RLG00000025553

Frigida-like protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
46642385 .. 46647249
4865 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000025553

Sequence Viewer

Length: 2943 bp
ATGGAGACTACGGCGGCGGGGTTGGAAGAAATATCGGAGGCGAAACAGAGGAGCCTAGGCGCGGCGTTTGAGTCGTTGAGTTCGCAAGCTTCGTCGATTCTGAAGTTTACGGTGGAGTGGAAGGAGCTGGAGGACCATTTCGAGTCGACCCGGAGGGTGCTCCGGACCCGGTTCGAGGAGGTGAGGGATCGCGTGAAGGCGGTGGCGGAGATGGAGGCGAAGGAGGAGAGGTTGAAGATGGAGGTGAAGGGGAGGGAGAAGGAGTTGGGGGAGATCGAGGAGGTGGTGGAGCGGAGGAGGAGGGAGGTGGAGGAAAGTGAGAGTTATTTGGAGTCTGTGAGGGCTTTGATTGTGGAGAATGATGAGGAGCTTAGGGTTAGGGAGGAGAGGTATGATAAAGTTGAGAGATTGATTAGGGAGAAGGAGAGGGAGGTGGAGGAGATAGAGAAGCATGTGAGAGAGAGGTCTAGGAAGTTGAGTTGGGTGGAGAAGAGAATAGAGGCGAAGAAGAAGGAGGTTGAGAGGAAGGAGAGGGAGTTGAGAGAGGTTAGGGATTTGGAGGAGAAGAAATTGAGTGGTGTTAGGGGGTTGATTGAGGAGAAGAGGAAGGAAGTTGAGTTGAAGGAAGATGAGATGATGATGGTGAAAAGGAGGGTTGAGGATTGTGATAGGGAAATGAAGGAGAAAGAGGAGAGGCTGAGATTGATTGAGAAATCGAAAGAGGAAATGATTGGTGTGGTGGATTTGAAAGGGAAAGATTTCTGTTTGCTGAAGAAATCAATGGAGGAGTGGTGCTGTAAGATTGAAGTCAAGGAGAGGGAGCTTGAAGCATGTGTTGATAAGTTGGAATCGAAAGAGAAGGAAGTTGAATTACACGTTGAGGAGCTTAATTTGATTCGTAATAAGCTCCTTGATGAGGTTCAGGCAAAAGAAAAGCATTTGGATTCGCTTGAAAAATTGTTACTAGAATGGGAGGAGGATCTGCATTCCCTCCAGAAGTCGGTACAAGAATGTTCCCGGGGAGGTGAGATCATTAGGGATGGAAGAGGATTGCAGCAGTTCATGGACGAGCATCTGAAGAGAATTGATTCCATGGGCACTGAACTCTCAGCGATTCTTAAAGAGTCTTCAGACCCGGGGAAATTGGTTTTGGATGCAATGCAGGGGTTTTATGCTGACAACAGGGAGTCAGATTTTGAATTGAGAGTTAGAAGAAGAAGTTGTTGTCTTTTGTTAGAGGAGTTGAGGAGAATCTCTCCACAAATGAATCCTCAAGTGAAAGACGAGGCAACGAAACTGGCTGCTAATTGGAAAGCCAAGATGACAGTGGCGAGTAACAGTGAGTTGGAGGTTTTGGGATTTTTGTGGCTTGTTGCTGCTTATGACTTAACTTCTATCTACGAAGCAAAGGAGCTTAAAAGGCTTCTTTCTAAAGTTTCGCGGGGTGAACAAGCAGCTCAAATAGGCCTGGCCCTTGGTATTCCGGCACCTGGAAGCCGCAACATTTGTTCCCCTGTCAAAATTGAGGAACCAGAATCTTCTACGGCCAACAATGCAGCAACTATTTCTTCTCCTAATCCTCAAACAAGTGCCACCACAGATGCGAGGGATTCGCGGGGGTGTATAAATGAGACTTTGAATTGGAATGTAGATACAATACAGAATGAAATAGTGGCTGCTGTTCAATCGGCATCAGACCCAGAAAAACTTGTGTTGAAGATGATGCAAAATTCTCTTGACAAATACTGGACAAGCGCAGAAGGTAGTCTGAAAAAGCGTGTCATGTCATGTAATATTTCTCTATTAAAGATGCTAATGAGAGTCTCACCACAAGTTGGATCTCACGTAAAAGAAGATGCCAAAAAGCTAGGACTCCAATGGAAAGCAAAAATTAGAGCTGATGCTGAACATTTGGAACATCTTTTGGAGATTGTGGGGTTTTTGCTATTTATTGTTGCATATGGATTGCTTCCTACACTAAATGGAGATGAGATTGTAAAGTTTCTTGAGAAGCTTTCTCAATATAAAGAAGCTGTAGAATCATGTCAGATGCATGGTTTTCTAGATACGATCCTTGCTGTCTTTATTCAGACACTGGTGGAAAGGAAACAACTCTTTCAGGCTCTTGGATTTGTCTTTAAGTTCAAGTTACGTGACAAGTTCACTCCAGTACGAGTCTTAAAAGACTATGTGAAGGATGCAATGAAGTGTTGGTCAGAAACTTTGAAGAGAAAGAAATCAGTTGATGAAAAGGTTGAGTTTTTAGACAGCAAAATAGCTGCTTTTGGAACTGTGCTTCGATGCATCAAAGAATACAACCTCGAGTCTGAATACCCATCCGGGGAAATTGCAGTACAAATAGGTGAGCTGGAAAAACTAAAGGAGATTTGGAGAAGTTCGGCCAAACATCTTGCCTCTGTCGCTAGACAGCAAGAGCAGAGTCAAGGGAAGAAACGTAGCAGCAGCACTTGTTCCCCTGCGGTTCAACAAGGACAACTGCAGAAAAGTAAATTCCATCGGACAGCTGAAGCACCCCCTAGTCCCTATAAATCACCAACTTTCACCACTGTGCTTCTGCAGTCAAGACCATCACCATCTTTTGCTTATGGAAATTATGGACAGCATGGGCAGGTTGGTGATATGGCTGCCAACTCTAGTGAAGTTGGTAGGTCTTCATCTTTGGCATATGGAAATTACGGACAGCTTGGGCAGTTTGGTGATATGGCTGCCAAGTCTAGTGAAGTTGATAGATCTTCATCTTTGGTGAGTGAAATTCATGGACAGCATGGGCAGTTTGGTTATATGGCTGCCAACTTAGCTGAAGTTAATCCTCGTTTTGGTACCGTAGATGAAGTTGATCCTCATTTTGGTGTACATAATCTTCCTAACCCTTATTCATCCATGGATTTCACCTTCTTCCCTGGCCGTTATGGCCCCTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

981

Amino Acids

112.08

Weight (kDa)

5.91

Isoelectric Point (pI)

53.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 347 - 493 1.2e-31 Frigida-like protein
Frigida PF07899 549 - 795 5.2e-46 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2620
Acc65I GGTACC 1 cut(s) 2840
AccB1I GGYRCC 2 cut(s) 1486, 2840
AccB7I CCANNNNNTGG 1 cut(s) 1835
AccBSI CCGCTC 1 cut(s) 292
AccI GTMKAC 1 cut(s) 146
AccII CGCG 4 cut(s) 62, 192, 1441, 1615
AccIII TCCGGA 1 cut(s) 162
AclWI GGATC 5 cut(s) 195, 987, 1846, 2065, 2852
AcoI YGGCCR 3 cut(s) 1545, 2400, 2923
AcsI RAATTY 3 cut(s) 1729, 2510, 2772
AcuI CTGAAG 6 cut(s) 122, 791, 1097, 1113, 2547, 2841
AfaI GTAC 5 cut(s) 1005, 2172, 2355, 2842, 2874
AfiI CCNNNNNNNGG 9 cut(s) 61, 175, 916, 1000, 1490, 1835, 2341, 2837, 2867
AflIII ACRYGT 1 cut(s) 874
AjnI CCWGG 3 cut(s) 1467, 1489, 2920
AjuI GAANNNNNNNTTGG 2 cut(s) 1133, 1165
AleI CACNNNNGTG 1 cut(s) 2567
Alw21I GWGCWC 1 cut(s) 162
Alw26I GTCTC 2 cut(s) 1625, 1828
AlwI GGATC 5 cut(s) 195, 987, 1846, 2065, 2852
AlwNI CAGNNNCTG 1 cut(s) 2095
