pycom14g00990

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
OG0000126
Physical Location & Seq
Reverse (-)
701616 .. 705587
3972 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g00990.2

Sequence Viewer

Length: 2682 bp
ATGACAGCAATAGAAGAGATAGCTTCGAAGCTGAAGAAGGACCTGGACGACCACGTCGACTCCGTCAGGGTCTCGCTCCACGCCGCATTCGTAGGGCTCCTGGAGCGGGAGAAGGAGATCGGGTCTCGATTCGCTGTCTTGGAAGCAAAAGAGTCGGAATTCGAGTCGGCGATGGTGGTGAAAGGCAGGGAATTACAGGGTATTGTGCGGGAGGTTGAAGAAGGTAAGTCCCAGTTGCAGTCTATTAAGTTATCTTTCGAAAAGTATTCGGTTGAAGAAGGTAAATTGGGAGAATTACAGAAATTGGTTAAGGGTATGGAAATGGAGTATTATAATATGCAACAACGGATGAAACAATTGTCGAAAGAGATTGAGTTAAAGGAGCGAGAGAAGGAGATCCGGTTCGCGGTCTTGGAAGCCAAAGACTCGGAATTGAACTCGGCTCTGGCGGCCAAGGGCAGGGAATTTGAGGAACTTGTGCAGGAGGTTGAAGAAGGTACGTCCCTATTGCAGTCTGTTAAGTTATCTTTCGACAAATATTTGGTTGAAGAAGGTAGATTAGGAGAATTACAGAACTTGGTTAAGGGTAAGGAGATGGAGTATTACAAGACACAACATCGGATGAAAGAATTGTCGAAAGAGATTGAGTCAAAGGAGCGGCAGTTAAATGCGGTTAGGGGTAAGGTTGCGGATCAATGGAAAGAGTTTGATTTGAGAGACGACGAAATTAGAGCTAAGCAAATATTGATTGAGGAATACGACAAAGAGACGAAGTCAAGAGAGCATAAACTCGGTTTGATTGAGAAATTAATAGTAGAAAAAACGAATGTATTTCAATCGAAAATGAAGGATTTGTGTGAGCTTCAGAAGTCGACAGGGGTGTGGGACTGTAAACTTGAATTGGAACTTAAAAGACGTGTTGAGAAGGTCGAAAAACAATTTGAGTCAAAAGCTGACGAACTTAATTTGATTGACGGGAGGGTCAATGATTGCCTCAATGAGTGTCAGTTGAAAGAAAAGAATTTGGATTCCCGCAAAAGGCATTTGGATTCAGTCGACAAGTTGATACAGGAATCTGTGAGGCAGCTTGAACAAAAGACCAAAGAGCTTGAATTGAAGCAACAAGAATTTGAAAAATCCAAAGAACATATTTGCACAAATAAATCGAAGGAGAAGACTGATATATGTCATACTCAAGTGAAGATTGAACAATCAGGAGATATCCCTGATAACATTGCCGTCCCTCCTTTTTGTGCAACCAATAATTCAAGAATCATTAGGGATGGTAGGAGCTTGCAGTTTTTCATGAATGATTATTTTAGGAGAACGGATTCAGTTTCTATCCAAGTTTCAGCCTGTCTTCAATTGTCATCAGACCCAGCAAAATTAGTTCTTGATGCTATGCAAGGGTTTTACCCTTCAAATTCGACTGTGGAAAACAGGGAATTTGATTTTGATTTGAGTGTAATTAGAAGGAGCTGTATTCATTTGTTAAAGGAGGTAAAGAGAGTCTCACCACAAATTAGTGAACAGGTGAGAGCAGAAGCAAAGAGGTTGGCGGGTGAATGGAGAGCTAAGATGACTGTGGTGGCTGAGAATTGGTTGGAGGTTTTGGGTTTTTTGTGGCTTGTTATGGCATATGACTTGAACTCTATTTCTGACAGGGAGGAGCTTCAGTCTCTTCTCAGTATAGCCGCTGATCACGAAAAACTGTCAGATGAACTGTACGGGATCCTTGACACTGCAGATAACACACCTGCGAGCAGCAACCTTTGTTCCTCTATCAAAACTGATAAACCAGAATCTCCGCTGGGAAAGAATGCCGCAACTTGTTCTTCTCCAAATCTTGAACTAACTGCCACCACAGATGCTAGGAATTTGCAGGGGGGTCCAACTTTTTCTTCTCCAAATCTTCGTCAAACTGCCACCACAGATGCTAGGAATTTCCAGTGGTTATCAAATGAGCATTCTAGTGGGAATCACTCAATACAGAATGAATTTTTACAGATTGACAAGTTGTTTTCTGTGTTAAATGGAGAAGAGTTAGTAAATTATCTCGGGTTGATTTCGCAGAATAAACAGGCCCTAGAATATATTTGGAGTTCTGGTTGTGGAGATAAGATCCCTGATGCTATTCCGACTCTTATTGAATGGGGGCAACGGATTGAGGCTGTTAGGGTTATTTGCACCTTCAACTTAATTGACAAGTTTCCCCCGGGACCCCTCTTGAAAGAACATGTGGAGATTGCGAGGAAGCGTTCCCAGTCACTTATCTTGAAAAAAAAACTACTTGGTGACGAGATTAAGGTTGTAAACGAAGAAATAGCTGATCTAAGAGCTGTGAGTGAATGCATTAGAGATTACGATCTAGAGTCGGAGTACTCCCCCCAGGCTATTGAAACAAAAATAGCGAAGCTGCAGAAACAAAAGGACGAGTTGATACAGAAGCGTCTGGCGCCATGTCACAAGGTTAAACAACCGCGGAAAAAGAAGAATAAACGCACTGCCAAGTTTCAAGCACAACAGTTTAAATCTAAACGTCAGCGGGCATCAATATCAGCTTCCCCACCACATCCAAAACCAAATCCCACCCCTGGATATGTATCGCCTTGCCGCTGTCATATTTGCCGTACGAAAACATTCGACACCCCCGGCAATTTGGTATGGCTGCCAACGACGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida TEX13

Protein Analysis

894

Amino Acids

102.23

Weight (kDa)

6.42

Isoelectric Point (pI)

53.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 333
AarI CACCTGC 1 cut(s) 1765
AasI GACNNNNNNGTC 2 cut(s) 53, 980
Acc36I ACCTGC 1 cut(s) 1765
AccB1I GGYRCC 1 cut(s) 2455
AccBSI CCGCTC 2 cut(s) 106, 658
AccI GTMKAC 3 cut(s) 57, 872, 1056
AccII CGCG 2 cut(s) 407, 2482
AclWI GGATC 5 cut(s) 391, 699, 1726, 1739, 2116
AcoI YGGCCR 1 cut(s) 450
AcsI RAATTY 9 cut(s) 158, 464, 1021, 1127, 1423, 1445, 1876, 1942, 1997
AcuI CTGAAG 3 cut(s) 53, 848, 1658
AcyI GRCGYC 1 cut(s) 2456
AfaI GTAC 4 cut(s) 499, 1727, 2381, 2632
AfiI CCNNNNNNNGG 5 cut(s) 106, 406, 459, 1038, 2594
AflIII ACRYGT 2 cut(s) 916, 2236
AjiI CACGTC 2 cut(s) 55, 917
AjnI CCWGG 4 cut(s) 42, 99, 2388, 2593
AjuI GAANNNNNNNTTGG 2 cut(s) 1885, 1917
AloI GAACNNNNNNTCC 2 cut(s) 386, 418
Alw26I GTCTC 6 cut(s) 76, 129, 711, 761, 1516, 1683
AlwI GGATC 5 cut(s) 391, 699, 1726, 1739, 2116
Ama87I CYCGRG 2 cut(s) 2057, 2215
AoxI GGCC 2 cut(s) 450, 2082
ApeKI GCWGC 4 cut(s) 1084, 1764, 2416, 2668
ApoI RAATTY 9 cut(s) 158, 464, 1021, 1127, 1423, 1445, 1876, 1942, 1997
AseI ATTAAT 1 cut(s) 809
