Rh3BG049500

Frigida-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0000126
Physical Location & Seq
Forward (+)
3295820 .. 3298895
3076 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG049500.1

Sequence Viewer

Length: 1374 bp
ATGGAGGAATTTAAAAAATGGGTTGAAGAACGAGGAAAGGATTTGAATTCACTCTCCTCGGAACTGAAAGTTAAAGAGTGTCAACTTGAACAGGCGGCCAAAGAGCTTGAGTTGACTAAGAAACAATGTGGTGGTGTTGCTCAAGTGAAGATTGGGCCATTGGAAAAGACTCCAGAGAACAATATTACCGACGGTAGAAGTTTGCAGTTGTTCATGTATGAGCATATGAAGAGAAATGATTCAATAAGCAACAAGATCTCATCCTTTCTCCAACAAAAGTCATCAGAACCAGGAAAATTGGTTTTGGATGCAATGCAAGGGTTTTACACTTCAAATTTGACTCTCGAGAACAAGGAGTTTGATTTGGTGCTTATTAGAAGGACATGCATTATTTTGTTGGAAGAATTAAAGAGAGTCTCACCCCAAACTAATCCAGAGGTCAGAGAAGAAGCAATGAAGTTGGCCACTGAGTGGAAGGCTAAGATGAAAGTGGGGAGTGAGAACTGGTTGGAGATTTTGGGTTTTTTGCGGCTTGTTACTACTTATGGATTGACCTCTGCTTATAATGTGAAGGAGCTTCACAGTCTTCTTGATATAGTTGCTCAGCATGAACAAGCAACAGAATTATCATGGGCCCTTGCTACCACAGATAAGGCACATGGATATGATTACAGACCAGCATATAGCAGATCTACGCGAGTTGTTATTCAATGTATCAAAGATTACAACCTCGAGTCTGAATGTCCACCTGAAGAAATTGAATCACAAATTGCTGCGCTTGAAATTGTTAAGGAGCGGAGACGTTTAGCGTCATCTTCTCTTGTTTTGAAGGTTGAACAACAGCAAAAAGTGCTAAAAAATGTTGAAGTACAAGAACAACAAGAGCAGAAAGCCTCCAAGGGTGAACAACAAGAACAGCAAAAAGAACAGAAAACCTCTGAGGCTAAACTACAAGAAAAAGTACAGCAGAAAGCCTCCAATAAGGTTGAAGAACAACAACAGCAACAAGAGAAAAACGCCTCCAAGGTTAAACAGCAAGAACAACAAGAGCAGAAAGCCTCCAAAGTTAAACAATTGCAGAAAAAAGGGAATAAACGTCCAAACAGCACATTTGCCCCCAGGTTTGATCACCAACAGCAGTGTAAAAATAAATTTCAAAGAACATCTATATTAGCTGATAGACACCCGGACCACCCTGACTATCCGAATCCAAGTTCATCAACTTGGACACATGAAAGTAATGGATACCGTGAACAGTTTGGTACTGCCGTCAACAAGTATGAAGTTCATGCTAATTATGGACATCCTGTGCAGTTTGGTACTCCTGCCGATGGTAGCGCTATTTATGCATACGGTGGACAAATCTCGGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Frigida

Protein Analysis

457

Amino Acids

52.36

Weight (kDa)

7.6

Isoelectric Point (pI)

