Rh7DG447300

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000126
Physical Location & Seq
Reverse (-)
63461556 .. 63464688
3133 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG447300.1

Sequence Viewer

Length: 1695 bp
ATGTCTTCCGTACAGTTAGGGTTTTCAGAGGCGATGGTCGAAGTCGCAGCCACCGAGGCTGACGTCGGCATTGCGTGTCAGACCGTGCAATCCCATCTCTCTTACCTTGTTGATCAAGTGAGCTTGGGGTTGGGGATGAGCACGGAGCATCACGCCCGAGCCCAGGAGCTCGGTTCGAGGGAGGAGAGGCTCAACCAACGCCTCCGCGAGGTTGAATCCAAAGAAAAGCTGTTGGATTCACTCTGCCGAAGACTCGAAAAGAGAGAGAAGAAAATTGAAGAGCCTCGAGTCAAGACGGAGGAGGAGCAGTCGGTGGATCAATCTATCATGAACATGGACTGTCGCGAGTTGCTGGTGTTCATGAACGAACAATTCAGAAGAATTGATTTGGCGGGAACCCGGATGTCGGCTGTTCTTCAAGCATCTCCAGACCCTGGAAAGGTGGTTCTGGAAGCAGTGCGAGGGTTTTATCCTTTGAATCGGAATGTGGATGGAAGAGAGACTGAAATGAGTTCGAGGTGTATGAGAAAGAGTTGTGTTCTGTTGTTGCAGGAGTTGAAGAGAATGTCGCCGCAAATTAGTGCTCCGGTGAGAGAGGAGGCAAAGAAGTTAGCAGCTGAGTGGAAAGCGAAGATGAAGGAGGGCAGTGAGAATAGTTGGGAGGCCAAAGGGCTTTTGCGGCTCATTGCTGCTGCTTATGGTTTGGATGGTATTTGTGATGCTGAGGAGCTTCAGAGTCTTGTTGCTATGGTGGAGCAGCCGGAACAATCTAGTGAACTAAGAAGGACTCTTGGTTTGACAGATGAGGCACCGGGGACCAATACCAATTCTTCGATTGTTAAGATTGAGGGACGAGAATCTTCACTGGCTAGAAATGTAGCGACTCTTTCTTCTCCGAATCATTCTTTACAGGATGACATGTTGATTTCTCTTCGATTGTCATCGGACCCAGCAAAGCTTGTGTTGAAATTGATAAAAAGATCTTTAAGCCAATACTGGACAAATGGTGATGTTAGCTCCAAAGAAACAGTTGTATCGAGTAACATTTCTCTGTTGAATTTTCTAATGGGAGCCTCAGCGTGTGTTGGACCTCATCTGAAAGATGGTGCAACAAATCTAGCAGCCCAGTGGAAAGCAAATATGACAGCTGATACTGAAAACTCATTGGAGAATTTGGGATTTTCGCTGTTTATAGCTATATATGGATTGCTTTCTACTTTAAACGAAGATGAAATTGTAAGGCTTCTTGGGAGGATTTCACAGCATAAACGGTCCCTAGAATTATGTCAGACACATGGTTTTGCATATAAGATTGCTGGTCTTATTGGGAAACTTATTGAAAAGAAGCAAGTGATTGACGCTGTTAGATCGATTTGTTTGTTCAAGTTGATTGACAAGTTTCCCCCAGTACCGTTGTTAAAAGCATATGTGCAGGATGCAAAGGAGTGGTCTGAATTAGTTTGCAGCTTAAAGATATCAGATGCTGAAAAGGAGAAGGCTGTAAATGGAAAAATAGCTGATCTTAGAGCTGTCATTCAATGCATCAAAGATTGCAACCTTGAGTCTGAATACCCGCCCATGACTGTTGAAATGCAAATAGATCAGCTGCAAATACTCGAGGAGAATTGGAGACCATCTTGTGTCTCCAAAGTTAGACAACAAGAGAGAAAAAGGAAGAGACCTAATATCAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida TEX13

Protein Analysis

564

Amino Acids

63.15

Weight (kDa)

6.48

Isoelectric Point (pI)

