Rh7BG430500

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0000126
Physical Location & Seq
Reverse (-)
49286450 .. 49291168
4719 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG430500.1

Sequence Viewer

Length: 1278 bp
ATGAGTTTGAGGTGTATGAGAAAGAGTTGTGTTCTGTTGTTGCAGGAGTTGAAGAGAATGACGTCGCCGCAAATTAGTGCTCCGGTGAGAGAGGAGGCAAAGAAGTTAGCAGCTGAGTGGAAAGCGAAGATGAAGGAGGGCAGTGAGAATAGTTGGGAGGCCAAAGGGCTTCTGCGGCTCATTGCTGCTTATGGTTTGGATGGTGTTTGTGATGCTGAGGAGCTTCAGAGTCTTGTTGCTATGGTGGAGCAGCCGGAACAGTCTAGTGAACTAAGAAGGACTCTTGGTTTGACAGATGAGGCACCAGGGACCAATGCCAATTCTTCCATTGTTAAGATCGAGGGACGAGAATCCCCTCTTGCTAGAAATGCAGCGACTCTTTCTTCTCCGAATCATTCTTTGCCGAATGACATGTTGGTTTCTCTTAAGTCGTCATCGGATAAGGCAAAACTTGTGTTGAAATTGATAAAAAGATCTTTAACCCAATACTGGACAAATGGTGATGTTGGCTCCAAAGAAACGGTTGTATCGAGTAACATTTCTCTATTGAATTTTCTAATGGGAGCCTCAGCTCATGTTGGACCTCATCTGAAAGATGCTGCAACAAATCTAGCAGCCCAGTGGAAAGCAAATATGACAGCTGATACTGAAAACTCATTGGAGAATTTGGGATTTTCGCTGTTTATAGCTATATATGGATTGCTTTCTACTTTAAACGAAGATGAGATTGTAAAGCTTCTTGGAAAGATTTCACAGCATAAACAGTCCCTAGAATTATGTCAGACACATGGTTTTGCAGATAAGATTGCTGGTCTTATTGGGAAACTTATTGAAACGAAGCAAGTGATTGACGCTGTTAGATCGATTTGTTTGTTCAAGTTGATTGACAAGTTTCCCCCAGTACCGTTGTTAAAAGCATATGTACAAGATGCAAAGGAGTGGTCCGAATTAGTTTGCAGCTTAAAGATATCAGATGCTGAAAAGGAGAAGGCTGTAAATGGAAAAATAGCTGATCTTAGAGCTGTCATTCAATGCATCAAAGATTGCAACCTTGAGTCTGAATACCCGTCCATGACTGTTGAAATGCAAATAGATCAGCTGCAAATACTCGAGGAGAATTGGAGACCATCTTGTGTCTCCAAAGTTAAACAACAAGAGAGAAAAAGGAAGAGACCTAATATCAGCTGTAGGTGCATATTAGCTGAGAAAGTCAAGCTTCCCATTTTAAATCATCAAGGTAATTTTCTGATGCATAATTTAGGCCCAGATCTTCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida TEX13

Protein Analysis

425

Amino Acids

47.06

Weight (kDa)

8.37

Isoelectric Point (pI)