Ama87I CYCGRG 3 cut(s) 1017, 1135, 2321
Aor13HI TCCGGA 1 cut(s) 162
AoxI GGCC 6 cut(s) 1465, 1470, 1545, 2400, 2923, 2932
ApoI RAATTY 3 cut(s) 1729, 2510, 2772
Asp700I GAANNNNTTC 2 cut(s) 758, 1087
Asp718I GGTACC 1 cut(s) 2840
AspA2I CCTAGG 1 cut(s) 55
AspLEI GCGC 2 cut(s) 62, 1757
AspS9I GGNCC 4 cut(s) 133, 165, 1471, 2933
AsuC2I CCSGG 7 cut(s) 151, 169, 1018, 1019, 1136, 1137, 2341
AvaI CYCGRG 3 cut(s) 1017, 1135, 2321
AvaII GGWCC 2 cut(s) 133, 165
AvrII CCTAGG 1 cut(s) 55
BaeGI GKGCMC 1 cut(s) 1100
BanI GGYRCC 2 cut(s) 1486, 2840
BarI GAAGNNNNNNTAC 4 cut(s) 855, 887, 2865, 2897
BbsI GAAGAC 2 cut(s) 1119, 2664
Bbv12I GWGCWC 1 cut(s) 162
BccI CCATC 8 cut(s) 205, 232, 634, 1034, 2344, 2523, 2596, 2602
BceAI ACGGC 3 cut(s) 27, 1560, 2910
BciT130I CCWGG 3 cut(s) 1469, 1491, 2922
BcnI CCSGG 7 cut(s) 151, 169, 1018, 1019, 1136, 1137, 2341
BcoDI GTCTC 2 cut(s) 1625, 1828
BfaI CTAG 9 cut(s) 56, 468, 965, 1868, 2063, 2424, 2538, 2655, 2736
BfmI CTRYAG 3 cut(s) 2034, 2498, 2576
BfuAI ACCTGC 1 cut(s) 2620
BglI GCCNNNNNGGC 1 cut(s) 2931
BglII AGATCT 1 cut(s) 2750
BlnI CCTAGG 1 cut(s) 55
Bme18I GGWCC 2 cut(s) 133, 165
BmeT110I CYCGRG 3 cut(s) 1017, 1135, 2321
BmgT120I GGNCC 4 cut(s) 133, 165, 1471, 2933
BmiI GGNNCC 6 cut(s) 53, 167, 1488, 1530, 2842, 2935
BpiI GAAGAC 2 cut(s) 1119, 2664
BplI GAGNNNNNCTC 2 cut(s) 1240, 1272
BpmI CTGGAG 3 cut(s) 149, 977, 2151
Bpu10I CCTNAGC 1 cut(s) 371
BpuEI CTTGAG 2 cut(s) 1257, 2027
BpuMI CCSGG 7 cut(s) 151, 169, 1018, 1019, 1136, 1137, 2341
BsaAI YACGTR 2 cut(s) 1846, 2153
BsaBI GATNNNNATC 1 cut(s) 2755
BsaWI WCCGGW 1 cut(s) 162
Bsc4I CCNNNNNNNGG 9 cut(s) 61, 175, 916, 1000, 1490, 1835, 2341, 2837, 2867
Bse1I ACTGG 4 cut(s) 1302, 1751, 2100, 2168
Bse3DI GCAATG 2 cut(s) 1164, 2208
Bse8I GATNNNNATC 1 cut(s) 2755
BseAI TCCGGA 1 cut(s) 162
BseBI CCWGG 3 cut(s) 1469, 1491, 2922
BseGI GGATG 5 cut(s) 1045, 1159, 2203, 2336, 2897
BseJI GATNNNNATC 1 cut(s) 2755
BseLI CCNNNNNNNGG 9 cut(s) 61, 175, 916, 1000, 1490, 1835, 2341, 2837, 2867
BseMI GCAATG 2 cut(s) 1164, 2208
BseMII CTCAG 2 cut(s) 689, 1122
BseNI ACTGG 4 cut(s) 1302, 1751, 2100, 2168
BseSI GKGCMC 1 cut(s) 1100
