Rmu_sc0008797.1_g000002

FRIGIDA-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008797.1
OG0000126
Physical Location & Seq
Forward (+)
3027 .. 7180
4154 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008797.1_g000002.1.cds

Sequence Viewer

Length: 3063 bp
atggaagagatgatctcggatttgaaagaatcggaggtggaccaaattgctctggccgaagcattcgagaatttgctagcccgctgcaagcaaattggggatcagttcatctcgacccggagcacaatctcgacccggtttaaggagctccagacccgcgaggaggaaattgggcgccgggagaagcttctggaaaagaaagagtccggctttaagtcgaaggaggaggagttggatgcaattgaggaggccattacagagaagctactggagtttgaagaaggtaagacccaattggaaagacttaatttttcgattgatgataaagagaggagggttttggaagttgaggaattgattagggtaaaagagagggagtgtgatttgatcgaaaatcgtatcgaaaagggtaccaatatgatgattaggattgaggagagtattaaagaaatggatttgaaggtgaaaggttttgacttgcataagaaagaaatggaagattggagcagtaagcttgaattgaaagagaaggaactagagaggttgtttgagaagcttagattgaaagaggcgttattagaaccaaatgttgtagagcttcatgttcttgctaacagcgttgaagagtgcctcaatgaagctcaaaggagggagagggaagttgaattgaaacagagacgagttgaatcaagagttaaggaagtagagttggctgagatgagggtcgaagagtgcctcaatgaagctcaaaggaggaagggggaagttgaatggaaagagagacgaggtgaatcaagagttaaggaagtagagttagctgagatgagggtcaatgagtgcctcaatgaaggtcagaggaaagagagggaagttgaattgaaacagagacgagttgaatcaagagttaaggaagtagagttagctgagatgagggtcaatgagtgcctcaatgaaggtcagaggaaagagagggaagttgaattgaaacagagacgagttgaatcaagagttaaggaagtagagttggctgagatgagggtcgaagagtgcctcaatgaagctcaaaggagggagggggaagttgaatggaaagagagacgagttgaatcaagagttaaggaagtagagttagctgagatgagggtcgaagagtgccttaatgaagctcaaaggagggagggggaagttgaattgaaagagagacgagttgaatcaagagttaaggaagtagagttggctgagatgagggtcaatgagtgcctcaatgaaggtcagaggaaagagagggaagttgaattgaaagagagacgagttgaatcaagagttaaggaagttgagttggctgagatgagggtcaatgagtgcctcaatgaagctcacaggaaagagaaggaagttgaatcgaaagttaaggaacttgagttgactgagatgagggtcaaggaacgcctcaataaggttgaattgaaagaagagcatctttgtttaatggagaagttgatggaagaaaacaaaagacgtttggatgtcctcatgaagacttcagaagagttggaaaaacacttggattctctccaaaagtcggtggaagagcgcgaaaggaatttggatttggtatctgatgaacttaaaaggaaagagagggaagttgaattgaaagagagacgagttgaatcaagagttaaggaagttgagttggctgagatgagggtcaaggaacgcctcaataaggttgaattgaaagaagagcatctttgtttaatggagaagttgatggaagaaaacaaaagacgtttggatgtactcatgaatacttcagaagagttggaaaaacacttggattcactccaaaagtcggtggaagagcgcgaaaggaatttggatttggtatctgatgaacttaaaaggaaagagagggaatttcaacagcgggccgaagcgcttgaattgaactgggcacaatttgattcgccagggaagattcagcagttggaatatacacctggggttgacaatgcggttgtttcttcatctgtgaccaacaacatttcttcctttgtcaaagcggacgaaccagaatcttcactgtctaaaaatgcagcaagttttctttcctcaaatcttcaaccaaatgccaccagtgatgaaggatatgtcccagggtttctaaatgagaatttaagtgggaataatttcatagataatgaattggctgcttctcttcggttgttacaggacccagctaaactcgtgttatataatatgcaaaaatcccttgatcagtacttaagaaatggatattttgaagaaagtataatgtcaggtaacctttccatattgaaggagctaatgagtatttcaccacatgttggacctcatctgaaagtagatgcaacatatctagcagcccagtggaaaacaaagatgagaggcaataccgaaaattcagtggagagtttggcattcttgttgtttataactctgtatggattggtttctatgttgaatgtagatgagatagtaaagcttcttgggttgatttctcagaataaaagggctctcgaattatgtcagacacatgcttttgcagttaagatctctgatcttattcacagtcttattgaaaggaagcagctgcctgtggctgttagatgtatttgcatgctcaagttcactgacatgctccccctagtaccactcctagaagagtatgtgcaggatgcaatggaaagtttcaaagaaatttgtgggttaaggattactcctgatgaaaaggtcaagatttttaaaaaacaaatagctgatgcaagagctttggttcaatgcctcaaagattacaaccttggatccgaacacccgtccaatgccattgaaatacaaatagttcagctggaaacactggcggagaattggaaacttttggtgccccctctttgtcccagtatcattgatcaacacaaggatggaaaaagaaagaagcataatactagcacttctgaccctgagttccaaccacaacagcagcgtaaaataaagattgtctttcgtggtattggaccctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida

Protein Analysis

1020

Amino Acids

119.81

Weight (kDa)

5.26

Isoelectric Point (pI)

49.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2477
Acc65I GGTACC 1 cut(s) 410
AccB1I GGYRCC 3 cut(s) 174, 410, 2923
AccB7I CCANNNNNTGG 1 cut(s) 2369
AccII CGCG 3 cut(s) 159, 1596, 1869
AciI CCGC 6 cut(s) 82, 157, 1930, 2018, 2066, 2903
AclWI GGATC 3 cut(s) 108, 2841, 2854
AcoI YGGCCR 1 cut(s) 54
AcsI RAATTY 7 cut(s) 70, 1603, 1876, 1919, 2176, 2443, 2742
AcuI CTGAAG 2 cut(s) 1527, 1800
AcyI GRCGYC 1 cut(s) 175
AfaI GTAC 4 cut(s) 412, 1803, 2285, 2694
AfeI AGCGCT 1 cut(s) 1941
AfiI CCNNNNNNNGG 7 cut(s) 142, 163, 1456, 1582, 1729, 1855, 2369
AflII CTTAAG 1 cut(s) 2287
AflIII ACRYGT 1 cut(s) 2365
AjnI CCWGG 3 cut(s) 1972, 2002, 2158
AjuI GAANNNNNNNTTGG 4 cut(s) 1595, 1627, 1868, 1900
Alw21I GWGCWC 2 cut(s) 125, 150
Alw26I GTCTC 8 cut(s) 670, 775, 880, 985, 1090, 1195, 1300, 1657
AlwI GGATC 3 cut(s) 108, 2841, 2854
Aor51HI AGCGCT 1 cut(s) 1941
AoxI GGCC 3 cut(s) 54, 249, 1932
ApeKI GCWGC 7 cut(s) 84, 2099, 2213, 2405, 2632, 2635, 3022
ApoI RAATTY 7 cut(s) 70, 1603, 1876, 1919, 2176, 2443, 2742
Asp700I GAANNNNTTC 1 cut(s) 2192
Asp718I GGTACC 1 cut(s) 410
AspLEI GCGC 4 cut(s) 177, 1596, 1869, 1942
