RchiOBHm_Chr7g0237441

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000126
Physical Location & Seq
Reverse (-)
62452346 .. 62455370
3025 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21281

Sequence Viewer

Length: 1686 bp
ATGTCTTCCGTACAGTTAGGGTTTTCAGAGGCGATGGTCGAAGTCGCAGCGACCGAGGCTGACGTCGGCATTGCGTGTCAGACCGTGCAATCCCATCTCTCTTACCTCGTTGATCAAGTGAGCTTGGGGCTGGGGATGAGCACGGAGCATCTAGGTTCGAGGGAGGAGAGGCTCAACCAACGCCTGCGCGAGGTTGAATTGAAAGAAAAGCAGTTGGATTTACTCCACCGAAGACTCAAAAGGAGGGAGAAGAAAGTTGAAGAGCTCAGGTTGAAACAATTCGAGCCTCGAGTCAAGACGGAGGAGGATCAATCTATCATGAACATGGACTGTCGCGAGTTGCTGGTGTTCGTGAATGAGCAATTCAGAATAATTGATTTGGCGGGAACCCGGATGTCGGCTGTTCTTCAAGCATCTCCAGACCCCGGAAAGATGGTTCTGGAAGGAGTGCGAGGGTTTTGTCCTTCGAATCGGAATGTGGATGGAAGACAGACTGAAATGAGTTTGAGGTGTATGAGAAAGAGTTGTGTTCTGTTGTTGCAGGAGTTGAAGAGAATGTCGCCGCAAATTAGTGCTCCGGTGAGAGAGGAGGCAAGGAAGTTAGCAGCTGAGTGGAAAGCGAAGATGAAGGAGGGCAGTGAGAATAGTTGGGAGGCCAAGGGGCTTTTGCGGCTCATTGCTGCTTATGGATTGGATGGTATTATTTGTGATGCTGAGGAGCTTCAGAGTCTTGTTGCTATGGTGGAGCAGCCGGAACAATCTAGTGAACTAAGAAGGACTCTTGGTTTGACAAATGGGGCACCGGGGACCAATGCCAATTCTTCCATTGTTAAGATCGAGGGACGAGAATCCTCTCTTGCTAGAAATGCAGCGACTCTTTCTTCTCCGAATCATTCTTTGCCGAATGACATGTTGGTTTCTCTTAAGTCGTCATCGGATAAGGCAAAACTTGTGTTGAAATTGATAAAAAGATCTTTAACCCAATACTGGACAAATGGTGATGTTAGCTCCAAAGAAATGGTTGTATTGAGTAACATTTCTCTATTGAATTTTCTAATGGGAGCCTCAGCTCATGTTGGACCTCATCTGAAAGATGGTGCAACAAATCTAGCAGCCCAGTGGAAAGCAAATATGACAGCTGATACTGAAAACTCATTGGAGAATTTGGGATTTTCGCTGTTTATAGCTATATATGGATTGGTTTCTACTTTAAACGAAGATGAGATTGTAAAGCTTCTTGGAAAGATTTCACAGCATAAACGGTCCCTAGAATTATGTCAGACAAATGGTTTTGCAGATAAGATTGCTGGTCTTATTGGGAAACTTATTGAAAAGAAGCAAGTGATTGATGCTGTTAGATCGATTTGTTTGTTCAAGTTAATTGACAAGTTTCCCCCAGTACCGTTGTTAAAAGCATATGTGCAGGATGCAAAGGAGTGGTCTGAATTAGTTTGCAGCTTAAAGATATCAGATGCTGAAAAGGAGAAGGCTGTAAATAGAAAAATAGCTGATCTTAGAGCTGTCATTCAATGCATCAAAGATTGCAACCTTGAGTCTGAATACCCGTCCATGACTGTTGAAGTGCAAATAGATCAGCTGCAAATACTCGAGGAGAATTGGAGACCATCTTGTGTCTCCAAAGTTAGACAACAAGAGAGAAAAAGGAAGAGACCTAATATCAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida TEX13

Protein Analysis

561

Amino Acids

62.81

Weight (kDa)

8.57

Isoelectric Point (pI)

