RLG00000025544

FRIGIDA-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0000126
Physical Location & Seq
Reverse (-)
46572845 .. 46576163
3319 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000025544

Sequence Viewer

Length: 1989 bp
ATGGAGGAGGTAGTCTTGGATATGGAAGAATGGGAGTTGAAGCAGAGTAATCTCGAAAAGGCCTTTGAGAATTGTCATTCCCGCTGTAAGAAGGTTGAAGAGCACTTCAACTCAACCCGGAGTTCGTTCCAGACTCAATTCCAAGAGCTCAAGACCAGGGAGGAGGAAATCGGGCTCCGAGAGAAGCAGTTGGAAGAGAAAGAGTCCTATTTTGAGTCCCTGAGGGAATCTAAGGAGGAGGAGTTAGATGCAATTGAGGAGGTGATTATAGAGAAGCGAATACAAGTTGAACAAGTTAAGACTGAGTTGGAGTGTAAGCTTGATAGTAAAGAGAAGCGGTTTTTGGAAGTTGAGAAGTTGGTTAGAGAAAATGAGAGGGAGTGTGATTTGATCCAAAACCGTATTGAAGAGGGGACGGCGAATTTGACGAGGATTGAGAAAGTTATTGGGGAAATGGATGTGAAAGTGAAAAGTTTTAAATTGCTTGAGAAATCCATGGAGGATTGGTGCCATAAGCTTGACTTGAAAAAGAAGGAACTTGAAGGATTCTCTGAGAACCTTGCATTGAAAAAAGAGTTATTGAATCAAACTATTCGAGAACTTCATTTTATTGCTGACAGGGTCAAATACTGCCTCAATGAAGTTCAAAGGAAAGAGAGGGAACTTGAACTGAAAGAGACACAAGTTGAATCAAAAGTTGAGGAGCTTCAGTTGACAGACATGAGGGTCAACGAACGCCTCAATGAGGTTGAATTGAAAGAAAAGCATTTTTATTTGCTGGAGAAGTCAGTACAAGAAGAGAAACAACATTTGGTGGCGCTCATAAAGAATGCCGAAGAAAGTGAAAAGCATTTGGATTCACTCCAAAAGTTGGTGGAAGAGGGCGAAAAGGACATGGATTCACTCTCACATGAACTTGAAAGGGAAGTGAGGGAACTTGACCAACAGGTCAAAGACCTTGAATTGATGCAGACACAGTTTGATTGTCTATTGAACACGGAGCAATCAGAACATGCTTCTGGGGCTACCAACGAGGCTATTCCTTCATCTGGTAACAATGTGACCAACATCATTCCTTCCCTTGCCAATATGGAGGAACCAGAATCTTCACTAGCTAGAAATGCAAAAACTTTTCTTTCTTCCAATCTTCAACCACATGCCACCAACGAGGAAAGGAATGTGCCTGCAGGGTTTCTAGAGGATAATAAGAGTGGGCATGATTCCTCACAGAATGAATTGGCTGCTTCTCTTCTGTTGGTACCAGACCCAGCTAAACTAGTGTTGAATAACATGCAAAAATCTCTTGCTAGATACTTAAGAAATGGAGAGTTTGAAGATAGTATCATGTCGAGTAACATTTTCATATTGAAAGAGCTAATGATTGTTTCGCCACTTGTTGGATCTCATCTGAGAGCAGATTCAACAACTTTAGCAGCCCAGTGGAAAGAGAAGATGAGAGGCAAGACTGTAAATTCAGAGGAAAGTTTAGTATTTTTGCTGTTTATTGCTATGTATGGATTGGTTTCGATTTTAAATGTAGATGAGATTGTAAAGCTTCTTGGGTTGATTTCTCAGAATGAAAAAGCTCTAGAATTGTATTTCATTCTGATTTTGATACAAAAGAAGCATATAACTGAGGCTGTCAGATTTATTTGCACCTTCAAGTTAATTGATAAGCTACCGCCAATACCACTCTTGAAAGAATATGTGGAGGATGCAAAGAAGTGTTTTGAAGTACTTTGCAGGATAAGGATTGCTCTTGCTGAAAAGGTTAAGGCTGTAGAAAACCTAATAGGTTATCTAAGAGCTGTGCACCAATGCATCAAAGATTATAATCTCGAGTCCGAATTCCCATCTACAGACATTGAAATGCAATTAGTTCGACTGGAAAAACTGAAGGTGAATTGGAGAATTTTGGCGCCATCTGTTGGTTCTAATGATAAGCAAAAAGAGCAGAGAAAAAGGAAAGAACCTGATACCAAGAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida

Protein Analysis

663

Amino Acids

76.98

Weight (kDa)

5.15

Isoelectric Point (pI)

46.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 398 - 635 2.5e-38 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1833
AasI GACNNNNNNGTC 2 cut(s) 725, 947
Acc65I GGTACC 1 cut(s) 1258
AccB1I GGYRCC 3 cut(s) 507, 1258, 1918
AccB7I CCANNNNNTGG 3 cut(s) 871, 1397, 1928
AciI CCGC 3 cut(s) 82, 337, 1682
AclWI GGATC 2 cut(s) 385, 1408
AcsI RAATTY 4 cut(s) 421, 1471, 1847, 1911
AcuI CTGAAG 2 cut(s) 692, 1916
AcyI GRCGYC 1 cut(s) 1919
AfaI GTAC 3 cut(s) 792, 1260, 1737
AfiI CCNNNNNNNGG 5 cut(s) 745, 871, 1049, 1397, 1928
AflII CTTAAG 1 cut(s) 1315
AhlI ACTAGT 1 cut(s) 1276
AjnI CCWGG 1 cut(s) 155
AjuI GAANNNNNNNTTGG 4 cut(s) 326, 358, 794, 826
Alw21I GWGCWC 3 cut(s) 105, 150, 1815
Alw26I GTCTC 1 cut(s) 671
Alw44I GTGCAC 1 cut(s) 1811
AlwI GGATC 2 cut(s) 385, 1408
Ama87I CYCGRG 1 cut(s) 1838
AoxI GGCC 1 cut(s) 60
ApaLI GTGCAC 1 cut(s) 1811
ApeKI GCWGC 2 cut(s) 1241, 1433
ApoI RAATTY 4 cut(s) 421, 1471, 1847, 1911
ArsI GACNNNNNNTTYG 2 cut(s) 406, 438
Asp718I GGTACC 1 cut(s) 1258
AspLEI GCGC 2 cut(s) 820, 1921
AsuC2I CCSGG 1 cut(s) 118
AsuHPI GGTGA 2 cut(s) 274, 1912
AvaI CYCGRG 1 cut(s) 1838
AxyI CCTNAGG 1 cut(s) 221
BaeGI GKGCMC 1 cut(s) 1815
BanI GGYRCC 3 cut(s) 507, 1258, 1918
BanII GRGCYC 2 cut(s) 150, 177
Bbv12I GWGCWC 3 cut(s) 105, 150, 1815
BbvI GCAGC 2 cut(s) 1228, 1445
BccI CCATC 2 cut(s) 1861, 1930
BceAI ACGGC 1 cut(s) 432
BcgI CGANNNNNNTGC 2 cut(s) 1862, 1896
BciT130I CCWGG 1 cut(s) 157
BcnI CCSGG 1 cut(s) 118
BcoDI GTCTC 1 cut(s) 671
BcuI ACTAGT 1 cut(s) 1276
BfaI CTAG 6 cut(s) 1112, 1116, 1196, 1277, 1308, 1589
BfmI CTRYAG 3 cut(s) 1185, 1779, 1857
BfoI RGCGCY 2 cut(s) 821, 1922
BfrI CTTAAG 1 cut(s) 1315
BisI GCNGC 2 cut(s) 1242, 1434
BlsI GCNGC 2 cut(s) 1243, 1435
BmcAI AGTACT 1 cut(s) 1737
Bme1390I CCNGG 2 cut(s) 118, 157
BmeT110I CYCGRG 1 cut(s) 1838
BmiI GGNNCC 5 cut(s) 176, 509, 1098, 1260, 1920
BmrFI CCNGG 2 cut(s) 118, 157
BmrI ACTGGG 1 cut(s) 1432
BmsI GCATC 4 cut(s) 238, 957, 1705, 1830
BmuI ACTGGG 1 cut(s) 1432
BpmI CTGGAG 1 cut(s) 800
BpuEI CTTGAG 2 cut(s) 134, 506
BpuMI CCSGG 1 cut(s) 118
BsaBI GATNNNNATC 1 cut(s) 1833
BsaHI GRCGYC 1 cut(s) 1919
BsaJI CCNNGG 2 cut(s) 156, 495