54.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 101 - 271 5.5e-32 Frigida-like protein
Frigida PF07899 289 - 537 1.9e-52 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 66
AccB1I GGYRCC 1 cut(s) 808
AccB7I CCANNNNNTGG 1 cut(s) 434
AccII CGCG 2 cut(s) 207, 345
AciI CCGC 5 cut(s) 205, 392, 572, 679, 1574
AclWI GGATC 1 cut(s) 324
AcsI RAATTY 2 cut(s) 1057, 1171
AcuI CTGAAG 1 cut(s) 716
AcyI GRCGYC 1 cut(s) 63
AfaI GTAC 2 cut(s) 12, 1410
AfiI CCNNNNNNNGG 5 cut(s) 163, 208, 406, 434, 439
AflIII ACRYGT 1 cut(s) 918
AjnI CCWGG 2 cut(s) 162, 433
AloI GAACNNNNNNTCC 2 cut(s) 429, 461
Alw21I GWGCWC 3 cut(s) 143, 171, 586
Alw26I GTCTC 4 cut(s) 494, 1624, 1648, 1672
AlwI GGATC 1 cut(s) 324
AlwNI CAGNNNCTG 2 cut(s) 434, 1484
Ama87I CYCGRG 3 cut(s) 156, 285, 1616
AoxI GGCC 1 cut(s) 663
ApeKI GCWGC 8 cut(s) 47, 614, 689, 692, 757, 1121, 1464, 1606
ApoI RAATTY 2 cut(s) 1057, 1171
ArsI GACNNNNNNTTYG 4 cut(s) 778, 810, 1433, 1465
AspS9I GGNCC 4 cut(s) 816, 946, 1088, 1272
AsuC2I CCSGG 2 cut(s) 400, 813
AsuHPI GGTGA 2 cut(s) 601, 1019
AvaI CYCGRG 3 cut(s) 156, 285, 1616
AvaII GGWCC 4 cut(s) 816, 946, 1088, 1272
BaeI ACNNNNGTAYC 2 cut(s) 1017, 1050
BanI GGYRCC 1 cut(s) 808
BanII GRGCYC 2 cut(s) 163, 171
BbsI GAAGAC 1 cut(s) 256
Bbv12I GWGCWC 3 cut(s) 143, 171, 586
BbvCI CCTCAGC 2 cut(s) 723, 1075
BbvI GCAGC 8 cut(s) 59, 626, 676, 679, 769, 1133, 1476, 1593
BccI CCATC 6 cut(s) 28, 102, 485, 701, 1097, 1642
BciT130I CCWGG 2 cut(s) 164, 435
BclI TGATCA 1 cut(s) 112
BcnI CCSGG 2 cut(s) 400, 813
BcoDI GTCTC 4 cut(s) 494, 1624, 1648, 1672
BfaI CTAG 4 cut(s) 771, 870, 1118, 1277
BglI GCCNNNNNGGC 1 cut(s) 56
BglII AGATCT 1 cut(s) 980
Bme1390I CCNGG 4 cut(s) 164, 400, 435, 813
Bme18I GGWCC 4 cut(s) 816, 946, 1088, 1272
BmeT110I CYCGRG 3 cut(s) 156, 285, 1616
BmgT120I GGNCC 4 cut(s) 816, 946, 1088, 1272
BmiI GGNNCC 6 cut(s) 397, 810, 817, 948, 1072, 1274
BmrFI CCNGG 4 cut(s) 164, 400, 435, 813
BmrI ACTGGG 2 cut(s) 1120, 1400
BmsI GCATC 6 cut(s) 157, 431, 709, 1426, 1471, 1551
BmuI ACTGGG 2 cut(s) 1120, 1400
BpiI GAAGAC 1 cut(s) 256
BpmI CTGGAG 1 cut(s) 411
Bpu10I CCTNAGC 2 cut(s) 723, 1075
BpuEI CTTGAG 1 cut(s) 1580
BpuMI CCSGG 2 cut(s) 400, 813