49.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 101 - 266 2.4e-31 Frigida-like protein
Frigida PF07899 298 - 534 6.4e-52 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 66
AccB1I GGYRCC 1 cut(s) 799
AccII CGCG 2 cut(s) 189, 336
AciI CCGC 3 cut(s) 383, 563, 670
AclWI GGATC 1 cut(s) 315
AcsI RAATTY 2 cut(s) 1048, 1162
AcuI CTGAAG 1 cut(s) 707
AcyI GRCGYC 1 cut(s) 63
AfaI GTAC 2 cut(s) 12, 1401
AfiI CCNNNNNNNGG 4 cut(s) 190, 397, 425, 987
AflII CTTAAG 1 cut(s) 923
AflIII ACRYGT 1 cut(s) 909
AjuI GAANNNNNNNTTGG 2 cut(s) 896, 928
AloI GAACNNNNNNTCC 2 cut(s) 420, 452
Alw21I GWGCWC 3 cut(s) 143, 267, 577
Alw26I GTCTC 3 cut(s) 1615, 1639, 1663
AlwI GGATC 1 cut(s) 315
AlwNI CAGNNNCTG 1 cut(s) 1475
Ama87I CYCGRG 2 cut(s) 288, 1607
AoxI GGCC 1 cut(s) 654
ApeKI GCWGC 8 cut(s) 47, 605, 680, 748, 869, 1112, 1455, 1597
ApoI RAATTY 2 cut(s) 1048, 1162
ArsI GACNNNNNNTTYG 4 cut(s) 769, 801, 1424, 1456
Asp700I GAANNNNTTC 2 cut(s) 278, 1246
AspLEI GCGC 1 cut(s) 189
AspS9I GGNCC 3 cut(s) 807, 1079, 1263
AsuC2I CCSGG 3 cut(s) 391, 426, 804
AsuHPI GGTGA 2 cut(s) 592, 1010
AsuII TTCGAA 1 cut(s) 467
AvaI CYCGRG 2 cut(s) 288, 1607
AvaII GGWCC 3 cut(s) 807, 1079, 1263
BaeGI GKGCMC 1 cut(s) 802
BanI GGYRCC 1 cut(s) 799
BanII GRGCYC 1 cut(s) 267
BbsI GAAGAC 2 cut(s) 238, 493
Bbv12I GWGCWC 3 cut(s) 143, 267, 577
BbvCI CCTCAGC 2 cut(s) 714, 1066
BbvI GCAGC 8 cut(s) 59, 617, 667, 760, 881, 1124, 1467, 1584
BccI CCATC 7 cut(s) 28, 102, 427, 476, 689, 1088, 1633
BclI TGATCA 1 cut(s) 112
BcnI CCSGG 3 cut(s) 391, 426, 804
BcoDI GTCTC 3 cut(s) 1615, 1639, 1663
BfaI CTAG 5 cut(s) 152, 762, 861, 1109, 1268
BfrI CTTAAG 1 cut(s) 923
BglII AGATCT 1 cut(s) 971
Bme1390I CCNGG 3 cut(s) 391, 426, 804
Bme18I GGWCC 3 cut(s) 807, 1079, 1263
BmeT110I CYCGRG 2 cut(s) 288, 1607
BmgT120I GGNCC 3 cut(s) 807, 1079, 1263
BmiI GGNNCC 5 cut(s) 388, 801, 808, 1063, 1265
BmrFI CCNGG 3 cut(s) 391, 426, 804
BmrI ACTGGG 2 cut(s) 1111, 1391
BmsI GCATC 7 cut(s) 157, 422, 700, 1339, 1417, 1462, 1542
BmuI ACTGGG 2 cut(s) 1111, 1391
BpiI GAAGAC 2 cut(s) 238, 493
BpmI CTGGAG 1 cut(s) 402
Bpu10I CCTNAGC 3 cut(s) 266, 714, 1066
Bpu14I TTCGAA 1 cut(s) 467
BpuEI CTTGAG 1 cut(s) 1571
BpuMI CCSGG 3 cut(s) 391, 426, 804
Bsa29I ATCGAT 1 cut(s) 1361
BsaHI GRCGYC 1 cut(s) 63