Asp700I GAANNNNTTC 2 cut(s) 1330, 2639
AspLEI GCGC 1 cut(s) 2458
AspS9I GGNCC 4 cut(s) 40, 1889, 2083, 2219
AsuC2I CCSGG 3 cut(s) 2216, 2217, 2652
AsuHPI GGTGA 5 cut(s) 190, 1506, 1546, 1574, 2306
AsuII TTCGAA 2 cut(s) 26, 258
AvaI CYCGRG 2 cut(s) 2057, 2215
AvaII GGWCC 3 cut(s) 40, 1889, 2219
BamHI GGATCC 1 cut(s) 1731
BanI GGYRCC 1 cut(s) 2455
BanII GRGCYC 1 cut(s) 99
BbsI GAAGAC 2 cut(s) 1181, 1352
BbvI GCAGC 4 cut(s) 1096, 1776, 2403, 2655
BccI CCATC 3 cut(s) 166, 589, 1277
BceAI ACGGC 2 cut(s) 1223, 2613
BcgI CGANNNNNNTGC 2 cut(s) 135, 169
BciT130I CCWGG 4 cut(s) 44, 101, 2390, 2595
BclI TGATCA 1 cut(s) 1699
BcnI CCSGG 3 cut(s) 2216, 2217, 2652
BcoDI GTCTC 6 cut(s) 76, 129, 711, 761, 1516, 1683
BfaI CTAG 5 cut(s) 1872, 1938, 1971, 2087, 2369
BfmI CTRYAG 2 cut(s) 1743, 2417
BfoI RGCGCY 1 cut(s) 2459
BfuAI ACCTGC 1 cut(s) 1765
BlpI GCTNAGC 1 cut(s) 735
BmcAI AGTACT 1 cut(s) 2381
Bme1390I CCNGG 7 cut(s) 44, 101, 2216, 2217, 2390, 2595, 2652
Bme18I GGWCC 3 cut(s) 40, 1889, 2219
BmeT110I CYCGRG 2 cut(s) 2057, 2215
BmgBI CACGTC 2 cut(s) 55, 917
BmgT120I GGNCC 4 cut(s) 40, 1889, 2083, 2219
BmiI GGNNCC 6 cut(s) 98, 1733, 1890, 2220, 2221, 2457
BmrFI CCNGG 7 cut(s) 44, 101, 2216, 2217, 2390, 2595, 2652
BmrI ACTGGG 2 cut(s) 226, 2257
BmsI GCATC 5 cut(s) 1387, 1858, 1924, 2119, 2558
BmuI ACTGGG 2 cut(s) 226, 2257
BpiI GAAGAC 2 cut(s) 1181, 1352
BpmI CTGGAG 1 cut(s) 122
Bpu1102I GCTNAGC 1 cut(s) 735
Bpu14I TTCGAA 2 cut(s) 26, 258
BpuEI CTTGAG 1 cut(s) 1179
BpuMI CCSGG 3 cut(s) 2216, 2217, 2652
BsaBI GATNNNNATC 2 cut(s) 2364, 2602
BsaHI GRCGYC 1 cut(s) 2456
BsaI GGTCTC 2 cut(s) 76, 129
BsaJI CCNNGG 7 cut(s) 453, 2214, 2215, 2388, 2480, 2593, 2650
BsaWI WCCGGW 1 cut(s) 399
Bsc4I CCNNNNNNNGG 5 cut(s) 106, 406, 459, 1038, 2594
Bse1I ACTGG 3 cut(s) 232, 1948, 2263
Bse3DI GCAATG 1 cut(s) 1233
Bse8I GATNNNNATC 2 cut(s) 2364, 2602
BseBI CCWGG 4 cut(s) 44, 101, 2390, 2595
BseDI CCNNGG 7 cut(s) 453, 2214, 2215, 2388, 2480, 2593, 2650
BseGI GGATG 4 cut(s) 354, 627, 1288, 2572
BseJI GATNNNNATC 2 cut(s) 2364, 2602
BseLI CCNNNNNNNGG 5 cut(s) 106, 406, 459, 1038, 2594