Bsh1236I CGCG 4 cut(s) 62, 192, 1441, 1615
BshFI GGCC 6 cut(s) 1467, 1472, 1547, 2402, 2925, 2934
BshNI GGYRCC 2 cut(s) 1486, 2840
BsiHKAI GWGCWC 1 cut(s) 162
BsiHKCI CYCGRG 3 cut(s) 1017, 1135, 2321
BsiSI CCGG 7 cut(s) 151, 163, 169, 1018, 1136, 1484, 2340
BslFI GGGAC 1 cut(s) 2526
BslI CCNNNNNNNGG 9 cut(s) 61, 175, 916, 1000, 1490, 1835, 2341, 2837, 2867
BsmAI GTCTC 2 cut(s) 1625, 1828
BsmFI GGGAC 1 cut(s) 2526
BsmI GAATGC 1 cut(s) 985
BsnI GGCC 6 cut(s) 1467, 1472, 1547, 2402, 2925, 2934
BsoBI CYCGRG 3 cut(s) 1017, 1135, 2321
Bsp1286I GDGCHC 2 cut(s) 162, 1100
Bsp13I TCCGGA 1 cut(s) 162
Bsp1407I TGTACA 1 cut(s) 2872
Bsp143I GATC 8 cut(s) 187, 273, 979, 1029, 1838, 2070, 2750, 2857
Bsp19I CCATGG 2 cut(s) 1092, 2901
BspANI GGCC 6 cut(s) 1467, 1472, 1547, 2402, 2925, 2934
BspCNI CTCAG 2 cut(s) 690, 1121
BspEI TCCGGA 1 cut(s) 162
BspFNI CGCG 4 cut(s) 62, 192, 1441, 1615
BspLI GGNNCC 6 cut(s) 53, 167, 1488, 1530, 2842, 2935
BspMAI CTGCAG 2 cut(s) 2502, 2580
BspMI ACCTGC 1 cut(s) 2620
BspPI GGATC 5 cut(s) 195, 987, 1846, 2065, 2852
BspT107I GGYRCC 2 cut(s) 1486, 2840
BsrBI CCGCTC 1 cut(s) 292
BsrDI GCAATG 2 cut(s) 1164, 2208
BsrGI TGTACA 1 cut(s) 2872
BsrI ACTGG 4 cut(s) 1302, 1751, 2100, 2168
BssMI GATC 8 cut(s) 187, 273, 979, 1029, 1838, 2070, 2750, 2857
BssT1I CCWWGG 4 cut(s) 55, 1092, 1474, 2901
Bst2UI CCWGG 3 cut(s) 1469, 1491, 2922
Bst4CI ACNGT 6 cut(s) 112, 1327, 1340, 2293, 2569, 2845
Bst6I CTCTTC 5 cut(s) 485, 596, 1039, 1073, 2222
BstAUI TGTACA 1 cut(s) 2872
BstBAI YACGTR 2 cut(s) 1846, 2153
BstC8I GCNNGC 1 cut(s) 87
BstDEI CTNAG 4 cut(s) 371, 698, 1108, 2815
BstDSI CCRYGG 2 cut(s) 1092, 2901
BstENI CCTNNNNNAGG 1 cut(s) 914
BstF5I GGATG 5 cut(s) 1045, 1159, 2203, 2336, 2897
BstFNI CGCG 4 cut(s) 62, 192, 1441, 1615
BstHHI GCGC 2 cut(s) 62, 1757
BstKTI GATC 8 cut(s) 190, 276, 982, 1032, 1841, 2073, 2753, 2860
BstMAI GTCTC 2 cut(s) 1625, 1828
BstMBI GATC 8 cut(s) 187, 273, 979, 1029, 1838, 2070, 2750, 2857
BstMWI GCNNNNNNNGC 5 cut(s) 1420, 1553, 2420, 2816, 2931
BstNI CCWGG 3 cut(s) 1469, 1491, 2922
BstNSI RCATGY 2 cut(s) 455, 834
BstSFI CTRYAG 3 cut(s) 2034, 2498, 2576
BstSLI GKGCMC 1 cut(s) 1100