BsaI GGTCTC 2 cut(s) 1615, 1663
BsaJI CCNNGG 4 cut(s) 54, 424, 657, 803
BsaWI WCCGGW 1 cut(s) 577
Bsc4I CCNNNNNNNGG 4 cut(s) 190, 397, 425, 987
Bse1I ACTGG 3 cut(s) 992, 1117, 1397
Bse3DI GCAATG 2 cut(s) 69, 675
BseCI ATCGAT 1 cut(s) 1361
BseDI CCNNGG 4 cut(s) 54, 424, 657, 803
BseGI GGATG 5 cut(s) 141, 399, 487, 700, 1432
BseLI CCNNNNNNNGG 4 cut(s) 190, 397, 425, 987
BseMI GCAATG 2 cut(s) 69, 675
BseMII CTCAG 4 cut(s) 280, 600, 705, 1080
BseNI ACTGG 3 cut(s) 992, 1117, 1397
BseRI GAGGAG 5 cut(s) 179, 317, 602, 731, 1625
BseSI GKGCMC 1 cut(s) 802
BseXI GCAGC 8 cut(s) 59, 617, 667, 760, 881, 1124, 1467, 1584
BseYI CCCAGC 1 cut(s) 130
BsgI GTGCAG 1 cut(s) 1442
Bsh1236I CGCG 2 cut(s) 189, 336
Bsh1285I CGRYCG 1 cut(s) 54
BshFI GGCC 1 cut(s) 656
BshNI GGYRCC 1 cut(s) 799
BshVI ATCGAT 1 cut(s) 1361
BsiEI CGRYCG 1 cut(s) 54
BsiHKAI GWGCWC 3 cut(s) 143, 267, 577
BsiHKCI CYCGRG 2 cut(s) 288, 1607
BsiSI CCGG 5 cut(s) 391, 426, 578, 752, 803
BslFI GGGAC 3 cut(s) 820, 855, 1249
BslI CCNNNNNNNGG 4 cut(s) 190, 397, 425, 987
BsmAI GTCTC 3 cut(s) 1615, 1639, 1663
BsmFI GGGAC 3 cut(s) 820, 855, 1249
BsnI GGCC 1 cut(s) 656
Bso31I GGTCTC 2 cut(s) 1615, 1663
BsoBI CYCGRG 2 cut(s) 288, 1607
Bsp119I TTCGAA 1 cut(s) 467
Bsp1286I GDGCHC 4 cut(s) 143, 267, 577, 802
Bsp143I GATC 7 cut(s) 112, 307, 834, 971, 1358, 1510, 1591
Bsp68I TCGCGA 1 cut(s) 336
BspACI CCGC 3 cut(s) 383, 563, 670
BspANI GGCC 1 cut(s) 656
BspCNI CTCAG 4 cut(s) 279, 601, 706, 1079
BspDI ATCGAT 1 cut(s) 1361
BspFNI CGCG 2 cut(s) 189, 336
BspHI TCATGA 1 cut(s) 318
BspLI GGNNCC 5 cut(s) 388, 801, 808, 1063, 1265
BspPI GGATC 1 cut(s) 315
BspQI GCTCTTC 1 cut(s) 255
BspT104I TTCGAA 1 cut(s) 467
BspT107I GGYRCC 1 cut(s) 799
BspTI CTTAAG 1 cut(s) 923
BspTNI GGTCTC 2 cut(s) 1615, 1663
BsrDI GCAATG 2 cut(s) 69, 675
BsrI ACTGG 3 cut(s) 992, 1117, 1397
BssECI CCNNGG 4 cut(s) 54, 424, 657, 803
BssMI GATC 7 cut(s) 112, 307, 834, 971, 1358, 1510, 1591
BssNI GRCGYC 1 cut(s) 63
BssT1I CCWWGG 1 cut(s) 657
Bst4CI ACNGT 6 cut(s) 15, 85, 332, 1263, 1404, 1576
Bst6I CTCTTC 3 cut(s) 255, 545, 1661
BstACI GRCGYC 1 cut(s) 63
BstAFI CTTAAG 1 cut(s) 923
BstBI TTCGAA 1 cut(s) 467
BstC8I GCNNGC 1 cut(s) 185
BstDEI CTNAG 6 cut(s) 266, 609, 714, 770, 1066, 1514
BstENI CCTNNNNNAGG 1 cut(s) 188
BstF5I GGATG 5 cut(s) 141, 399, 487, 700, 1432