Bsa29I ATCGAT 1 cut(s) 1370
BsaBI GATNNNNATC 1 cut(s) 940
BsaHI GRCGYC 1 cut(s) 63
BsaI GGTCTC 2 cut(s) 1624, 1672
BsaJI CCNNGG 4 cut(s) 54, 162, 433, 812
BsaWI WCCGGW 1 cut(s) 586
BsaXI ACNNNNNCTCC 2 cut(s) 293, 323
Bsc4I CCNNNNNNNGG 5 cut(s) 163, 208, 406, 434, 439
Bse1I ACTGG 4 cut(s) 870, 1001, 1126, 1406
Bse3DI GCAATG 2 cut(s) 69, 684
Bse8I GATNNNNATC 1 cut(s) 940
BseBI CCWGG 2 cut(s) 164, 435
BseCI ATCGAT 1 cut(s) 1370
BseDI CCNNGG 4 cut(s) 54, 162, 433, 812
BseGI GGATG 6 cut(s) 141, 408, 496, 712, 919, 1441
BseJI GATNNNNATC 1 cut(s) 940
BseLI CCNNNNNNNGG 5 cut(s) 163, 208, 406, 434, 439
BseMI GCAATG 2 cut(s) 69, 684
BseMII CTCAG 3 cut(s) 609, 714, 1089
BseNI ACTGG 4 cut(s) 870, 1001, 1126, 1406
BseRI GAGGAG 6 cut(s) 197, 314, 317, 611, 740, 1634
BseXI GCAGC 8 cut(s) 59, 626, 676, 679, 769, 1133, 1476, 1593
BseYI CCCAGC 1 cut(s) 949
BsgI GTGCAG 1 cut(s) 1451
Bsh1236I CGCG 2 cut(s) 207, 345
BshFI GGCC 1 cut(s) 665
BshNI GGYRCC 1 cut(s) 808
BshVI ATCGAT 1 cut(s) 1370
BsiHKAI GWGCWC 3 cut(s) 143, 171, 586
BsiHKCI CYCGRG 3 cut(s) 156, 285, 1616
BsiSI CCGG 4 cut(s) 400, 587, 761, 812
BslFI GGGAC 3 cut(s) 829, 864, 1258
BslI CCNNNNNNNGG 5 cut(s) 163, 208, 406, 434, 439
BsmAI GTCTC 4 cut(s) 494, 1624, 1648, 1672
BsmFI GGGAC 3 cut(s) 829, 864, 1258
BsnI GGCC 1 cut(s) 665
Bso31I GGTCTC 2 cut(s) 1624, 1672
BsoBI CYCGRG 3 cut(s) 156, 285, 1616
Bsp1286I GDGCHC 4 cut(s) 143, 163, 171, 586
Bsp143I GATC 6 cut(s) 112, 316, 980, 1367, 1519, 1600
Bsp68I TCGCGA 1 cut(s) 345
BspACI CCGC 5 cut(s) 205, 392, 572, 679, 1574
BspANI GGCC 1 cut(s) 665
BspCNI CTCAG 3 cut(s) 610, 715, 1088
BspDI ATCGAT 1 cut(s) 1370
BspFNI CGCG 2 cut(s) 207, 345
BspHI TCATGA 2 cut(s) 327, 360
BspLI GGNNCC 6 cut(s) 397, 810, 817, 948, 1072, 1274
BspPI GGATC 1 cut(s) 324
BspQI GCTCTTC 1 cut(s) 273
BspT107I GGYRCC 1 cut(s) 808
BspTNI GGTCTC 2 cut(s) 1624, 1672
BsrDI GCAATG 2 cut(s) 69, 684
BsrI ACTGG 4 cut(s) 870, 1001, 1126, 1406
BssECI CCNNGG 4 cut(s) 54, 162, 433, 812
BssMI GATC 6 cut(s) 112, 316, 980, 1367, 1519, 1600
BssNI GRCGYC 1 cut(s) 63
Bst2UI CCWGG 2 cut(s) 164, 435
Bst4CI ACNGT 7 cut(s) 15, 85, 341, 1030, 1272, 1413, 1585
Bst6I CTCTTC 5 cut(s) 273, 490, 554, 936, 1670
