Rh7CG477900

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000126
Physical Location & Seq
Reverse (-)
64177208 .. 64180877
3670 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG477900.1

Sequence Viewer

Length: 1890 bp
ATGCTCAGTTGCCAAATGTCAAAAGCTCAGTGGGGGCAGCTGCCCCCACTCGTCCTACTGTGCGTCCGTCCCTGTTCCCAACTCCGTCTCCTTCTTCTCCAATTAATGTCTTCCGTACAGTTAGGGTTTTCAGAGGCGATGGTCGAAGTCGCAGCCACCGAGGCTGACGTCGGCATTGCGTGTCAGACCGTGCAATCCCATCTCTCTTACCTTGTTGATCAAGTGAGCTTGGGGTTGGGGATGAGCACGGAGCATCACGCCCGAGCCCAGGAGCTCGGTTCGAGGGAGGAGAGGCTCAACCAACGCCTCCGCGAGGTTGAATCCAAAGAAAAGCTGTTGGATTCACTCTGCCGAAGACTCGAAAAGAGAGAGAAGAAAATTGAAGAGCCTCGAGTCAAGACGGAGGAGGAGCAGTCGGTGGATCAATCTATCATGAACATGGACTGTCGCGAGTTGCTGGTGTTCATGAACGAACAATTCAGAAGAATTGATTTGGCGGGAACCCGGATGTCGGCTGTTCTTCAAGCATCTCCAGACCCTGGAAAGGTGGTTCTGGAAGCAGTGCGAGGGTTTTATCCTTTGAATCGGAATGTGGATGGAAGAGAGACTGAAATGAGTTCGAGGTGTATGAGAAAGAGTTGTGTTCTGTTGTTGCAGGAGTTGAAGAGAATGTCGCCGCAAATTAGTGCTCCGGTGAGAGAGGAGGCAAAGAAGTTAGCAGCTGAGTGGAAAGCGAAGATGAAGGAGGGCAGTGAGAATAGTTGGGAGGCCAAAGGGCTTTTGCGGCTCATTGCTGCTGCTTATGGTTTGGATGGTATTTGTGATGCTGAGGAGCTTCAGAGTCTTGTTGCTATGGTGGAGCAGCCGGAACAATCTAGTGAACTAAGAAGGACTCTTGGTTTGACAGATGAGGCACCGGGGACCAATACCAATTCTTCGATTGTTAAGATTGAGGGACGAGAATCTTCACTGGCTAGAAATGTAGCGACTCTTTCTTCTCCGAATCATTCTTTACAGGATGACATGTTGATTTCTCTTCGATTGTCATCGGACCCAGCAAAGCTTGTGTTGAAATTGATAAAAAGATCTTTAAGCCAATACTGGACAAATGGTGATGTTAGCTCCAAAGAAACAGTTGTATCGAGTAACATTTCTCTGTTGAATTTTCTAATGGGAGCCTCAGCGTGTGTTGGACCTCATCTGAAAGATGGTGCAACAAATCTAGCAGCCCAGTGGAAAGCAAATATGACAGCTGATACTGAAAACTCATTGGAGAATTTGGGATTTTCGCTGTTTATAGCTATATATGGATTGCTTTCTACTTTAAACGAAGATGAAATTGTAAGGCTTCTTGGGAGGATTTCACAGCATAAACGGTCCCTAGAATTATGTCAGACACATGGTTTTGCATATAAGATTGCTGGTCTTATTGGGAAACTTATTGAAAAGAAGCAAGTGATTGACGCTGTTAGATCGATTTGTTTGTTCAAGTTGATTGACAAGTTTCCCCCAGTACCGTTGTTAAAAGCATATGTGCAGGATGCAAAGGAGTGGTCTGAATTAGTTTGCAGCTTAAAGATATCAGATGCTGAAAAGGAGAAGGCTGTAAATGGAAAAATAGCTGATCTTAGAGCTGTCATTCAATGCATCAAAGATTGCAACCTTGAGTCTGAATACCCGCCCATGACTGTTGAAATGCAAATAGATCAGCTGCAAATACTCGAGGAGAATTGGAGACCATCTTGTGTCTCCAAAGTTAGACAACAAGAGAGAAAAAGGAAGAGACCTAATATCAGCTGTGTGTGCATATTAGCTGAGAGAGTCAAGCTTCCCATTTTAAATCATCATGGTAACTTTCTGAAGCATAATTTGGGCCCAGATCTTCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida TEX13

