Rw3G003740

FRIGIDA-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000126
Physical Location & Seq
Forward (+)
3212672 .. 3216488
3817 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G003740.1

Sequence Viewer

Length: 1866 bp
ATGGAAGAGACGATCTCGGATTTGAAAGAATCGGAGGTGGACCAAATTGCTCTGGCCGAAGCATTCGAGAATTTGCTAGCCCGCTGCAAGCAAATTGGGGATCAGTTCATCTCGACCCGGAGCACAATCTCGACCCGGTTTAAGGAGCTCCAGACCCGCGAGGAGGAAATTGGGCGCCGGGAGAAGCTTCTGGAAGAGAAAGAGTCCGGCTTTAAGTCGAAGGAGGAGGAGTTGGATGCAATTGAGGAGGGCATTACAGAGAAGCTACTGGAGTTTGAAGAAGGTAAGACCCAATTGGAAAGACTTAATTTTTCGATTGATGATAAAGAGAGGAGGGTTTTGGAAGTTGAGGAATTGATTAGGGTAAAAGAGAGGGAGTGTGATTTGATCGAAAATTGTATCGAAAAGGGTACCAATATGATGATTAGGATTGAGGATAGTATTAAAGAAATGGATTTGAAGGTGAAAGGTTTTGACTTTCATAAGAAAGAAATGGAGGATTGGAGCAGTCAGCTTGAATTGAAAGAGAAGGAACTAGAGAGGTTGTTTGAGAAGCTTAGATTGAAAGAGGCGTTATTAGAACCAAATGTTGTAGAGCTTCATGTTCTTGCTAACAGCGTCGAAGAGGTCGAAGAGTGCCTCAATGAAGCTCAAAGGAGGGAGAGGGAAGTTGAATTGAAAGAGAGACGAGTTGAATCAAGAGTTAAGGAAGTAGAGTTGGCTGAGATGAGGGTCAATGAGTGCCTCAATGAAGGTCAGAGGAAAGAGAGGGAAGTTGAATTGAAAGAGAGACGAGTTGAATCAAGAGTTAAGGAAGTTGAGTTGGCTGAGATGAGGGTCAATGAGTGCCTCAATGAAGCTCACAGGAAAGAGAAGGAAGTTGAATCGAAAGTTAAGGAACTTGAGTTGACTGAGATGAGGGTCAAGGAACGCCTCAATAAGGTTGAATTGAAAGAAGAGCATCTTTGTTTAATGGAGAAGTTGATGGAAGAAAACAAAAGACGTTTGGATGTACTCATGAAGACTTCAGAAGAGTTGGAAAAACACTTGGATTCACTCCAAAAGTCGGTGGAAGAGCGCGAAAGGAATTTGGATTTGGTATCTGATGAACTTAAAGGGAAAGAGAGGGAATTTCAACAGCGGGCCGAAGCGCTTGAATTGAACTGGGCGCAATTTGATTCGCCAGGGAAGATTCAGCAGTTGGAATATACACCTGGGGTTGACAATGCGGTTGTTTCTTCATCTGTGACCAACAACATTTCTTCCTTTGTCAAAGCGGACGAACCAGAATCTTCACTGTCTAAAAATGCAGCAAGTTTTCTTTCCTCAAATCTTCAACCAAATGCCACCAGTGATGAAGAATATGTCCCAGGGTTTCTAAATGAGAATTTAAGTGGGAATAATTTCATAGATAATGAATTGGCTGCTTCTCTTCGGTTGTTACAGGACCCAGCTAAACTCGTGTTATATAATATGCAAAAATCCCTTGATCAGTACTTAAGAAATGGATATTTTGAAGAAAGTATAATGTCAGGTAACCTTTCCATATTGAAGGAGCTAATGAGTATTTCACCACATGTTGGACCTCATCTGAAAGTAGATGCAACATATCTAGCAGCCCAGTGGAAAACAAAGATGAGAGGCAATACCGAAAATTCAGTGGAGAGTTTGGCATTCTTGTTGTTTATAACTCTGTATGGATTGGTTTCTATGTTGAATGTAGATGAGATAGTAAAGCTTCTTGGGTTGATTTCTCAGAATAAAAGGGCTCTCGAATTATGTCAGACACATGCTTTTGCAGTTAAGATCGCTGGTAAGTTTCTTGATTATTATCTTTCCTACTGTGTGTCTTGTTACATCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida

Protein Analysis

621

Amino Acids

72.24

Weight (kDa)

4.89

Isoelectric Point (pI)

44.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 458 - 604 3.3e-19 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1688
Acc65I GGTACC 1 cut(s) 410
AccB1I GGYRCC 2 cut(s) 174, 410
AccB7I CCANNNNNTGG 1 cut(s) 1580
AccII CGCG 2 cut(s) 159, 1080
AciI CCGC 5 cut(s) 82, 157, 1141, 1229, 1277
AclWI GGATC 1 cut(s) 108
AcoI YGGCCR 1 cut(s) 54
AcsI RAATTY 5 cut(s) 70, 1087, 1130, 1387, 1654
AcuI CTGAAG 1 cut(s) 1011
AcyI GRCGYC 1 cut(s) 175
AfaI GTAC 3 cut(s) 412, 1014, 1496
AfeI AGCGCT 1 cut(s) 1152
AfiI CCNNNNNNNGG 5 cut(s) 142, 163, 940, 1066, 1580
AflII CTTAAG 1 cut(s) 1498
AflIII ACRYGT 1 cut(s) 1576
AjnI CCWGG 3 cut(s) 1183, 1213, 1369
AjuI GAANNNNNNNTTGG 2 cut(s) 1079, 1111
Alw21I GWGCWC 2 cut(s) 125, 150
Alw26I GTCTC 3 cut(s) 2, 679, 784
AlwI GGATC 1 cut(s) 108
Aor51HI AGCGCT 1 cut(s) 1152
AoxI GGCC 2 cut(s) 54, 1143
ApeKI GCWGC 4 cut(s) 84, 1310, 1424, 1616
ApoI RAATTY 5 cut(s) 70, 1087, 1130, 1387, 1654
Asp700I GAANNNNTTC 1 cut(s) 1403
Asp718I GGTACC 1 cut(s) 410
AspLEI GCGC 4 cut(s) 177, 1080, 1153, 1171
AspS9I GGNCC 4 cut(s) 40, 1143, 1447, 1583
AsuC2I CCSGG 3 cut(s) 118, 136, 179
AsuHPI GGTGA 2 cut(s) 475, 1563
AsuNHI GCTAGC 1 cut(s) 76
AvaII GGWCC 3 cut(s) 40, 1447, 1583
BanI GGYRCC 2 cut(s) 174, 410
BanII GRGCYC 2 cut(s) 150, 1771
BauI CACGAG 1 cut(s) 1460
BbsI GAAGAC 1 cut(s) 1028
Bbv12I GWGCWC 2 cut(s) 125, 150
BbvI GCAGC 4 cut(s) 71, 1322, 1411, 1628
BccI CCATC 1 cut(s) 979
BciT130I CCWGG 3 cut(s) 1185, 1215, 1371
BclI TGATCA 1 cut(s) 1489
BcnI CCSGG 3 cut(s) 118, 136, 179
BcoDI GTCTC 3 cut(s) 2, 679, 784
BfaI CTAG 3 cut(s) 77, 536, 1613
BfoI RGCGCY 2 cut(s) 178, 1154
BfrI CTTAAG 1 cut(s) 1498
BisI GCNGC 4 cut(s) 85, 1311, 1425, 1617
BlsI GCNGC 4 cut(s) 86, 1312, 1426, 1618
BmcAI AGTACT 1 cut(s) 1496
Bme1390I CCNGG 6 cut(s) 118, 136, 179, 1185, 1215, 1371
Bme18I GGWCC 3 cut(s) 40, 1447, 1583
BmgT120I GGNCC 4 cut(s) 40, 1143, 1447, 1583
BmiI GGNNCC 3 cut(s) 176, 412, 1449
BmrFI CCNGG 6 cut(s) 118, 136, 179, 1185, 1215, 1371
BmrI ACTGGG 2 cut(s) 1174, 1615
BmsI GCATC 3 cut(s) 226, 970, 1591
BmtI GCTAGC 1 cut(s) 80
BmuI ACTGGG 2 cut(s) 1174, 1615
BpiI GAAGAC 1 cut(s) 1028