BseMI GCAATG 1 cut(s) 1233
BseMII CTCAG 2 cut(s) 1584, 1699
BseNI ACTGG 3 cut(s) 232, 1948, 2263
BseRI GAGGAG 1 cut(s) 1682
BseXI GCAGC 4 cut(s) 1096, 1776, 2403, 2655
BseYI CCCAGC 2 cut(s) 1378, 1810
BsgI GTGCAG 1 cut(s) 500
Bsh1236I CGCG 2 cut(s) 407, 2482
BshFI GGCC 2 cut(s) 452, 2084
BshNI GGYRCC 1 cut(s) 2455
BsiHKCI CYCGRG 2 cut(s) 2057, 2215
BsiSI CCGG 3 cut(s) 400, 2216, 2652
BsiWI CGTACG 1 cut(s) 2630
BslFI GGGAC 5 cut(s) 214, 487, 899, 1226, 2232
BslI CCNNNNNNNGG 5 cut(s) 106, 406, 459, 1038, 2594
BsmAI GTCTC 6 cut(s) 76, 129, 711, 761, 1516, 1683
BsmBI CGTCTC 2 cut(s) 711, 761
BsmFI GGGAC 5 cut(s) 214, 487, 899, 1226, 2232
BsmI GAATGC 4 cut(s) 86, 1825, 1966, 2354
BsnI GGCC 2 cut(s) 452, 2084
Bso31I GGTCTC 2 cut(s) 76, 129
BsoBI CYCGRG 2 cut(s) 2057, 2215
Bsp119I TTCGAA 2 cut(s) 26, 258
Bsp1286I GDGCHC 1 cut(s) 99
Bsp143I GATC 8 cut(s) 117, 396, 691, 1699, 1731, 2121, 2329, 2365
Bsp1720I GCTNAGC 1 cut(s) 735
BspANI GGCC 2 cut(s) 452, 2084
BspCNI CTCAG 2 cut(s) 1585, 1698
BspFNI CGCG 2 cut(s) 407, 2482
BspHI TCATGA 1 cut(s) 1305
BspLI GGNNCC 6 cut(s) 98, 1733, 1890, 2220, 2221, 2457
BspMAI CTGCAG 2 cut(s) 1747, 2421
BspMI ACCTGC 1 cut(s) 1765
BspPI GGATC 5 cut(s) 391, 699, 1726, 1739, 2116
BspT104I TTCGAA 2 cut(s) 26, 258
BspT107I GGYRCC 1 cut(s) 2455
BspTNI GGTCTC 2 cut(s) 76, 129
BsrBI CCGCTC 2 cut(s) 106, 658
BsrDI GCAATG 1 cut(s) 1233
BsrI ACTGG 3 cut(s) 232, 1948, 2263
BssECI CCNNGG 7 cut(s) 453, 2214, 2215, 2388, 2480, 2593, 2650
BssMI GATC 8 cut(s) 117, 396, 691, 1699, 1731, 2121, 2329, 2365
BssNI GRCGYC 1 cut(s) 2456
BssT1I CCWWGG 1 cut(s) 453
Bst2UI CCWGG 4 cut(s) 44, 101, 2390, 2595
Bst4CI ACNGT 6 cut(s) 890, 1432, 1585, 1713, 1725, 2526
Bst6I CTCTTC 3 cut(s) 9, 1686, 2034
BstACI GRCGYC 1 cut(s) 2456
BstBI TTCGAA 2 cut(s) 26, 258
BstC8I GCNNGC 3 cut(s) 1295, 1762, 2547
BstDEI CTNAG 5 cut(s) 735, 1575, 1593, 1685, 2333
BstDSI CCRYGG 1 cut(s) 2480
BstF5I GGATG 4 cut(s) 354, 627, 1288, 2572
BstFNI CGCG 2 cut(s) 407, 2482
BstH2I RGCGCY 1 cut(s) 2459
BstHHI GCGC 1 cut(s) 2458