BstFNI CGCG 2 cut(s) 189, 336
BstHHI GCGC 1 cut(s) 189
BstKTI GATC 7 cut(s) 115, 310, 837, 974, 1361, 1513, 1594
BstMAI GTCTC 3 cut(s) 1615, 1639, 1663
BstMBI GATC 7 cut(s) 112, 307, 834, 971, 1358, 1510, 1591
BstMCI CGRYCG 1 cut(s) 54
BstMWI GCNNNNNNNGC 3 cut(s) 56, 670, 866
BstNSI RCATGY 1 cut(s) 913
BstSCI CCNGG 3 cut(s) 389, 424, 802
BstSLI GKGCMC 1 cut(s) 802
BstUI CGCG 2 cut(s) 189, 336
BstV1I GCAGC 8 cut(s) 59, 617, 667, 760, 881, 1124, 1467, 1584
BstV2I GAAGAC 2 cut(s) 238, 493
BstX2I RGATCY 1 cut(s) 971
BstXI CCANNNNNNTGG 1 cut(s) 1018
BstYI RGATCY 1 cut(s) 971
Bsu15I ATCGAT 1 cut(s) 1361
BsuRI GGCC 1 cut(s) 656
BsuTUI ATCGAT 1 cut(s) 1361
BtgZI GCGATG 1 cut(s) 47
BtsCI GGATG 5 cut(s) 141, 399, 487, 700, 1432
BtsI GCAGTG 1 cut(s) 643
BtsIMutI CAGTG 2 cut(s) 643, 1124
BtuMI TCGCGA 1 cut(s) 336
Cac8I GCNNGC 1 cut(s) 185
CaiI CAGNNNCTG 1 cut(s) 1475
CciI TCATGA 1 cut(s) 318
CfoI GCGC 1 cut(s) 189
Cfr13I GGNCC 3 cut(s) 807, 1079, 1263
ClaI ATCGAT 1 cut(s) 1361
Csp6I GTAC 2 cut(s) 11, 1400
CviAII CATG 5 cut(s) 319, 325, 910, 1073, 1570
CviQI GTAC 2 cut(s) 11, 1400
DdeI CTNAG 6 cut(s) 266, 609, 714, 770, 1066, 1514
DpnI GATC 7 cut(s) 114, 309, 836, 973, 1360, 1512, 1593
DpnII GATC 7 cut(s) 112, 307, 834, 971, 1358, 1510, 1591
DraI TTTAAA 1 cut(s) 1212
Eam1104I CTCTTC 3 cut(s) 255, 545, 1661
EarI CTCTTC 3 cut(s) 255, 545, 1661
Ecl136II GAGCTC 1 cut(s) 265
Eco130I CCWWGG 1 cut(s) 657
Eco24I GRGCYC 1 cut(s) 267
Eco31I GGTCTC 2 cut(s) 1615, 1663
Eco32I GATATC 1 cut(s) 1467
Eco47I GGWCC 3 cut(s) 807, 1079, 1263
Eco53kI GAGCTC 1 cut(s) 265
Eco57I CTGAAG 1 cut(s) 707
Eco88I CYCGRG 2 cut(s) 288, 1607
EcoICRI GAGCTC 1 cut(s) 265
EcoNI CCTNNNNNAGG 1 cut(s) 188
EcoRV GATATC 1 cut(s) 1467
EcoT14I CCWWGG 1 cut(s) 657
EcoT22I ATGCAT 1 cut(s) 1535
EcoT38I GRGCYC 1 cut(s) 267
ErhI CCWWGG 1 cut(s) 657
FaeI CATG 5 cut(s) 322, 328, 913, 1076, 1573
FaqI GGGAC 3 cut(s) 820, 855, 1249
FatI CATG 5 cut(s) 318, 324, 909, 1072, 1569
FauI CCCGC 1 cut(s) 376
FauNDI CATATG 1 cut(s) 1417
FbaI TGATCA 1 cut(s) 112
FokI GGATG 5 cut(s) 148, 406, 494, 707, 1439
FriOI GRGCYC 1 cut(s) 267
FspBI CTAG 5 cut(s) 152, 762, 861, 1109, 1268
GlaI GCGC 1 cut(s) 188
GsaI CCCAGC 1 cut(s) 134
GsuI CTGGAG 1 cut(s) 402
HaeIII GGCC 1 cut(s) 656