Protein Analysis

629

Amino Acids

70.39

Weight (kDa)

7.46

Isoelectric Point (pI)

53.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 136 - 306 4.2e-32 Frigida-like protein
Frigida PF07899 324 - 572 2.5e-52 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 171
AccB1I GGYRCC 1 cut(s) 913
AccB7I CCANNNNNTGG 1 cut(s) 539
AccII CGCG 2 cut(s) 312, 450
AciI CCGC 5 cut(s) 310, 497, 677, 784, 1679
AclWI GGATC 1 cut(s) 429
AcsI RAATTY 2 cut(s) 1162, 1276
AcuI CTGAAG 2 cut(s) 821, 1880
AcyI GRCGYC 1 cut(s) 168
AfaI GTAC 2 cut(s) 117, 1515
AfiI CCNNNNNNNGG 5 cut(s) 268, 313, 511, 539, 544
AflIII ACRYGT 1 cut(s) 1023
AjnI CCWGG 2 cut(s) 267, 538
AjuI GAANNNNNNNTTGG 2 cut(s) 1853, 1885
AloI GAACNNNNNNTCC 2 cut(s) 534, 566
Alw21I GWGCWC 3 cut(s) 248, 276, 691
Alw26I GTCTC 5 cut(s) 92, 599, 1729, 1753, 1777
AlwI GGATC 1 cut(s) 429
AlwNI CAGNNNCTG 2 cut(s) 539, 1589
Ama87I CYCGRG 3 cut(s) 261, 390, 1721
AoxI GGCC 2 cut(s) 768, 1873
ApaI GGGCCC 1 cut(s) 1877
ApoI RAATTY 2 cut(s) 1162, 1276
ArsI GACNNNNNNTTYG 4 cut(s) 883, 915, 1538, 1570
AseI ATTAAT 1 cut(s) 104
AspS9I GGNCC 6 cut(s) 921, 1051, 1193, 1377, 1873, 1874
AsuC2I CCSGG 2 cut(s) 505, 918
AsuHPI GGTGA 2 cut(s) 706, 1124
AvaI CYCGRG 3 cut(s) 261, 390, 1721
AvaII GGWCC 4 cut(s) 921, 1051, 1193, 1377
BaeGI GKGCMC 1 cut(s) 1877
BaeI ACNNNNGTAYC 2 cut(s) 1122, 1155
BanI GGYRCC 1 cut(s) 913
BanII GRGCYC 3 cut(s) 268, 276, 1877
BbsI GAAGAC 2 cut(s) 102, 361
Bbv12I GWGCWC 3 cut(s) 248, 276, 691
BbvCI CCTCAGC 2 cut(s) 828, 1180
BccI CCATC 6 cut(s) 133, 207, 590, 806, 1202, 1747
BciT130I CCWGG 2 cut(s) 269, 540
BclI TGATCA 1 cut(s) 217
BcnI CCSGG 2 cut(s) 505, 918
BcoDI GTCTC 5 cut(s) 92, 599, 1729, 1753, 1777
BfaI CTAG 4 cut(s) 876, 975, 1223, 1382
BglI GCCNNNNNGGC 1 cut(s) 161
BglII AGATCT 2 cut(s) 1085, 1879
Bme1390I CCNGG 4 cut(s) 269, 505, 540, 918
Bme18I GGWCC 4 cut(s) 921, 1051, 1193, 1377
BmeT110I CYCGRG 3 cut(s) 261, 390, 1721
BmgT120I GGNCC 6 cut(s) 921, 1051, 1193, 1377, 1873, 1874
BmiI GGNNCC 7 cut(s) 502, 915, 922, 1053, 1177, 1379, 1875
BmrFI CCNGG 4 cut(s) 269, 505, 540, 918
BmrI ACTGGG 2 cut(s) 1225, 1505
BmsI GCATC 6 cut(s) 262, 536, 814, 1531, 1576, 1656
BmuI ACTGGG 2 cut(s) 1225, 1505
BpiI GAAGAC 2 cut(s) 102, 361
BpmI CTGGAG 1 cut(s) 516
Bpu10I CCTNAGC 2 cut(s) 828, 1180
BpuEI CTTGAG 1 cut(s) 1685
BpuMI CCSGG 2 cut(s) 505, 918