BstKTI GATC 8 cut(s) 120, 399, 694, 1702, 1734, 2124, 2332, 2368
BstMAI GTCTC 6 cut(s) 76, 129, 711, 761, 1516, 1683
BstMBI GATC 8 cut(s) 117, 396, 691, 1699, 1731, 2121, 2329, 2365
BstMWI GCNNNNNNNGC 3 cut(s) 103, 449, 2455
BstNI CCWGG 4 cut(s) 44, 101, 2390, 2595
BstNSI RCATGY 1 cut(s) 2240
BstSCI CCNGG 7 cut(s) 42, 99, 2214, 2215, 2388, 2593, 2650
BstSFI CTRYAG 2 cut(s) 1743, 2417
BstUI CGCG 2 cut(s) 407, 2482
BstV1I GCAGC 4 cut(s) 1096, 1776, 2403, 2655
BstV2I GAAGAC 2 cut(s) 1181, 1352
BstX2I RGATCY 3 cut(s) 396, 1731, 2121
BstYI RGATCY 3 cut(s) 396, 1731, 2121
BsuRI GGCC 2 cut(s) 452, 2084
BtgI CCRYGG 1 cut(s) 2480
BtgZI GCGATG 1 cut(s) 185
BtrI CACGTC 2 cut(s) 55, 917
BtsCI GGATG 4 cut(s) 354, 627, 1288, 2572
BtsI GCAGTG 2 cut(s) 1740, 2502
BtsIMutI CAGTG 3 cut(s) 1740, 1955, 2502
BveI ACCTGC 1 cut(s) 1765
Cac8I GCNNGC 3 cut(s) 1295, 1762, 2547
CciI TCATGA 1 cut(s) 1305
CfoI GCGC 1 cut(s) 2458
Cfr13I GGNCC 4 cut(s) 40, 1889, 2083, 2219
Cfr42I CCGCGG 1 cut(s) 2483
Cfr9I CCCGGG 1 cut(s) 2215
CseI GACGC 1 cut(s) 2438
Csp6I GTAC 4 cut(s) 498, 1726, 2380, 2631
CviAII CATG 3 cut(s) 1306, 2237, 2460
CviQI GTAC 4 cut(s) 498, 1726, 2380, 2631
DdeI CTNAG 5 cut(s) 735, 1575, 1593, 1685, 2333
DinI GGCGCC 1 cut(s) 2457
DpnI GATC 8 cut(s) 119, 398, 693, 1701, 1733, 2123, 2331, 2367
DpnII GATC 8 cut(s) 117, 396, 691, 1699, 1731, 2121, 2329, 2365
DraI TTTAAA 1 cut(s) 2530
DrdI GACNNNNNNGTC 2 cut(s) 53, 980
DseDI GACNNNNNNGTC 2 cut(s) 53, 980
EaeI YGGCCR 1 cut(s) 450
Eam1104I CTCTTC 3 cut(s) 9, 1686, 2034
EarI CTCTTC 3 cut(s) 9, 1686, 2034
Eco130I CCWWGG 1 cut(s) 453
Eco24I GRGCYC 1 cut(s) 99
Eco31I GGTCTC 2 cut(s) 76, 129
Eco32I GATATC 1 cut(s) 1222
Eco47I GGWCC 3 cut(s) 40, 1889, 2219
Eco57I CTGAAG 3 cut(s) 53, 848, 1658
Eco88I CYCGRG 2 cut(s) 2057, 2215
EcoO109I RGGNCCY 3 cut(s) 40, 2083, 2219
EcoRI GAATTC 1 cut(s) 158
EcoRII CCWGG 4 cut(s) 42, 99, 2388, 2593
EcoRV GATATC 1 cut(s) 1222
EcoT14I CCWWGG 1 cut(s) 453
EcoT22I ATGCAT 1 cut(s) 2354
EcoT38I GRGCYC 1 cut(s) 99
EgeI GGCGCC 1 cut(s) 2457
EheI GGCGCC 1 cut(s) 2457
ErhI CCWWGG 1 cut(s) 453
