Rmu_sc0000076.1_g000037

FRIGIDA-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000076.1
OG0000126
Physical Location & Seq
Reverse (-)
175457 .. 179237
3781 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000076.1_g000037.1.cds

Sequence Viewer

Length: 2406 bp
atggaattggaagagaagagcaagaaagagtgtggtttggaccagaactcgattgagcaatgtgagaaagagatggagttgaagagaggggagcttgattcgaatcggaaatcgatggctgaatgttttgatacagttgaattgagagagggaaagatgagggaaatgtgtggaggttttagtttgcttaagaagtcgatggaggagtggtgctgtaaggttgaattgaaagagagggagattgaggagtgtgttgccaagcttgaattgaaggagaaacaagttgaatcgagatttgaggagcttaatgtgattgataagagggttaatgagtgccttggtgatgctcagttgaaagaaaagcagttggattctgttatgaaattaatacaagaagacaaacagcatttggattggctccaaaagtcggtggaagagcatgaaaaaaagttgggtttggtatcaaatggacttcaaggaaaggcgagggaacttgaagtgcaacaacaacaaattgattcagtctaccatgtgttacagatgaaagagaatgaacttgaacagcaggcccaagagcttgatttgaaacgccagcaatatgagtcactttgccatctgtttcagatcaaagagggtcaacttgaaaagcaatccaacgatcttgaattgaaacacaaacaaattgaatccatccaccatctgattcgaattaaagagtcgcaacttgaaaatcgagccaaggagcttggattcaaacagcaacaaaatgattcaatctctcaactacttgagatgaaagaaagggaacttgaacagcaggaaaaagagcttgaacccaaacaacagcaaattgtttcagtttcgcagacacttcagatgaaagagaggaaacttgaacaacaggcaaaagagcttgacttgaagcaaaaacaatatgattctcaggtgaagatggtccagttgatacatgcacctgctgctaacaatgccactattccttcatctgcaactgatgaatccaggtccagcatcaatatagatggtcgaggcttgcagttttttatgtatgaacaattgaagaaaattgattcaatgcgtgcccaaatgtcggctgcttttcaagtgtcatcagaccctggaaatttggttttggatgcaatgcaaggattttacccttcaaattcaaatatgttgaagagggagactgattttgatctgagctttattagaagaagttgtattcttctgttacaggagttaaagaggatgtcaccacaacttaatcctggggtaagagaaaaagcattgaagttggcagctcattggaaggccaagttgacagtggccactgataattcgttggaggttttgggatttttgcggcttgtaactgcgtttgaattaacctctgcttatgatgccaatgagcttcagagtcttctttctgtagttactcagcccgaacaagcagctcaattaagaaaggctctcggtgtcaaagataaggaaccttcaacctttccctcaaatattcaaccaaatgtcactaaggatgcagggaatgtgtcggggtttggaaataagcctttaagtgggaatcattctatactggctgcttctgttccattgtcatcagacccagctaaactcgtgttggatagcatccaaaaatctcttgctgaatacttgcgaaatggagattgtgaagaaagtatcatgtcaagtaacattagcctattggaggagctaatgagagtttcaccaaatgttggacctaatctgaaagcagaagcaacaaatctatcagtccagtggaaagcaaagatggcaggaaatactgagaagtcattggagggtgtaggatttttgctatttttagctacatatggattgctttctacgttaaatgctgatgagattgtaaagcatcttgggttgatttgtcaccataaacaggctctagaattatgccaggcacgtggttttgcagataagattggtgaatttattcggatccttgttgaaaagaagcaacttattgaggctgttagatttattttcgcgttcaagttaactgacacgctttccccagtccaacttttaaaagaatatttggaggatacaaaaaagtgttctgaagcaattttcatgttgcagatatcacaagatgaaaaggagaaggtggcagatggtctgttaggtgatctaagagctgtgcagcaatacattaaggattacaatcttgagtccaaatacccatctgcagacattgaaatgcaaatagttaagctggaaacagtaaagtcttcccctgcctccaatgtcgaacagcaagagcagagaaaaaggaagaaacctagtgctggcacttcgacccttgagatccaaccaccacaacaggcctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida

