pycom03g04860

FRIGIDA-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
OG0000126
Physical Location & Seq
Forward (+)
3793751 .. 3796263
2513 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g04860.3

Sequence Viewer

Length: 2397 bp
ATGAATAACATTAATATAAATTATTGTGGTAACGTATGGAAACACACGGAATTCCACACCGCACTCTATTTCCTTGAGGAAACGAGACTGCAGTTCGCTACGCTTGACTATCGCTCTACTCTTCCCACTAACTCTAGGGATTTTGATCAGGCGGTTCCTCACCGCAACGACGCCGGTTTTAGTACGGTTTATGCAGAAGCGGCGGCGGCGGCGGAAGAGACGATGGAGAAGCTAGAATTGGAAGTGAAAGAATCGGAGTTGAAGCAGAAGACTCTGCGCCAGGCGTACGACTGCGTGCAGGCCCAAGCCAAGTCCCTGACGTTCTTTTCCGTGCAGTGGAAGGACCTCGAGGACCACCTGGAGTCCACGCGCCACTCCGTCGAGGCCCGGTTCCGGGAACTCGAGCACCGCGAGGAGGAAGTCCGAGGCCGCGAGGAGGATTTGGATGCCAGAGAGTCGAATTTCCGCTCGGAGATGGAGGCGAAATCCAACGAATTGCTAGTGCTTCAGAAGTTGATCGAAGCGAGGAAGGACCAGTTGCTGTCGCTCCAGTCGTTGATTCAAGATCACAGCGAAGAGGTTGCTGTTCAGGAGCGGCGGTTGACGGAGGTGGAGGGTTTCGTGAGGGAGAAGGAGGGGGAGTGTGATTTCATGGAGAGGCGCATTGGAGAGAGGACGAGAAAATTGAGTTGGGTGGAGGCGAAGGTGAAACAGGCGGAGGCTAAGGAGCGGGAAGCGGTGGAGGGGTTTGAAGAATTGCTGGACAAGTGCAATGAGGGCATTGAATTGAAAGAGAGGGAGTTGAGAGAGGTTCTGAGGTCGCTCGAGGCGCGAAAGGCGGAGTTTGATTCGAGAGGGGAGGAGCTGGAATCAGCGCGAAGGTCGATTGAGGAATGTGAGAGGGAGCTGAAGGCGAAAGAGGAGGAACTCGAATCGAGGGAAGGAATGATTAGGGAAATGGATTTGAAAGAGAGTGATTTGAGTTTGCTTGAGAATGCACTGGAGGAGTGGAGTAGTGAGCTTCAATTGAGAGAGAAGGAGCTCGAAAAATCGAAGCAAGAAGGCGAAAAGTATTTGGATAAAGTCTCCAGGGGACTTCAAGAGAAAGAGATCCAACTGCAAAGGAAGGAGAGCTTACTGCAGAGGAAAGAGAGCCAACTTCAGCAGCAGGCCAGAGAGCTCGCATTGAATCAGCAGGACTTGATCAAGAAAATCATAGAAGAACACACCGAAACTCTGAAGTCGAAAGAGGGGCAAATCGAAGATCAGGCGAAAGAGATCGAGTTGAAGCAGAAAGAGGTTGATTCGATAAAAAAATCCGCTGAAGAACAAACCCAAAACCTGAAACCGAAAGAGAGGCAACTGGAAGACAAGGCCAAGGAGCTTGAGTTGAAGCAGACGGTCTGCGATTCGATCCAAAAATCCAACGAAGAACGCGCCCAATGCCTAAGATCGATACAGAGGCAACTTGATCACCGCTCGAAAGAGCTGGCATTGAAGCATAAGGGATTGGAATCAATAAAAAAATCCACCGAAGAACGCACCGAAAACCTGGAATCGAAAGAGAGGCAACTCGGAGACAAGGCCAAAGAGCTTGAACTGAAGCAGAAGGAAATTGATTCAATGAAAAAATCCGCTGAAGAACAAGCCGAAAGCCTGAAATCAAAAGAGAGGCAGCTCGAAGAGCAGGCGACAGAGCTTGCACTGAAGCAGAAAGAGTTGGATTCGATCAAAAGGGCAACTGAAGATCGCACCGAAACCTTGAATTCGAAAGAGAGGGAACTCGATCAGCAGGCGAAAGAGCTTGCACTGAAGCAGAAAGAATTGGATTCGATCAAAAAGGCGATTGAAGATCGCAACCAAACCTTGAATTCGAAAGAAAAGGAACTCGATCACCAGGGGAAAGAGCTTGAAGTGAAGCAGAAAGAATTGGACTCGATCAAAGAATTGGAACCTGTCCTTGACAGCAATGCAGCCGTTCATTCTTCCGCAAGTAATGAATCCAGCGTCGATTGGAATGGTAGAGGTGAGAAACGCAGTACCGCCACGTTTGACTCCGGGTTCCAGCCGCCGCAACAACGCGAAAATAAGTATCCTCGGACATCGGAACCAGCTGTTCCACCCAAGTCAGTGCCAACTTACAACACAGGCTATCATCCGCCATATGAATCAGCCGTGACACACTATCAAGTCCCAAATTACACCCCAGTAGGCTACCCGCAGCCAGGTCCGCCGCCGCCACCTTGGCATTACGAAAATGGGCACTTTGGGCAGTTTGGTATGACTAATTTTGGTCCAAATACGGGAATGCATTACCGGCCGCCATACTTTCCCGGCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCCCCCTAGATATGTTGGTCCTTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida

Protein Analysis

799

Amino Acids

92.64

Weight (kDa)

5.22

Isoelectric Point (pI)

59.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 347
AccBSI CCGCTC 4 cut(s) 468, 595, 730, 1479
AccII CGCG 7 cut(s) 370, 411, 432, 832, 877, 1437, 2082
AclWI GGATC 2 cut(s) 1105, 1408
AcoI YGGCCR 1 cut(s) 2318
AcsI RAATTY 4 cut(s) 50, 460, 1765, 1870
AcyI GRCGYC 1 cut(s) 171
AfaI GTAC 3 cut(s) 184, 287, 2041
AfiI CCNNNNNNNGG 7 cut(s) 336, 393, 394, 415, 436, 2225, 2303
AjnI CCWGG 6 cut(s) 279, 357, 1088, 1551, 1896, 2224
AjuI GAANNNNNNNTTGG 4 cut(s) 221, 253, 673, 705
Alw21I GWGCWC 3 cut(s) 408, 1044, 1182
Alw26I GTCTC 4 cut(s) 79, 212, 1090, 1572
AlwI GGATC 2 cut(s) 1105, 1408
AlwNI CAGNNNCTG 1 cut(s) 541
Ama87I CYCGRG 3 cut(s) 347, 401, 824
AoxI GGCC 8 cut(s) 300, 384, 427, 1170, 1374, 1584, 2318, 2335
ApeKI GCWGC 4 cut(s) 1165, 1675, 1973, 2221
ApoI RAATTY 4 cut(s) 50, 460, 1765, 1870
AseI ATTAAT 1 cut(s) 12
AspLEI GCGC 6 cut(s) 279, 372, 663, 832, 877, 1439
AspS9I GGNCC 9 cut(s) 301, 343, 352, 385, 532, 2228, 2294, 2336, 2387
AsuC2I CCSGG 4 cut(s) 388, 395, 2059, 2334
AsuHPI GGTGA 5 cut(s) 152, 718, 1466, 1886, 2039
AsuII TTCGAA 2 cut(s) 1769, 1874
AvaI CYCGRG 3 cut(s) 347, 401, 824
AvaII GGWCC 6 cut(s) 343, 352, 532, 2228, 2294, 2387
BaeGI GKGCMC 1 cut(s) 2265
BanII GRGCYC 2 cut(s) 1044, 1182
BbsI GAAGAC 2 cut(s) 275, 1374
Bbv12I GWGCWC 3 cut(s) 408, 1044, 1182
BbvI GCAGC 4 cut(s) 1177, 1687, 1985, 2233