BsaXI ACNNNNNCTCC 6 cut(s) 227, 257, 491, 521, 695, 725
Bsc4I CCNNNNNNNGG 5 cut(s) 745, 871, 1049, 1397, 1928
Bse1I ACTGG 2 cut(s) 1438, 1890
Bse21I CCTNAGG 1 cut(s) 221
Bse8I GATNNNNATC 1 cut(s) 1833
BseBI CCWGG 1 cut(s) 157
BseDI CCNNGG 2 cut(s) 156, 495
BseGI GGATG 2 cut(s) 463, 1720
BseJI GATNNNNATC 1 cut(s) 1833
BseLI CCNNNNNNNGG 5 cut(s) 745, 871, 1049, 1397, 1928
BseMII CTCAG 6 cut(s) 212, 294, 543, 1400, 1586, 1626
BseNI ACTGG 2 cut(s) 1438, 1890
BseRI GAGGAG 6 cut(s) 20, 176, 251, 254, 272, 716
BseSI GKGCMC 1 cut(s) 1815
BseXI GCAGC 2 cut(s) 1228, 1445
BseYI CCCAGC 1 cut(s) 1267
BshFI GGCC 1 cut(s) 62
BshNI GGYRCC 3 cut(s) 507, 1258, 1918
BsiHKAI GWGCWC 3 cut(s) 105, 150, 1815
BsiHKCI CYCGRG 1 cut(s) 1838
BsiSI CCGG 1 cut(s) 118
BslFI GGGAC 2 cut(s) 202, 427
BslI CCNNNNNNNGG 5 cut(s) 745, 871, 1049, 1397, 1928
BsmAI GTCTC 1 cut(s) 671
BsmFI GGGAC 2 cut(s) 202, 427
BsmI GAATGC 1 cut(s) 835
BsnI GGCC 1 cut(s) 62
BsoBI CYCGRG 1 cut(s) 1838
Bsp1286I GDGCHC 4 cut(s) 105, 150, 177, 1815
Bsp143I GATC 2 cut(s) 390, 1400
Bsp19I CCATGG 1 cut(s) 495
BspACI CCGC 3 cut(s) 82, 337, 1682
BspANI GGCC 1 cut(s) 62
BspCNI CTCAG 6 cut(s) 213, 295, 544, 1401, 1585, 1627
BspLI GGNNCC 5 cut(s) 176, 509, 1098, 1260, 1920
BspMAI CTGCAG 1 cut(s) 1189
BspPI GGATC 2 cut(s) 385, 1408
BspQI GCTCTTC 1 cut(s) 93
BspT107I GGYRCC 3 cut(s) 507, 1258, 1918
BspTI CTTAAG 1 cut(s) 1315
BsrI ACTGG 2 cut(s) 1438, 1890
BssECI CCNNGG 2 cut(s) 156, 495
BssMI GATC 2 cut(s) 390, 1400
BssNI GRCGYC 1 cut(s) 1919
BssT1I CCWWGG 1 cut(s) 495
Bst2UI CCWGG 1 cut(s) 157
Bst4CI ACNGT 3 cut(s) 401, 978, 1468
Bst6I CTCTTC 6 cut(s) 93, 189, 402, 792, 873, 1254
BstACI GRCGYC 1 cut(s) 1919
BstAFI CTTAAG 1 cut(s) 1315
BstC8I GCNNGC 1 cut(s) 1185
BstDEI CTNAG 8 cut(s) 221, 231, 303, 552, 1409, 1572, 1635, 1802
BstDSI CCRYGG 1 cut(s) 495
BstENI CCTNNNNNAGG 1 cut(s) 743
BstF5I GGATG 2 cut(s) 463, 1720
BstH2I RGCGCY 2 cut(s) 821, 1922
BstHHI GCGC 2 cut(s) 820, 1921
BstKTI GATC 2 cut(s) 393, 1403
BstMAI GTCTC 1 cut(s) 671
BstMBI GATC 2 cut(s) 390, 1400
BstMWI GCNNNNNNNGC 3 cut(s) 1022, 1121, 1951
BstNI CCWGG 1 cut(s) 157
BstNSI RCATGY 3 cut(s) 1016, 1160, 1294
BstSCI CCNGG 2 cut(s) 116, 155
BstSFI CTRYAG 3 cut(s) 1185, 1779, 1857
BstSLI GKGCMC 1 cut(s) 1815
