Rh7AG225000

FRIGIDA-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0000126
Physical Location & Seq
Forward (+)
21114889 .. 21117789
2901 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG225000.1

Sequence Viewer

Length: 1599 bp
ATGAAAGAGAGGAAACTTGAACAACAGGCAAAAGAGCTTGACTTGAAGCAAAAACAATATGATTCTCAGGTGAAGATGGTCCAGTTGATACATGCACCTGCTGCTAACAATGCCACTATTCCTTCATCTGCAACTGATGAATCCAGGTCCAGCATCAATATAGATGGTCGAGGCTTGCAGTTTTTTATGTATGAACAATTGAAGAAAATTGATTCAATGCGTGCCCAAATGTCGGCTGCTTTTCAAGTGTCATCAGACCCTGGAAATTTGGTTTTGGATGCAATGCAAGGATTTTACCCTTCAAATTCAAATATGGGAAAGAGGGAGACTGATTTTGATCTGAGCTTTATTAGAAGAAGTTGTATTCTTCTGTTACAGGAGTTAAAGAGGATGTCACCACAACTTAATCCTGGGGTAAGAGAAAAAGCATTGAAGTTGGCAGCTCATTGGAAGGCCAAGTTGACAGTGGCCACTAATAATTCGTTGGAGGTTTTGGGATTTTTGCGGCTTGTAACTGCATTTGAATTAACCTCTGCTTATGATGCCAATGAGCTTCAGAGTCTTCTTTCTGTAGTTACTCAGCCCGAACAAGCAGCTCAATTAAGAAAGGCTCTCGGTGTCAAAGATAAGGAACCTTCAACCAACAGCATTTCTCCCCTAGTCAAAGTGGTGGAACCAGCATCTACCAATGCAGCAACCTTTCCTTCTTCAAATATTCAACCAAATGTCACTAAGGATGCAGGGAATGTGTCGGGGTTTGGAAATAAGCCTTTAAGTGGGAATCATTCTATACTGGCTGCTTCTGTTCCATTGTCATCAGACCCAGCTAAACTCGTGTTGGATAGCATCCAAAAATCTCTTGCTGAATACTTGCGAAATGGAGATTGTGAAGAAAGTATCATGTCAAGAAACATTAGCCTATTGGAGGAGCTAATGAGAGTTTCACGACTTTCACCAAATGTTGGACCTAATCTGAAAGCAGAAGCAACAAATCTATCAGTCCAGTGGAAAGCAAAGATGGCAGGAAATACTGAGAAGTCATTGGAGGGTGTAGGATTTTTGCTATTTTTAGCTACATATGGATTGCTTTCTACGTTAAATGCTGATGAGATTGTAAAGCATCTTGGGTTGATTTGTCACCATAAACAGGCTCTAGAATTATGCCAGGCACGTGGTTTTGCAGATAAGATTGGTGAATTTATTCGGATCCTTGTTGAAAAGAAGCAACTTATTGAGGCTGTTAGATTTATTTTCGCGTTCAAGTTAACTGACAAGCTTTCCCCAGTCCAACTTTTAAAAGAATATTTGGAGGATACAAAAAAGTGTTCTGAAGCAATTTTCATGTTGCAGATATCACAAGATGAAAAGGAGAAGGTGGCAGATGGTCTGTTAGGTGATCTAAGAGCTGTGCATCAATACATTAAGGATTACAATCTTGAGTCCAAATACCCATCTGCAGACATTGAAATGCAAATAGTTAAGCTGGAAACAGTAAAGTCTTCCCCTGCCTCCAATGTCGAACAGCAAGAGCAGAGAAAAAGGAAGAAACCTAGTGCTGGCACTTCGACCCTTGAGATCCAACCACCACAACAGGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida

Protein Analysis

532

Amino Acids

58.88

Weight (kDa)

8.53

Isoelectric Point (pI)