BstACI GRCGYC 1 cut(s) 63
BstDEI CTNAG 5 cut(s) 618, 723, 779, 1075, 1523
BstENI CCTNNNNNAGG 1 cut(s) 206
BstF5I GGATG 6 cut(s) 141, 408, 496, 712, 919, 1441
BstFNI CGCG 2 cut(s) 207, 345
BstKTI GATC 6 cut(s) 115, 319, 983, 1370, 1522, 1603
BstMAI GTCTC 4 cut(s) 494, 1624, 1648, 1672
BstMBI GATC 6 cut(s) 112, 316, 980, 1367, 1519, 1600
BstMWI GCNNNNNNNGC 2 cut(s) 56, 679
BstNI CCWGG 2 cut(s) 164, 435
BstNSI RCATGY 1 cut(s) 922
BstSCI CCNGG 4 cut(s) 162, 398, 433, 811
BstUI CGCG 2 cut(s) 207, 345
BstV1I GCAGC 8 cut(s) 59, 626, 676, 679, 769, 1133, 1476, 1593
BstV2I GAAGAC 1 cut(s) 256
BstX2I RGATCY 1 cut(s) 980
BstYI RGATCY 1 cut(s) 980
Bsu15I ATCGAT 1 cut(s) 1370
BsuRI GGCC 1 cut(s) 665
BsuTUI ATCGAT 1 cut(s) 1370
BtgZI GCGATG 1 cut(s) 47
BtsCI GGATG 6 cut(s) 141, 408, 496, 712, 919, 1441
BtsI GCAGTG 2 cut(s) 462, 652
BtsIMutI CAGTG 4 cut(s) 462, 652, 863, 1133
BtuMI TCGCGA 1 cut(s) 345
CaiI CAGNNNCTG 2 cut(s) 434, 1484
CciI TCATGA 2 cut(s) 327, 360
Cfr13I GGNCC 4 cut(s) 816, 946, 1088, 1272
ClaI ATCGAT 1 cut(s) 1370
CseI GACGC 1 cut(s) 1367
Csp6I GTAC 2 cut(s) 11, 1409
CviAII CATG 6 cut(s) 328, 334, 361, 919, 1295, 1579
CviQI GTAC 2 cut(s) 11, 1409
DdeI CTNAG 5 cut(s) 618, 723, 779, 1075, 1523
DpnI GATC 6 cut(s) 114, 318, 982, 1369, 1521, 1602
DpnII GATC 6 cut(s) 112, 316, 980, 1367, 1519, 1600
DraI TTTAAA 1 cut(s) 1221
Eam1104I CTCTTC 5 cut(s) 273, 490, 554, 936, 1670
EarI CTCTTC 5 cut(s) 273, 490, 554, 936, 1670
Ecl136II GAGCTC 1 cut(s) 169
Eco24I GRGCYC 2 cut(s) 163, 171
Eco31I GGTCTC 2 cut(s) 1624, 1672
Eco32I GATATC 1 cut(s) 1476
Eco47I GGWCC 4 cut(s) 816, 946, 1088, 1272
Eco53kI GAGCTC 1 cut(s) 169
Eco57I CTGAAG 1 cut(s) 716
Eco88I CYCGRG 3 cut(s) 156, 285, 1616
EcoICRI GAGCTC 1 cut(s) 169
EcoNI CCTNNNNNAGG 1 cut(s) 206
EcoRII CCWGG 2 cut(s) 162, 433
EcoRV GATATC 1 cut(s) 1476
EcoT22I ATGCAT 1 cut(s) 1544
EcoT38I GRGCYC 2 cut(s) 163, 171
FaeI CATG 6 cut(s) 331, 337, 364, 922, 1298, 1582
FaqI GGGAC 3 cut(s) 829, 864, 1258
FatI CATG 6 cut(s) 327, 333, 360, 918, 1294, 1578
FauI CCCGC 2 cut(s) 385, 1581
FauNDI CATATG 1 cut(s) 1426
FbaI TGATCA 1 cut(s) 112
FokI GGATG 6 cut(s) 148, 415, 503, 719, 926, 1448
FriOI GRGCYC 2 cut(s) 163, 171