Protein Analysis

801

Amino Acids

91.04

Weight (kDa)

5.56

Isoelectric Point (pI)

53.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 982
Acc36I ACCTGC 1 cut(s) 982
AccB7I CCANNNNNTGG 1 cut(s) 1769
AccI GTMKAC 1 cut(s) 525
AccII CGCG 1 cut(s) 2063
AciI CCGC 1 cut(s) 1381
AclWI GGATC 3 cut(s) 2008, 2021, 2377
AcoI YGGCCR 1 cut(s) 1344
AcsI RAATTY 3 cut(s) 1141, 1180, 2003
AcuI CTGAAG 3 cut(s) 857, 1415, 2157
AcvI CACGTG 1 cut(s) 1979
AfiI CCNNNNNNNGG 7 cut(s) 427, 1108, 1592, 1741, 1769, 1954, 2363
AflII CTTAAG 1 cut(s) 188
AjnI CCWGG 4 cut(s) 1019, 1135, 1285, 1971
Alw26I GTCTC 1 cut(s) 1196
AlwI GGATC 3 cut(s) 2008, 2021, 2377
AlwNI CAGNNNCTG 1 cut(s) 1136
AoxI GGCC 4 cut(s) 567, 1329, 1344, 2400
ApeKI GCWGC 6 cut(s) 977, 1112, 1316, 1469, 1613, 2218
ApoI RAATTY 3 cut(s) 1141, 1180, 2003
AseI ATTAAT 1 cut(s) 386
Asp700I GAANNNNTTC 1 cut(s) 2007
AspS9I GGNCC 5 cut(s) 40, 568, 955, 1023, 1772
AsuHPI GGTGA 7 cut(s) 353, 958, 1263, 1752, 1937, 2012, 2213
AsuII TTCGAA 2 cut(s) 101, 706
AvaII GGWCC 4 cut(s) 40, 955, 1023, 1772
BaeGI GKGCMC 1 cut(s) 1102
BalI TGGCCA 1 cut(s) 1346
BamHI GGATCC 1 cut(s) 2013
BauI CACGAG 1 cut(s) 1649
BbrPI CACGTG 1 cut(s) 1979
BbsI GAAGAC 3 cut(s) 402, 1430, 2298
BbvI GCAGC 6 cut(s) 964, 1099, 1328, 1481, 1600, 2230
BciT130I CCWGG 4 cut(s) 1021, 1137, 1287, 1973
BciVI GTATCC 1 cut(s) 2113
BcoDI GTCTC 1 cut(s) 1196
BfaI CTAG 2 cut(s) 1961, 2358
BfmI CTRYAG 2 cut(s) 1446, 2262
BfrI CTTAAG 1 cut(s) 188
BfuAI ACCTGC 1 cut(s) 982
BfuI GTATCC 1 cut(s) 2113
BisI GCNGC 7 cut(s) 978, 1113, 1317, 1382, 1470, 1614, 2219
BlsI GCNGC 7 cut(s) 979, 1114, 1318, 1383, 1471, 1615, 2220
Bme1390I CCNGG 4 cut(s) 1021, 1137, 1287, 1973
Bme18I GGWCC 4 cut(s) 40, 955, 1023, 1772
BmgT120I GGNCC 5 cut(s) 40, 568, 955, 1023, 1772
BmiI GGNNCC 3 cut(s) 419, 1509, 2015
BmrFI CCNGG 4 cut(s) 1021, 1137, 1287, 1973
BmrI ACTGGG 1 cut(s) 2084
BmsI GCATC 7 cut(s) 334, 1038, 1144, 1408, 1543, 1671, 1936
BmuI ACTGGG 1 cut(s) 2084
BpiI GAAGAC 3 cut(s) 402, 1430, 2298
Bpu14I TTCGAA 2 cut(s) 101, 706
BpuEI CTTGAG 3 cut(s) 809, 2264, 2399
Bsa29I ATCGAT 1 cut(s) 113
BsaAI YACGTR 1 cut(s) 1979
BsaBI GATNNNNATC 3 cut(s) 102, 1212, 2238
BsaJI CCNNGG 4 cut(s) 337, 738, 1135, 1286