BstV1I GCAGC 2 cut(s) 1228, 1445
BstX2I RGATCY 1 cut(s) 1400
BstYI RGATCY 1 cut(s) 1400
Bsu36I CCTNAGG 1 cut(s) 221
BsuRI GGCC 1 cut(s) 62
BtgI CCRYGG 1 cut(s) 495
BtsCI GGATG 2 cut(s) 463, 1720
BtsIMutI CAGTG 1 cut(s) 1445
Cac8I GCNNGC 1 cut(s) 1185
CfoI GCGC 2 cut(s) 820, 1921
Csp6I GTAC 3 cut(s) 791, 1259, 1736
CviAII CATG 9 cut(s) 496, 721, 895, 911, 1013, 1157, 1217, 1291, 1345
CviQI GTAC 3 cut(s) 791, 1259, 1736
DdeI CTNAG 8 cut(s) 221, 231, 303, 552, 1409, 1572, 1635, 1802
DinI GGCGCC 1 cut(s) 1920
DpnI GATC 2 cut(s) 392, 1402
DpnII GATC 2 cut(s) 390, 1400
DraI TTTAAA 2 cut(s) 478, 1533
DrdI GACNNNNNNGTC 2 cut(s) 725, 947
DseDI GACNNNNNNGTC 2 cut(s) 725, 947
Eam1104I CTCTTC 6 cut(s) 93, 189, 402, 792, 873, 1254
EarI CTCTTC 6 cut(s) 93, 189, 402, 792, 873, 1254
Ecl136II GAGCTC 1 cut(s) 148
Eco130I CCWWGG 1 cut(s) 495
Eco147I AGGCCT 1 cut(s) 62
Eco24I GRGCYC 2 cut(s) 150, 177
Eco53kI GAGCTC 1 cut(s) 148
Eco57I CTGAAG 2 cut(s) 692, 1916
Eco81I CCTNAGG 1 cut(s) 221
Eco88I CYCGRG 1 cut(s) 1838
EcoICRI GAGCTC 1 cut(s) 148
EcoNI CCTNNNNNAGG 1 cut(s) 743
EcoRI GAATTC 1 cut(s) 1847
EcoRII CCWGG 1 cut(s) 155
EcoT14I CCWWGG 1 cut(s) 495
EcoT22I ATGCAT 1 cut(s) 1823
EcoT38I GRGCYC 2 cut(s) 150, 177
EgeI GGCGCC 1 cut(s) 1920
EheI GGCGCC 1 cut(s) 1920
ErhI CCWWGG 1 cut(s) 495
FaeI CATG 9 cut(s) 499, 724, 898, 914, 1016, 1160, 1220, 1294, 1348
FalI AAGNNNNNCTT 2 cut(s) 506, 538
FaqI GGGAC 2 cut(s) 202, 427
FatI CATG 9 cut(s) 495, 720, 894, 910, 1012, 1156, 1216, 1290, 1344
FauI CCCGC 1 cut(s) 89
Fnu4HI GCNGC 2 cut(s) 1242, 1434
FokI GGATG 2 cut(s) 470, 1727
FriOI GRGCYC 2 cut(s) 150, 177
Fsp4HI GCNGC 2 cut(s) 1242, 1434
FspBI CTAG 6 cut(s) 1112, 1116, 1196, 1277, 1308, 1589
GlaI GCGC 2 cut(s) 819, 1920
GluI GCNGC 2 cut(s) 1242, 1434
GsaI CCCAGC 1 cut(s) 1271
GsuI CTGGAG 1 cut(s) 800
HaeII RGCGCY 2 cut(s) 821, 1922
HaeIII GGCC 1 cut(s) 62
HapII CCGG 1 cut(s) 118
HhaI GCGC 2 cut(s) 820, 1921
Hin1I GRCGYC 1 cut(s) 1919
Hin1II CATG 9 cut(s) 499, 724, 898, 914, 1016, 1160, 1220, 1294, 1348
Hin6I GCGC 2 cut(s) 818, 1919
HinP1I GCGC 2 cut(s) 818, 1919
HincII GTYRAC 2 cut(s) 714, 730
HindII GTYRAC 2 cut(s) 714, 730
HindIII AAGCTT 3 cut(s) 317, 515, 1553
HpaII CCGG 1 cut(s) 118
HphI GGTGA 2 cut(s) 274, 1912