HapII CCGG 5 cut(s) 391, 426, 578, 752, 803
HhaI GCGC 1 cut(s) 189
Hin1I GRCGYC 1 cut(s) 63
Hin1II CATG 5 cut(s) 322, 328, 913, 1076, 1573
Hin6I GCGC 1 cut(s) 187
HinP1I GCGC 1 cut(s) 187
HindIII AAGCTT 1 cut(s) 1232
HinfI GANTC 9 cut(s) 234, 291, 469, 727, 778, 848, 874, 889, 1553
HpaII CCGG 5 cut(s) 391, 426, 578, 752, 803
HphI GGTGA 2 cut(s) 592, 1010
Hpy166II GTNNAC 1 cut(s) 767
Hpy188III TCNNGA 6 cut(s) 295, 319, 335, 352, 419, 440
Hpy8I GTNNAC 1 cut(s) 767
Hpy99I CGWCG 1 cut(s) 68
HpyAV CCTTC 5 cut(s) 437, 474, 622, 768, 1480
HpyCH4III ACNGT 6 cut(s) 15, 85, 332, 1263, 1404, 1576
HpyCH4IV ACGT 1 cut(s) 63
HpyF10VI GCNNNNNNNGC 3 cut(s) 56, 670, 866
HpyF3I CTNAG 6 cut(s) 266, 609, 714, 770, 1066, 1514
HpySE526I ACGT 1 cut(s) 63
Hsp92I GRCGYC 1 cut(s) 63
Hsp92II CATG 5 cut(s) 322, 328, 913, 1076, 1573
HspAI GCGC 1 cut(s) 187
Ksp22I TGATCA 1 cut(s) 112
Kzo9I GATC 7 cut(s) 112, 307, 834, 971, 1358, 1510, 1591
LguI GCTCTTC 1 cut(s) 255
LmnI GCTCC 6 cut(s) 145, 580, 718, 745, 1013, 1061
Lsp1109I GCAGC 8 cut(s) 59, 617, 667, 760, 881, 1124, 1467, 1584
LweI GCATC 7 cut(s) 157, 422, 700, 1339, 1417, 1462, 1542
MaeI CTAG 5 cut(s) 152, 762, 861, 1109, 1268
MaeII ACGT 1 cut(s) 63
MaeIII GTNAC 1 cut(s) 1031
MalI GATC 7 cut(s) 114, 309, 836, 973, 1360, 1512, 1593
MboI GATC 7 cut(s) 112, 307, 834, 971, 1358, 1510, 1591
MflI RGATCY 1 cut(s) 971
MhlI GDGCHC 4 cut(s) 143, 267, 577, 802
MlyI GAGTC 6 cut(s) 228, 300, 736, 772, 868, 1562
MmeI TCCRAC 2 cut(s) 195, 1057
Mph1103I ATGCAT 1 cut(s) 1535
MroXI GAANNNNTTC 2 cut(s) 278, 1246
MseI TTAA 7 cut(s) 831, 924, 977, 1211, 1379, 1409, 1460
MslI CAYNNNNRTG 1 cut(s) 323
MspA1I CMGCKG 3 cut(s) 608, 1139, 1597
MspCI CTTAAG 1 cut(s) 923
MspI CCGG 5 cut(s) 391, 426, 578, 752, 803
MspR9I CCNGG 3 cut(s) 391, 426, 804
MvnI CGCG 2 cut(s) 189, 336
MwoI GCNNNNNNNGC 3 cut(s) 56, 670, 866
NciI CCSGG 3 cut(s) 391, 426, 804
NdeI CATATG 1 cut(s) 1417
NdeII GATC 7 cut(s) 112, 307, 834, 971, 1358, 1510, 1591
NlaIII CATG 5 cut(s) 322, 328, 913, 1076, 1573
NlaIV GGNNCC 5 cut(s) 388, 801, 808, 1063, 1265
NruI TCGCGA 1 cut(s) 336
NsiI ATGCAT 1 cut(s) 1535
NspI RCATGY 1 cut(s) 913
NspV TTCGAA 1 cut(s) 467
PaeR7I CTCGAG 2 cut(s) 288, 1607
PagI TCATGA 1 cut(s) 318
PciI ACATGT 1 cut(s) 909
PciSI GCTCTTC 1 cut(s) 255
PcsI WCGNNNNNNNCGW 1 cut(s) 51