BstUI CGCG 4 cut(s) 62, 192, 1441, 1615
BstV2I GAAGAC 2 cut(s) 1119, 2664
BstX2I RGATCY 3 cut(s) 979, 1838, 2750
BstYI RGATCY 3 cut(s) 979, 1838, 2750
BsuRI GGCC 6 cut(s) 1467, 1472, 1547, 2402, 2925, 2934
BtgI CCRYGG 2 cut(s) 1092, 2901
BtsCI GGATG 5 cut(s) 1045, 1159, 2203, 2336, 2897
BtsIMutI CAGTG 5 cut(s) 1098, 1332, 1345, 2093, 2565
BveI ACCTGC 1 cut(s) 2620
Cac8I GCNNGC 1 cut(s) 87
CaiI CAGNNNCTG 1 cut(s) 2095
CfoI GCGC 2 cut(s) 62, 1757
Cfr13I GGNCC 4 cut(s) 133, 165, 1471, 2933
Cfr9I CCCGGG 2 cut(s) 1017, 1135
Csp6I GTAC 5 cut(s) 1004, 2171, 2354, 2841, 2873
CviQI GTAC 5 cut(s) 1004, 2171, 2354, 2841, 2873
DdeI CTNAG 4 cut(s) 371, 698, 1108, 2815
DpnI GATC 8 cut(s) 189, 275, 981, 1031, 1840, 2072, 2752, 2859
DpnII GATC 8 cut(s) 187, 273, 979, 1029, 1838, 2070, 2750, 2857
EaeI YGGCCR 3 cut(s) 1545, 2400, 2923
Eam1104I CTCTTC 5 cut(s) 485, 596, 1039, 1073, 2222
EarI CTCTTC 5 cut(s) 485, 596, 1039, 1073, 2222
EciI GGCGGA 1 cut(s) 221
Eco130I CCWWGG 4 cut(s) 55, 1092, 1474, 2901
Eco147I AGGCCT 1 cut(s) 1467
Eco47I GGWCC 2 cut(s) 133, 165
Eco57I CTGAAG 6 cut(s) 122, 791, 1097, 1113, 2547, 2841
Eco88I CYCGRG 3 cut(s) 1017, 1135, 2321
EcoNI CCTNNNNNAGG 1 cut(s) 914
EcoRII CCWGG 3 cut(s) 1467, 1489, 2920
EcoT14I CCWWGG 4 cut(s) 55, 1092, 1474, 2901
EcoT22I ATGCAT 2 cut(s) 2055, 2306
ErhI CCWWGG 4 cut(s) 55, 1092, 1474, 2901
FaqI GGGAC 1 cut(s) 2526
FauI CCCGC 3 cut(s) 10, 1434, 1608
FauNDI CATATG 2 cut(s) 1960, 2686
FblI GTMKAC 1 cut(s) 146
FokI GGATG 5 cut(s) 1052, 1166, 2210, 2323, 2884
FspBI CTAG 9 cut(s) 56, 468, 965, 1868, 2063, 2424, 2538, 2655, 2736
GlaI GCGC 2 cut(s) 61, 1756
GsuI CTGGAG 3 cut(s) 149, 977, 2151
HaeIII GGCC 6 cut(s) 1467, 1472, 1547, 2402, 2925, 2934
HapII CCGG 7 cut(s) 151, 163, 169, 1018, 1136, 1484, 2340
HhaI GCGC 2 cut(s) 62, 1757
Hin6I GCGC 2 cut(s) 60, 1755
HinP1I GCGC 2 cut(s) 60, 1755
HincII GTYRAC 1 cut(s) 147
HindII GTYRAC 1 cut(s) 147
HindIII AAGCTT 2 cut(s) 87, 2012
HpaII CCGG 7 cut(s) 151, 163, 169, 1018, 1136, 1484, 2340
Hpy166II GTNNAC 5 cut(s) 108, 147, 1448, 2163, 2873
Hpy188III TCNNGA 6 cut(s) 163, 994, 1736, 2006, 2063, 2583