Hpy166II GTNNAC 3 cut(s) 714, 730, 1813
Hpy188I TCNGA 9 cut(s) 179, 553, 1009, 1410, 1477, 1575, 1608, 1646, 1846
Hpy188III TCNNGA 8 cut(s) 53, 130, 151, 596, 1196, 1589, 1696, 1838
Hpy8I GTNNAC 3 cut(s) 714, 730, 1813
HpyAV CCTTC 7 cut(s) 85, 526, 536, 1053, 1086, 1669, 1891
HpyCH4III ACNGT 3 cut(s) 401, 978, 1468
HpyF10VI GCNNNNNNNGC 3 cut(s) 1022, 1121, 1951
HpyF3I CTNAG 8 cut(s) 221, 231, 303, 552, 1409, 1572, 1635, 1802
Hsp92I GRCGYC 1 cut(s) 1919
Hsp92II CATG 9 cut(s) 499, 724, 898, 914, 1016, 1160, 1220, 1294, 1348
HspAI GCGC 2 cut(s) 818, 1919
KasI GGCGCC 1 cut(s) 1918
KpnI GGTACC 1 cut(s) 1262
Kzo9I GATC 2 cut(s) 390, 1400
LguI GCTCTTC 1 cut(s) 93
LmnI GCTCC 3 cut(s) 180, 703, 1000
Lsp1109I GCAGC 2 cut(s) 1228, 1445
LweI GCATC 4 cut(s) 238, 957, 1705, 1830
MaeI CTAG 6 cut(s) 1112, 1116, 1196, 1277, 1308, 1589
MaeIII GTNAC 3 cut(s) 1052, 1060, 1352
MalI GATC 2 cut(s) 392, 1402
MboI GATC 2 cut(s) 390, 1400
MfeI CAATTG 1 cut(s) 252
MflI RGATCY 1 cut(s) 1400
MhlI GDGCHC 4 cut(s) 105, 150, 177, 1815
Mly113I GGCGCC 1 cut(s) 1919
MlyI GAGTC 4 cut(s) 127, 212, 224, 1850
MmeI TCCRAC 3 cut(s) 171, 288, 1378
Mph1103I ATGCAT 1 cut(s) 1823
MseI TTAA 7 cut(s) 297, 477, 1316, 1532, 1667, 1773, 1987
MslI CAYNNNNRTG 1 cut(s) 1868
MspA1I CMGCKG 1 cut(s) 84
MspCI CTTAAG 1 cut(s) 1315
MspI CCGG 1 cut(s) 118
MspR9I CCNGG 2 cut(s) 118, 157
MunI CAATTG 1 cut(s) 252
Mva1269I GAATGC 1 cut(s) 835
MvaI CCWGG 1 cut(s) 157
MwoI GCNNNNNNNGC 3 cut(s) 1022, 1121, 1951
NarI GGCGCC 1 cut(s) 1919
NciI CCSGG 1 cut(s) 118
NcoI CCATGG 1 cut(s) 495
NdeII GATC 2 cut(s) 390, 1400
NlaIII CATG 9 cut(s) 499, 724, 898, 914, 1016, 1160, 1220, 1294, 1348
NlaIV GGNNCC 5 cut(s) 176, 509, 1098, 1260, 1920
NmuCI GTSAC 1 cut(s) 1060
NsiI ATGCAT 1 cut(s) 1823
NspI RCATGY 3 cut(s) 1016, 1160, 1294
PaeR7I CTCGAG 1 cut(s) 1838
PceI AGGCCT 1 cut(s) 62
PciSI GCTCTTC 1 cut(s) 93
PctI GAATGC 1 cut(s) 835
PfeI GAWTC 9 cut(s) 227, 546, 583, 689, 857, 899, 1103, 1220, 1418
PflFI GACNNNGTC 1 cut(s) 620
PflMI CCANNNNNTGG 3 cut(s) 871, 1397, 1928
PkrI GCNGC 2 cut(s) 1243, 1435
PleI GAGTC 4 cut(s) 127, 211, 223, 1849
PluTI GGCGCC 1 cut(s) 1922
PpsI GAGTC 4 cut(s) 127, 211, 223, 1849
PsiI TTATAA 1 cut(s) 1833
Psp124BI GAGCTC 1 cut(s) 150