AspS9I GGNCC 5 cut(s) 40, 1932, 2236, 2372, 3056
AsuC2I CCSGG 3 cut(s) 118, 136, 179
AsuHPI GGTGA 3 cut(s) 475, 800, 2352
AsuNHI GCTAGC 1 cut(s) 76
AvaII GGWCC 4 cut(s) 40, 2236, 2372, 3056
BaeGI GKGCMC 2 cut(s) 1960, 2928
BamHI GGATCC 1 cut(s) 2846
BanI GGYRCC 3 cut(s) 174, 410, 2923
BanII GRGCYC 2 cut(s) 150, 2560
BauI CACGAG 1 cut(s) 2249
BbsI GAAGAC 1 cut(s) 1544
Bbv12I GWGCWC 2 cut(s) 125, 150
BbvI GCAGC 7 cut(s) 71, 2111, 2200, 2417, 2622, 2644, 3034
BccI CCATC 3 cut(s) 1495, 1768, 2957
BciT130I CCWGG 3 cut(s) 1974, 2004, 2160
BclI TGATCA 2 cut(s) 2278, 2950
BcnI CCSGG 3 cut(s) 118, 136, 179
BcoDI GTCTC 8 cut(s) 670, 775, 880, 985, 1090, 1195, 1300, 1657
BfaI CTAG 7 cut(s) 77, 536, 2402, 2690, 2702, 2988, 3061
BfoI RGCGCY 2 cut(s) 178, 1943
BfrI CTTAAG 1 cut(s) 2287
BglII AGATCT 1 cut(s) 2595
BisI GCNGC 7 cut(s) 85, 2100, 2214, 2406, 2633, 2636, 3023
BlsI GCNGC 7 cut(s) 86, 2101, 2215, 2407, 2634, 2637, 3024
BmcAI AGTACT 1 cut(s) 2285
Bme1390I CCNGG 6 cut(s) 118, 136, 179, 1974, 2004, 2160
Bme18I GGWCC 4 cut(s) 40, 2236, 2372, 3056
BmgT120I GGNCC 5 cut(s) 40, 1932, 2236, 2372, 3056
BmiI GGNNCC 6 cut(s) 176, 412, 2238, 2848, 2925, 3058
BmrFI CCNGG 6 cut(s) 118, 136, 179, 1974, 2004, 2160
BmrI ACTGGG 3 cut(s) 1963, 2404, 2934
BmsI GCATC 6 cut(s) 226, 1486, 1759, 2380, 2710, 2794
BmtI GCTAGC 1 cut(s) 80
BmuI ACTGGG 3 cut(s) 1963, 2404, 2934
BpiI GAAGAC 1 cut(s) 1544
BplI GAGNNNNNCTC 1 cut(s) 31
BpmI CTGGAG 2 cut(s) 134, 290
BpuEI CTTGAG 2 cut(s) 1439, 2651
BpuMI CCSGG 3 cut(s) 118, 136, 179
BsaHI GRCGYC 1 cut(s) 175
BsaJI CCNNGG 5 cut(s) 1973, 2003, 2158, 2159, 2842
BsaXI ACNNNNNCTCC 2 cut(s) 215, 245
Bsc4I CCNNNNNNNGG 7 cut(s) 142, 163, 1456, 1582, 1729, 1855, 2369
Bse1I ACTGG 6 cut(s) 273, 1958, 2139, 2410, 2904, 2940
Bse3DI GCAATG 1 cut(s) 2730
BseBI CCWGG 3 cut(s) 1974, 2004, 2160
BseDI CCNNGG 5 cut(s) 1973, 2003, 2158, 2159, 2842
BseGI GGATG 5 cut(s) 241, 1531, 1804, 2725, 2968
BseLI CCNNNNNNNGG 7 cut(s) 142, 163, 1456, 1582, 1729, 1855, 2369
BseMI GCAATG 1 cut(s) 2730
BseNI ACTGG 6 cut(s) 273, 1958, 2139, 2410, 2904, 2940
BseRI GAGGAG 6 cut(s) 176, 239, 242, 260, 346, 449
BseSI GKGCMC 2 cut(s) 1960, 2928
BseXI GCAGC 7 cut(s) 71, 2111, 2200, 2417, 2622, 2644, 3034
BseYI CCCAGC 1 cut(s) 2239
BsgI GTGCAG 1 cut(s) 2735
Bsh1236I CGCG 3 cut(s) 159, 1596, 1869