Bsa29I ATCGAT 1 cut(s) 1475
BsaBI GATNNNNATC 1 cut(s) 1045
BsaHI GRCGYC 1 cut(s) 168
BsaI GGTCTC 2 cut(s) 1729, 1777
BsaJI CCNNGG 4 cut(s) 159, 267, 538, 917
BsaWI WCCGGW 1 cut(s) 691
BsaXI ACNNNNNCTCC 4 cut(s) 72, 102, 398, 428
Bsc4I CCNNNNNNNGG 5 cut(s) 268, 313, 511, 539, 544
Bse1I ACTGG 4 cut(s) 975, 1106, 1231, 1511
Bse3DI GCAATG 2 cut(s) 174, 789
Bse8I GATNNNNATC 1 cut(s) 1045
BseBI CCWGG 2 cut(s) 269, 540
BseCI ATCGAT 1 cut(s) 1475
BseDI CCNNGG 4 cut(s) 159, 267, 538, 917
BseGI GGATG 6 cut(s) 246, 513, 601, 817, 1024, 1546
BseJI GATNNNNATC 1 cut(s) 1045
BseLI CCNNNNNNNGG 5 cut(s) 268, 313, 511, 539, 544
BseMI GCAATG 2 cut(s) 174, 789
BseMII CTCAG 6 cut(s) 19, 41, 714, 819, 1194, 1806
BseNI ACTGG 4 cut(s) 975, 1106, 1231, 1511
BseRI GAGGAG 6 cut(s) 302, 419, 422, 716, 845, 1739
BseSI GKGCMC 1 cut(s) 1877
BseYI CCCAGC 1 cut(s) 1054
BsgI GTGCAG 1 cut(s) 1556
Bsh1236I CGCG 2 cut(s) 312, 450
BshFI GGCC 2 cut(s) 770, 1875
BshNI GGYRCC 1 cut(s) 913
BshVI ATCGAT 1 cut(s) 1475
BsiHKAI GWGCWC 3 cut(s) 248, 276, 691
BsiHKCI CYCGRG 3 cut(s) 261, 390, 1721
BsiSI CCGG 4 cut(s) 505, 692, 866, 917
BslFI GGGAC 4 cut(s) 54, 934, 969, 1363
BslI CCNNNNNNNGG 5 cut(s) 268, 313, 511, 539, 544
BsmAI GTCTC 5 cut(s) 92, 599, 1729, 1753, 1777
BsmBI CGTCTC 1 cut(s) 92
BsmFI GGGAC 4 cut(s) 54, 934, 969, 1363
BsnI GGCC 2 cut(s) 770, 1875
Bso31I GGTCTC 2 cut(s) 1729, 1777
BsoBI CYCGRG 3 cut(s) 261, 390, 1721
Bsp120I GGGCCC 1 cut(s) 1873
Bsp1286I GDGCHC 5 cut(s) 248, 268, 276, 691, 1877
Bsp143I GATC 7 cut(s) 217, 421, 1085, 1472, 1624, 1705, 1879
Bsp68I TCGCGA 1 cut(s) 450
BspACI CCGC 5 cut(s) 310, 497, 677, 784, 1679
BspANI GGCC 2 cut(s) 770, 1875
BspCNI CTCAG 6 cut(s) 18, 40, 715, 820, 1193, 1807
BspDI ATCGAT 1 cut(s) 1475
BspFNI CGCG 2 cut(s) 312, 450
BspHI TCATGA 2 cut(s) 432, 465
BspLI GGNNCC 7 cut(s) 502, 915, 922, 1053, 1177, 1379, 1875
BspPI GGATC 1 cut(s) 429
BspQI GCTCTTC 1 cut(s) 378
BspT107I GGYRCC 1 cut(s) 913
BspTNI GGTCTC 2 cut(s) 1729, 1777
BsrDI GCAATG 2 cut(s) 174, 789
BsrI ACTGG 4 cut(s) 975, 1106, 1231, 1511
BssECI CCNNGG 4 cut(s) 159, 267, 538, 917
BssMI GATC 7 cut(s) 217, 421, 1085, 1472, 1624, 1705, 1879
BssNI GRCGYC 1 cut(s) 168
Bst2UI CCWGG 2 cut(s) 269, 540
Bst4CI ACNGT 8 cut(s) 60, 120, 190, 446, 1135, 1377, 1518, 1690
Bst6I CTCTTC 5 cut(s) 378, 595, 659, 1041, 1775
BstACI GRCGYC 1 cut(s) 168