BplI GAGNNNNNCTC 1 cut(s) 31
BpmI CTGGAG 2 cut(s) 134, 290
BpuEI CTTGAG 1 cut(s) 923
BpuMI CCSGG 3 cut(s) 118, 136, 179
BsaBI GATNNNNATC 1 cut(s) 1830
BsaHI GRCGYC 1 cut(s) 175
BsaJI CCNNGG 4 cut(s) 1184, 1214, 1369, 1370
BsaXI ACNNNNNCTCC 2 cut(s) 215, 245
Bsc4I CCNNNNNNNGG 5 cut(s) 142, 163, 940, 1066, 1580
Bse1I ACTGG 4 cut(s) 273, 1169, 1350, 1621
Bse8I GATNNNNATC 1 cut(s) 1830
BseBI CCWGG 3 cut(s) 1185, 1215, 1371
BseDI CCNNGG 4 cut(s) 1184, 1214, 1369, 1370
BseGI GGATG 2 cut(s) 241, 1015
BseJI GATNNNNATC 1 cut(s) 1830
BseLI CCNNNNNNNGG 5 cut(s) 142, 163, 940, 1066, 1580
BseMII CTCAG 4 cut(s) 714, 819, 903, 1769
BseNI ACTGG 4 cut(s) 273, 1169, 1350, 1621
BseRI GAGGAG 5 cut(s) 176, 239, 242, 260, 346
BseXI GCAGC 4 cut(s) 71, 1322, 1411, 1628
BseYI CCCAGC 1 cut(s) 1450
Bsh1236I CGCG 2 cut(s) 159, 1080
BshFI GGCC 2 cut(s) 56, 1145
BshNI GGYRCC 2 cut(s) 174, 410
BsiHKAI GWGCWC 2 cut(s) 125, 150
BsiSI CCGG 4 cut(s) 118, 136, 178, 207
BslFI GGGAC 1 cut(s) 1352
BslI CCNNNNNNNGG 5 cut(s) 142, 163, 940, 1066, 1580
BsmAI GTCTC 3 cut(s) 2, 679, 784
BsmBI CGTCTC 3 cut(s) 2, 679, 784
BsmFI GGGAC 1 cut(s) 1352
BsmI GAATGC 2 cut(s) 62, 1673
BsnI GGCC 2 cut(s) 56, 1145
Bsp1286I GDGCHC 3 cut(s) 125, 150, 1771
Bsp143I GATC 5 cut(s) 12, 100, 387, 1489, 1806
BspACI CCGC 5 cut(s) 82, 157, 1141, 1229, 1277
BspANI GGCC 2 cut(s) 56, 1145
BspCNI CTCAG 4 cut(s) 715, 820, 904, 1768
BspFNI CGCG 2 cut(s) 159, 1080
BspHI TCATGA 1 cut(s) 1017
BspLI GGNNCC 3 cut(s) 176, 412, 1449
BspOI GCTAGC 1 cut(s) 80
BspPI GGATC 1 cut(s) 108
BspQI GCTCTTC 2 cut(s) 951, 1068
BspT107I GGYRCC 2 cut(s) 174, 410
BspTI CTTAAG 1 cut(s) 1498
BsrI ACTGG 4 cut(s) 273, 1169, 1350, 1621
BssECI CCNNGG 4 cut(s) 1184, 1214, 1369, 1370
BssMI GATC 5 cut(s) 12, 100, 387, 1489, 1806
BssNI GRCGYC 1 cut(s) 175
BssSI CACGAG 1 cut(s) 1460
Bst2BI CACGAG 1 cut(s) 1460
Bst2UI CCWGG 3 cut(s) 1185, 1215, 1371
Bst4CI ACNGT 2 cut(s) 1299, 1844
Bst6I CTCTTC 7 cut(s) 189, 618, 627, 951, 1026, 1068, 1437
BstACI GRCGYC 1 cut(s) 175
BstAFI CTTAAG 1 cut(s) 1498
BstC8I GCNNGC 4 cut(s) 78, 82, 89, 1143
BstDEI CTNAG 5 cut(s) 557, 723, 828, 912, 1755
BstEII GGTNACC 1 cut(s) 1535
BstENI CCTNNNNNAGG 1 cut(s) 938
BstF5I GGATG 2 cut(s) 241, 1015
BstFNI CGCG 2 cut(s) 159, 1080