47.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 3 - 102 3.4e-22 Frigida-like protein
Frigida PF07899 133 - 368 3.1e-52 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 65
AccB1I GGYRCC 1 cut(s) 301
AciI CCGC 2 cut(s) 68, 175
AcsI RAATTY 2 cut(s) 550, 664
AcuI CTGAAG 1 cut(s) 209
AcyI GRCGYC 1 cut(s) 62
AfaI GTAC 2 cut(s) 903, 924
AfiI CCNNNNNNNGG 1 cut(s) 489
AflII CTTAAG 1 cut(s) 425
AflIII ACRYGT 1 cut(s) 411
AgsI TTSAA 7 cut(s) 52, 460, 550, 833, 877, 1031, 1082
AjnI CCWGG 1 cut(s) 304
AjuI GAANNNNNNNTTGG 2 cut(s) 398, 430
Alw21I GWGCWC 1 cut(s) 82
Alw26I GTCTC 3 cut(s) 1117, 1141, 1165
AlwNI CAGNNNCTG 1 cut(s) 977
Ama87I CYCGRG 1 cut(s) 1109
AoxI GGCC 2 cut(s) 159, 1261
ApeKI GCWGC 8 cut(s) 110, 185, 250, 371, 599, 614, 957, 1099
ApoI RAATTY 2 cut(s) 550, 664
ArsI GACNNNNNNTTYG 4 cut(s) 271, 303, 926, 958
Asp700I GAANNNNTTC 1 cut(s) 748
AspS9I GGNCC 4 cut(s) 309, 581, 942, 1262
AsuHPI GGTGA 2 cut(s) 97, 512
AvaI CYCGRG 1 cut(s) 1109
AvaII GGWCC 3 cut(s) 309, 581, 942
BaeI ACNNNNGTAYC 2 cut(s) 510, 543
BanI GGYRCC 1 cut(s) 301
Bbv12I GWGCWC 1 cut(s) 82
BbvCI CCTCAGC 2 cut(s) 216, 568
BbvI GCAGC 8 cut(s) 122, 172, 262, 383, 586, 626, 969, 1086
BccI CCATC 2 cut(s) 194, 1135
BciT130I CCWGG 1 cut(s) 306
BcoDI GTCTC 3 cut(s) 1117, 1141, 1165
BfaI CTAG 4 cut(s) 264, 363, 611, 770
BfmI CTRYAG 1 cut(s) 1186
BfrI CTTAAG 1 cut(s) 425
BglII AGATCT 2 cut(s) 473, 1267
Bme1390I CCNGG 1 cut(s) 306
Bme18I GGWCC 3 cut(s) 309, 581, 942
BmeT110I CYCGRG 1 cut(s) 1109
BmgT120I GGNCC 4 cut(s) 309, 581, 942, 1262
BmiI GGNNCC 4 cut(s) 303, 310, 511, 565
BmrFI CCNGG 1 cut(s) 306
BmrI ACTGGG 2 cut(s) 613, 893
BmsI GCATC 6 cut(s) 202, 586, 919, 964, 1044, 1239
BmuI ACTGGG 2 cut(s) 613, 893
Bpu10I CCTNAGC 2 cut(s) 216, 568
BpuEI CTTGAG 1 cut(s) 1073
Bsa29I ATCGAT 1 cut(s) 863
BsaHI GRCGYC 1 cut(s) 62
BsaI GGTCTC 2 cut(s) 1117, 1165
BsaJI CCNNGG 1 cut(s) 305
BsaWI WCCGGW 1 cut(s) 82
Bsc4I CCNNNNNNNGG 1 cut(s) 489
Bse1I ACTGG 3 cut(s) 494, 619, 899
Bse3DI GCAATG 1 cut(s) 180
BseBI CCWGG 1 cut(s) 306
BseCI ATCGAT 1 cut(s) 863
BseDI CCNNGG 1 cut(s) 305
BseGI GGATG 1 cut(s) 205
BseLI CCNNNNNNNGG 1 cut(s) 489
BseMI GCAATG 1 cut(s) 180
BseMII CTCAG 4 cut(s) 105, 207, 582, 1194
BseNI ACTGG 3 cut(s) 494, 619, 899
