Rorug02G0645000

Frigida-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000126
Physical Location & Seq
Forward (+)
75544268 .. 75553152
8885 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0645000.1

Sequence Viewer

Length: 1530 bp
ATGTCTCTCTTAATGCTCCAAATACCTCTGTTCACTTCTCTCTTGATCCTGGTTATTGTTTGGAAGAAATCCAAAGTCAGATCAGGCCCTAGGAAGTCTCCACCAGGGCCATGGAAGCTGCCTATTATCGGAAACTTGCATCAGTTGGCTACTGGTAATCCACTACCACATCATGCATTGAGAGACTTGGCCAAGAAACATGGACCTATTATGCACCTAAAACTGGGTCAGGTGGAGGCTACTGTAATTTCTTCCTCCAAAGCTGCAGAAGAGGTCTTGAAGACACATGAGCTCACTTTTGCTCAGAGGCCTTTGGTTTTGGCTGTAGAAGTCATGTCCTTTGCTCAATCAAGCATTGTGTTTTCTCCTTATGGTGATTACTGGAGACAGATGCGCAAGGTTTGTGTTCTCAAACTCTTCAACACTAAACGTGTACAGTCTTTCAGATCTATCAGAGAAGAAGAGGTTTTGAATTTCATCGAATCCATTCATTCTTCATCATCAAAGGGACTTACTCCCATCAACTTCAGTGAGAAGATCTCCAGCTTGACAAATGGGATAGTGTCGAGGGCAGCGCTTGGTCAAAAGTGCAAAGATGAAAAGGAGTTTACTTCATGGCTCGAGGAAGCTACACAACTAGCTGCAGGCTTTGACATACCTGACTTGTTTCCTTCTCTCAGGTTTCTTGGTTATGTTACTGGGACAATACCTAAGATGAAGAAGATGCGAAACAAGCTCGAAAAGATTCTTGAGAGGATCATCAATGATCACAAGATCAAAAATCAAGGCAATGAGGTTAACAAGCCGGAGGAAGATTTTGTTGACGTACTTCTAAAACTTCAGGAGTCCAAGGAGCTTGAAGTAACAACCGATCAGATCAAAGATGTAATTATGGATATATTCTCTGCAGGTAGTGAGACTACAGCTACTACCATCGAATGGGCAATGTCGGAGTTGATGAGAAACCCTAGCGTAATGAACAAGGCCCAAGCTGAGCTGCGAAAACTCCTCGAAGGAAAGCCAAAAATTGAAGAAGTAGACGTTCAAAACCTGGATTACTTAAAAGCAGTTGTGAAAGAAACTCTGAGACTGCACCCTCCAGGCACATTACTACCAAGAGAATCAAGAGAAAGTTGCGAAATCAGCGGATACGCAATCCCAGCCAAAACGAAAGTGCTCATCAACGAGTGGGCAATTGGAAGAGATCCGGAGTGTTGGATTGATGCAGAGTCGTTTAAGCCAGAGAGGTTCATGCATGGTTCTAAATCAAATGTTGACTTTAAAGGTTTCGACTTTGAGTTCATTCCCTTTGGAGCTGGGAGAAGAATATGTCCGGGGATGTCATTTGGAGTTTCAATCATTGAAGTTGCTCTTTCTCAATTGCTCTACCATTTTGATTGGGAGTTGGGGAATGGGATTAAACCAGATGAACTTGACATGTCCGAGGCCTTCGGGATAACATGTAGGAGAAAGCATGACCTGTACGTGATTGCTACTCCTCATCGTTTTCCTGCACTCCATAATGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Frigida

Protein Analysis

509

Amino Acids

57.53

Weight (kDa)

8.52

Isoelectric Point (pI)