BstH2I RGCGCY 2 cut(s) 178, 1154
BstHHI GCGC 4 cut(s) 177, 1080, 1153, 1171
BstKTI GATC 5 cut(s) 15, 103, 390, 1492, 1809
BstMAI GTCTC 3 cut(s) 2, 679, 784
BstMBI GATC 5 cut(s) 12, 100, 387, 1489, 1806
BstNI CCWGG 3 cut(s) 1185, 1215, 1371
BstNSI RCATGY 2 cut(s) 1580, 1793
BstPI GGTNACC 1 cut(s) 1535
BstSCI CCNGG 6 cut(s) 116, 134, 177, 1183, 1213, 1369
BstUI CGCG 2 cut(s) 159, 1080
BstV1I GCAGC 4 cut(s) 71, 1322, 1411, 1628
BstV2I GAAGAC 1 cut(s) 1028
BsuRI GGCC 2 cut(s) 56, 1145
BtsCI GGATG 2 cut(s) 241, 1015
BtsIMutI CAGTG 4 cut(s) 1295, 1357, 1628, 1665
Cac8I GCNNGC 4 cut(s) 78, 82, 89, 1143
CciI TCATGA 1 cut(s) 1017
CfoI GCGC 4 cut(s) 177, 1080, 1153, 1171
Cfr13I GGNCC 4 cut(s) 40, 1143, 1447, 1583
CseI GACGC 1 cut(s) 607
Csp6I GTAC 3 cut(s) 411, 1013, 1495
CviAII CATG 4 cut(s) 602, 1018, 1577, 1790
CviQI GTAC 3 cut(s) 411, 1013, 1495
DdeI CTNAG 5 cut(s) 557, 723, 828, 912, 1755
DinI GGCGCC 1 cut(s) 176
DpnI GATC 5 cut(s) 14, 102, 389, 1491, 1808
DpnII GATC 5 cut(s) 12, 100, 387, 1489, 1806
EaeI YGGCCR 1 cut(s) 54
Eam1104I CTCTTC 7 cut(s) 189, 618, 627, 951, 1026, 1068, 1437
EarI CTCTTC 7 cut(s) 189, 618, 627, 951, 1026, 1068, 1437
Ecl136II GAGCTC 1 cut(s) 148
Eco24I GRGCYC 2 cut(s) 150, 1771
Eco47I GGWCC 3 cut(s) 40, 1447, 1583
Eco47III AGCGCT 1 cut(s) 1152
Eco53kI GAGCTC 1 cut(s) 148
Eco57I CTGAAG 1 cut(s) 1011
Eco91I GGTNACC 1 cut(s) 1535
EcoICRI GAGCTC 1 cut(s) 148
EcoNI CCTNNNNNAGG 1 cut(s) 938
EcoO109I RGGNCCY 1 cut(s) 1447
EcoO65I GGTNACC 1 cut(s) 1535
EcoRII CCWGG 3 cut(s) 1183, 1213, 1369
EcoT38I GRGCYC 2 cut(s) 150, 1771
EgeI GGCGCC 1 cut(s) 176
EheI GGCGCC 1 cut(s) 176
Esp3I CGTCTC 3 cut(s) 2, 679, 784
FaeI CATG 4 cut(s) 605, 1021, 1580, 1793
FalI AAGNNNNNCTT 2 cut(s) 948, 980
FaqI GGGAC 1 cut(s) 1352
FatI CATG 4 cut(s) 601, 1017, 1576, 1789
FauI CCCGC 3 cut(s) 89, 164, 1134
FbaI TGATCA 1 cut(s) 1489
Fnu4HI GCNGC 4 cut(s) 85, 1311, 1425, 1617
FokI GGATG 2 cut(s) 248, 1022
FriOI GRGCYC 2 cut(s) 150, 1771
Fsp4HI GCNGC 4 cut(s) 85, 1311, 1425, 1617
FspBI CTAG 3 cut(s) 77, 536, 1613
GlaI GCGC 4 cut(s) 176, 1079, 1152, 1170
GluI GCNGC 4 cut(s) 85, 1311, 1425, 1617
GsaI CCCAGC 1 cut(s) 1454
GsuI CTGGAG 2 cut(s) 134, 290
HaeII RGCGCY 2 cut(s) 178, 1154
HaeIII GGCC 2 cut(s) 56, 1145