BseRI GAGGAG 3 cut(s) 107, 233, 1127
BseXI GCAGC 8 cut(s) 122, 172, 262, 383, 586, 626, 969, 1086
BshFI GGCC 2 cut(s) 161, 1263
BshNI GGYRCC 1 cut(s) 301
BshVI ATCGAT 1 cut(s) 863
BsiHKAI GWGCWC 1 cut(s) 82
BsiHKCI CYCGRG 1 cut(s) 1109
BsiSI CCGG 2 cut(s) 83, 254
BslFI GGGAC 3 cut(s) 322, 357, 751
BslI CCNNNNNNNGG 1 cut(s) 489
BsmAI GTCTC 3 cut(s) 1117, 1141, 1165
BsmFI GGGAC 3 cut(s) 322, 357, 751
BsnI GGCC 2 cut(s) 161, 1263
Bso31I GGTCTC 2 cut(s) 1117, 1165
BsoBI CYCGRG 1 cut(s) 1109
Bsp1286I GDGCHC 1 cut(s) 82
Bsp1407I TGTACA 1 cut(s) 922
Bsp143I GATC 6 cut(s) 336, 473, 860, 1012, 1093, 1267
BspACI CCGC 2 cut(s) 68, 175
BspANI GGCC 2 cut(s) 161, 1263
BspCNI CTCAG 4 cut(s) 106, 208, 581, 1195
BspDI ATCGAT 1 cut(s) 863
BspLI GGNNCC 4 cut(s) 303, 310, 511, 565
BspT107I GGYRCC 1 cut(s) 301
BspTI CTTAAG 1 cut(s) 425
BspTNI GGTCTC 2 cut(s) 1117, 1165
BsrDI GCAATG 1 cut(s) 180
BsrGI TGTACA 1 cut(s) 922
BsrI ACTGG 3 cut(s) 494, 619, 899
BssECI CCNNGG 1 cut(s) 305
BssMI GATC 6 cut(s) 336, 473, 860, 1012, 1093, 1267
BssNI GRCGYC 1 cut(s) 62
Bst2UI CCWGG 1 cut(s) 306
Bst4CI ACNGT 5 cut(s) 261, 523, 765, 906, 1078
Bst6I CTCTTC 2 cut(s) 47, 1163
BstACI GRCGYC 1 cut(s) 62
BstAFI CTTAAG 1 cut(s) 425
BstAUI TGTACA 1 cut(s) 922
BstDEI CTNAG 6 cut(s) 114, 216, 272, 568, 1016, 1203
BstF5I GGATG 1 cut(s) 205
BstKTI GATC 6 cut(s) 339, 476, 863, 1015, 1096, 1270
BstMAI GTCTC 3 cut(s) 1117, 1141, 1165
BstMBI GATC 6 cut(s) 336, 473, 860, 1012, 1093, 1267
BstMWI GCNNNNNNNGC 3 cut(s) 175, 368, 1191
BstNI CCWGG 1 cut(s) 306
BstNSI RCATGY 1 cut(s) 415
BstSCI CCNGG 1 cut(s) 304
BstSFI CTRYAG 1 cut(s) 1186
BstV1I GCAGC 8 cut(s) 122, 172, 262, 383, 586, 626, 969, 1086
BstX2I RGATCY 2 cut(s) 473, 1267
BstYI RGATCY 2 cut(s) 473, 1267
Bsu15I ATCGAT 1 cut(s) 863
BsuRI GGCC 2 cut(s) 161, 1263
BsuTUI ATCGAT 1 cut(s) 863
BtsCI GGATG 1 cut(s) 205
BtsI GCAGTG 1 cut(s) 148
BtsIMutI CAGTG 2 cut(s) 148, 626
CaiI CAGNNNCTG 1 cut(s) 977
Cfr13I GGNCC 4 cut(s) 309, 581, 942, 1262
ClaI ATCGAT 1 cut(s) 863
CseI GACGC 1 cut(s) 860
Csp6I GTAC 2 cut(s) 902, 923
CviAII CATG 4 cut(s) 412, 575, 788, 1072
CviQI GTAC 2 cut(s) 902, 923
DdeI CTNAG 6 cut(s) 114, 216, 272, 568, 1016, 1203
DpnI GATC 6 cut(s) 338, 475, 862, 1014, 1095, 1269