BsaXI ACNNNNNCTCC 2 cut(s) 194, 224
Bsc4I CCNNNNNNNGG 7 cut(s) 427, 1108, 1592, 1741, 1769, 1954, 2363
Bse1I ACTGG 4 cut(s) 958, 1614, 1810, 2090
Bse3DI GCAATG 2 cut(s) 65, 1164
Bse8I GATNNNNATC 3 cut(s) 102, 1212, 2238
BseBI CCWGG 4 cut(s) 1021, 1137, 1287, 1973
BseCI ATCGAT 1 cut(s) 113
BseDI CCNNGG 4 cut(s) 337, 738, 1135, 1286
BseGI GGATG 5 cut(s) 690, 1159, 1272, 1558, 1662
BseJI GATNNNNATC 3 cut(s) 102, 1212, 2238
BseLI CCNNNNNNNGG 7 cut(s) 427, 1108, 1592, 1741, 1769, 1954, 2363
BseMI GCAATG 2 cut(s) 65, 1164
BseMII CTCAG 5 cut(s) 362, 956, 1208, 1469, 1830
BseNI ACTGG 4 cut(s) 958, 1614, 1810, 2090
BseRI GAGGAG 4 cut(s) 218, 260, 314, 1757
BseSI GKGCMC 1 cut(s) 1102
BseXI GCAGC 6 cut(s) 964, 1099, 1328, 1481, 1600, 2230
BseYI CCCAGC 1 cut(s) 1639
BsgI GTGCAG 1 cut(s) 2237
Bsh1236I CGCG 1 cut(s) 2063
BshFI GGCC 4 cut(s) 569, 1331, 1346, 2402
BshVI ATCGAT 1 cut(s) 113
BslI CCNNNNNNNGG 7 cut(s) 427, 1108, 1592, 1741, 1769, 1954, 2363
BsmAI GTCTC 1 cut(s) 1196
BsnI GGCC 4 cut(s) 569, 1331, 1346, 2402
Bsp119I TTCGAA 2 cut(s) 101, 706
Bsp1286I GDGCHC 1 cut(s) 1102
Bsp143I GATC 6 cut(s) 624, 658, 1213, 2013, 2203, 2382
BspACI CCGC 1 cut(s) 1381
BspANI GGCC 4 cut(s) 569, 1331, 1346, 2402
BspCNI CTCAG 5 cut(s) 361, 955, 1209, 1468, 1831
BspDI ATCGAT 1 cut(s) 113
BspFNI CGCG 1 cut(s) 2063
BspLI GGNNCC 3 cut(s) 419, 1509, 2015
BspMAI CTGCAG 1 cut(s) 2266
BspMI ACCTGC 1 cut(s) 982
BspPI GGATC 3 cut(s) 2008, 2021, 2377
BspQI GCTCTTC 2 cut(s) 11, 429
BspT104I TTCGAA 2 cut(s) 101, 706
BspTI CTTAAG 1 cut(s) 188
BsrDI GCAATG 2 cut(s) 65, 1164
BsrI ACTGG 4 cut(s) 958, 1614, 1810, 2090
BssECI CCNNGG 4 cut(s) 337, 738, 1135, 1286
BssMI GATC 6 cut(s) 624, 658, 1213, 2013, 2203, 2382
BssSI CACGAG 1 cut(s) 1649
BssT1I CCWWGG 2 cut(s) 337, 738
Bst2BI CACGAG 1 cut(s) 1649
Bst2UI CCWGG 4 cut(s) 1021, 1137, 1287, 1973
Bst4CI ACNGT 3 cut(s) 136, 1342, 2299
Bst6I CTCTTC 5 cut(s) 6, 11, 77, 429, 1190
BstAFI CTTAAG 1 cut(s) 188
BstAPI GCANNNNNTGC 1 cut(s) 977
BstBAI YACGTR 1 cut(s) 1979
BstBI TTCGAA 2 cut(s) 101, 706
BstC8I GCNNGC 5 cut(s) 567, 593, 1052, 1098, 2365
BstDEI CTNAG 7 cut(s) 348, 942, 1217, 1455, 1548, 1839, 2207
BstENI CCTNNNNNAGG 1 cut(s) 1739