Esp3I CGTCTC 2 cut(s) 711, 761
FaeI CATG 3 cut(s) 1309, 2240, 2463
FaqI GGGAC 5 cut(s) 214, 487, 899, 1226, 2232
FatI CATG 3 cut(s) 1305, 2236, 2459
FauI CCCGC 5 cut(s) 99, 201, 1040, 1552, 2538
FauNDI CATATG 1 cut(s) 1639
FbaI TGATCA 1 cut(s) 1699
FblI GTMKAC 3 cut(s) 57, 872, 1056
FokI GGATG 4 cut(s) 361, 634, 1295, 2559
FriOI GRGCYC 1 cut(s) 99
FspBI CTAG 5 cut(s) 1872, 1938, 1971, 2087, 2369
GlaI GCGC 1 cut(s) 2457
GsaI CCCAGC 2 cut(s) 1382, 1814
GsuI CTGGAG 1 cut(s) 122
HaeII RGCGCY 1 cut(s) 2459
HaeIII GGCC 2 cut(s) 452, 2084
HapII CCGG 3 cut(s) 400, 2216, 2652
HgaI GACGC 1 cut(s) 2438
HhaI GCGC 1 cut(s) 2458
Hin1I GRCGYC 1 cut(s) 2456
Hin1II CATG 3 cut(s) 1309, 2240, 2463
Hin6I GCGC 1 cut(s) 2456
HinP1I GCGC 1 cut(s) 2456
HincII GTYRAC 3 cut(s) 58, 873, 1057
HindII GTYRAC 3 cut(s) 58, 873, 1057
HpaII CCGG 3 cut(s) 400, 2216, 2652
HphI GGTGA 5 cut(s) 190, 1506, 1546, 1574, 2306
Hpy166II GTNNAC 6 cut(s) 58, 873, 893, 1057, 1529, 2314
Hpy188I TCNGA 9 cut(s) 157, 430, 621, 867, 1375, 1660, 1717, 2139, 2377
Hpy8I GTNNAC 6 cut(s) 58, 873, 893, 1057, 1529, 2314
Hpy99I CGWCG 3 cut(s) 59, 725, 2680
HpyCH4III ACNGT 6 cut(s) 890, 1432, 1585, 1713, 1725, 2526
HpyCH4IV ACGT 5 cut(s) 54, 500, 916, 2539, 2678
HpyF10VI GCNNNNNNNGC 3 cut(s) 103, 449, 2455
HpyF3I CTNAG 5 cut(s) 735, 1575, 1593, 1685, 2333
HpySE526I ACGT 5 cut(s) 54, 500, 916, 2539, 2678
Hsp92I GRCGYC 1 cut(s) 2456
Hsp92II CATG 3 cut(s) 1309, 2240, 2463
HspAI GCGC 1 cut(s) 2456
KasI GGCGCC 1 cut(s) 2455
KflI GGGWCCC 1 cut(s) 2219
Ksp22I TGATCA 1 cut(s) 1699
KspI CCGCGG 1 cut(s) 2483
Kzo9I GATC 8 cut(s) 117, 396, 691, 1699, 1731, 2121, 2329, 2365
LmnI GCTCC 8 cut(s) 81, 102, 103, 382, 655, 1290, 1476, 1669
Lsp1109I GCAGC 4 cut(s) 1096, 1776, 2403, 2655
LweI GCATC 5 cut(s) 1387, 1858, 1924, 2119, 2558
MaeI CTAG 5 cut(s) 1872, 1938, 1971, 2087, 2369
MaeII ACGT 5 cut(s) 54, 500, 916, 2539, 2678
MaeIII GTNAC 3 cut(s) 2265, 2294, 2462
MalI GATC 8 cut(s) 119, 398, 693, 1701, 1733, 2123, 2331, 2367
MbiI CCGCTC 2 cut(s) 106, 658
MboI GATC 8 cut(s) 117, 396, 691, 1699, 1731, 2121, 2329, 2365