BccI CCATC 2 cut(s) 217, 469
BceAI ACGGC 2 cut(s) 1961, 2159
BcgI CGANNNNNNTGC 2 cut(s) 563, 597
BciT130I CCWGG 6 cut(s) 281, 359, 1090, 1553, 1898, 2226
BciVI GTATCC 1 cut(s) 2103
BclI TGATCA 3 cut(s) 145, 1203, 1471
BcnI CCSGG 4 cut(s) 388, 395, 2059, 2334
BcoDI GTCTC 4 cut(s) 79, 212, 1090, 1572
BfaI CTAG 4 cut(s) 135, 233, 500, 2376
BfmI CTRYAG 2 cut(s) 89, 1139
BfuI GTATCC 1 cut(s) 2103
BglI GCCNNNNNGGC 1 cut(s) 2245
Bme18I GGWCC 6 cut(s) 343, 352, 532, 2228, 2294, 2387
BmeT110I CYCGRG 3 cut(s) 347, 401, 824
BmgT120I GGNCC 9 cut(s) 301, 343, 352, 385, 532, 2228, 2294, 2336, 2387
BmiI GGNNCC 5 cut(s) 156, 392, 1953, 2063, 2109
BmrI ACTGGG 1 cut(s) 2201
BmsI GCATC 1 cut(s) 436
BmuI ACTGGG 1 cut(s) 2201
BpiI GAAGAC 2 cut(s) 275, 1374
BpmI CTGGAG 4 cut(s) 380, 533, 1022, 1072
Bpu10I CCTNAGC 1 cut(s) 723
Bpu14I TTCGAA 2 cut(s) 1769, 1874
BpuEI CTTGAG 3 cut(s) 95, 1010, 1406
BpuMI CCSGG 4 cut(s) 388, 395, 2059, 2334
Bsa29I ATCGAT 1 cut(s) 1454
BsaBI GATNNNNATC 2 cut(s) 144, 1513
BsaHI GRCGYC 1 cut(s) 171
BsaJI CCNNGG 6 cut(s) 424, 1089, 1377, 1897, 2096, 2243
BsaXI ACNNNNNCTCC 6 cut(s) 584, 614, 626, 656, 1373, 1403
Bsc4I CCNNNNNNNGG 7 cut(s) 336, 393, 394, 415, 436, 2225, 2303
Bse118I RCCGGY 2 cut(s) 173, 2316
Bse1I ACTGG 5 cut(s) 535, 550, 1005, 1368, 2207
Bse3DI GCAATG 2 cut(s) 778, 1975
Bse8I GATNNNNATC 2 cut(s) 144, 1513
BseBI CCWGG 6 cut(s) 281, 359, 1090, 1553, 1898, 2226
BseCI ATCGAT 1 cut(s) 1454
BseDI CCNNGG 6 cut(s) 424, 1089, 1377, 1897, 2096, 2243
BseGI GGATG 2 cut(s) 451, 2155
BseJI GATNNNNATC 2 cut(s) 144, 1513
BseLI CCNNNNNNNGG 7 cut(s) 336, 393, 394, 415, 436, 2225, 2303
BseMI GCAATG 2 cut(s) 778, 1975
BseMII CTCAG 1 cut(s) 806
BseNI ACTGG 5 cut(s) 535, 550, 1005, 1368, 2207
BseSI GKGCMC 1 cut(s) 2265
BseX3I CGGCCG 1 cut(s) 2318
BseXI GCAGC 4 cut(s) 1177, 1687, 1985, 2233
BsgI GTGCAG 2 cut(s) 317, 353
Bsh1236I CGCG 7 cut(s) 370, 411, 432, 832, 877, 1437, 2082
Bsh1285I CGRYCG 1 cut(s) 2321
BshFI GGCC 8 cut(s) 302, 386, 429, 1172, 1376, 1586, 2320, 2337
BshVI ATCGAT 1 cut(s) 1454
BsiEI CGRYCG 1 cut(s) 2321