49.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 53 - 210 6.6e-37 Frigida-like protein
Frigida PF07899 271 - 504 1.4e-51 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 106
Acc36I ACCTGC 1 cut(s) 106
AccB7I CCANNNNNTGG 1 cut(s) 962
AccII CGCG 1 cut(s) 1256
AciI CCGC 1 cut(s) 505
AclWI GGATC 3 cut(s) 1201, 1214, 1570
AcoI YGGCCR 1 cut(s) 468
AcsI RAATTY 3 cut(s) 265, 304, 1196
AcuI CTGAAG 2 cut(s) 539, 1350
AcvI CACGTG 1 cut(s) 1172
AfiI CCNNNNNNNGG 6 cut(s) 232, 776, 925, 962, 1147, 1556
AjnI CCWGG 4 cut(s) 143, 259, 409, 1164
Alw26I GTCTC 1 cut(s) 320
AlwI GGATC 3 cut(s) 1201, 1214, 1570
AlwNI CAGNNNCTG 1 cut(s) 260
AoxI GGCC 3 cut(s) 453, 468, 1593
ApeKI GCWGC 6 cut(s) 101, 236, 440, 593, 692, 797
ApoI RAATTY 3 cut(s) 265, 304, 1196
Asp700I GAANNNNTTC 1 cut(s) 1200
AspS9I GGNCC 3 cut(s) 79, 147, 965
AsuHPI GGTGA 6 cut(s) 82, 387, 945, 1130, 1205, 1406
AvaII GGWCC 3 cut(s) 79, 147, 965
BaeGI GKGCMC 1 cut(s) 226
BalI TGGCCA 1 cut(s) 470
BamHI GGATCC 1 cut(s) 1206
BauI CACGAG 1 cut(s) 833
BbrPI CACGTG 1 cut(s) 1172
BbsI GAAGAC 2 cut(s) 554, 1491
BbvI GCAGC 6 cut(s) 88, 223, 452, 605, 704, 784
BccI CCATC 5 cut(s) 70, 158, 1012, 1376, 1459
BciT130I CCWGG 4 cut(s) 145, 261, 411, 1166
BciVI GTATCC 1 cut(s) 1306
BcoDI GTCTC 1 cut(s) 320
BfaI CTAG 3 cut(s) 659, 1154, 1551
BfmI CTRYAG 2 cut(s) 570, 1455
BfuAI ACCTGC 1 cut(s) 106
BfuI GTATCC 1 cut(s) 1306
BisI GCNGC 7 cut(s) 102, 237, 441, 506, 594, 693, 798
BlsI GCNGC 7 cut(s) 103, 238, 442, 507, 595, 694, 799
Bme1390I CCNGG 4 cut(s) 145, 261, 411, 1166
Bme18I GGWCC 3 cut(s) 79, 147, 965
BmgT120I GGNCC 3 cut(s) 79, 147, 965
BmiI GGNNCC 3 cut(s) 633, 675, 1208
BmrFI CCNGG 4 cut(s) 145, 261, 411, 1166
BmrI ACTGGG 1 cut(s) 1277
BmsI GCATC 8 cut(s) 162, 268, 532, 689, 727, 855, 1129, 1420
BmuI ACTGGG 1 cut(s) 1277
BpiI GAAGAC 2 cut(s) 554, 1491
BpuEI CTTGAG 2 cut(s) 1457, 1592
BsaAI YACGTR 1 cut(s) 1172
BsaBI GATNNNNATC 2 cut(s) 336, 1431
BsaJI CCNNGG 2 cut(s) 259, 410
Bsc4I CCNNNNNNNGG 6 cut(s) 232, 776, 925, 962, 1147, 1556
Bse1I ACTGG 4 cut(s) 82, 798, 1003, 1283
Bse3DI GCAATG 1 cut(s) 288
Bse8I GATNNNNATC 2 cut(s) 336, 1431
BseBI CCWGG 4 cut(s) 145, 261, 411, 1166
BseDI CCNNGG 2 cut(s) 259, 410
BseGI GGATG 4 cut(s) 283, 396, 742, 846
BseJI GATNNNNATC 2 cut(s) 336, 1431
BseLI CCNNNNNNNGG 6 cut(s) 232, 776, 925, 962, 1147, 1556