MfeI CAATTG 2 cut(s) 356, 1364
MflI RGATCY 3 cut(s) 396, 1731, 2121
MhlI GDGCHC 1 cut(s) 99
Mly113I GGCGCC 1 cut(s) 2456
MlyI GAGTC 9 cut(s) 53, 161, 173, 419, 656, 953, 1518, 2134, 2381
MmeI TCCRAC 5 cut(s) 135, 1584, 1916, 2162, 2355
Mph1103I ATGCAT 1 cut(s) 2354
MroXI GAANNNNTTC 2 cut(s) 1330, 2639
MslI CAYNNNNRTG 1 cut(s) 1971
MspA1I CMGCKG 5 cut(s) 1697, 1810, 2482, 2545, 2616
MspI CCGG 3 cut(s) 400, 2216, 2652
MspR9I CCNGG 7 cut(s) 44, 101, 2216, 2217, 2390, 2595, 2652
MunI CAATTG 2 cut(s) 356, 1364
Mva1269I GAATGC 4 cut(s) 86, 1825, 1966, 2354
MvaI CCWGG 4 cut(s) 44, 101, 2390, 2595
MvnI CGCG 2 cut(s) 407, 2482
MwoI GCNNNNNNNGC 3 cut(s) 103, 449, 2455
NarI GGCGCC 1 cut(s) 2456
NciI CCSGG 3 cut(s) 2216, 2217, 2652
NdeI CATATG 1 cut(s) 1639
NdeII GATC 8 cut(s) 117, 396, 691, 1699, 1731, 2121, 2329, 2365
NlaIII CATG 3 cut(s) 1309, 2240, 2463
NlaIV GGNNCC 6 cut(s) 98, 1733, 1890, 2220, 2221, 2457
NmeAIII GCCGAG 1 cut(s) 419
NmuCI GTSAC 3 cut(s) 2265, 2294, 2462
NsiI ATGCAT 1 cut(s) 2354
NspI RCATGY 1 cut(s) 2240
NspV TTCGAA 2 cut(s) 26, 258
PagI TCATGA 1 cut(s) 1305
PaqCI CACCTGC 1 cut(s) 1765
PciI ACATGT 1 cut(s) 2236
PcsI WCGNNNNNNNCGW 3 cut(s) 54, 60, 87
PctI GAATGC 4 cut(s) 86, 1825, 1966, 2354
PdmI GAANNNNTTC 2 cut(s) 1330, 2639
PfeI GAWTC 8 cut(s) 129, 1028, 1049, 1073, 1272, 1331, 1802, 1978
Pfl23II CGTACG 1 cut(s) 2630
PflFI GACNNNGTC 3 cut(s) 53, 62, 772
PfoI TCCNGGA 1 cut(s) 99
PleI GAGTC 9 cut(s) 53, 160, 172, 419, 655, 952, 1517, 2134, 2380
PluTI GGCGCC 1 cut(s) 2459
PpsI GAGTC 9 cut(s) 53, 160, 172, 419, 655, 952, 1517, 2134, 2380
PpuMI RGGWCCY 2 cut(s) 40, 2219
PscI ACATGT 1 cut(s) 2236
PshBI ATTAAT 1 cut(s) 809
PsiI TTATAA 1 cut(s) 333
Psp5II RGGWCCY 2 cut(s) 40, 2219
Psp6I CCWGG 4 cut(s) 42, 99, 2388, 2593
PspFI CCCAGC 2 cut(s) 1378, 1810
PspGI CCWGG 4 cut(s) 42, 99, 2388, 2593
PspLI CGTACG 1 cut(s) 2630
PspN4I GGNNCC 6 cut(s) 98, 1733, 1890, 2220, 2221, 2457
PspPI GGNCC 4 cut(s) 40, 1889, 2083, 2219
PspPPI RGGWCCY 2 cut(s) 40, 2219
PstI CTGCAG 2 cut(s) 1747, 2421
PsuI RGATCY 3 cut(s) 396, 1731, 2121