BsiHKAI GWGCWC 3 cut(s) 408, 1044, 1182
BsiHKCI CYCGRG 3 cut(s) 347, 401, 824
BsiSI CCGG 6 cut(s) 174, 388, 394, 2058, 2317, 2334
BsiWI CGTACG 1 cut(s) 285
BslFI GGGAC 3 cut(s) 298, 1107, 2177
BslI CCNNNNNNNGG 7 cut(s) 336, 393, 394, 415, 436, 2225, 2303
BsmAI GTCTC 4 cut(s) 79, 212, 1090, 1572
BsmBI CGTCTC 1 cut(s) 212
BsmFI GGGAC 3 cut(s) 298, 1107, 2177
BsmI GAATGC 2 cut(s) 1000, 2313
BsnI GGCC 8 cut(s) 302, 386, 429, 1172, 1376, 1586, 2320, 2337
BsoBI CYCGRG 3 cut(s) 347, 401, 824
Bsp119I TTCGAA 2 cut(s) 1769, 1874
Bsp1286I GDGCHC 4 cut(s) 408, 1044, 1182, 2265
BspANI GGCC 8 cut(s) 302, 386, 429, 1172, 1376, 1586, 2320, 2337
BspCNI CTCAG 1 cut(s) 807
BspDI ATCGAT 1 cut(s) 1454
BspFNI CGCG 7 cut(s) 370, 411, 432, 832, 877, 1437, 2082
BspLI GGNNCC 5 cut(s) 156, 392, 1953, 2063, 2109
BspMAI CTGCAG 2 cut(s) 93, 1143
BspPI GGATC 2 cut(s) 1105, 1408
BspQI GCTCTTC 1 cut(s) 1677
BspT104I TTCGAA 2 cut(s) 1769, 1874
BsrBI CCGCTC 4 cut(s) 468, 595, 730, 1479
BsrDI GCAATG 2 cut(s) 778, 1975
BsrFI RCCGGY 2 cut(s) 173, 2316
BsrI ACTGG 5 cut(s) 535, 550, 1005, 1368, 2207
BssAI RCCGGY 2 cut(s) 173, 2316
BssECI CCNNGG 6 cut(s) 424, 1089, 1377, 1897, 2096, 2243
BssNI GRCGYC 1 cut(s) 171
BssT1I CCWWGG 2 cut(s) 1377, 2243
Bst2UI CCWGG 6 cut(s) 281, 359, 1090, 1553, 1898, 2226
Bst4CI ACNGT 2 cut(s) 187, 1402
Bst6I CTCTTC 4 cut(s) 126, 210, 570, 1677
BstACI GRCGYC 1 cut(s) 171
BstBI TTCGAA 2 cut(s) 1769, 1874
BstC8I GCNNGC 9 cut(s) 296, 300, 1170, 1182, 1491, 1689, 1701, 1794, 1806
BstDEI CTNAG 3 cut(s) 723, 815, 1448
BstF5I GGATG 2 cut(s) 451, 2155
BstFNI CGCG 7 cut(s) 370, 411, 432, 832, 877, 1437, 2082
BstHHI GCGC 6 cut(s) 279, 372, 663, 832, 877, 1439
BstMAI GTCTC 4 cut(s) 79, 212, 1090, 1572
BstMCI CGRYCG 1 cut(s) 2321
BstNI CCWGG 6 cut(s) 281, 359, 1090, 1553, 1898, 2226
BstSFI CTRYAG 2 cut(s) 89, 1139
BstSLI GKGCMC 1 cut(s) 2265
BstUI CGCG 7 cut(s) 370, 411, 432, 832, 877, 1437, 2082
BstV1I GCAGC 4 cut(s) 1177, 1687, 1985, 2233
BstV2I GAAGAC 2 cut(s) 275, 1374
BstX2I RGATCY 1 cut(s) 1110
BstYI RGATCY 1 cut(s) 1110
BstZI CGGCCG 1 cut(s) 2318