43.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 34 - 480 1.1e-97 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 395
Acc36I ACCTGC 1 cut(s) 899
AccB7I CCANNNNNTGG 1 cut(s) 939
AccI GTMKAC 1 cut(s) 1038
AccIII TCCGGA 1 cut(s) 1207
AciI CCGC 1 cut(s) 1146
AclWI GGATC 3 cut(s) 40, 764, 1199
AcoI YGGCCR 1 cut(s) 189
AcsI RAATTY 1 cut(s) 472
AcuI CTGAAG 2 cut(s) 511, 824
AfaI GTAC 3 cut(s) 435, 828, 1484
AfeI AGCGCT 1 cut(s) 576
AfiI CCNNNNNNNGG 3 cut(s) 128, 223, 939
AflIII ACRYGT 3 cut(s) 430, 1437, 1460
AgsI TTSAA 8 cut(s) 280, 421, 472, 860, 1031, 1046, 1356, 1364
AjnI CCWGG 4 cut(s) 48, 103, 1050, 1099
Alw21I GWGCWC 2 cut(s) 294, 1179
Alw26I GTCTC 6 cut(s) 9, 102, 177, 379, 911, 1081
AlwI GGATC 3 cut(s) 40, 764, 1199
Ama87I CYCGRG 1 cut(s) 620
Aor13HI TCCGGA 1 cut(s) 1207
Aor51HI AGCGCT 1 cut(s) 576
AoxI GGCC 6 cut(s) 85, 107, 189, 308, 984, 1446
ApeKI GCWGC 5 cut(s) 118, 263, 572, 641, 997
ApoI RAATTY 1 cut(s) 472
Asp700I GAANNNNTTC 2 cut(s) 486, 744
AspA2I CCTAGG 1 cut(s) 89
AspLEI GCGC 2 cut(s) 396, 577
AspS9I GGNCC 4 cut(s) 86, 107, 203, 985
AsuC2I CCSGG 1 cut(s) 1335
AsuHPI GGTGA 1 cut(s) 386
AvaI CYCGRG 1 cut(s) 620
AvaII GGWCC 1 cut(s) 203
AvrII CCTAGG 1 cut(s) 89
BalI TGGCCA 1 cut(s) 191
BanII GRGCYC 1 cut(s) 294
BbsI GAAGAC 1 cut(s) 287
Bbv12I GWGCWC 2 cut(s) 294, 1179
BbvI GCAGC 5 cut(s) 105, 250, 584, 628, 984
BccI CCATC 2 cut(s) 527, 941
BciT130I CCWGG 4 cut(s) 50, 105, 1052, 1101
BciVI GTATCC 1 cut(s) 1142
BclI TGATCA 1 cut(s) 766
BcnI CCSGG 1 cut(s) 1335
BcoDI GTCTC 6 cut(s) 9, 102, 177, 379, 911, 1081
BfaI CTAG 3 cut(s) 90, 638, 969
BfmI CTRYAG 5 cut(s) 264, 324, 642, 906, 921
BfoI RGCGCY 1 cut(s) 578
BfuAI ACCTGC 1 cut(s) 899
BfuI GTATCC 1 cut(s) 1142
BglII AGATCT 2 cut(s) 446, 537
BisI GCNGC 5 cut(s) 119, 264, 573, 642, 998
BlnI CCTAGG 1 cut(s) 89
BlpI GCTNAGC 1 cut(s) 993
BlsI GCNGC 5 cut(s) 120, 265, 574, 643, 999
Bme1390I CCNGG 5 cut(s) 50, 105, 1052, 1101, 1335
Bme18I GGWCC 1 cut(s) 203
BmeT110I CYCGRG 1 cut(s) 620
BmgT120I GGNCC 4 cut(s) 86, 107, 203, 985
BmrFI CCNGG 5 cut(s) 50, 105, 1052, 1101, 1335
BmrI ACTGGG 2 cut(s) 233, 708
BmsI GCATC 4 cut(s) 148, 381, 714, 1213