FspBI CTAG 4 cut(s) 771, 870, 1118, 1277
GsaI CCCAGC 1 cut(s) 953
GsuI CTGGAG 1 cut(s) 411
HaeIII GGCC 1 cut(s) 665
HapII CCGG 4 cut(s) 400, 587, 761, 812
HgaI GACGC 1 cut(s) 1367
Hin1I GRCGYC 1 cut(s) 63
Hin1II CATG 6 cut(s) 331, 337, 364, 922, 1298, 1582
HindIII AAGCTT 1 cut(s) 956
HpaII CCGG 4 cut(s) 400, 587, 761, 812
HphI GGTGA 2 cut(s) 601, 1019
Hpy166II GTNNAC 1 cut(s) 776
Hpy188III TCNNGA 6 cut(s) 292, 328, 344, 361, 428, 449
Hpy8I GTNNAC 1 cut(s) 776
Hpy99I CGWCG 1 cut(s) 68
HpyAV CCTTC 3 cut(s) 631, 777, 1489
HpyCH4III ACNGT 7 cut(s) 15, 85, 341, 1030, 1272, 1413, 1585
HpyCH4IV ACGT 1 cut(s) 63
HpyF10VI GCNNNNNNNGC 2 cut(s) 56, 679
HpyF3I CTNAG 5 cut(s) 618, 723, 779, 1075, 1523
HpySE526I ACGT 1 cut(s) 63
Hsp92I GRCGYC 1 cut(s) 63
Hsp92II CATG 6 cut(s) 331, 337, 364, 922, 1298, 1582
Ksp22I TGATCA 1 cut(s) 112
Kzo9I GATC 6 cut(s) 112, 316, 980, 1367, 1519, 1600
LguI GCTCTTC 1 cut(s) 273
LmnI GCTCC 8 cut(s) 145, 166, 304, 589, 727, 754, 1022, 1070
Lsp1109I GCAGC 8 cut(s) 59, 626, 676, 679, 769, 1133, 1476, 1593
LweI GCATC 6 cut(s) 157, 431, 709, 1426, 1471, 1551
MaeI CTAG 4 cut(s) 771, 870, 1118, 1277
MaeII ACGT 1 cut(s) 63
MaeIII GTNAC 1 cut(s) 1040
MalI GATC 6 cut(s) 114, 318, 982, 1369, 1521, 1602
MboI GATC 6 cut(s) 112, 316, 980, 1367, 1519, 1600
MflI RGATCY 1 cut(s) 980
MhlI GDGCHC 4 cut(s) 143, 163, 171, 586
MlyI GAGTC 6 cut(s) 246, 297, 745, 781, 877, 1571
MmeI TCCRAC 2 cut(s) 213, 1066
Mph1103I ATGCAT 1 cut(s) 1544
MseI TTAA 5 cut(s) 840, 986, 1220, 1418, 1469
MslI CAYNNNNRTG 1 cut(s) 332
MspA1I CMGCKG 3 cut(s) 617, 1148, 1606
MspI CCGG 4 cut(s) 400, 587, 761, 812
MspR9I CCNGG 4 cut(s) 164, 400, 435, 813
MvaI CCWGG 2 cut(s) 164, 435
MvnI CGCG 2 cut(s) 207, 345
MwoI GCNNNNNNNGC 2 cut(s) 56, 679
NciI CCSGG 2 cut(s) 400, 813
NdeI CATATG 1 cut(s) 1426
NdeII GATC 6 cut(s) 112, 316, 980, 1367, 1519, 1600
NlaIII CATG 6 cut(s) 331, 337, 364, 922, 1298, 1582
NlaIV GGNNCC 6 cut(s) 397, 810, 817, 948, 1072, 1274
NruI TCGCGA 1 cut(s) 345
NsiI ATGCAT 1 cut(s) 1544
NspI RCATGY 1 cut(s) 922
PaeR7I CTCGAG 2 cut(s) 285, 1616
PagI TCATGA 2 cut(s) 327, 360
PciI ACATGT 1 cut(s) 918
PciSI GCTCTTC 1 cut(s) 273
PcsI WCGNNNNNNNCGW 1 cut(s) 51