57.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 64 - 217 1.6e-30 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 564
AccB7I CCANNNNNTGG 1 cut(s) 471
AccBSI CCGCTC 1 cut(s) 796
AccII CGCG 1 cut(s) 697
AciI CCGC 3 cut(s) 95, 529, 796
AcoI YGGCCR 2 cut(s) 96, 462
AcsI RAATTY 4 cut(s) 8, 46, 334, 1151
AcuI CTGAAG 1 cut(s) 771
AdeI CACNNNGTG 1 cut(s) 471
AfaI GTAC 4 cut(s) 870, 963, 1264, 1321
AfeI AGCGCT 1 cut(s) 1339
AfiI CCNNNNNNNGG 2 cut(s) 471, 1331
AjnI CCWGG 2 cut(s) 289, 1118
AluBI AGCT 3 cut(s) 106, 577, 1175
AluI AGCT 3 cut(s) 106, 577, 1175
Alw26I GTCTC 2 cut(s) 421, 793
Ama87I CYCGRG 2 cut(s) 344, 731
Aor51HI AGCGCT 1 cut(s) 1339
AoxI GGCC 4 cut(s) 96, 155, 462, 633
ApaI GGGCCC 1 cut(s) 637
ApeKI GCWGC 1 cut(s) 773
ApoI RAATTY 4 cut(s) 8, 46, 334, 1151
Asp700I GAANNNNTTC 1 cut(s) 238
AspLEI GCGC 2 cut(s) 778, 1340
AspS9I GGNCC 4 cut(s) 155, 633, 634, 1189
AsuC2I CCSGG 1 cut(s) 1187
AsuHPI GGTGA 3 cut(s) 411, 914, 1121
AvaI CYCGRG 2 cut(s) 344, 731
AvaII GGWCC 1 cut(s) 1189
BaeGI GKGCMC 1 cut(s) 637
BaeI ACNNNNGTAYC 2 cut(s) 1254, 1287
BalI TGGCCA 1 cut(s) 464
BanII GRGCYC 1 cut(s) 637
BbsI GAAGAC 1 cut(s) 578
BbvI GCAGC 1 cut(s) 760
BccI CCATC 1 cut(s) 1325
BceAI ACGGC 1 cut(s) 1253
BciT130I CCWGG 2 cut(s) 291, 1120
BciVI GTATCC 1 cut(s) 1238
BclI TGATCA 1 cut(s) 1126
BcnI CCSGG 1 cut(s) 1187
BcoDI GTCTC 2 cut(s) 421, 793
BfoI RGCGCY 1 cut(s) 1341
BfuI GTATCC 1 cut(s) 1238
BglII AGATCT 2 cut(s) 255, 689
BisI GCNGC 3 cut(s) 96, 530, 774
BlpI GCTNAGC 1 cut(s) 603
BlsI GCNGC 3 cut(s) 97, 531, 775
Bme1390I CCNGG 3 cut(s) 291, 1120, 1187
Bme18I GGWCC 1 cut(s) 1189
BmeT110I CYCGRG 2 cut(s) 344, 731
BmgT120I GGNCC 4 cut(s) 155, 633, 634, 1189
BmiI GGNNCC 1 cut(s) 635
BmrFI CCNGG 3 cut(s) 291, 1120, 1187
BmsI GCATC 1 cut(s) 298
BpiI GAAGAC 1 cut(s) 578
BpmI CTGGAG 1 cut(s) 156
Bpu1102I GCTNAGC 1 cut(s) 603
BpuEI CTTGAG 2 cut(s) 126, 128
BpuMI CCSGG 1 cut(s) 1187
BsaJI CCNNGG 4 cut(s) 57, 897, 1023, 1118
Bsc4I CCNNNNNNNGG 2 cut(s) 471, 1331
Bse1I ACTGG 1 cut(s) 509
Bse3DI GCAATG 2 cut(s) 318, 459
BseBI CCWGG 2 cut(s) 291, 1120
BseDI CCNNGG 4 cut(s) 57, 897, 1023, 1118
BseGI GGATG 3 cut(s) 260, 313, 1303
BseLI CCNNNNNNNGG 2 cut(s) 471, 1331
BseMI GCAATG 2 cut(s) 318, 459
BseMII CTCAG 3 cut(s) 459, 617, 930
BseNI ACTGG 1 cut(s) 509
BseRI GAGGAG 1 cut(s) 46
BseSI GKGCMC 1 cut(s) 637
BseXI GCAGC 1 cut(s) 760
BsgI GTGCAG 1 cut(s) 1331