PdmI GAANNNNTTC 2 cut(s) 278, 1246
PfeI GAWTC 3 cut(s) 469, 848, 889
PleI GAGTC 6 cut(s) 228, 299, 735, 772, 868, 1561
PpsI GAGTC 6 cut(s) 228, 299, 735, 772, 868, 1561
PscI ACATGT 1 cut(s) 909
Psp124BI GAGCTC 1 cut(s) 267
PspFI CCCAGC 1 cut(s) 130
PspN4I GGNNCC 5 cut(s) 388, 801, 808, 1063, 1265
PspPI GGNCC 3 cut(s) 807, 1079, 1263
PspXI VCTCGAGB 2 cut(s) 288, 1607
PstNI CAGNNNCTG 1 cut(s) 1475
PsuI RGATCY 1 cut(s) 971
PvuII CAGCTG 3 cut(s) 608, 1139, 1597
RruI TCGCGA 1 cut(s) 336
RsaI GTAC 2 cut(s) 12, 1401
RsaNI GTAC 2 cut(s) 11, 1400
RseI CAYNNNNRTG 1 cut(s) 323
SacI GAGCTC 1 cut(s) 267
SapI GCTCTTC 1 cut(s) 255
SaqAI TTAA 7 cut(s) 831, 924, 977, 1211, 1379, 1409, 1460
Sau3AI GATC 7 cut(s) 112, 307, 834, 971, 1358, 1510, 1591
Sau96I GGNCC 3 cut(s) 807, 1079, 1263
SchI GAGTC 6 cut(s) 228, 300, 736, 772, 868, 1562
ScrFI CCNGG 3 cut(s) 391, 426, 804
SduI GDGCHC 4 cut(s) 143, 267, 577, 802
SfaNI GCATC 7 cut(s) 157, 422, 700, 1339, 1417, 1462, 1542
Sfr274I CTCGAG 2 cut(s) 288, 1607
SfuI TTCGAA 1 cut(s) 467
SinI GGWCC 3 cut(s) 807, 1079, 1263
SlaI CTCGAG 2 cut(s) 288, 1607
SmiMI CAYNNNNRTG 1 cut(s) 323
SmlI CTYRAG 4 cut(s) 288, 923, 1550, 1607
SmoI CTYRAG 4 cut(s) 288, 923, 1550, 1607
SsiI CCGC 3 cut(s) 383, 563, 670
SspMI CTAG 5 cut(s) 152, 762, 861, 1109, 1268
SstI GAGCTC 1 cut(s) 267
StyD4I CCNGG 3 cut(s) 389, 424, 802
StyI CCWWGG 1 cut(s) 657
TaaI ACNGT 6 cut(s) 15, 85, 332, 1263, 1404, 1576
TaiI ACGT 1 cut(s) 66
TaqI TCGA 8 cut(s) 39, 158, 282, 289, 467, 837, 1361, 1608
TaqII GACCGA 1 cut(s) 68
TauI GCSGC 2 cut(s) 565, 673
TfiI GAWTC 3 cut(s) 469, 848, 889
Tru1I TTAA 7 cut(s) 831, 924, 977, 1211, 1379, 1409, 1460
Tru9I TTAA 7 cut(s) 831, 924, 977, 1211, 1379, 1409, 1460
TscAI CASTG 2 cut(s) 643, 1124
TseI GCWGC 8 cut(s) 47, 605, 680, 748, 869, 1112, 1455, 1597
TspDTI ATGAA 2 cut(s) 335, 641
TspGWI ACGGA 2 cut(s) 158, 314
TspRI CASTG 2 cut(s) 643, 1124
Vha464I CTTAAG 1 cut(s) 923
VpaK11BI GGWCC 3 cut(s) 807, 1079, 1263
XagI CCTNNNNNAGG 1 cut(s) 188
XapI RAATTY 2 cut(s) 1048, 1162
XceI RCATGY 1 cut(s) 913
XhoI CTCGAG 2 cut(s) 288, 1607
XmnI GAANNNNTTC 2 cut(s) 278, 1246
XspI CTAG 5 cut(s) 152, 762, 861, 1109, 1268
ZraI GACGTC 1 cut(s) 64
Zsp2I ATGCAT 1 cut(s) 1535
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.