BshFI GGCC 3 cut(s) 56, 251, 1934
BshNI GGYRCC 3 cut(s) 174, 410, 2923
BsiHKAI GWGCWC 2 cut(s) 125, 150
BsiSI CCGG 4 cut(s) 118, 136, 178, 207
BslFI GGGAC 2 cut(s) 2141, 2922
BslI CCNNNNNNNGG 7 cut(s) 142, 163, 1456, 1582, 1729, 1855, 2369
BsmAI GTCTC 8 cut(s) 670, 775, 880, 985, 1090, 1195, 1300, 1657
BsmBI CGTCTC 8 cut(s) 670, 775, 880, 985, 1090, 1195, 1300, 1657
BsmFI GGGAC 2 cut(s) 2141, 2922
BsmI GAATGC 2 cut(s) 62, 2462
BsnI GGCC 3 cut(s) 56, 251, 1934
Bsp1286I GDGCHC 5 cut(s) 125, 150, 1960, 2560, 2928
Bsp143I GATC 8 cut(s) 12, 100, 387, 2278, 2595, 2602, 2846, 2950
BspACI CCGC 6 cut(s) 82, 157, 1930, 2018, 2066, 2903
BspANI GGCC 3 cut(s) 56, 251, 1934
BspFNI CGCG 3 cut(s) 159, 1596, 1869
BspHI TCATGA 2 cut(s) 1533, 1806
BspLI GGNNCC 6 cut(s) 176, 412, 2238, 2848, 2925, 3058
BspOI GCTAGC 1 cut(s) 80
BspPI GGATC 3 cut(s) 108, 2841, 2854
BspQI GCTCTTC 4 cut(s) 1467, 1584, 1740, 1857
BspT107I GGYRCC 3 cut(s) 174, 410, 2923
BspTI CTTAAG 1 cut(s) 2287
BsrDI GCAATG 1 cut(s) 2730
BsrI ACTGG 6 cut(s) 273, 1958, 2139, 2410, 2904, 2940
BssECI CCNNGG 5 cut(s) 1973, 2003, 2158, 2159, 2842
BssMI GATC 8 cut(s) 12, 100, 387, 2278, 2595, 2602, 2846, 2950
BssNI GRCGYC 1 cut(s) 175
BssSI CACGAG 1 cut(s) 2249
BssT1I CCWWGG 1 cut(s) 2842
Bst2BI CACGAG 1 cut(s) 2249
Bst2UI CCWGG 3 cut(s) 1974, 2004, 2160
Bst4CI ACNGT 2 cut(s) 2088, 2615
BstACI GRCGYC 1 cut(s) 175
BstAFI CTTAAG 1 cut(s) 2287
BstC8I GCNNGC 5 cut(s) 78, 82, 89, 1932, 2663
BstEII GGTNACC 1 cut(s) 2324
BstENI CCTNNNNNAGG 2 cut(s) 1454, 1727
BstF5I GGATG 5 cut(s) 241, 1531, 1804, 2725, 2968
BstFNI CGCG 3 cut(s) 159, 1596, 1869
BstH2I RGCGCY 2 cut(s) 178, 1943
BstHHI GCGC 4 cut(s) 177, 1596, 1869, 1942
BstKTI GATC 8 cut(s) 15, 103, 390, 2281, 2598, 2605, 2849, 2953
BstMAI GTCTC 8 cut(s) 670, 775, 880, 985, 1090, 1195, 1300, 1657
BstMBI GATC 8 cut(s) 12, 100, 387, 2278, 2595, 2602, 2846, 2950
BstNI CCWGG 3 cut(s) 1974, 2004, 2160
BstNSI RCATGY 4 cut(s) 2369, 2582, 2665, 2683
BstPI GGTNACC 1 cut(s) 2324
BstSCI CCNGG 6 cut(s) 116, 134, 177, 1972, 2002, 2158
BstSLI GKGCMC 2 cut(s) 1960, 2928
BstUI CGCG 3 cut(s) 159, 1596, 1869
BstV1I GCAGC 7 cut(s) 71, 2111, 2200, 2417, 2622, 2644, 3034
BstV2I GAAGAC 1 cut(s) 1544
BstX2I RGATCY 2 cut(s) 2595, 2846
BstYI RGATCY 2 cut(s) 2595, 2846
BsuRI GGCC 3 cut(s) 56, 251, 1934