BmuI ACTGGG 2 cut(s) 233, 708
BpiI GAAGAC 1 cut(s) 287
BplI GAGNNNNNCTC 2 cut(s) 524, 556
BpmI CTGGAG 3 cut(s) 403, 526, 1083
Bpu1102I GCTNAGC 1 cut(s) 993
BpuEI CTTGAG 1 cut(s) 770
BpuMI CCSGG 1 cut(s) 1335
BsaAI YACGTR 1 cut(s) 1486
BsaJI CCNNGG 6 cut(s) 89, 104, 110, 849, 1334, 1443
BsaWI WCCGGW 1 cut(s) 1207
Bsc4I CCNNNNNNNGG 3 cut(s) 128, 223, 939
Bse1I ACTGG 4 cut(s) 157, 228, 386, 703
Bse3DI GCAATG 2 cut(s) 796, 951
BseAI TCCGGA 1 cut(s) 1207
BseBI CCWGG 4 cut(s) 50, 105, 1052, 1101
BseDI CCNNGG 6 cut(s) 89, 104, 110, 849, 1334, 1443
BseGI GGATG 1 cut(s) 1344
BseLI CCNNNNNNNGG 3 cut(s) 128, 223, 939
BseMI GCAATG 2 cut(s) 796, 951
BseMII CTCAG 4 cut(s) 317, 691, 984, 1076
BseNI ACTGG 4 cut(s) 157, 228, 386, 703
BseRI GAGGAG 2 cut(s) 998, 1488
BseXI GCAGC 5 cut(s) 105, 250, 584, 628, 984
BseYI CCCAGC 2 cut(s) 1159, 1316
BsgI GTGCAG 2 cut(s) 1076, 1497
BshFI GGCC 6 cut(s) 87, 109, 191, 310, 986, 1448
BsiHKAI GWGCWC 2 cut(s) 294, 1179
BsiHKCI CYCGRG 1 cut(s) 620
BsiSI CCGG 3 cut(s) 806, 1208, 1334
BslFI GGGAC 2 cut(s) 522, 715
BslI CCNNNNNNNGG 3 cut(s) 128, 223, 939
BsmAI GTCTC 6 cut(s) 9, 102, 177, 379, 911, 1081
BsmFI GGGAC 2 cut(s) 522, 715
BsnI GGCC 6 cut(s) 87, 109, 191, 310, 986, 1448
BsoBI CYCGRG 1 cut(s) 620
Bsp1286I GDGCHC 2 cut(s) 294, 1179
Bsp13I TCCGGA 1 cut(s) 1207
Bsp1407I TGTACA 1 cut(s) 433
Bsp1720I GCTNAGC 1 cut(s) 993
Bsp19I CCATGG 1 cut(s) 110
BspACI CCGC 1 cut(s) 1146
BspANI GGCC 6 cut(s) 87, 109, 191, 310, 986, 1448
BspCNI CTCAG 4 cut(s) 316, 690, 985, 1077
BspEI TCCGGA 1 cut(s) 1207
BspMAI CTGCAG 3 cut(s) 268, 646, 910
BspMI ACCTGC 1 cut(s) 899
BspPI GGATC 3 cut(s) 40, 764, 1199
BsrDI GCAATG 2 cut(s) 796, 951
BsrGI TGTACA 1 cut(s) 433
BsrI ACTGG 4 cut(s) 157, 228, 386, 703
BssECI CCNNGG 6 cut(s) 89, 104, 110, 849, 1334, 1443
BssT1I CCWWGG 3 cut(s) 89, 110, 849
Bst2UI CCWGG 4 cut(s) 50, 105, 1052, 1101
Bst4CI ACNGT 2 cut(s) 244, 438
Bst6I CTCTTC 4 cut(s) 264, 422, 456, 1195
BstAUI TGTACA 1 cut(s) 433
BstBAI YACGTR 1 cut(s) 1486
BstC8I GCNNGC 1 cut(s) 646
BstDEI CTNAG 5 cut(s) 303, 677, 711, 993, 1085
BstDSI CCRYGG 1 cut(s) 110
BstF5I GGATG 1 cut(s) 1344