Bsu15I ATCGAT 1 cut(s) 1454
BsuI GTATCC 1 cut(s) 2103
BsuRI GGCC 8 cut(s) 302, 386, 429, 1172, 1376, 1586, 2320, 2337
BsuTUI ATCGAT 1 cut(s) 1454
BtsCI GGATG 2 cut(s) 451, 2155
BtsI GCAGTG 1 cut(s) 341
BtsIMutI CAGTG 5 cut(s) 341, 998, 1703, 1808, 2136
Cac8I GCNNGC 9 cut(s) 296, 300, 1170, 1182, 1491, 1689, 1701, 1794, 1806
CaiI CAGNNNCTG 1 cut(s) 541
CfoI GCGC 6 cut(s) 279, 372, 663, 832, 877, 1439
Cfr10I RCCGGY 2 cut(s) 173, 2316
Cfr13I GGNCC 9 cut(s) 301, 343, 352, 385, 532, 2228, 2294, 2336, 2387
ClaI ATCGAT 1 cut(s) 1454
CseI GACGC 2 cut(s) 179, 1996
Csp6I GTAC 3 cut(s) 183, 286, 2040
CviAII CATG 1 cut(s) 652
CviQI GTAC 3 cut(s) 183, 286, 2040
DdeI CTNAG 3 cut(s) 723, 815, 1448
EaeI YGGCCR 1 cut(s) 2318
EagI CGGCCG 1 cut(s) 2318
Eam1104I CTCTTC 4 cut(s) 126, 210, 570, 1677
EarI CTCTTC 4 cut(s) 126, 210, 570, 1677
EciI GGCGGA 5 cut(s) 227, 731, 854, 2148, 2220
Ecl136II GAGCTC 2 cut(s) 1042, 1180
EclXI CGGCCG 1 cut(s) 2318
Eco130I CCWWGG 2 cut(s) 1377, 2243
Eco24I GRGCYC 2 cut(s) 1044, 1182
Eco47I GGWCC 6 cut(s) 343, 352, 532, 2228, 2294, 2387
Eco52I CGGCCG 1 cut(s) 2318
Eco53kI GAGCTC 2 cut(s) 1042, 1180
Eco88I CYCGRG 3 cut(s) 347, 401, 824
EcoICRI GAGCTC 2 cut(s) 1042, 1180
EcoO109I RGGNCCY 1 cut(s) 343
EcoRI GAATTC 3 cut(s) 50, 1765, 1870
EcoRII CCWGG 6 cut(s) 279, 357, 1088, 1551, 1896, 2224
EcoT14I CCWWGG 2 cut(s) 1377, 2243
EcoT22I ATGCAT 1 cut(s) 2313
EcoT38I GRGCYC 2 cut(s) 1044, 1182
ErhI CCWWGG 2 cut(s) 1377, 2243
Esp3I CGTCTC 1 cut(s) 212
FaeI CATG 1 cut(s) 655
FalI AAGNNNNNCTT 2 cut(s) 1118, 1150
FaqI GGGAC 3 cut(s) 298, 1107, 2177
FatI CATG 1 cut(s) 651
FauI CCCGC 2 cut(s) 723, 2226
FauNDI CATATG 1 cut(s) 2164
FbaI TGATCA 3 cut(s) 145, 1203, 1471
FokI GGATG 2 cut(s) 458, 2142
FriOI GRGCYC 2 cut(s) 1044, 1182
FspBI CTAG 4 cut(s) 135, 233, 500, 2376
GlaI GCGC 6 cut(s) 278, 371, 662, 831, 876, 1438
GsuI CTGGAG 4 cut(s) 380, 533, 1022, 1072
HaeIII GGCC 8 cut(s) 302, 386, 429, 1172, 1376, 1586, 2320, 2337
HapII CCGG 6 cut(s) 174, 388, 394, 2058, 2317, 2334
HgaI GACGC 2 cut(s) 179, 1996