BstF5I GGATG 5 cut(s) 690, 1159, 1272, 1558, 1662
BstFNI CGCG 1 cut(s) 2063
BstKTI GATC 6 cut(s) 627, 661, 1216, 2016, 2206, 2385
BstMAI GTCTC 1 cut(s) 1196
BstMBI GATC 6 cut(s) 624, 658, 1213, 2013, 2203, 2382
BstMWI GCNNNNNNNGC 4 cut(s) 977, 986, 1418, 1826
BstNI CCWGG 4 cut(s) 1021, 1137, 1287, 1973
BstNSI RCATGY 1 cut(s) 971
BstSCI CCNGG 4 cut(s) 1019, 1135, 1285, 1971
BstSFI CTRYAG 2 cut(s) 1446, 2262
BstSLI GKGCMC 1 cut(s) 1102
BstUI CGCG 1 cut(s) 2063
BstV1I GCAGC 6 cut(s) 964, 1099, 1328, 1481, 1600, 2230
BstV2I GAAGAC 3 cut(s) 402, 1430, 2298
BstX2I RGATCY 2 cut(s) 2013, 2382
BstXI CCANNNNNNTGG 1 cut(s) 1979
BstYI RGATCY 2 cut(s) 2013, 2382
Bsu15I ATCGAT 1 cut(s) 113
BsuI GTATCC 1 cut(s) 2113
BsuRI GGCC 4 cut(s) 569, 1331, 1346, 2402
BsuTUI ATCGAT 1 cut(s) 113
BtsCI GGATG 5 cut(s) 690, 1159, 1272, 1558, 1662
BtsIMutI CAGTG 3 cut(s) 1347, 1347, 1817
BveI ACCTGC 1 cut(s) 982
Cac8I GCNNGC 5 cut(s) 567, 593, 1052, 1098, 2365
CaiI CAGNNNCTG 1 cut(s) 1136
Cfr13I GGNCC 5 cut(s) 40, 568, 955, 1023, 1772
ClaI ATCGAT 1 cut(s) 113
CviAII CATG 5 cut(s) 440, 530, 968, 1717, 2149
DdeI CTNAG 7 cut(s) 348, 942, 1217, 1455, 1548, 1839, 2207
DpnI GATC 6 cut(s) 626, 660, 1215, 2015, 2205, 2384
DpnII GATC 6 cut(s) 624, 658, 1213, 2013, 2203, 2382
DraI TTTAAA 1 cut(s) 2103
EaeI YGGCCR 1 cut(s) 1344
Eam1104I CTCTTC 5 cut(s) 6, 11, 77, 429, 1190
EarI CTCTTC 5 cut(s) 6, 11, 77, 429, 1190
Eco130I CCWWGG 2 cut(s) 337, 738
Eco147I AGGCCT 1 cut(s) 2402
Eco32I GATATC 1 cut(s) 2160
Eco47I GGWCC 4 cut(s) 40, 955, 1023, 1772
Eco57I CTGAAG 3 cut(s) 857, 1415, 2157
Eco72I CACGTG 1 cut(s) 1979
EcoNI CCTNNNNNAGG 1 cut(s) 1739
EcoRII CCWGG 4 cut(s) 1019, 1135, 1285, 1971
EcoRV GATATC 1 cut(s) 2160
EcoT14I CCWWGG 2 cut(s) 337, 738
ErhI CCWWGG 2 cut(s) 337, 738
FaeI CATG 5 cut(s) 443, 533, 971, 1720, 2152
FatI CATG 5 cut(s) 439, 529, 967, 1716, 2148
FauNDI CATATG 1 cut(s) 1885
FblI GTMKAC 1 cut(s) 525
Fnu4HI GCNGC 7 cut(s) 978, 1113, 1317, 1382, 1470, 1614, 2219
FokI GGATG 5 cut(s) 677, 1166, 1279, 1565, 1649
Fsp4HI GCNGC 7 cut(s) 978, 1113, 1317, 1382, 1470, 1614, 2219
FspBI CTAG 2 cut(s) 1961, 2358
GluI GCNGC 7 cut(s) 978, 1113, 1317, 1382, 1470, 1614, 2219
GsaI CCCAGC 1 cut(s) 1643