BstH2I RGCGCY 1 cut(s) 578
BstHHI GCGC 2 cut(s) 396, 577
BstMAI GTCTC 6 cut(s) 9, 102, 177, 379, 911, 1081
BstMWI GCNNNNNNNGC 4 cut(s) 115, 733, 1143, 1160
BstNI CCWGG 4 cut(s) 50, 105, 1052, 1101
BstNSI RCATGY 2 cut(s) 1441, 1464
BstSCI CCNGG 5 cut(s) 48, 103, 1050, 1099, 1333
BstSFI CTRYAG 5 cut(s) 264, 324, 642, 906, 921
BstV1I GCAGC 5 cut(s) 105, 250, 584, 628, 984
BstV2I GAAGAC 1 cut(s) 287
BstX2I RGATCY 3 cut(s) 446, 537, 1204
BstXI CCANNNNNNTGG 1 cut(s) 111
BstYI RGATCY 3 cut(s) 446, 537, 1204
BsuI GTATCC 1 cut(s) 1142
BsuRI GGCC 6 cut(s) 87, 109, 191, 310, 986, 1448
BtgI CCRYGG 1 cut(s) 110
BtsCI GGATG 1 cut(s) 1344
BtsIMutI CAGTG 1 cut(s) 535
BveI ACCTGC 1 cut(s) 899
Cac8I GCNNGC 1 cut(s) 646
CfoI GCGC 2 cut(s) 396, 577
Cfr13I GGNCC 4 cut(s) 86, 107, 203, 985
Csp6I GTAC 3 cut(s) 434, 827, 1483
CviQI GTAC 3 cut(s) 434, 827, 1483
DdeI CTNAG 5 cut(s) 303, 677, 711, 993, 1085
DraI TTTAAA 1 cut(s) 1282
EaeI YGGCCR 1 cut(s) 189
Eam1104I CTCTTC 4 cut(s) 264, 422, 456, 1195
EarI CTCTTC 4 cut(s) 264, 422, 456, 1195
Ecl136II GAGCTC 1 cut(s) 292
Eco130I CCWWGG 3 cut(s) 89, 110, 849
Eco147I AGGCCT 2 cut(s) 310, 1448
Eco24I GRGCYC 1 cut(s) 294
Eco47I GGWCC 1 cut(s) 203
Eco47III AGCGCT 1 cut(s) 576
Eco53kI GAGCTC 1 cut(s) 292
Eco57I CTGAAG 2 cut(s) 511, 824
Eco88I CYCGRG 1 cut(s) 620
EcoICRI GAGCTC 1 cut(s) 292
EcoO109I RGGNCCY 1 cut(s) 86
EcoRII CCWGG 4 cut(s) 48, 103, 1050, 1099
EcoT14I CCWWGG 3 cut(s) 89, 110, 849
EcoT22I ATGCAT 3 cut(s) 178, 1257, 1528
EcoT38I GRGCYC 1 cut(s) 294
ErhI CCWWGG 3 cut(s) 89, 110, 849
FalI AAGNNNNNCTT 2 cut(s) 1356, 1388
FaqI GGGAC 2 cut(s) 522, 715
FbaI TGATCA 1 cut(s) 766
FblI GTMKAC 1 cut(s) 1038
Fnu4HI GCNGC 5 cut(s) 119, 264, 573, 642, 998
FokI GGATG 1 cut(s) 1351
FriOI GRGCYC 1 cut(s) 294
Fsp4HI GCNGC 5 cut(s) 119, 264, 573, 642, 998
FspBI CTAG 3 cut(s) 90, 638, 969
FspI TGCGCA 1 cut(s) 395
GlaI GCGC 2 cut(s) 395, 576
GluI GCNGC 5 cut(s) 119, 264, 573, 642, 998
GsaI CCCAGC 2 cut(s) 1163, 1320
GsuI CTGGAG 3 cut(s) 403, 526, 1083
HaeII RGCGCY 1 cut(s) 578
HaeIII GGCC 6 cut(s) 87, 109, 191, 310, 986, 1448
HapII CCGG 3 cut(s) 806, 1208, 1334
HhaI GCGC 2 cut(s) 396, 577