Psp6I CCWGG 1 cut(s) 155
PspFI CCCAGC 1 cut(s) 1267
PspGI CCWGG 1 cut(s) 155
PspN4I GGNNCC 5 cut(s) 176, 509, 1098, 1260, 1920
PstI CTGCAG 1 cut(s) 1189
PsuI RGATCY 1 cut(s) 1400
PsyI GACNNNGTC 1 cut(s) 620
RsaI GTAC 3 cut(s) 792, 1260, 1737
RsaNI GTAC 3 cut(s) 791, 1259, 1736
RseI CAYNNNNRTG 1 cut(s) 1868
SacI GAGCTC 1 cut(s) 150
SapI GCTCTTC 1 cut(s) 93
SaqAI TTAA 7 cut(s) 297, 477, 1316, 1532, 1667, 1773, 1987
SatI GCNGC 2 cut(s) 1242, 1434
Sau3AI GATC 2 cut(s) 390, 1400
SbfI CCTGCAGG 1 cut(s) 1189
ScaI AGTACT 1 cut(s) 1737
SchI GAGTC 4 cut(s) 127, 212, 224, 1850
ScrFI CCNGG 2 cut(s) 118, 157
SdaI CCTGCAGG 1 cut(s) 1189
SduI GDGCHC 4 cut(s) 105, 150, 177, 1815
SfaNI GCATC 4 cut(s) 238, 957, 1705, 1830
SfcI CTRYAG 3 cut(s) 1185, 1779, 1857
SfoI GGCGCC 1 cut(s) 1920
Sfr274I CTCGAG 1 cut(s) 1838
SlaI CTCGAG 1 cut(s) 1838
SmiMI CAYNNNNRTG 1 cut(s) 1868
SmlI CTYRAG 4 cut(s) 149, 485, 1315, 1838
SmoI CTYRAG 4 cut(s) 149, 485, 1315, 1838
SpeI ACTAGT 1 cut(s) 1276
Sse8387I CCTGCAGG 1 cut(s) 1189
SseBI AGGCCT 1 cut(s) 62
SsiI CCGC 3 cut(s) 82, 337, 1682
SspDI GGCGCC 1 cut(s) 1918
SspMI CTAG 6 cut(s) 1112, 1116, 1196, 1277, 1308, 1589
SstI GAGCTC 1 cut(s) 150
StuI AGGCCT 1 cut(s) 62
StyD4I CCNGG 2 cut(s) 116, 155
StyI CCWWGG 1 cut(s) 495
TaaI ACNGT 3 cut(s) 401, 978, 1468
TaqI TCGA 6 cut(s) 54, 595, 1349, 1526, 1839, 1882
TatI WGTACW 2 cut(s) 790, 1735
TfiI GAWTC 9 cut(s) 227, 546, 583, 689, 857, 899, 1103, 1220, 1418
Tru1I TTAA 7 cut(s) 297, 477, 1316, 1532, 1667, 1773, 1987
Tru9I TTAA 7 cut(s) 297, 477, 1316, 1532, 1667, 1773, 1987
TscAI CASTG 1 cut(s) 1445
TseFI GTSAC 1 cut(s) 1060
TseI GCWGC 2 cut(s) 1241, 1433
Tsp45I GTSAC 1 cut(s) 1060
TspDTI ATGAA 8 cut(s) 593, 654, 927, 1035, 1248, 1351, 1591, 1593
TspGWI ACGGA 1 cut(s) 1013
TspRI CASTG 1 cut(s) 1445
Tth111I GACNNNGTC 1 cut(s) 620
Van91I CCANNNNNTGG 3 cut(s) 871, 1397, 1928
Vha464I CTTAAG 1 cut(s) 1315
VneI GTGCAC 1 cut(s) 1811
XagI CCTNNNNNAGG 1 cut(s) 743
XapI RAATTY 4 cut(s) 421, 1471, 1847, 1911
XbaI TCTAGA 2 cut(s) 1195, 1588
XceI RCATGY 3 cut(s) 1016, 1160, 1294
XhoI CTCGAG 1 cut(s) 1838
XspI CTAG 6 cut(s) 1112, 1116, 1196, 1277, 1308, 1589
ZrmI AGTACT 1 cut(s) 1737
Zsp2I ATGCAT 1 cut(s) 1823
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.