DpnII GATC 6 cut(s) 336, 473, 860, 1012, 1093, 1267
DraI TTTAAA 2 cut(s) 714, 1227
Eam1104I CTCTTC 2 cut(s) 47, 1163
EarI CTCTTC 2 cut(s) 47, 1163
Eco31I GGTCTC 2 cut(s) 1117, 1165
Eco32I GATATC 1 cut(s) 969
Eco47I GGWCC 3 cut(s) 309, 581, 942
Eco57I CTGAAG 1 cut(s) 209
Eco88I CYCGRG 1 cut(s) 1109
EcoRII CCWGG 1 cut(s) 304
EcoRV GATATC 1 cut(s) 969
EcoT22I ATGCAT 2 cut(s) 1037, 1254
FaeI CATG 4 cut(s) 415, 578, 791, 1075
FalI AAGNNNNNCTT 2 cut(s) 1200, 1232
FaqI GGGAC 3 cut(s) 322, 357, 751
FatI CATG 4 cut(s) 411, 574, 787, 1071
FauNDI CATATG 1 cut(s) 919
FokI GGATG 1 cut(s) 212
FspBI CTAG 4 cut(s) 264, 363, 611, 770
HaeIII GGCC 2 cut(s) 161, 1263
HapII CCGG 2 cut(s) 83, 254
HgaI GACGC 1 cut(s) 860
Hin1I GRCGYC 1 cut(s) 62
Hin1II CATG 4 cut(s) 415, 578, 791, 1075
HindIII AAGCTT 2 cut(s) 734, 1214
HinfI GANTC 6 cut(s) 229, 280, 350, 376, 391, 1055
HpaII CCGG 2 cut(s) 83, 254
HphI GGTGA 2 cut(s) 97, 512
Hpy166II GTNNAC 1 cut(s) 269
Hpy188I TCNGA 9 cut(s) 228, 390, 439, 591, 783, 946, 973, 1060, 1248
Hpy8I GTNNAC 1 cut(s) 269
Hpy99I CGWCG 1 cut(s) 67
HpyAV CCTTC 3 cut(s) 127, 270, 982
HpyCH4III ACNGT 5 cut(s) 261, 523, 765, 906, 1078
HpyCH4IV ACGT 1 cut(s) 62
HpyF10VI GCNNNNNNNGC 3 cut(s) 175, 368, 1191
HpyF3I CTNAG 6 cut(s) 114, 216, 272, 568, 1016, 1203
HpySE526I ACGT 1 cut(s) 62
Hsp92I GRCGYC 1 cut(s) 62
Hsp92II CATG 4 cut(s) 415, 578, 791, 1075
Kzo9I GATC 6 cut(s) 336, 473, 860, 1012, 1093, 1267
LmnI GCTCC 5 cut(s) 85, 220, 247, 515, 563
LpnPI CCDG 9 cut(s) 29, 96, 267, 291, 318, 475, 632, 795, 912
Lsp1109I GCAGC 8 cut(s) 122, 172, 262, 383, 586, 626, 969, 1086
LweI GCATC 6 cut(s) 202, 586, 919, 964, 1044, 1239
MaeI CTAG 4 cut(s) 264, 363, 611, 770
MaeII ACGT 1 cut(s) 62
MaeIII GTNAC 1 cut(s) 533
MalI GATC 6 cut(s) 338, 475, 862, 1014, 1095, 1269
MboI GATC 6 cut(s) 336, 473, 860, 1012, 1093, 1267
MboII GAAGA 7 cut(s) 64, 139, 315, 375, 731, 1180, 1262
MflI RGATCY 2 cut(s) 473, 1267
MhlI GDGCHC 1 cut(s) 82
MlyI GAGTC 4 cut(s) 238, 274, 370, 1064
MmeI TCCRAC 1 cut(s) 559
Mph1103I ATGCAT 2 cut(s) 1037, 1254
MroXI GAANNNNTTC 1 cut(s) 748
MseI TTAA 9 cut(s) 333, 426, 479, 713, 911, 962, 1146, 1226, 1276
MspA1I CMGCKG 4 cut(s) 113, 641, 1099, 1185
MspCI CTTAAG 1 cut(s) 425
MspI CCGG 2 cut(s) 83, 254
MspR9I CCNGG 1 cut(s) 306