BtsCI GGATG 5 cut(s) 241, 1531, 1804, 2725, 2968
BtsIMutI CAGTG 6 cut(s) 2084, 2146, 2417, 2454, 2673, 2897
Cac8I GCNNGC 5 cut(s) 78, 82, 89, 1932, 2663
CciI TCATGA 2 cut(s) 1533, 1806
CfoI GCGC 4 cut(s) 177, 1596, 1869, 1942
Cfr13I GGNCC 5 cut(s) 40, 1932, 2236, 2372, 3056
Csp6I GTAC 4 cut(s) 411, 1802, 2284, 2693
CviAII CATG 7 cut(s) 602, 1534, 1807, 2366, 2579, 2662, 2680
CviQI GTAC 4 cut(s) 411, 1802, 2284, 2693
DinI GGCGCC 1 cut(s) 176
DpnI GATC 8 cut(s) 14, 102, 389, 2280, 2597, 2604, 2848, 2952
DpnII GATC 8 cut(s) 12, 100, 387, 2278, 2595, 2602, 2846, 2950
DraI TTTAAA 1 cut(s) 2788
EaeI YGGCCR 1 cut(s) 54
EciI GGCGGA 1 cut(s) 2918
Ecl136II GAGCTC 1 cut(s) 148
Eco130I CCWWGG 1 cut(s) 2842
Eco24I GRGCYC 2 cut(s) 150, 2560
Eco47I GGWCC 4 cut(s) 40, 2236, 2372, 3056
Eco47III AGCGCT 1 cut(s) 1941
Eco53kI GAGCTC 1 cut(s) 148
Eco57I CTGAAG 2 cut(s) 1527, 1800
Eco91I GGTNACC 1 cut(s) 2324
EcoICRI GAGCTC 1 cut(s) 148
EcoNI CCTNNNNNAGG 2 cut(s) 1454, 1727
EcoO109I RGGNCCY 1 cut(s) 2236
EcoO65I GGTNACC 1 cut(s) 2324
EcoRII CCWGG 3 cut(s) 1972, 2002, 2158
EcoT14I CCWWGG 1 cut(s) 2842
EcoT38I GRGCYC 2 cut(s) 150, 2560
EgeI GGCGCC 1 cut(s) 176
EheI GGCGCC 1 cut(s) 176
ErhI CCWWGG 1 cut(s) 2842
Esp3I CGTCTC 8 cut(s) 670, 775, 880, 985, 1090, 1195, 1300, 1657
FaeI CATG 7 cut(s) 605, 1537, 1810, 2369, 2582, 2665, 2683
FalI AAGNNNNNCTT 8 cut(s) 1140, 1172, 1464, 1496, 1737, 1769, 3026, 3058
FaqI GGGAC 2 cut(s) 2141, 2922
FatI CATG 7 cut(s) 601, 1533, 1806, 2365, 2578, 2661, 2679
FauI CCCGC 3 cut(s) 89, 164, 1923
FbaI TGATCA 2 cut(s) 2278, 2950
Fnu4HI GCNGC 7 cut(s) 85, 2100, 2214, 2406, 2633, 2636, 3023
FokI GGATG 5 cut(s) 248, 1538, 1811, 2732, 2975
FriOI GRGCYC 2 cut(s) 150, 2560
Fsp4HI GCNGC 7 cut(s) 85, 2100, 2214, 2406, 2633, 2636, 3023
FspBI CTAG 7 cut(s) 77, 536, 2402, 2690, 2702, 2988, 3061
GlaI GCGC 4 cut(s) 176, 1595, 1868, 1941
GluI GCNGC 7 cut(s) 85, 2100, 2214, 2406, 2633, 2636, 3023
GsaI CCCAGC 1 cut(s) 2243
GsuI CTGGAG 2 cut(s) 134, 290
HaeII RGCGCY 2 cut(s) 178, 1943
HaeIII GGCC 3 cut(s) 56, 251, 1934
HapII CCGG 4 cut(s) 118, 136, 178, 207
HhaI GCGC 4 cut(s) 177, 1596, 1869, 1942
Hin1I GRCGYC 1 cut(s) 175
Hin1II CATG 7 cut(s) 605, 1537, 1810, 2369, 2582, 2665, 2683
Hin6I GCGC 4 cut(s) 175, 1594, 1867, 1940
HinP1I GCGC 4 cut(s) 175, 1594, 1867, 1940
HincII GTYRAC 2 cut(s) 1425, 2011
