAI CASTG 3 cut(s) 697, 828, 1467
TseFI GTSAC 1 cut(s) 1170
TseI GCWGC 3 cut(s) 1718, 2061, 2341
Tsp45I GTSAC 1 cut(s) 1170
TspGWI ACGGA 1 cut(s) 149
TspRI CASTG 3 cut(s) 697, 828, 1467
Van91I CCANNNNNTGG 2 cut(s) 790, 2246
Vha464I CTTAAG 1 cut(s) 1019
VpaK11BI GGWCC 2 cut(s) 114, 1685
VspI ATTAAT 1 cut(s) 1182
XagI CCTNNNNNAGG 1 cut(s) 704
XapI RAATTY 1 cut(s) 1756
XceI RCATGY 4 cut(s) 896, 1519, 1559, 1645
XhoI CTCGAG 1 cut(s) 2156
XmiI GTMKAC 1 cut(s) 2100
XmnI GAANNNNTTC 2 cut(s) 490, 988
XspI CTAG 3 cut(s) 1245, 1985, 2301
ZrmI AGTACT 2 cut(s) 666, 1592
Zsp2I ATGCAT 2 cut(s) 771, 2141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.