Hpy8I GTNNAC 5 cut(s) 108, 147, 1448, 2163, 2873
Hpy99I CGWCG 1 cut(s) 97
HpyCH4III ACNGT 6 cut(s) 112, 1327, 1340, 2293, 2569, 2845
HpyCH4IV ACGT 4 cut(s) 876, 1845, 2152, 2455
HpyF10VI GCNNNNNNNGC 5 cut(s) 1420, 1553, 2420, 2816, 2931
HpyF3I CTNAG 4 cut(s) 371, 698, 1108, 2815
HpySE526I ACGT 4 cut(s) 876, 1845, 2152, 2455
HspAI GCGC 2 cut(s) 60, 1755
Kpn2I TCCGGA 1 cut(s) 162
KpnI GGTACC 1 cut(s) 2844
Kzo9I GATC 8 cut(s) 187, 273, 979, 1029, 1838, 2070, 2750, 2857
LmnI GCTCC 9 cut(s) 51, 124, 165, 289, 367, 820, 883, 912, 1411
MaeI CTAG 9 cut(s) 56, 468, 965, 1868, 2063, 2424, 2538, 2655, 2736
MaeII ACGT 4 cut(s) 876, 1845, 2152, 2455
MaeIII GTNAC 4 cut(s) 960, 1334, 2148, 2153
MalI GATC 8 cut(s) 189, 275, 981, 1031, 1840, 2072, 2752, 2859
MbiI CCGCTC 1 cut(s) 292
MboI GATC 8 cut(s) 187, 273, 979, 1029, 1838, 2070, 2750, 2857
MflI RGATCY 3 cut(s) 979, 1838, 2750
MhlI GDGCHC 2 cut(s) 162, 1100
MmeI TCCRAC 3 cut(s) 825, 1326, 1816
Mph1103I ATGCAT 2 cut(s) 2055, 2306
MroI TCCGGA 1 cut(s) 162
MroXI GAANNNNTTC 2 cut(s) 758, 1087
MseI TTAA 9 cut(s) 888, 1119, 1388, 1416, 1805, 2139, 2180, 2826, 2941
MslI CAYNNNNRTG 2 cut(s) 2567, 2868
MspA1I CMGCKG 1 cut(s) 2525
MspI CCGG 7 cut(s) 151, 163, 169, 1018, 1136, 1484, 2340
Mva1269I GAATGC 1 cut(s) 985
MvaI CCWGG 3 cut(s) 1469, 1491, 2922
MvnI CGCG 4 cut(s) 62, 192, 1441, 1615
MwoI GCNNNNNNNGC 5 cut(s) 1420, 1553, 2420, 2816, 2931
NciI CCSGG 7 cut(s) 151, 169, 1018, 1019, 1136, 1137, 2341
NcoI CCATGG 2 cut(s) 1092, 2901
NdeI CATATG 2 cut(s) 1960, 2686
NdeII GATC 8 cut(s) 187, 273, 979, 1029, 1838, 2070, 2750, 2857
NlaIV GGNNCC 6 cut(s) 53, 167, 1488, 1530, 2842, 2935
NmuCI GTSAC 1 cut(s) 2153
NsiI ATGCAT 2 cut(s) 2055, 2306
NspI RCATGY 2 cut(s) 455, 834
OliI CACNNNNGTG 1 cut(s) 2567
PaeR7I CTCGAG 1 cut(s) 2321
PceI AGGCCT 1 cut(s) 1467
PcsI WCGNNNNNNNCGW 1 cut(s) 89
PctI GAATGC 1 cut(s) 985
PdmI GAANNNNTTC 2 cut(s) 758, 1087
PflMI CCANNNNNTGG 1 cut(s) 1835
Ppu21I YACGTR 2 cut(s) 1846, 2153
Psp6I CCWGG 3 cut(s) 1467, 1489, 2920
PspGI CCWGG 3 cut(s) 1467, 1489, 2920
PspN4I GGNNCC 6 cut(s) 53, 167, 1488, 1530, 2842, 2935
PspPI GGNCC 4 cut(s) 133, 165, 1471, 2933