PfeI GAWTC 5 cut(s) 215, 236, 478, 857, 898
PflMI CCANNNNNTGG 1 cut(s) 434
PleI GAGTC 6 cut(s) 246, 296, 744, 781, 877, 1570
PpsI GAGTC 6 cut(s) 246, 296, 744, 781, 877, 1570
PscI ACATGT 1 cut(s) 918
Psp124BI GAGCTC 1 cut(s) 171
Psp6I CCWGG 2 cut(s) 162, 433
PspFI CCCAGC 1 cut(s) 949
PspGI CCWGG 2 cut(s) 162, 433
PspN4I GGNNCC 6 cut(s) 397, 810, 817, 948, 1072, 1274
PspPI GGNCC 4 cut(s) 816, 946, 1088, 1272
PspXI VCTCGAGB 2 cut(s) 285, 1616
PstNI CAGNNNCTG 2 cut(s) 434, 1484
PsuI RGATCY 1 cut(s) 980
PvuII CAGCTG 3 cut(s) 617, 1148, 1606
RruI TCGCGA 1 cut(s) 345
RsaI GTAC 2 cut(s) 12, 1410
RsaNI GTAC 2 cut(s) 11, 1409
RseI CAYNNNNRTG 1 cut(s) 332
SacI GAGCTC 1 cut(s) 171
SapI GCTCTTC 1 cut(s) 273
SaqAI TTAA 5 cut(s) 840, 986, 1220, 1418, 1469
Sau3AI GATC 6 cut(s) 112, 316, 980, 1367, 1519, 1600
Sau96I GGNCC 4 cut(s) 816, 946, 1088, 1272
SchI GAGTC 6 cut(s) 246, 297, 745, 781, 877, 1571
ScrFI CCNGG 4 cut(s) 164, 400, 435, 813
SduI GDGCHC 4 cut(s) 143, 163, 171, 586
SfaNI GCATC 6 cut(s) 157, 431, 709, 1426, 1471, 1551
Sfr274I CTCGAG 2 cut(s) 285, 1616
SinI GGWCC 4 cut(s) 816, 946, 1088, 1272
SlaI CTCGAG 2 cut(s) 285, 1616
SmiMI CAYNNNNRTG 1 cut(s) 332
SmlI CTYRAG 3 cut(s) 285, 1559, 1616
SmoI CTYRAG 3 cut(s) 285, 1559, 1616
SsiI CCGC 5 cut(s) 205, 392, 572, 679, 1574
SspMI CTAG 4 cut(s) 771, 870, 1118, 1277
SstI GAGCTC 1 cut(s) 171
StyD4I CCNGG 4 cut(s) 162, 398, 433, 811
TaaI ACNGT 7 cut(s) 15, 85, 341, 1030, 1272, 1413, 1585
TaiI ACGT 1 cut(s) 66
TauI GCSGC 2 cut(s) 574, 682
TfiI GAWTC 5 cut(s) 215, 236, 478, 857, 898
Tru1I TTAA 5 cut(s) 840, 986, 1220, 1418, 1469
Tru9I TTAA 5 cut(s) 840, 986, 1220, 1418, 1469
TscAI CASTG 4 cut(s) 462, 652, 870, 1133
TseI GCWGC 8 cut(s) 47, 614, 689, 692, 757, 1121, 1464, 1606
TspDTI ATGAA 5 cut(s) 344, 349, 377, 650, 1245
TspGWI ACGGA 2 cut(s) 158, 311
TspRI CASTG 4 cut(s) 462, 652, 870, 1133
Van91I CCANNNNNTGG 1 cut(s) 434
VpaK11BI GGWCC 4 cut(s) 816, 946, 1088, 1272
XagI CCTNNNNNAGG 1 cut(s) 206
XapI RAATTY 2 cut(s) 1057, 1171
XceI RCATGY 1 cut(s) 922
XhoI CTCGAG 2 cut(s) 285, 1616
XspI CTAG 4 cut(s) 771, 870, 1118, 1277
ZraI GACGTC 1 cut(s) 64
Zsp2I ATGCAT 1 cut(s) 1544
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.