HhaI GCGC 6 cut(s) 279, 372, 663, 832, 877, 1439
Hin1I GRCGYC 1 cut(s) 171
Hin1II CATG 1 cut(s) 655
Hin6I GCGC 6 cut(s) 277, 370, 661, 830, 875, 1437
HinP1I GCGC 6 cut(s) 277, 370, 661, 830, 875, 1437
HincII GTYRAC 1 cut(s) 603
HindII GTYRAC 1 cut(s) 603
HpaII CCGG 6 cut(s) 174, 388, 394, 2058, 2317, 2334
HphI GGTGA 5 cut(s) 152, 718, 1466, 1886, 2039
Hpy166II GTNNAC 2 cut(s) 366, 603
Hpy188I TCNGA 9 cut(s) 256, 425, 472, 510, 816, 1239, 1577, 2100, 2107
Hpy188III TCNNGA 6 cut(s) 563, 590, 622, 852, 1100, 1207
Hpy8I GTNNAC 2 cut(s) 366, 603
Hpy99I CGWCG 3 cut(s) 173, 383, 2012
HpyCH4III ACNGT 2 cut(s) 187, 1402
HpyCH4IV ACGT 3 cut(s) 33, 320, 2048
HpyF3I CTNAG 3 cut(s) 723, 815, 1448
HpySE526I ACGT 3 cut(s) 33, 320, 2048
Hsp92I GRCGYC 1 cut(s) 171
Hsp92II CATG 1 cut(s) 655
HspAI GCGC 6 cut(s) 277, 370, 661, 830, 875, 1437
Ksp22I TGATCA 3 cut(s) 145, 1203, 1471
LguI GCTCTTC 1 cut(s) 1677
LmnI GCTCC 7 cut(s) 552, 592, 727, 862, 904, 1039, 1381
Lsp1109I GCAGC 4 cut(s) 1177, 1687, 1985, 2233
LweI GCATC 1 cut(s) 436
MaeI CTAG 4 cut(s) 135, 233, 500, 2376
MaeII ACGT 3 cut(s) 33, 320, 2048
MaeIII GTNAC 2 cut(s) 29, 2176
MbiI CCGCTC 4 cut(s) 468, 595, 730, 1479
MfeI CAATTG 1 cut(s) 1025
MflI RGATCY 1 cut(s) 1110
MhlI GDGCHC 4 cut(s) 408, 1044, 1182, 2265
MlyI GAGTC 5 cut(s) 265, 371, 464, 1928, 2048
MmeI TCCRAC 4 cut(s) 513, 1138, 1449, 1701
Mph1103I ATGCAT 1 cut(s) 2313
MseI TTAA 2 cut(s) 12, 2395
MspA1I CMGCKG 3 cut(s) 1322, 1637, 2114
MspI CCGG 6 cut(s) 174, 388, 394, 2058, 2317, 2334
MunI CAATTG 1 cut(s) 1025
Mva1269I GAATGC 2 cut(s) 1000, 2313
MvaI CCWGG 6 cut(s) 281, 359, 1090, 1553, 1898, 2226
MvnI CGCG 7 cut(s) 370, 411, 432, 832, 877, 1437, 2082
NciI CCSGG 4 cut(s) 388, 395, 2059, 2334
NdeI CATATG 1 cut(s) 2164
NlaIII CATG 1 cut(s) 655
NlaIV GGNNCC 5 cut(s) 156, 392, 1953, 2063, 2109
NmuCI GTSAC 1 cut(s) 2176
NsiI ATGCAT 1 cut(s) 2313
NspV TTCGAA 2 cut(s) 1769, 1874
PaeR7I CTCGAG 3 cut(s) 347, 401, 824
PciSI GCTCTTC 1 cut(s) 1677
PcsI WCGNNNNNNNCGW 2 cut(s) 408, 551
PctI GAATGC 2 cut(s) 1000, 2313
Pfl23II CGTACG 1 cut(s) 285
PfoI TCCNGGA 1 cut(s) 393