BseMI GCAATG 1 cut(s) 288
BseMII CTCAG 4 cut(s) 80, 332, 593, 1023
BseNI ACTGG 4 cut(s) 82, 798, 1003, 1283
BseRI GAGGAG 1 cut(s) 941
BseSI GKGCMC 1 cut(s) 226
BseXI GCAGC 6 cut(s) 88, 223, 452, 605, 704, 784
BseYI CCCAGC 1 cut(s) 823
Bsh1236I CGCG 1 cut(s) 1256
BshFI GGCC 3 cut(s) 455, 470, 1595
BslI CCNNNNNNNGG 6 cut(s) 232, 776, 925, 962, 1147, 1556
BsmAI GTCTC 1 cut(s) 320
BsnI GGCC 3 cut(s) 455, 470, 1595
Bsp1286I GDGCHC 1 cut(s) 226
Bsp143I GATC 4 cut(s) 337, 1206, 1396, 1575
BspACI CCGC 1 cut(s) 505
BspANI GGCC 3 cut(s) 455, 470, 1595
BspCNI CTCAG 4 cut(s) 79, 333, 592, 1024
BspFNI CGCG 1 cut(s) 1256
BspLI GGNNCC 3 cut(s) 633, 675, 1208
BspMAI CTGCAG 1 cut(s) 1459
BspMI ACCTGC 1 cut(s) 106
BspPI GGATC 3 cut(s) 1201, 1214, 1570
BsrDI GCAATG 1 cut(s) 288
BsrI ACTGG 4 cut(s) 82, 798, 1003, 1283
BssECI CCNNGG 2 cut(s) 259, 410
BssMI GATC 4 cut(s) 337, 1206, 1396, 1575
BssSI CACGAG 1 cut(s) 833
Bst2BI CACGAG 1 cut(s) 833
Bst2UI CCWGG 4 cut(s) 145, 261, 411, 1166
Bst4CI ACNGT 2 cut(s) 466, 1492
BstAPI GCANNNNNTGC 1 cut(s) 101
BstBAI YACGTR 1 cut(s) 1172
BstC8I GCNNGC 3 cut(s) 176, 222, 1558
BstDEI CTNAG 6 cut(s) 66, 341, 579, 732, 1032, 1400
BstENI CCTNNNNNAGG 1 cut(s) 923
BstF5I GGATG 4 cut(s) 283, 396, 742, 846
BstFNI CGCG 1 cut(s) 1256
BstKTI GATC 4 cut(s) 340, 1209, 1399, 1578
BstMAI GTCTC 1 cut(s) 320
BstMBI GATC 4 cut(s) 337, 1206, 1396, 1575
BstMWI GCNNNNNNNGC 4 cut(s) 101, 110, 542, 1019
BstNI CCWGG 4 cut(s) 145, 261, 411, 1166
BstNSI RCATGY 1 cut(s) 95
BstSCI CCNGG 4 cut(s) 143, 259, 409, 1164
BstSFI CTRYAG 2 cut(s) 570, 1455
BstSLI GKGCMC 1 cut(s) 226
BstUI CGCG 1 cut(s) 1256
BstV1I GCAGC 6 cut(s) 88, 223, 452, 605, 704, 784
BstV2I GAAGAC 2 cut(s) 554, 1491
BstX2I RGATCY 2 cut(s) 1206, 1575
BstXI CCANNNNNNTGG 1 cut(s) 1172
BstYI RGATCY 2 cut(s) 1206, 1575
BsuI GTATCC 1 cut(s) 1306
BsuRI GGCC 3 cut(s) 455, 470, 1595
BtsCI GGATG 4 cut(s) 283, 396, 742, 846
BtsIMutI CAGTG 2 cut(s) 471, 1010
BveI ACCTGC 1 cut(s) 106
Cac8I GCNNGC 3 cut(s) 176, 222, 1558
CaiI CAGNNNCTG 1 cut(s) 260
Cfr13I GGNCC 3 cut(s) 79, 147, 965
CviAII CATG 3 cut(s) 92, 901, 1342
DdeI CTNAG 6 cut(s) 66, 341, 579, 732, 1032, 1400
DpnI GATC 4 cut(s) 339, 1208, 1398, 1577
DpnII GATC 4 cut(s) 337, 1206, 1396, 1575
DraI TTTAAA 1 cut(s) 1296
EaeI YGGCCR 1 cut(s) 468