Bsh1236I CGCG 1 cut(s) 697
BshFI GGCC 4 cut(s) 98, 157, 464, 635
BsiHKCI CYCGRG 2 cut(s) 344, 731
BsiSI CCGG 1 cut(s) 1187
BslI CCNNNNNNNGG 2 cut(s) 471, 1331
BsmAI GTCTC 2 cut(s) 421, 793
BsmBI CGTCTC 1 cut(s) 793
BsnI GGCC 4 cut(s) 98, 157, 464, 635
BsoBI CYCGRG 2 cut(s) 344, 731
Bsp120I GGGCCC 1 cut(s) 633
Bsp1286I GDGCHC 1 cut(s) 637
Bsp143I GATC 3 cut(s) 255, 689, 1126
Bsp1720I GCTNAGC 1 cut(s) 603
BspACI CCGC 3 cut(s) 95, 529, 796
BspANI GGCC 4 cut(s) 98, 157, 464, 635
BspCNI CTCAG 3 cut(s) 460, 616, 931
BspFNI CGCG 1 cut(s) 697
BspLI GGNNCC 1 cut(s) 635
BsrBI CCGCTC 1 cut(s) 796
BsrDI GCAATG 2 cut(s) 318, 459
BsrI ACTGG 1 cut(s) 509
BssECI CCNNGG 4 cut(s) 57, 897, 1023, 1118
BssMI GATC 3 cut(s) 255, 689, 1126
BssT1I CCWWGG 2 cut(s) 897, 1023
Bst2UI CCWGG 2 cut(s) 291, 1120
Bst4CI ACNGT 5 cut(s) 194, 584, 1250, 1257, 1355
Bst6I CTCTTC 1 cut(s) 224
BstAPI GCANNNNNTGC 1 cut(s) 850
BstDEI CTNAG 5 cut(s) 117, 468, 480, 603, 939
BstF5I GGATG 3 cut(s) 260, 313, 1303
BstFNI CGCG 1 cut(s) 697
BstH2I RGCGCY 1 cut(s) 1341
BstHHI GCGC 2 cut(s) 778, 1340
BstKTI GATC 3 cut(s) 258, 692, 1129
BstMAI GTCTC 2 cut(s) 421, 793
BstMBI GATC 3 cut(s) 255, 689, 1126
BstMWI GCNNNNNNNGC 2 cut(s) 850, 1346
BstNI CCWGG 2 cut(s) 291, 1120
BstNSI RCATGY 1 cut(s) 387
BstSCI CCNGG 3 cut(s) 289, 1118, 1185
BstSLI GKGCMC 1 cut(s) 637
BstUI CGCG 1 cut(s) 697
BstV1I GCAGC 1 cut(s) 760
BstV2I GAAGAC 1 cut(s) 578
BstX2I RGATCY 2 cut(s) 255, 689
BstYI RGATCY 2 cut(s) 255, 689
BsuI GTATCC 1 cut(s) 1238
BsuRI GGCC 4 cut(s) 98, 157, 464, 635
BtsCI GGATG 3 cut(s) 260, 313, 1303
BtsI GCAGTG 1 cut(s) 1145
BtsIMutI CAGTG 2 cut(s) 465, 1145
CfoI GCGC 2 cut(s) 778, 1340
Cfr13I GGNCC 4 cut(s) 155, 633, 634, 1189
CseI GACGC 1 cut(s) 798
Csp6I GTAC 4 cut(s) 869, 962, 1263, 1320
CviAII CATG 7 cut(s) 214, 384, 608, 630, 659, 1232, 1289
CviQI GTAC 4 cut(s) 869, 962, 1263, 1320
DdeI CTNAG 5 cut(s) 117, 468, 480, 603, 939
DpnI GATC 3 cut(s) 257, 691, 1128
DpnII GATC 3 cut(s) 255, 689, 1126
DraI TTTAAA 1 cut(s) 13
DraIII CACNNNGTG 1 cut(s) 471
EaeI YGGCCR 2 cut(s) 96, 462
Eam1104I CTCTTC 1 cut(s) 224
EarI CTCTTC 1 cut(s) 224
Eco130I CCWWGG 2 cut(s) 897, 1023
Eco24I GRGCYC 1 cut(s) 637
Eco47I GGWCC 1 cut(s) 1189
Eco47III AGCGCT 1 cut(s) 1339
Eco57I CTGAAG 1 cut(s) 771
Eco88I CYCGRG 2 cut(s) 344, 731
EcoO109I RGGNCCY 1 cut(s) 634
EcoRI GAATTC 1 cut(s) 46
EcoRII CCWGG 2 cut(s) 289, 1118