BstDEI CTNAG 8 cut(s) 5, 27, 723, 828, 884, 1180, 1628, 1815
BstENI CCTNNNNNAGG 1 cut(s) 311
BstF5I GGATG 6 cut(s) 246, 513, 601, 817, 1024, 1546
BstFNI CGCG 2 cut(s) 312, 450
BstKTI GATC 7 cut(s) 220, 424, 1088, 1475, 1627, 1708, 1882
BstMAI GTCTC 5 cut(s) 92, 599, 1729, 1753, 1777
BstMBI GATC 7 cut(s) 217, 421, 1085, 1472, 1624, 1705, 1879
BstMWI GCNNNNNNNGC 3 cut(s) 161, 784, 1803
BstNI CCWGG 2 cut(s) 269, 540
BstNSI RCATGY 1 cut(s) 1027
BstSCI CCNGG 4 cut(s) 267, 503, 538, 916
BstSLI GKGCMC 1 cut(s) 1877
BstUI CGCG 2 cut(s) 312, 450
BstV2I GAAGAC 2 cut(s) 102, 361
BstX2I RGATCY 2 cut(s) 1085, 1879
BstYI RGATCY 2 cut(s) 1085, 1879
Bsu15I ATCGAT 1 cut(s) 1475
BsuRI GGCC 2 cut(s) 770, 1875
BsuTUI ATCGAT 1 cut(s) 1475
BtgZI GCGATG 1 cut(s) 152
BtsCI GGATG 6 cut(s) 246, 513, 601, 817, 1024, 1546
BtsI GCAGTG 2 cut(s) 567, 757
BtsIMutI CAGTG 5 cut(s) 35, 567, 757, 968, 1238
BtuMI TCGCGA 1 cut(s) 450
CaiI CAGNNNCTG 2 cut(s) 539, 1589
CciI TCATGA 2 cut(s) 432, 465
Cfr13I GGNCC 6 cut(s) 921, 1051, 1193, 1377, 1873, 1874
ClaI ATCGAT 1 cut(s) 1475
CseI GACGC 2 cut(s) 52, 1472
Csp6I GTAC 2 cut(s) 116, 1514
CviAII CATG 7 cut(s) 433, 439, 466, 1024, 1400, 1684, 1847
CviQI GTAC 2 cut(s) 116, 1514
DdeI CTNAG 8 cut(s) 5, 27, 723, 828, 884, 1180, 1628, 1815
DpnI GATC 7 cut(s) 219, 423, 1087, 1474, 1626, 1707, 1881
DpnII GATC 7 cut(s) 217, 421, 1085, 1472, 1624, 1705, 1879
DraI TTTAAA 2 cut(s) 1326, 1839
Eam1104I CTCTTC 5 cut(s) 378, 595, 659, 1041, 1775
EarI CTCTTC 5 cut(s) 378, 595, 659, 1041, 1775
Ecl136II GAGCTC 1 cut(s) 274
Eco24I GRGCYC 3 cut(s) 268, 276, 1877
Eco31I GGTCTC 2 cut(s) 1729, 1777
Eco32I GATATC 1 cut(s) 1581
Eco47I GGWCC 4 cut(s) 921, 1051, 1193, 1377
Eco53kI GAGCTC 1 cut(s) 274
Eco57I CTGAAG 2 cut(s) 821, 1880
Eco88I CYCGRG 3 cut(s) 261, 390, 1721
EcoICRI GAGCTC 1 cut(s) 274
EcoNI CCTNNNNNAGG 1 cut(s) 311
EcoRII CCWGG 2 cut(s) 267, 538
EcoRV GATATC 1 cut(s) 1581
EcoT22I ATGCAT 1 cut(s) 1649
EcoT38I GRGCYC 3 cut(s) 268, 276, 1877
Esp3I CGTCTC 1 cut(s) 92
FaeI CATG 7 cut(s) 436, 442, 469, 1027, 1403, 1687, 1850
FaqI GGGAC 4 cut(s) 54, 934, 969, 1363
FatI CATG 7 cut(s) 432, 438, 465, 1023, 1399, 1683, 1846
FauI CCCGC 2 cut(s) 490, 1686
FauNDI CATATG 1 cut(s) 1531
FbaI TGATCA 1 cut(s) 217
FokI GGATG 6 cut(s) 253, 520, 608, 824, 1031, 1553
FriOI GRGCYC 3 cut(s) 268, 276, 1877