PsyI GACNNNGTC 3 cut(s) 53, 62, 772
RsaI GTAC 4 cut(s) 499, 1727, 2381, 2632
RsaNI GTAC 4 cut(s) 498, 1726, 2380, 2631
RseI CAYNNNNRTG 1 cut(s) 1971
SacII CCGCGG 1 cut(s) 2483
SalI GTCGAC 3 cut(s) 56, 871, 1055
Sau3AI GATC 8 cut(s) 117, 396, 691, 1699, 1731, 2121, 2329, 2365
Sau96I GGNCC 4 cut(s) 40, 1889, 2083, 2219
ScaI AGTACT 1 cut(s) 2381
SchI GAGTC 9 cut(s) 53, 161, 173, 419, 656, 953, 1518, 2134, 2381
ScrFI CCNGG 7 cut(s) 44, 101, 2216, 2217, 2390, 2595, 2652
SduI GDGCHC 1 cut(s) 99
SfaNI GCATC 5 cut(s) 1387, 1858, 1924, 2119, 2558
SfcI CTRYAG 2 cut(s) 1743, 2417
SfoI GGCGCC 1 cut(s) 2457
Sfr303I CCGCGG 1 cut(s) 2483
SfuI TTCGAA 2 cut(s) 26, 258
SgrBI CCGCGG 1 cut(s) 2483
SinI GGWCC 3 cut(s) 40, 1889, 2219
SmaI CCCGGG 1 cut(s) 2217
SmiMI CAYNNNNRTG 1 cut(s) 1971
SmlI CTYRAG 1 cut(s) 1194
SmoI CTYRAG 1 cut(s) 1194
SspDI GGCGCC 1 cut(s) 2455
SspI AATATT 2 cut(s) 539, 744
SspMI CTAG 5 cut(s) 1872, 1938, 1971, 2087, 2369
StyD4I CCNGG 7 cut(s) 42, 99, 2214, 2215, 2388, 2593, 2650
StyI CCWWGG 1 cut(s) 453
TaaI ACNGT 6 cut(s) 890, 1432, 1585, 1713, 1725, 2526
TaiI ACGT 5 cut(s) 57, 503, 919, 2542, 2681
TatI WGTACW 1 cut(s) 2379
TauI GCSGC 6 cut(s) 86, 452, 661, 1697, 1826, 2616
TfiI GAWTC 8 cut(s) 129, 1028, 1049, 1073, 1272, 1331, 1802, 1978
TscAI CASTG 3 cut(s) 1747, 1955, 2509
TseFI GTSAC 3 cut(s) 2265, 2294, 2462
TseI GCWGC 4 cut(s) 1084, 1764, 2416, 2668
Tsp45I GTSAC 3 cut(s) 2265, 2294, 2462
TspDTI ATGAA 8 cut(s) 365, 638, 860, 1294, 1322, 1475, 1734, 2010
TspGWI ACGGA 4 cut(s) 52, 361, 1343, 2176
TspMI CCCGGG 1 cut(s) 2215
TspRI CASTG 3 cut(s) 1747, 1955, 2509
Tth111I GACNNNGTC 3 cut(s) 53, 62, 772
VpaK11BI GGWCC 3 cut(s) 40, 1889, 2219
VspI ATTAAT 1 cut(s) 809
XapI RAATTY 9 cut(s) 158, 464, 1021, 1127, 1423, 1445, 1876, 1942, 1997
XbaI TCTAGA 1 cut(s) 2368
XceI RCATGY 1 cut(s) 2240
XmaI CCCGGG 1 cut(s) 2215
XmiI GTMKAC 3 cut(s) 57, 872, 1056
XmnI GAANNNNTTC 2 cut(s) 1330, 2639
XspI CTAG 5 cut(s) 1872, 1938, 1971, 2087, 2369
ZrmI AGTACT 1 cut(s) 2381
Zsp2I ATGCAT 1 cut(s) 2354
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.