HindII GTYRAC 2 cut(s) 1425, 2011
HindIII AAGCTT 4 cut(s) 185, 512, 554, 2525
HpaII CCGG 4 cut(s) 118, 136, 178, 207
HphI GGTGA 3 cut(s) 475, 800, 2352
Hpy166II GTNNAC 4 cut(s) 40, 1425, 2011, 2673
Hpy8I GTNNAC 4 cut(s) 40, 1425, 2011, 2673
HpyCH4III ACNGT 2 cut(s) 2088, 2615
HpyCH4IV ACGT 2 cut(s) 1519, 1792
HpySE526I ACGT 2 cut(s) 1519, 1792
Hsp92I GRCGYC 1 cut(s) 175
Hsp92II CATG 7 cut(s) 605, 1537, 1810, 2369, 2582, 2665, 2683
HspAI GCGC 4 cut(s) 175, 1594, 1867, 1940
KasI GGCGCC 1 cut(s) 174
KpnI GGTACC 1 cut(s) 414
Ksp22I TGATCA 2 cut(s) 2278, 2950
Kzo9I GATC 8 cut(s) 12, 100, 387, 2278, 2595, 2602, 2846, 2950
LguI GCTCTTC 4 cut(s) 1467, 1584, 1740, 1857
LmnI GCTCC 6 cut(s) 120, 145, 153, 504, 2344, 2688
Lsp1109I GCAGC 7 cut(s) 71, 2111, 2200, 2417, 2622, 2644, 3034
LweI GCATC 6 cut(s) 226, 1486, 1759, 2380, 2710, 2794
MaeI CTAG 7 cut(s) 77, 536, 2402, 2690, 2702, 2988, 3061
MaeII ACGT 2 cut(s) 1519, 1792
MaeIII GTNAC 3 cut(s) 2035, 2229, 2324
MalI GATC 8 cut(s) 14, 102, 389, 2280, 2597, 2604, 2848, 2952
MboI GATC 8 cut(s) 12, 100, 387, 2278, 2595, 2602, 2846, 2950
MfeI CAATTG 2 cut(s) 240, 293
MflI RGATCY 2 cut(s) 2595, 2846
MhlI GDGCHC 5 cut(s) 125, 150, 1960, 2560, 2928
Mly113I GGCGCC 1 cut(s) 175
MlyI GAGTC 1 cut(s) 212
MmeI TCCRAC 6 cut(s) 213, 1533, 1806, 1971, 2350, 3034
MroXI GAANNNNTTC 1 cut(s) 2192
MslI CAYNNNNRTG 2 cut(s) 2678, 2961
MspA1I CMGCKG 4 cut(s) 84, 1930, 2635, 2890
MspCI CTTAAG 1 cut(s) 2287
MspI CCGG 4 cut(s) 118, 136, 178, 207
MspR9I CCNGG 6 cut(s) 118, 136, 179, 1974, 2004, 2160
MunI CAATTG 2 cut(s) 240, 293
Mva1269I GAATGC 2 cut(s) 62, 2462
MvaI CCWGG 3 cut(s) 1974, 2004, 2160
MvnI CGCG 3 cut(s) 159, 1596, 1869
NarI GGCGCC 1 cut(s) 175
NciI CCSGG 3 cut(s) 118, 136, 179
NdeII GATC 8 cut(s) 12, 100, 387, 2278, 2595, 2602, 2846, 2950
NheI GCTAGC 1 cut(s) 76
NlaIII CATG 7 cut(s) 605, 1537, 1810, 2369, 2582, 2665, 2683
NlaIV GGNNCC 6 cut(s) 176, 412, 2238, 2848, 2925, 3058
NmuCI GTSAC 1 cut(s) 2035
NspI RCATGY 4 cut(s) 2369, 2582, 2665, 2683
PaeI GCATGC 1 cut(s) 2665
PagI TCATGA 2 cut(s) 1533, 1806
PasI CCCWGGG 1 cut(s) 2159
PciI ACATGT 1 cut(s) 2365
PciSI GCTCTTC 4 cut(s) 1467, 1584, 1740, 1857
PctI GAATGC 2 cut(s) 62, 2462
PdmI GAANNNNTTC 1 cut(s) 2192
PflMI CCANNNNNTGG 1 cut(s) 2369
PkrI GCNGC 7 cut(s) 86, 2101, 2215, 2407, 2634, 2637, 3024