Hin6I GCGC 2 cut(s) 394, 575
HinP1I GCGC 2 cut(s) 394, 575
HincII GTYRAC 3 cut(s) 799, 823, 1276
HindII GTYRAC 3 cut(s) 799, 823, 1276
HinfI GANTC 5 cut(s) 482, 745, 845, 1121, 1229
HpaI GTTAAC 1 cut(s) 799
HpaII CCGG 3 cut(s) 806, 1208, 1334
HphI GGTGA 1 cut(s) 386
Hpy166II GTNNAC 7 cut(s) 33, 434, 609, 799, 823, 1039, 1276
Hpy188I TCNGA 9 cut(s) 80, 131, 306, 446, 455, 876, 952, 1086, 1444
Hpy188III TCNNGA 7 cut(s) 43, 277, 749, 842, 1125, 1208, 1453
Hpy8I GTNNAC 7 cut(s) 33, 434, 609, 799, 823, 1039, 1276
HpyAV CCTTC 3 cut(s) 681, 1007, 1459
HpyCH4III ACNGT 2 cut(s) 244, 438
HpyCH4IV ACGT 4 cut(s) 430, 825, 1041, 1485
HpyF10VI GCNNNNNNNGC 4 cut(s) 115, 733, 1143, 1160
HpyF3I CTNAG 5 cut(s) 303, 677, 711, 993, 1085
HpySE526I ACGT 4 cut(s) 430, 825, 1041, 1485
HspAI GCGC 2 cut(s) 394, 575
Kpn2I TCCGGA 1 cut(s) 1207
Ksp22I TGATCA 1 cut(s) 766
KspAI GTTAAC 1 cut(s) 799
LmnI GCTCC 3 cut(s) 21, 853, 1313
Lsp1109I GCAGC 5 cut(s) 105, 250, 584, 628, 984
LweI GCATC 4 cut(s) 148, 381, 714, 1213
MaeI CTAG 3 cut(s) 90, 638, 969
MaeII ACGT 4 cut(s) 430, 825, 1041, 1485
MaeIII GTNAC 2 cut(s) 694, 862
MfeI CAATTG 2 cut(s) 1194, 1379
MflI RGATCY 3 cut(s) 446, 537, 1204
MhlI GDGCHC 2 cut(s) 294, 1179
MlsI TGGCCA 1 cut(s) 191
MluCI AATT 6 cut(s) 246, 472, 888, 1026, 1194, 1379
MluNI TGGCCA 1 cut(s) 191
MlyI GAGTC 2 cut(s) 854, 1238
MmeI TCCRAC 2 cut(s) 930, 1196
Mox20I TGGCCA 1 cut(s) 191
Mph1103I ATGCAT 3 cut(s) 178, 1257, 1528
MroI TCCGGA 1 cut(s) 1207
MroXI GAANNNNTTC 2 cut(s) 486, 744
MscI TGGCCA 1 cut(s) 191
MseI TTAA 6 cut(s) 11, 798, 1061, 1236, 1281, 1419
Msp20I TGGCCA 1 cut(s) 191
MspA1I CMGCKG 1 cut(s) 1146
MspI CCGG 3 cut(s) 806, 1208, 1334
MspR9I CCNGG 5 cut(s) 50, 105, 1052, 1101, 1335
MunI CAATTG 2 cut(s) 1194, 1379
MvaI CCWGG 4 cut(s) 50, 105, 1052, 1101
MwoI GCNNNNNNNGC 4 cut(s) 115, 733, 1143, 1160
NciI CCSGG 1 cut(s) 1335
NcoI CCATGG 1 cut(s) 110
NsbI TGCGCA 1 cut(s) 395
NsiI ATGCAT 3 cut(s) 178, 1257, 1528
NspI RCATGY 2 cut(s) 1441, 1464
PaeR7I CTCGAG 1 cut(s) 620
PceI AGGCCT 2 cut(s) 310, 1448
PciI ACATGT 2 cut(s) 1437, 1460
PdmI GAANNNNTTC 2 cut(s) 486, 744
PfeI GAWTC 3 cut(s) 482, 745, 1121