Eco147I AGGCCT 1 cut(s) 1595
Eco32I GATATC 1 cut(s) 1353
Eco47I GGWCC 3 cut(s) 79, 147, 965
Eco57I CTGAAG 2 cut(s) 539, 1350
Eco72I CACGTG 1 cut(s) 1172
EcoNI CCTNNNNNAGG 1 cut(s) 923
EcoRII CCWGG 4 cut(s) 143, 259, 409, 1164
EcoRV GATATC 1 cut(s) 1353
FaeI CATG 3 cut(s) 95, 904, 1345
FatI CATG 3 cut(s) 91, 900, 1341
FauNDI CATATG 1 cut(s) 1078
Fnu4HI GCNGC 7 cut(s) 102, 237, 441, 506, 594, 693, 798
FokI GGATG 4 cut(s) 290, 403, 749, 833
Fsp4HI GCNGC 7 cut(s) 102, 237, 441, 506, 594, 693, 798
FspBI CTAG 3 cut(s) 659, 1154, 1551
GluI GCNGC 7 cut(s) 102, 237, 441, 506, 594, 693, 798
GsaI CCCAGC 1 cut(s) 827
HaeIII GGCC 3 cut(s) 455, 470, 1595
Hin1II CATG 3 cut(s) 95, 904, 1345
HincII GTYRAC 2 cut(s) 462, 1266
HindII GTYRAC 2 cut(s) 462, 1266
HindIII AAGCTT 1 cut(s) 1274
HinfI GANTC 6 cut(s) 62, 140, 212, 559, 781, 1439
HpaI GTTAAC 1 cut(s) 1266
HphI GGTGA 6 cut(s) 82, 387, 945, 1130, 1205, 1406
Hpy166II GTNNAC 2 cut(s) 462, 1266
Hpy188I TCNGA 7 cut(s) 256, 342, 558, 820, 975, 1206, 1330
Hpy188III TCNNGA 4 cut(s) 906, 945, 1154, 1436
Hpy8I GTNNAC 2 cut(s) 462, 1266
HpyAV CCTTC 6 cut(s) 132, 309, 445, 645, 714, 1366
HpyCH4III ACNGT 2 cut(s) 466, 1492
HpyCH4IV ACGT 2 cut(s) 1094, 1171
HpyF10VI GCNNNNNNNGC 4 cut(s) 101, 110, 542, 1019
HpyF3I CTNAG 6 cut(s) 66, 341, 579, 732, 1032, 1400
HpySE526I ACGT 2 cut(s) 1094, 1171
Hsp92II CATG 3 cut(s) 95, 904, 1345
KspAI GTTAAC 1 cut(s) 1266
Kzo9I GATC 4 cut(s) 337, 1206, 1396, 1575
LmnI GCTCC 1 cut(s) 928
Lsp1109I GCAGC 6 cut(s) 88, 223, 452, 605, 704, 784
LweI GCATC 8 cut(s) 162, 268, 532, 689, 727, 855, 1129, 1420
MaeI CTAG 3 cut(s) 659, 1154, 1551
MaeII ACGT 2 cut(s) 1094, 1171
MaeIII GTNAC 6 cut(s) 372, 393, 511, 574, 727, 1136
MalI GATC 4 cut(s) 339, 1208, 1398, 1577
MboI GATC 4 cut(s) 337, 1206, 1396, 1575
MboII GAAGA 9 cut(s) 85, 214, 359, 366, 554, 699, 902, 1491, 1555
MfeI CAATTG 1 cut(s) 197
MflI RGATCY 2 cut(s) 1206, 1575
MhlI GDGCHC 1 cut(s) 226
MlsI TGGCCA 1 cut(s) 470
MluNI TGGCCA 1 cut(s) 470
MlyI GAGTC 2 cut(s) 568, 1448
MmeI TCCRAC 4 cut(s) 465, 819, 943, 1312
Mox20I TGGCCA 1 cut(s) 470
MroXI GAANNNNTTC 1 cut(s) 1200
MscI TGGCCA 1 cut(s) 470
MslI CAYNNNNRTG 1 cut(s) 1466
Msp20I TGGCCA 1 cut(s) 470
MspR9I CCNGG 4 cut(s) 145, 261, 411, 1166
MunI CAATTG 1 cut(s) 197
MvaI CCWGG 4 cut(s) 145, 261, 411, 1166