HapII CCGG 4 cut(s) 118, 136, 178, 207
HgaI GACGC 1 cut(s) 607
HhaI GCGC 4 cut(s) 177, 1080, 1153, 1171
Hin1I GRCGYC 1 cut(s) 175
Hin1II CATG 4 cut(s) 605, 1021, 1580, 1793
Hin6I GCGC 4 cut(s) 175, 1078, 1151, 1169
HinP1I GCGC 4 cut(s) 175, 1078, 1151, 1169
HincII GTYRAC 2 cut(s) 909, 1222
HindII GTYRAC 2 cut(s) 909, 1222
HindIII AAGCTT 3 cut(s) 185, 554, 1736
HinfI GANTC 9 cut(s) 29, 203, 695, 800, 884, 1052, 1178, 1192, 1289
HpaII CCGG 4 cut(s) 118, 136, 178, 207
HphI GGTGA 2 cut(s) 475, 1563
Hpy166II GTNNAC 3 cut(s) 40, 909, 1222
Hpy188I TCNGA 8 cut(s) 19, 34, 759, 1030, 1105, 1593, 1758, 1785
Hpy8I GTNNAC 3 cut(s) 40, 909, 1222
Hpy99I CGWCG 1 cut(s) 623
HpyAV CCTTC 7 cut(s) 214, 275, 454, 523, 746, 868, 1546
HpyCH4III ACNGT 2 cut(s) 1299, 1844
HpyCH4IV ACGT 1 cut(s) 1003
HpyCH4V TGCA 6 cut(s) 87, 239, 1310, 1477, 1604, 1799
HpyF3I CTNAG 5 cut(s) 557, 723, 828, 912, 1755
HpySE526I ACGT 1 cut(s) 1003
Hsp92I GRCGYC 1 cut(s) 175
Hsp92II CATG 4 cut(s) 605, 1021, 1580, 1793
HspAI GCGC 4 cut(s) 175, 1078, 1151, 1169
KasI GGCGCC 1 cut(s) 174
KpnI GGTACC 1 cut(s) 414
Ksp22I TGATCA 1 cut(s) 1489
Kzo9I GATC 5 cut(s) 12, 100, 387, 1489, 1806
LguI GCTCTTC 2 cut(s) 951, 1068
LmnI GCTCC 5 cut(s) 120, 145, 153, 504, 1555
Lsp1109I GCAGC 4 cut(s) 71, 1322, 1411, 1628
LweI GCATC 3 cut(s) 226, 970, 1591
MaeI CTAG 3 cut(s) 77, 536, 1613
MaeII ACGT 1 cut(s) 1003
MaeIII GTNAC 4 cut(s) 1246, 1440, 1535, 1853
MalI GATC 5 cut(s) 14, 102, 389, 1491, 1808
MboI GATC 5 cut(s) 12, 100, 387, 1489, 1806
MfeI CAATTG 2 cut(s) 240, 293
MhlI GDGCHC 3 cut(s) 125, 150, 1771
Mly113I GGCGCC 1 cut(s) 175
MlyI GAGTC 1 cut(s) 212
MmeI TCCRAC 4 cut(s) 213, 1017, 1182, 1561
MroXI GAANNNNTTC 1 cut(s) 1403
MspA1I CMGCKG 2 cut(s) 84, 1141
MspCI CTTAAG 1 cut(s) 1498
MspI CCGG 4 cut(s) 118, 136, 178, 207
MspR9I CCNGG 6 cut(s) 118, 136, 179, 1185, 1215, 1371
MunI CAATTG 2 cut(s) 240, 293
Mva1269I GAATGC 2 cut(s) 62, 1673
MvaI CCWGG 3 cut(s) 1185, 1215, 1371
MvnI CGCG 2 cut(s) 159, 1080
NarI GGCGCC 1 cut(s) 175
NciI CCSGG 3 cut(s) 118, 136, 179
NdeII GATC 5 cut(s) 12, 100, 387, 1489, 1806
NheI GCTAGC 1 cut(s) 76
NlaIII CATG 4 cut(s) 605, 1021, 1580, 1793
NlaIV GGNNCC 3 cut(s) 176, 412, 1449
NmuCI GTSAC 1 cut(s) 1246
NspI RCATGY 2 cut(s) 1580, 1793