HaeIII GGCC 4 cut(s) 569, 1331, 1346, 2402
Hin1II CATG 5 cut(s) 443, 533, 971, 1720, 2152
HincII GTYRAC 3 cut(s) 638, 1338, 2073
HindII GTYRAC 3 cut(s) 638, 1338, 2073
HindIII AAGCTT 1 cut(s) 260
HpaI GTTAAC 1 cut(s) 2073
HphI GGTGA 7 cut(s) 353, 958, 1263, 1752, 1937, 2012, 2213
Hpy166II GTNNAC 4 cut(s) 526, 638, 1338, 2073
Hpy188III TCNNGA 4 cut(s) 291, 662, 1961, 2243
Hpy8I GTNNAC 4 cut(s) 526, 638, 1338, 2073
HpyAV CCTTC 6 cut(s) 265, 1008, 1185, 1321, 1521, 2173
HpyCH4III ACNGT 3 cut(s) 136, 1342, 2299
HpyCH4IV ACGT 2 cut(s) 1901, 1978
HpyF10VI GCNNNNNNNGC 4 cut(s) 977, 986, 1418, 1826
HpyF3I CTNAG 7 cut(s) 348, 942, 1217, 1455, 1548, 1839, 2207
HpySE526I ACGT 2 cut(s) 1901, 1978
Hsp92II CATG 5 cut(s) 443, 533, 971, 1720, 2152
KspAI GTTAAC 1 cut(s) 2073
Kzo9I GATC 6 cut(s) 624, 658, 1213, 2013, 2203, 2382
LguI GCTCTTC 2 cut(s) 11, 429
LmnI GCTCC 5 cut(s) 91, 301, 423, 742, 1744
Lsp1109I GCAGC 6 cut(s) 964, 1099, 1328, 1481, 1600, 2230
LweI GCATC 7 cut(s) 334, 1038, 1144, 1408, 1543, 1671, 1936
MaeI CTAG 2 cut(s) 1961, 2358
MaeII ACGT 2 cut(s) 1901, 1978
MaeIII GTNAC 9 cut(s) 534, 603, 1248, 1269, 1387, 1450, 1543, 1724, 1943
MalI GATC 6 cut(s) 626, 660, 1215, 2015, 2205, 2384
MboI GATC 6 cut(s) 624, 658, 1213, 2013, 2203, 2382
MfeI CAATTG 1 cut(s) 1073
MflI RGATCY 2 cut(s) 2013, 2382
MhlI GDGCHC 1 cut(s) 1102
MlsI TGGCCA 1 cut(s) 1346
MluNI TGGCCA 1 cut(s) 1346
MlyI GAGTC 4 cut(s) 611, 725, 1444, 2255
MmeI TCCRAC 6 cut(s) 348, 678, 1341, 1635, 1750, 2119
Mox20I TGGCCA 1 cut(s) 1346
MroXI GAANNNNTTC 1 cut(s) 2007
MscI TGGCCA 1 cut(s) 1346
MslI CAYNNNNRTG 1 cut(s) 2273
Msp20I TGGCCA 1 cut(s) 1346
MspCI CTTAAG 1 cut(s) 188
MspR9I CCNGG 4 cut(s) 1021, 1137, 1287, 1973
MunI CAATTG 1 cut(s) 1073
MvaI CCWGG 4 cut(s) 1021, 1137, 1287, 1973
MvnI CGCG 1 cut(s) 2063
MwoI GCNNNNNNNGC 4 cut(s) 977, 986, 1418, 1826
NdeI CATATG 1 cut(s) 1885
NdeII GATC 6 cut(s) 624, 658, 1213, 2013, 2203, 2382
NlaIII CATG 5 cut(s) 443, 533, 971, 1720, 2152
NlaIV GGNNCC 3 cut(s) 419, 1509, 2015
NmuCI GTSAC 4 cut(s) 603, 1269, 1543, 1943
NspI RCATGY 1 cut(s) 971
NspV TTCGAA 2 cut(s) 101, 706
PaqCI CACCTGC 1 cut(s) 982
PceI AGGCCT 1 cut(s) 2402
PciSI GCTCTTC 2 cut(s) 11, 429