MvnI CGCG 1 cut(s) 1256
MwoI GCNNNNNNNGC 4 cut(s) 101, 110, 542, 1019
NdeI CATATG 1 cut(s) 1078
NdeII GATC 4 cut(s) 337, 1206, 1396, 1575
NlaIII CATG 3 cut(s) 95, 904, 1345
NlaIV GGNNCC 3 cut(s) 633, 675, 1208
NmuCI GTSAC 3 cut(s) 393, 727, 1136
NspI RCATGY 1 cut(s) 95
PaqCI CACCTGC 1 cut(s) 106
PceI AGGCCT 1 cut(s) 1595
PdmI GAANNNNTTC 1 cut(s) 1200
PfeI GAWTC 4 cut(s) 62, 140, 212, 781
PflMI CCANNNNNTGG 1 cut(s) 962
PkrI GCNGC 7 cut(s) 103, 238, 442, 507, 595, 694, 799
PleI GAGTC 2 cut(s) 567, 1447
PmaCI CACGTG 1 cut(s) 1172
PmlI CACGTG 1 cut(s) 1172
PpsI GAGTC 2 cut(s) 567, 1447
Ppu21I YACGTR 1 cut(s) 1172
Psp6I CCWGG 4 cut(s) 143, 259, 409, 1164
PspCI CACGTG 1 cut(s) 1172
PspFI CCCAGC 1 cut(s) 823
PspGI CCWGG 4 cut(s) 143, 259, 409, 1164
PspN4I GGNNCC 3 cut(s) 633, 675, 1208
PspPI GGNCC 3 cut(s) 79, 147, 965
PstI CTGCAG 1 cut(s) 1459
PstNI CAGNNNCTG 1 cut(s) 260
PsuI RGATCY 2 cut(s) 1206, 1575
RseI CAYNNNNRTG 1 cut(s) 1466
SatI GCNGC 7 cut(s) 102, 237, 441, 506, 594, 693, 798
Sau3AI GATC 4 cut(s) 337, 1206, 1396, 1575
Sau96I GGNCC 3 cut(s) 79, 147, 965
SchI GAGTC 2 cut(s) 568, 1448
ScrFI CCNGG 4 cut(s) 145, 261, 411, 1166
SduI GDGCHC 1 cut(s) 226
SfaNI GCATC 8 cut(s) 162, 268, 532, 689, 727, 855, 1129, 1420
SfcI CTRYAG 2 cut(s) 570, 1455
SinI GGWCC 3 cut(s) 79, 147, 965
SmiMI CAYNNNNRTG 1 cut(s) 1466
SmlI CTYRAG 2 cut(s) 1436, 1571
SmoI CTYRAG 2 cut(s) 1436, 1571
SseBI AGGCCT 1 cut(s) 1595
SsiI CCGC 1 cut(s) 505
SspI AATATT 2 cut(s) 715, 1304
SspMI CTAG 3 cut(s) 659, 1154, 1551
StuI AGGCCT 1 cut(s) 1595
StyD4I CCNGG 4 cut(s) 143, 259, 409, 1164
TaaI ACNGT 2 cut(s) 466, 1492
TaiI ACGT 2 cut(s) 1097, 1174
TaqI TCGA 3 cut(s) 169, 1518, 1565
TauI GCSGC 1 cut(s) 508
TfiI GAWTC 4 cut(s) 62, 140, 212, 781
TscAI CASTG 2 cut(s) 471, 1010
TseFI GTSAC 3 cut(s) 393, 727, 1136
TseI GCWGC 6 cut(s) 101, 236, 440, 593, 692, 797
Tsp45I GTSAC 3 cut(s) 393, 727, 1136
TspDTI ATGAA 6 cut(s) 17, 114, 153, 207, 1330, 1377
TspRI CASTG 2 cut(s) 471, 1010
Van91I CCANNNNNTGG 1 cut(s) 962
VpaK11BI GGWCC 3 cut(s) 79, 147, 965
XagI CCTNNNNNAGG 1 cut(s) 923
XapI RAATTY 3 cut(s) 265, 304, 1196
XbaI TCTAGA 1 cut(s) 1153
XceI RCATGY 1 cut(s) 95
XcmI CCANNNNNNNNNTGG 1 cut(s) 463
XmnI GAANNNNTTC 1 cut(s) 1200
XspI CTAG 3 cut(s) 659, 1154, 1551
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.