PagI TCATGA 1 cut(s) 1017
PasI CCCWGGG 1 cut(s) 1370
PciI ACATGT 1 cut(s) 1576
PciSI GCTCTTC 2 cut(s) 951, 1068
PcsI WCGNNNNNNNCGW 1 cut(s) 627
PctI GAATGC 2 cut(s) 62, 1673
PdmI GAANNNNTTC 1 cut(s) 1403
PfeI GAWTC 8 cut(s) 29, 695, 800, 884, 1052, 1178, 1192, 1289
PflMI CCANNNNNTGG 1 cut(s) 1580
PkrI GCNGC 4 cut(s) 86, 1312, 1426, 1618
PleI GAGTC 1 cut(s) 211
PluTI GGCGCC 1 cut(s) 178
PpsI GAGTC 1 cut(s) 211
PpuMI RGGWCCY 1 cut(s) 1447
PscI ACATGT 1 cut(s) 1576
PsiI TTATAA 1 cut(s) 1688
Psp124BI GAGCTC 1 cut(s) 150
Psp5II RGGWCCY 1 cut(s) 1447
Psp6I CCWGG 3 cut(s) 1183, 1213, 1369
PspEI GGTNACC 1 cut(s) 1535
PspFI CCCAGC 1 cut(s) 1450
PspGI CCWGG 3 cut(s) 1183, 1213, 1369
PspN4I GGNNCC 3 cut(s) 176, 412, 1449
PspPI GGNCC 4 cut(s) 40, 1143, 1447, 1583
PspPPI RGGWCCY 1 cut(s) 1447
RsaI GTAC 3 cut(s) 412, 1014, 1496
RsaNI GTAC 3 cut(s) 411, 1013, 1495
SacI GAGCTC 1 cut(s) 150
SapI GCTCTTC 2 cut(s) 951, 1068
SatI GCNGC 4 cut(s) 85, 1311, 1425, 1617
Sau3AI GATC 5 cut(s) 12, 100, 387, 1489, 1806
Sau96I GGNCC 4 cut(s) 40, 1143, 1447, 1583
ScaI AGTACT 1 cut(s) 1496
SchI GAGTC 1 cut(s) 212
ScrFI CCNGG 6 cut(s) 118, 136, 179, 1185, 1215, 1371
SduI GDGCHC 3 cut(s) 125, 150, 1771
SfaNI GCATC 3 cut(s) 226, 970, 1591
SfoI GGCGCC 1 cut(s) 176
SinI GGWCC 3 cut(s) 40, 1447, 1583
SmlI CTYRAG 2 cut(s) 902, 1498
SmoI CTYRAG 2 cut(s) 902, 1498
SsiI CCGC 5 cut(s) 82, 157, 1141, 1229, 1277
SspDI GGCGCC 1 cut(s) 174
SspMI CTAG 3 cut(s) 77, 536, 1613
SstI GAGCTC 1 cut(s) 150
StyD4I CCNGG 6 cut(s) 116, 134, 177, 1183, 1213, 1369
TaaI ACNGT 2 cut(s) 1299, 1844
TaiI ACGT 1 cut(s) 1006
TatI WGTACW 2 cut(s) 1012, 1494
TfiI GAWTC 8 cut(s) 29, 695, 800, 884, 1052, 1178, 1192, 1289
TscAI CASTG 4 cut(s) 1302, 1357, 1628, 1665
TseFI GTSAC 1 cut(s) 1246
TseI GCWGC 4 cut(s) 84, 1310, 1424, 1616
Tsp45I GTSAC 1 cut(s) 1246
TspRI CASTG 4 cut(s) 1302, 1357, 1628, 1665
Van91I CCANNNNNTGG 1 cut(s) 1580
Vha464I CTTAAG 1 cut(s) 1498
VpaK11BI GGWCC 3 cut(s) 40, 1447, 1583
XagI CCTNNNNNAGG 1 cut(s) 938
XapI RAATTY 5 cut(s) 70, 1087, 1130, 1387, 1654
XceI RCATGY 2 cut(s) 1580, 1793
XmnI GAANNNNTTC 1 cut(s) 1403
XspI CTAG 3 cut(s) 77, 536, 1613
ZrmI AGTACT 1 cut(s) 1496
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.