PleI GAGTC 1 cut(s) 211
PluTI GGCGCC 1 cut(s) 178
PpsI GAGTC 1 cut(s) 211
PpuMI RGGWCCY 1 cut(s) 2236
PscI ACATGT 1 cut(s) 2365
PsiI TTATAA 1 cut(s) 2477
Psp124BI GAGCTC 1 cut(s) 150
Psp5II RGGWCCY 1 cut(s) 2236
Psp6I CCWGG 3 cut(s) 1972, 2002, 2158
PspEI GGTNACC 1 cut(s) 2324
PspFI CCCAGC 1 cut(s) 2239
PspGI CCWGG 3 cut(s) 1972, 2002, 2158
PspN4I GGNNCC 6 cut(s) 176, 412, 2238, 2848, 2925, 3058
PspPI GGNCC 5 cut(s) 40, 1932, 2236, 2372, 3056
PspPPI RGGWCCY 1 cut(s) 2236
PsuI RGATCY 2 cut(s) 2595, 2846
PvuII CAGCTG 2 cut(s) 2635, 2890
RsaI GTAC 4 cut(s) 412, 1803, 2285, 2694
RsaNI GTAC 4 cut(s) 411, 1802, 2284, 2693
RseI CAYNNNNRTG 2 cut(s) 2678, 2961
SacI GAGCTC 1 cut(s) 150
SapI GCTCTTC 4 cut(s) 1467, 1584, 1740, 1857
SatI GCNGC 7 cut(s) 85, 2100, 2214, 2406, 2633, 2636, 3023
Sau3AI GATC 8 cut(s) 12, 100, 387, 2278, 2595, 2602, 2846, 2950
Sau96I GGNCC 5 cut(s) 40, 1932, 2236, 2372, 3056
ScaI AGTACT 1 cut(s) 2285
SchI GAGTC 1 cut(s) 212
ScrFI CCNGG 6 cut(s) 118, 136, 179, 1974, 2004, 2160
SduI GDGCHC 5 cut(s) 125, 150, 1960, 2560, 2928
SfaNI GCATC 6 cut(s) 226, 1486, 1759, 2380, 2710, 2794
SfoI GGCGCC 1 cut(s) 176
SinI GGWCC 4 cut(s) 40, 2236, 2372, 3056
SmiMI CAYNNNNRTG 2 cut(s) 2678, 2961
SmlI CTYRAG 3 cut(s) 1418, 2287, 2666
SmoI CTYRAG 3 cut(s) 1418, 2287, 2666
SphI GCATGC 1 cut(s) 2665
SsiI CCGC 6 cut(s) 82, 157, 1930, 2018, 2066, 2903
SspDI GGCGCC 1 cut(s) 174
SspMI CTAG 7 cut(s) 77, 536, 2402, 2690, 2702, 2988, 3061
SstI GAGCTC 1 cut(s) 150
StyD4I CCNGG 6 cut(s) 116, 134, 177, 1972, 2002, 2158
StyI CCWWGG 1 cut(s) 2842
TaaI ACNGT 2 cut(s) 2088, 2615
TaiI ACGT 2 cut(s) 1522, 1795
TatI WGTACW 2 cut(s) 1801, 2283
TscAI CASTG 6 cut(s) 2091, 2146, 2417, 2454, 2680, 2904
TseFI GTSAC 1 cut(s) 2035
TseI GCWGC 7 cut(s) 84, 2099, 2213, 2405, 2632, 2635, 3022
Tsp45I GTSAC 1 cut(s) 2035
TspRI CASTG 6 cut(s) 2091, 2146, 2417, 2454, 2680, 2904
Van91I CCANNNNNTGG 1 cut(s) 2369
Vha464I CTTAAG 1 cut(s) 2287
VpaK11BI GGWCC 4 cut(s) 40, 2236, 2372, 3056
XagI CCTNNNNNAGG 2 cut(s) 1454, 1727
XapI RAATTY 7 cut(s) 70, 1603, 1876, 1919, 2176, 2443, 2742
XceI RCATGY 4 cut(s) 2369, 2582, 2665, 2683
XmnI GAANNNNTTC 1 cut(s) 2192
XspI CTAG 7 cut(s) 77, 536, 2402, 2690, 2702, 2988, 3061
ZrmI AGTACT 1 cut(s) 2285
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.