PleI GAGTC 5 cut(s) 265, 370, 463, 1928, 2048
PpsI GAGTC 5 cut(s) 265, 370, 463, 1928, 2048
PpuMI RGGWCCY 1 cut(s) 343
PshBI ATTAAT 1 cut(s) 12
Psp124BI GAGCTC 2 cut(s) 1044, 1182
Psp5II RGGWCCY 1 cut(s) 343
Psp6I CCWGG 6 cut(s) 279, 357, 1088, 1551, 1896, 2224
PspGI CCWGG 6 cut(s) 279, 357, 1088, 1551, 1896, 2224
PspLI CGTACG 1 cut(s) 285
PspN4I GGNNCC 5 cut(s) 156, 392, 1953, 2063, 2109
PspPI GGNCC 9 cut(s) 301, 343, 352, 385, 532, 2228, 2294, 2336, 2387
PspPPI RGGWCCY 1 cut(s) 343
PspXI VCTCGAGB 3 cut(s) 347, 401, 824
PstI CTGCAG 2 cut(s) 93, 1143
PstNI CAGNNNCTG 1 cut(s) 541
PsuI RGATCY 1 cut(s) 1110
PvuII CAGCTG 1 cut(s) 2114
RsaI GTAC 3 cut(s) 184, 287, 2041
RsaNI GTAC 3 cut(s) 183, 286, 2040
SacI GAGCTC 2 cut(s) 1044, 1182
SapI GCTCTTC 1 cut(s) 1677
SaqAI TTAA 2 cut(s) 12, 2395
Sau96I GGNCC 9 cut(s) 301, 343, 352, 385, 532, 2228, 2294, 2336, 2387
SchI GAGTC 5 cut(s) 265, 371, 464, 1928, 2048
SduI GDGCHC 4 cut(s) 408, 1044, 1182, 2265
SfaNI GCATC 1 cut(s) 436
SfcI CTRYAG 2 cut(s) 89, 1139
Sfr274I CTCGAG 3 cut(s) 347, 401, 824
SfuI TTCGAA 2 cut(s) 1769, 1874
SinI GGWCC 6 cut(s) 343, 352, 532, 2228, 2294, 2387
SlaI CTCGAG 3 cut(s) 347, 401, 824
SmlI CTYRAG 6 cut(s) 74, 347, 401, 824, 989, 1385
SmoI CTYRAG 6 cut(s) 74, 347, 401, 824, 989, 1385
SspMI CTAG 4 cut(s) 135, 233, 500, 2376
SstI GAGCTC 2 cut(s) 1044, 1182
StyI CCWWGG 2 cut(s) 1377, 2243
TaaI ACNGT 2 cut(s) 187, 1402
TaiI ACGT 3 cut(s) 36, 323, 2051
Tru1I TTAA 2 cut(s) 12, 2395
Tru9I TTAA 2 cut(s) 12, 2395
TscAI CASTG 5 cut(s) 341, 1005, 1710, 1815, 2136
TseFI GTSAC 1 cut(s) 2176
TseI GCWGC 4 cut(s) 1165, 1675, 1973, 2221
Tsp45I GTSAC 1 cut(s) 2176
TspDTI ATGAA 6 cut(s) 17, 640, 1640, 1970, 2013, 2181
TspGWI ACGGA 4 cut(s) 62, 319, 367, 620
TspRI CASTG 5 cut(s) 341, 1005, 1710, 1815, 2136
VpaK11BI GGWCC 6 cut(s) 343, 352, 532, 2228, 2294, 2387
VspI ATTAAT 1 cut(s) 12
XapI RAATTY 4 cut(s) 50, 460, 1765, 1870
XhoI CTCGAG 3 cut(s) 347, 401, 824
XspI CTAG 4 cut(s) 135, 233, 500, 2376
Zsp2I ATGCAT 1 cut(s) 2313
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.