FspBI CTAG 4 cut(s) 876, 975, 1223, 1382
GsaI CCCAGC 1 cut(s) 1058
GsuI CTGGAG 1 cut(s) 516
HaeIII GGCC 2 cut(s) 770, 1875
HapII CCGG 4 cut(s) 505, 692, 866, 917
HgaI GACGC 2 cut(s) 52, 1472
Hin1I GRCGYC 1 cut(s) 168
Hin1II CATG 7 cut(s) 436, 442, 469, 1027, 1403, 1687, 1850
HindIII AAGCTT 2 cut(s) 1061, 1826
HpaII CCGG 4 cut(s) 505, 692, 866, 917
HphI GGTGA 2 cut(s) 706, 1124
Hpy166II GTNNAC 1 cut(s) 881
Hpy188III TCNNGA 6 cut(s) 397, 433, 449, 466, 533, 554
Hpy8I GTNNAC 1 cut(s) 881
Hpy99I CGWCG 1 cut(s) 173
HpyAV CCTTC 4 cut(s) 101, 736, 882, 1594
HpyCH4III ACNGT 8 cut(s) 60, 120, 190, 446, 1135, 1377, 1518, 1690
HpyCH4IV ACGT 1 cut(s) 168
HpyF10VI GCNNNNNNNGC 3 cut(s) 161, 784, 1803
HpyF3I CTNAG 8 cut(s) 5, 27, 723, 828, 884, 1180, 1628, 1815
HpySE526I ACGT 1 cut(s) 168
Hsp92I GRCGYC 1 cut(s) 168
Hsp92II CATG 7 cut(s) 436, 442, 469, 1027, 1403, 1687, 1850
Ksp22I TGATCA 1 cut(s) 217
Kzo9I GATC 7 cut(s) 217, 421, 1085, 1472, 1624, 1705, 1879
LguI GCTCTTC 1 cut(s) 378
LmnI GCTCC 8 cut(s) 250, 271, 409, 694, 832, 859, 1127, 1175
LweI GCATC 6 cut(s) 262, 536, 814, 1531, 1576, 1656
MaeI CTAG 4 cut(s) 876, 975, 1223, 1382
MaeII ACGT 1 cut(s) 168
MaeIII GTNAC 2 cut(s) 1145, 1850
MalI GATC 7 cut(s) 219, 423, 1087, 1474, 1626, 1707, 1881
MboI GATC 7 cut(s) 217, 421, 1085, 1472, 1624, 1705, 1879
MflI RGATCY 2 cut(s) 1085, 1879
MhlI GDGCHC 5 cut(s) 248, 268, 276, 691, 1877
MlyI GAGTC 7 cut(s) 351, 402, 850, 886, 982, 1676, 1830
MmeI TCCRAC 2 cut(s) 318, 1171
Mph1103I ATGCAT 1 cut(s) 1649
MseI TTAA 8 cut(s) 104, 945, 1091, 1325, 1523, 1574, 1838, 1888
MslI CAYNNNNRTG 1 cut(s) 437
MspA1I CMGCKG 5 cut(s) 40, 722, 1253, 1711, 1797
MspI CCGG 4 cut(s) 505, 692, 866, 917
MspR9I CCNGG 4 cut(s) 269, 505, 540, 918
MvaI CCWGG 2 cut(s) 269, 540
MvnI CGCG 2 cut(s) 312, 450
MwoI GCNNNNNNNGC 3 cut(s) 161, 784, 1803
NciI CCSGG 2 cut(s) 505, 918
NdeI CATATG 1 cut(s) 1531
NdeII GATC 7 cut(s) 217, 421, 1085, 1472, 1624, 1705, 1879
NlaIII CATG 7 cut(s) 436, 442, 469, 1027, 1403, 1687, 1850
NlaIV GGNNCC 7 cut(s) 502, 915, 922, 1053, 1177, 1379, 1875
NruI TCGCGA 1 cut(s) 450
NsiI ATGCAT 1 cut(s) 1649
NspI RCATGY 1 cut(s) 1027
PaeR7I CTCGAG 2 cut(s) 390, 1721
PagI TCATGA 2 cut(s) 432, 465
PciI ACATGT 1 cut(s) 1023
PciSI GCTCTTC 1 cut(s) 378
PcsI WCGNNNNNNNCGW 1 cut(s) 156
PfeI GAWTC 5 cut(s) 320, 341, 583, 962, 1003