MvaI CCWGG 1 cut(s) 306
MwoI GCNNNNNNNGC 3 cut(s) 175, 368, 1191
NdeI CATATG 1 cut(s) 919
NdeII GATC 6 cut(s) 336, 473, 860, 1012, 1093, 1267
NlaIII CATG 4 cut(s) 415, 578, 791, 1075
NlaIV GGNNCC 4 cut(s) 303, 310, 511, 565
NsiI ATGCAT 2 cut(s) 1037, 1254
NspI RCATGY 1 cut(s) 415
PaeR7I CTCGAG 1 cut(s) 1109
PciI ACATGT 1 cut(s) 411
PcsI WCGNNNNNNNCGW 1 cut(s) 527
PdmI GAANNNNTTC 1 cut(s) 748
PfeI GAWTC 2 cut(s) 350, 391
PleI GAGTC 4 cut(s) 237, 274, 370, 1063
PpsI GAGTC 4 cut(s) 237, 274, 370, 1063
PscI ACATGT 1 cut(s) 411
Psp6I CCWGG 1 cut(s) 304
PspGI CCWGG 1 cut(s) 304
PspN4I GGNNCC 4 cut(s) 303, 310, 511, 565
PspPI GGNCC 4 cut(s) 309, 581, 942, 1262
PspXI VCTCGAGB 1 cut(s) 1109
PstNI CAGNNNCTG 1 cut(s) 977
PsuI RGATCY 2 cut(s) 473, 1267
PvuII CAGCTG 4 cut(s) 113, 641, 1099, 1185
RsaI GTAC 2 cut(s) 903, 924
RsaNI GTAC 2 cut(s) 902, 923
SaqAI TTAA 9 cut(s) 333, 426, 479, 713, 911, 962, 1146, 1226, 1276
Sau3AI GATC 6 cut(s) 336, 473, 860, 1012, 1093, 1267
Sau96I GGNCC 4 cut(s) 309, 581, 942, 1262
SchI GAGTC 4 cut(s) 238, 274, 370, 1064
ScrFI CCNGG 1 cut(s) 306
SduI GDGCHC 1 cut(s) 82
SfaNI GCATC 6 cut(s) 202, 586, 919, 964, 1044, 1239
SfcI CTRYAG 1 cut(s) 1186
Sfr274I CTCGAG 1 cut(s) 1109
SinI GGWCC 3 cut(s) 309, 581, 942
SlaI CTCGAG 1 cut(s) 1109
SmlI CTYRAG 3 cut(s) 425, 1052, 1109
SmoI CTYRAG 3 cut(s) 425, 1052, 1109
SsiI CCGC 2 cut(s) 68, 175
SspMI CTAG 4 cut(s) 264, 363, 611, 770
StyD4I CCNGG 1 cut(s) 304
TaaI ACNGT 5 cut(s) 261, 523, 765, 906, 1078
TaiI ACGT 1 cut(s) 65
TaqI TCGA 4 cut(s) 339, 530, 863, 1110
TatI WGTACW 1 cut(s) 922
TauI GCSGC 2 cut(s) 70, 178
TfiI GAWTC 2 cut(s) 350, 391
Tru1I TTAA 9 cut(s) 333, 426, 479, 713, 911, 962, 1146, 1226, 1276
Tru9I TTAA 9 cut(s) 333, 426, 479, 713, 911, 962, 1146, 1226, 1276
TscAI CASTG 2 cut(s) 148, 626
TseI GCWGC 8 cut(s) 110, 185, 250, 371, 599, 614, 957, 1099
TspDTI ATGAA 1 cut(s) 146
TspRI CASTG 2 cut(s) 148, 626
Vha464I CTTAAG 1 cut(s) 425
VpaK11BI GGWCC 3 cut(s) 309, 581, 942
XapI RAATTY 2 cut(s) 550, 664
XceI RCATGY 1 cut(s) 415
XhoI CTCGAG 1 cut(s) 1109
XmnI GAANNNNTTC 1 cut(s) 748
XspI CTAG 4 cut(s) 264, 363, 611, 770
ZraI GACGTC 1 cut(s) 63
Zsp2I ATGCAT 2 cut(s) 1037, 1254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.