EcoT14I CCWWGG 2 cut(s) 897, 1023
EcoT22I ATGCAT 2 cut(s) 389, 1351
EcoT38I GRGCYC 1 cut(s) 637
ErhI CCWWGG 2 cut(s) 897, 1023
Esp3I CGTCTC 1 cut(s) 793
FaeI CATG 7 cut(s) 217, 387, 611, 633, 662, 1235, 1292
FatI CATG 7 cut(s) 213, 383, 607, 629, 658, 1231, 1288
FauNDI CATATG 1 cut(s) 225
FbaI TGATCA 1 cut(s) 1126
Fnu4HI GCNGC 3 cut(s) 96, 530, 774
FokI GGATG 3 cut(s) 247, 320, 1290
FriOI GRGCYC 1 cut(s) 637
Fsp4HI GCNGC 3 cut(s) 96, 530, 774
GlaI GCGC 2 cut(s) 777, 1339
GluI GCNGC 3 cut(s) 96, 530, 774
GsuI CTGGAG 1 cut(s) 156
HaeII RGCGCY 1 cut(s) 1341
HaeIII GGCC 4 cut(s) 98, 157, 464, 635
HapII CCGG 1 cut(s) 1187
HgaI GACGC 1 cut(s) 798
HhaI GCGC 2 cut(s) 778, 1340
Hin1II CATG 7 cut(s) 217, 387, 611, 633, 662, 1235, 1292
Hin6I GCGC 2 cut(s) 776, 1338
HinP1I GCGC 2 cut(s) 776, 1338
HincII GTYRAC 3 cut(s) 83, 114, 1273
HindII GTYRAC 3 cut(s) 83, 114, 1273
HinfI GANTC 7 cut(s) 169, 239, 340, 414, 734, 761, 1207
HpaII CCGG 1 cut(s) 1187
HphI GGTGA 3 cut(s) 411, 914, 1121
Hpy166II GTNNAC 7 cut(s) 83, 114, 746, 905, 1253, 1273, 1358
Hpy188I TCNGA 7 cut(s) 61, 286, 443, 739, 940, 1206, 1369
Hpy188III TCNNGA 5 cut(s) 173, 344, 346, 434, 590
Hpy8I GTNNAC 7 cut(s) 83, 114, 746, 905, 1253, 1273, 1358
Hpy99I CGWCG 1 cut(s) 194
HpyAV CCTTC 4 cut(s) 372, 469, 565, 823
HpyCH4III ACNGT 5 cut(s) 194, 584, 1250, 1257, 1355
HpyCH4IV ACGT 2 cut(s) 802, 1096
HpyCH4V TGCA 7 cut(s) 205, 311, 316, 387, 1078, 1312, 1349
HpyF10VI GCNNNNNNNGC 2 cut(s) 850, 1346
HpyF3I CTNAG 5 cut(s) 117, 468, 480, 603, 939
HpySE526I ACGT 2 cut(s) 802, 1096
Hsp92II CATG 7 cut(s) 217, 387, 611, 633, 662, 1235, 1292
HspAI GCGC 2 cut(s) 776, 1338
Ksp22I TGATCA 1 cut(s) 1126
Kzo9I GATC 3 cut(s) 255, 689, 1126
LmnI GCTCC 2 cut(s) 574, 793
Lsp1109I GCAGC 1 cut(s) 760
LweI GCATC 1 cut(s) 298
MaeII ACGT 2 cut(s) 802, 1096
MaeIII GTNAC 1 cut(s) 535
MalI GATC 3 cut(s) 257, 691, 1128
MbiI CCGCTC 1 cut(s) 796
MboI GATC 3 cut(s) 255, 689, 1126
MboII GAAGA 9 cut(s) 38, 160, 241, 413, 458, 578, 764, 807, 1001
MfeI CAATTG 1 cut(s) 1073
MflI RGATCY 2 cut(s) 255, 689
MhlI GDGCHC 1 cut(s) 637
MlsI TGGCCA 1 cut(s) 464
MluNI TGGCCA 1 cut(s) 464
MlyI GAGTC 4 cut(s) 163, 334, 423, 743
MmeI TCCRAC 3 cut(s) 295, 378, 489
Mox20I TGGCCA 1 cut(s) 464
Mph1103I ATGCAT 2 cut(s) 389, 1351
MroXI GAANNNNTTC 1 cut(s) 238
MscI TGGCCA 1 cut(s) 464
MseI TTAA 6 cut(s) 12, 72, 407, 789, 1029, 1068