PdmI GAANNNNTTC 1 cut(s) 2007
PflMI CCANNNNNTGG 1 cut(s) 1769
PkrI GCNGC 7 cut(s) 979, 1114, 1318, 1383, 1471, 1615, 2220
PleI GAGTC 4 cut(s) 610, 724, 1443, 2254
PmaCI CACGTG 1 cut(s) 1979
PmlI CACGTG 1 cut(s) 1979
PpsI GAGTC 4 cut(s) 610, 724, 1443, 2254
Ppu21I YACGTR 1 cut(s) 1979
PshBI ATTAAT 1 cut(s) 386
Psp6I CCWGG 4 cut(s) 1019, 1135, 1285, 1971
PspCI CACGTG 1 cut(s) 1979
PspFI CCCAGC 1 cut(s) 1639
PspGI CCWGG 4 cut(s) 1019, 1135, 1285, 1971
PspN4I GGNNCC 3 cut(s) 419, 1509, 2015
PspPI GGNCC 5 cut(s) 40, 568, 955, 1023, 1772
PstI CTGCAG 1 cut(s) 2266
PstNI CAGNNNCTG 1 cut(s) 1136
PsuI RGATCY 2 cut(s) 2013, 2382
RseI CAYNNNNRTG 1 cut(s) 2273
SapI GCTCTTC 2 cut(s) 11, 429
SatI GCNGC 7 cut(s) 978, 1113, 1317, 1382, 1470, 1614, 2219
Sau3AI GATC 6 cut(s) 624, 658, 1213, 2013, 2203, 2382
Sau96I GGNCC 5 cut(s) 40, 568, 955, 1023, 1772
SchI GAGTC 4 cut(s) 611, 725, 1444, 2255
ScrFI CCNGG 4 cut(s) 1021, 1137, 1287, 1973
SduI GDGCHC 1 cut(s) 1102
SfaNI GCATC 7 cut(s) 334, 1038, 1144, 1408, 1543, 1671, 1936
SfcI CTRYAG 2 cut(s) 1446, 2262
SfuI TTCGAA 2 cut(s) 101, 706
SinI GGWCC 4 cut(s) 40, 955, 1023, 1772
SmiMI CAYNNNNRTG 1 cut(s) 2273
SmlI CTYRAG 4 cut(s) 188, 788, 2243, 2378
SmoI CTYRAG 4 cut(s) 188, 788, 2243, 2378
SseBI AGGCCT 1 cut(s) 2402
SsiI CCGC 1 cut(s) 1381
SspI AATATT 2 cut(s) 1531, 2111
SspMI CTAG 2 cut(s) 1961, 2358
StuI AGGCCT 1 cut(s) 2402
StyD4I CCNGG 4 cut(s) 1019, 1135, 1285, 1971
StyI CCWWGG 2 cut(s) 337, 738
TaaI ACNGT 3 cut(s) 136, 1342, 2299
TaiI ACGT 2 cut(s) 1904, 1981
TauI GCSGC 1 cut(s) 1384
TscAI CASTG 3 cut(s) 1347, 1354, 1817
TseFI GTSAC 4 cut(s) 603, 1269, 1543, 1943
TseI GCWGC 6 cut(s) 977, 1112, 1316, 1469, 1613, 2218
Tsp45I GTSAC 4 cut(s) 603, 1269, 1543, 1943
TspRI CASTG 3 cut(s) 1347, 1354, 1817
Van91I CCANNNNNTGG 1 cut(s) 1769
Vha464I CTTAAG 1 cut(s) 188
VpaK11BI GGWCC 4 cut(s) 40, 955, 1023, 1772
VspI ATTAAT 1 cut(s) 386
XagI CCTNNNNNAGG 1 cut(s) 1739
XapI RAATTY 3 cut(s) 1141, 1180, 2003
XbaI TCTAGA 1 cut(s) 1960
XceI RCATGY 1 cut(s) 971
XcmI CCANNNNNNNNNTGG 1 cut(s) 1339
XmiI GTMKAC 1 cut(s) 525
XmnI GAANNNNTTC 1 cut(s) 2007
XspI CTAG 2 cut(s) 1961, 2358
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.