PflMI CCANNNNNTGG 1 cut(s) 539
PleI GAGTC 7 cut(s) 351, 401, 849, 886, 982, 1675, 1829
PpsI GAGTC 7 cut(s) 351, 401, 849, 886, 982, 1675, 1829
PscI ACATGT 1 cut(s) 1023
PshBI ATTAAT 1 cut(s) 104
Psp124BI GAGCTC 1 cut(s) 276
Psp6I CCWGG 2 cut(s) 267, 538
PspFI CCCAGC 1 cut(s) 1054
PspGI CCWGG 2 cut(s) 267, 538
PspN4I GGNNCC 7 cut(s) 502, 915, 922, 1053, 1177, 1379, 1875
PspOMI GGGCCC 1 cut(s) 1873
PspPI GGNCC 6 cut(s) 921, 1051, 1193, 1377, 1873, 1874
PspXI VCTCGAGB 2 cut(s) 390, 1721
PstNI CAGNNNCTG 2 cut(s) 539, 1589
PsuI RGATCY 2 cut(s) 1085, 1879
PvuII CAGCTG 5 cut(s) 40, 722, 1253, 1711, 1797
RruI TCGCGA 1 cut(s) 450
RsaI GTAC 2 cut(s) 117, 1515
RsaNI GTAC 2 cut(s) 116, 1514
RseI CAYNNNNRTG 1 cut(s) 437
SacI GAGCTC 1 cut(s) 276
SapI GCTCTTC 1 cut(s) 378
SaqAI TTAA 8 cut(s) 104, 945, 1091, 1325, 1523, 1574, 1838, 1888
Sau3AI GATC 7 cut(s) 217, 421, 1085, 1472, 1624, 1705, 1879
Sau96I GGNCC 6 cut(s) 921, 1051, 1193, 1377, 1873, 1874
SchI GAGTC 7 cut(s) 351, 402, 850, 886, 982, 1676, 1830
ScrFI CCNGG 4 cut(s) 269, 505, 540, 918
SduI GDGCHC 5 cut(s) 248, 268, 276, 691, 1877
SfaNI GCATC 6 cut(s) 262, 536, 814, 1531, 1576, 1656
Sfr274I CTCGAG 2 cut(s) 390, 1721
SinI GGWCC 4 cut(s) 921, 1051, 1193, 1377
SlaI CTCGAG 2 cut(s) 390, 1721
SmiMI CAYNNNNRTG 1 cut(s) 437
SmlI CTYRAG 3 cut(s) 390, 1664, 1721
SmoI CTYRAG 3 cut(s) 390, 1664, 1721
SsiI CCGC 5 cut(s) 310, 497, 677, 784, 1679
SspMI CTAG 4 cut(s) 876, 975, 1223, 1382
SstI GAGCTC 1 cut(s) 276
StyD4I CCNGG 4 cut(s) 267, 503, 538, 916
TaaI ACNGT 8 cut(s) 60, 120, 190, 446, 1135, 1377, 1518, 1690
TaiI ACGT 1 cut(s) 171
TauI GCSGC 2 cut(s) 679, 787
TfiI GAWTC 5 cut(s) 320, 341, 583, 962, 1003
Tru1I TTAA 8 cut(s) 104, 945, 1091, 1325, 1523, 1574, 1838, 1888
Tru9I TTAA 8 cut(s) 104, 945, 1091, 1325, 1523, 1574, 1838, 1888
TscAI CASTG 5 cut(s) 35, 567, 757, 975, 1238
TspDTI ATGAA 5 cut(s) 449, 454, 482, 755, 1350
TspGWI ACGGA 5 cut(s) 56, 74, 103, 263, 416
TspRI CASTG 5 cut(s) 35, 567, 757, 975, 1238
Van91I CCANNNNNTGG 1 cut(s) 539
VpaK11BI GGWCC 4 cut(s) 921, 1051, 1193, 1377
VspI ATTAAT 1 cut(s) 104
XagI CCTNNNNNAGG 1 cut(s) 311
XapI RAATTY 2 cut(s) 1162, 1276
XceI RCATGY 1 cut(s) 1027
XhoI CTCGAG 2 cut(s) 390, 1721
XspI CTAG 4 cut(s) 876, 975, 1223, 1382
ZraI GACGTC 1 cut(s) 169
Zsp2I ATGCAT 1 cut(s) 1649
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.