MslI CAYNNNNRTG 1 cut(s) 663
Msp20I TGGCCA 1 cut(s) 464
MspI CCGG 1 cut(s) 1187
MspR9I CCNGG 3 cut(s) 291, 1120, 1187
MunI CAATTG 1 cut(s) 1073
MvaI CCWGG 2 cut(s) 291, 1120
MvnI CGCG 1 cut(s) 697
MwoI GCNNNNNNNGC 2 cut(s) 850, 1346
NciI CCSGG 1 cut(s) 1187
NdeI CATATG 1 cut(s) 225
NdeII GATC 3 cut(s) 255, 689, 1126
NlaIII CATG 7 cut(s) 217, 387, 611, 633, 662, 1235, 1292
NlaIV GGNNCC 1 cut(s) 635
NsiI ATGCAT 2 cut(s) 389, 1351
NspI RCATGY 1 cut(s) 387
PaeR7I CTCGAG 2 cut(s) 344, 731
PdmI GAANNNNTTC 1 cut(s) 238
PfeI GAWTC 3 cut(s) 239, 761, 1207
PflMI CCANNNNNTGG 1 cut(s) 471
PkrI GCNGC 3 cut(s) 97, 531, 775
PleI GAGTC 4 cut(s) 163, 334, 422, 742
PpsI GAGTC 4 cut(s) 163, 334, 422, 742
PsiI TTATAA 1 cut(s) 564
Psp6I CCWGG 2 cut(s) 289, 1118
PspGI CCWGG 2 cut(s) 289, 1118
PspN4I GGNNCC 1 cut(s) 635
PspOMI GGGCCC 1 cut(s) 633
PspPI GGNCC 4 cut(s) 155, 633, 634, 1189
PspXI VCTCGAGB 1 cut(s) 731
PsuI RGATCY 2 cut(s) 255, 689
RsaI GTAC 4 cut(s) 870, 963, 1264, 1321
RsaNI GTAC 4 cut(s) 869, 962, 1263, 1320
RseI CAYNNNNRTG 1 cut(s) 663
SaqAI TTAA 6 cut(s) 12, 72, 407, 789, 1029, 1068
SatI GCNGC 3 cut(s) 96, 530, 774
Sau3AI GATC 3 cut(s) 255, 689, 1126
Sau96I GGNCC 4 cut(s) 155, 633, 634, 1189
SchI GAGTC 4 cut(s) 163, 334, 423, 743
ScrFI CCNGG 3 cut(s) 291, 1120, 1187
SduI GDGCHC 1 cut(s) 637
SfaNI GCATC 1 cut(s) 298
Sfr274I CTCGAG 2 cut(s) 344, 731
SinI GGWCC 1 cut(s) 1189
SlaI CTCGAG 2 cut(s) 344, 731
SmiMI CAYNNNNRTG 1 cut(s) 663
SmlI CTYRAG 4 cut(s) 107, 141, 344, 731
SmoI CTYRAG 4 cut(s) 107, 141, 344, 731
SsiI CCGC 3 cut(s) 95, 529, 796
SspI AATATT 1 cut(s) 184
StyD4I CCNGG 3 cut(s) 289, 1118, 1185
StyI CCWWGG 2 cut(s) 897, 1023
TaaI ACNGT 5 cut(s) 194, 584, 1250, 1257, 1355
TaiI ACGT 2 cut(s) 805, 1099
TaqI TCGA 2 cut(s) 345, 732
TatI WGTACW 2 cut(s) 868, 961
TauI GCSGC 2 cut(s) 98, 532
TfiI GAWTC 3 cut(s) 239, 761, 1207
Tru1I TTAA 6 cut(s) 12, 72, 407, 789, 1029, 1068
Tru9I TTAA 6 cut(s) 12, 72, 407, 789, 1029, 1068
TscAI CASTG 2 cut(s) 472, 1145
TseI GCWGC 1 cut(s) 773
TspDTI ATGAA 9 cut(s) 202, 242, 470, 500, 624, 1206, 1248, 1277, 1296
TspRI CASTG 2 cut(s) 472, 1145
Van91I CCANNNNNTGG 1 cut(s) 471
VpaK11BI GGWCC 1 cut(s) 1189
XapI RAATTY 4 cut(s) 8, 46, 334, 1151
XceI RCATGY 1 cut(s) 387
XhoI CTCGAG 2 cut(s) 344, 731
XmnI GAANNNNTTC 1 cut(s) 238
Zsp2I ATGCAT 2 cut(s) 389, 1351
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.