PspXI VCTCGAGB 1 cut(s) 2321
PstI CTGCAG 2 cut(s) 2502, 2580
PstNI CAGNNNCTG 1 cut(s) 2095
PsuI RGATCY 3 cut(s) 979, 1838, 2750
PvuII CAGCTG 1 cut(s) 2525
RsaI GTAC 5 cut(s) 1005, 2172, 2355, 2842, 2874
RsaNI GTAC 5 cut(s) 1004, 2171, 2354, 2841, 2873
RseI CAYNNNNRTG 2 cut(s) 2567, 2868
SalI GTCGAC 1 cut(s) 145
SaqAI TTAA 9 cut(s) 888, 1119, 1388, 1416, 1805, 2139, 2180, 2826, 2941
Sau3AI GATC 8 cut(s) 187, 273, 979, 1029, 1838, 2070, 2750, 2857
Sau96I GGNCC 4 cut(s) 133, 165, 1471, 2933
SduI GDGCHC 2 cut(s) 162, 1100
SfcI CTRYAG 3 cut(s) 2034, 2498, 2576
SfiI GGCCNNNNNGGCC 1 cut(s) 2931
Sfr274I CTCGAG 1 cut(s) 2321
SinI GGWCC 2 cut(s) 133, 165
SlaI CTCGAG 1 cut(s) 2321
SmaI CCCGGG 2 cut(s) 1019, 1137
SmiMI CAYNNNNRTG 2 cut(s) 2567, 2868
SmlI CTYRAG 3 cut(s) 1272, 2006, 2321
SmoI CTYRAG 3 cut(s) 1272, 2006, 2321
SseBI AGGCCT 1 cut(s) 1467
SspI AATATT 1 cut(s) 1795
SspMI CTAG 9 cut(s) 56, 468, 965, 1868, 2063, 2424, 2538, 2655, 2736
StuI AGGCCT 1 cut(s) 1467
StyI CCWWGG 4 cut(s) 55, 1092, 1474, 2901
TaaI ACNGT 6 cut(s) 112, 1327, 1340, 2293, 2569, 2845
TaiI ACGT 4 cut(s) 879, 1848, 2155, 2458
TaqI TCGA 9 cut(s) 95, 141, 146, 174, 276, 716, 851, 2299, 2322
TatI WGTACW 2 cut(s) 2353, 2872
TauI GCSGC 3 cut(s) 17, 65, 1500
Tru1I TTAA 9 cut(s) 888, 1119, 1388, 1416, 1805, 2139, 2180, 2826, 2941
Tru9I TTAA 9 cut(s) 888, 1119, 1388, 1416, 1805, 2139, 2180, 2826, 2941
TscAI CASTG 5 cut(s) 1105, 1332, 1345, 2100, 2572
TseFI GTSAC 1 cut(s) 2153
Tsp45I GTSAC 1 cut(s) 2153
TspGWI ACGGA 1 cut(s) 2712
TspMI CCCGGG 2 cut(s) 1017, 1135
TspRI CASTG 5 cut(s) 1105, 1332, 1345, 2100, 2572
Van91I CCANNNNNTGG 1 cut(s) 1835
VpaK11BI GGWCC 2 cut(s) 133, 165
XagI CCTNNNNNAGG 1 cut(s) 914
XapI RAATTY 3 cut(s) 1729, 2510, 2772
XbaI TCTAGA 1 cut(s) 2062
XceI RCATGY 2 cut(s) 455, 834
XcmI CCANNNNNNNNNTGG 1 cut(s) 1324
XhoI CTCGAG 1 cut(s) 2321
XmaI CCCGGG 2 cut(s) 1017, 1135
XmaJI CCTAGG 1 cut(s) 55
XmiI GTMKAC 1 cut(s) 146
XmnI GAANNNNTTC 2 cut(s) 758, 1087
XspI CTAG 9 cut(s) 56, 468, 965, 1868, 2063, 2424, 2538, 2655, 2736
Zsp2I ATGCAT 2 cut(s) 2055, 2306
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.