PflMI CCANNNNNTGG 1 cut(s) 939
PkrI GCNGC 5 cut(s) 120, 265, 574, 643, 999
PleI GAGTC 2 cut(s) 853, 1237
PpsI GAGTC 2 cut(s) 853, 1237
Ppu21I YACGTR 1 cut(s) 1486
PscI ACATGT 2 cut(s) 1437, 1460
Psp124BI GAGCTC 1 cut(s) 294
Psp6I CCWGG 4 cut(s) 48, 103, 1050, 1099
PspFI CCCAGC 2 cut(s) 1159, 1316
PspGI CCWGG 4 cut(s) 48, 103, 1050, 1099
PspPI GGNCC 4 cut(s) 86, 107, 203, 985
PspXI VCTCGAGB 1 cut(s) 620
PstI CTGCAG 3 cut(s) 268, 646, 910
PsuI RGATCY 3 cut(s) 446, 537, 1204
RsaI GTAC 3 cut(s) 435, 828, 1484
RsaNI GTAC 3 cut(s) 434, 827, 1483
SacI GAGCTC 1 cut(s) 294
SaqAI TTAA 6 cut(s) 11, 798, 1061, 1236, 1281, 1419
SatI GCNGC 5 cut(s) 119, 264, 573, 642, 998
Sau96I GGNCC 4 cut(s) 86, 107, 203, 985
SchI GAGTC 2 cut(s) 854, 1238
ScrFI CCNGG 5 cut(s) 50, 105, 1052, 1101, 1335
SduI GDGCHC 2 cut(s) 294, 1179
SfaNI GCATC 4 cut(s) 148, 381, 714, 1213
SfcI CTRYAG 5 cut(s) 264, 324, 642, 906, 921
Sfr274I CTCGAG 1 cut(s) 620
SinI GGWCC 1 cut(s) 203
SlaI CTCGAG 1 cut(s) 620
SmlI CTYRAG 2 cut(s) 620, 749
SmoI CTYRAG 2 cut(s) 620, 749
Sse9I AATT 6 cut(s) 246, 472, 888, 1026, 1194, 1379
SseBI AGGCCT 2 cut(s) 310, 1448
SsiI CCGC 1 cut(s) 1146
SspMI CTAG 3 cut(s) 90, 638, 969
SstI GAGCTC 1 cut(s) 294
StuI AGGCCT 2 cut(s) 310, 1448
StyD4I CCNGG 5 cut(s) 48, 103, 1050, 1099, 1333
StyI CCWWGG 3 cut(s) 89, 110, 849
TaaI ACNGT 2 cut(s) 244, 438
TaiI ACGT 4 cut(s) 433, 828, 1044, 1488
TaqI TCGA 7 cut(s) 480, 566, 621, 738, 936, 1011, 1290
TasI AATT 6 cut(s) 246, 472, 888, 1026, 1194, 1379
TatI WGTACW 1 cut(s) 433
TfiI GAWTC 3 cut(s) 482, 745, 1121
Tru1I TTAA 6 cut(s) 11, 798, 1061, 1236, 1281, 1419
Tru9I TTAA 6 cut(s) 11, 798, 1061, 1236, 1281, 1419
TscAI CASTG 1 cut(s) 535
TseI GCWGC 5 cut(s) 118, 263, 572, 641, 997
TspRI CASTG 1 cut(s) 535
Van91I CCANNNNNTGG 1 cut(s) 939
VpaK11BI GGWCC 1 cut(s) 203
XapI RAATTY 1 cut(s) 472
XceI RCATGY 2 cut(s) 1441, 1464
XcmI CCANNNNNNNNNTGG 1 cut(s) 108
XhoI CTCGAG 1 cut(s) 620
XmaJI CCTAGG 1 cut(s) 89
XmiI GTMKAC 1 cut(s) 1038
XmnI GAANNNNTTC 2 cut(s) 486, 744
XspI CTAG 3 cut(s) 90, 638, 969
Zsp2I ATGCAT 3 cut(s) 178, 1257, 1528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.