Rorug02G0644500

FRIGIDA-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000126
Physical Location & Seq
Forward (+)
75519634 .. 75521671
2038 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0644500.1

Sequence Viewer

Length: 1455 bp
ATGTCGTCCCAAAATCCCAGCAATGAAACTCTTTTCATTTCTGTTTTGATCCTATTTATCCTTGTTATCTTTTGGAAGATGATATCCAAAATCGTAGTCAAGTCTCCCCCAGGGCCGTGGAAGCTGCCTATGATAGGAAACTTGCATCAGTTGGTGAGTACACTCCCACATCGTACGCTGCGAGACTTGGCCAAGCAACACGGACCCATCATGCACCTGAAAATGGGTCAGTTGGAGACCATAATTATTTCATCAGCCAAAGGAGCTCAAGAGGTGTTGAAGACTCATGAGCTCAGTTTGAGTCAGAGGCCTCAGGTTTTGGCTGTAGAAGTCATGTCCTATGGTCAATCCAGTGTCGTTTTCGCTCCTTATGGAGATTTCTGGAGAGAGCTTCGCAAGATTTCCGTGTGTGAACTCTTGAGTGCCAAACGTGTGCAGTCGTTCAGGTCTATAAGGGAAGAAGAGGTGTGGAGTCTCCTCGAATCTGTTTCGAATATGAGCCCCTCATCATCGTTCAATTTCAGCGAGAAGATCTTCGCCTTGACGTATGGGATAGTGTCGAGGGCAGCGTTTGGGAAGAGGTGCTCCGATCAAGTTCAGAAAGAGTTCACGTCTTTGGTTGAGGAAGCAATAAAACTCGCTGCAGGTTTTGACGTGCCGGATTTGTTTCCTTCACTCAAGTTTCTTGGTTACCTTACCGGAAGCATACCGGCCATGAGGAACATGCGAGACAAGCTCGGAATCATTCTCGACGGTATCATCAACGATCATGTAGTTCTTGATGGTCATGATAATGATAATGAAGATTTTGTTGACGACTTCTTTTCTGCGGGGAGTGAGACTTCAGCTACTACCACAGAATGGGCAATGTCGGAGTTGATGAGAAACCCTGAAGTGATGAAGAAGGCCCAAGCAGAGGTGCGCCAATTTTTAGTGAACCGCCTTGAAGGAAAGAAAAGAATTGAAGAAGCAGATGTTCAAACACTGGACTACTTGAAAGCAGTGGTAAAAGAAACTCTGCGACTTCACCCTACCATTCCTTTAATCCCAAGAGAAGCAAGGGAGAGATGCGAGATCAGTGGTTACCAAGTAGCAGTTAAGACAAAAGTGATTGTGAACGAGTGGGCAATGGGAAGAGATGCAGAGAATTGGGTTGATCCCGAGTCGTTTAAGCCAGAGAGGTTCCTCCATATCCATGGTGATAAAGTTAGTTCCAATAATATCGACTTCAAAGGGAGCAACTTTGAGTTCATTCCATTTGGGGCAGGTAGGAGAATATGTCCGGGCATATCATTTGCCACTGCAATGATTGAGCTTGCTCTTTCTCAGTTGCTCTATCATTTTGATTGGAAACTCCCCAGTGGAATCAAACCGGATGAGCTTGACATGTCGGAGACTTTCGGAGTAACCTGTAGGAGAAAAAATGATCTGTACTTGATTGCCACCCCTCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Frigida

Protein Analysis

484

Amino Acids

54.7

Weight (kDa)

6.34

Isoelectric Point (pI)

38.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 36 - 231 1e-24 Cytochrome P450
p450 PF00067 266 - 474 1.3e-60 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 635, 1256
AccB7I CCANNNNNTGG 1 cut(s) 861
AciI CCGC 2 cut(s) 830, 940
AclWI GGATC 2 cut(s) 43, 1151
AcoI YGGCCR 2 cut(s) 189, 711
AcuI CTGAAG 2 cut(s) 828, 912
AfaI GTAC 3 cut(s) 160, 175, 1433
AfiI CCNNNNNNNGG 4 cut(s) 134, 223, 861, 916
AflIII ACRYGT 2 cut(s) 430, 1386
AgsI TTSAA 7 cut(s) 280, 517, 947, 965, 980, 997, 1231
AjiI CACGTC 2 cut(s) 612, 655
AjnI CCWGG 1 cut(s) 109
AluBI AGCT 8 cut(s) 124, 266, 292, 391, 736, 848, 1315, 1381
AluI AGCT 8 cut(s) 124, 266, 292, 391, 736, 848, 1315, 1381
Alw21I GWGCWC 3 cut(s) 268, 294, 587
Alw26I GTCTC 7 cut(s) 108, 177, 230, 479, 723, 833, 1388
AlwI GGATC 2 cut(s) 43, 1151
Ama87I CYCGRG 1 cut(s) 1160
AoxI GGCC 5 cut(s) 113, 189, 308, 711, 906
ApeKI GCWGC 4 cut(s) 124, 178, 566, 641
ArsI GACNNNNNNTTYG 2 cut(s) 81, 113
Asp700I GAANNNNTTC 2 cut(s) 533, 605
AspLEI GCGC 1 cut(s) 924
AspS9I GGNCC 3 cut(s) 113, 203, 907
AsuC2I CCSGG 1 cut(s) 1284
AsuHPI GGTGA 3 cut(s) 166, 1019, 1211
AsuII TTCGAA 1 cut(s) 491
AvaI CYCGRG 1 cut(s) 1160
AvaII GGWCC 1 cut(s) 203
AxyI CCTNAGG 1 cut(s) 312
BalI TGGCCA 1 cut(s) 191
BanII GRGCYC 3 cut(s) 268, 294, 503
BbsI GAAGAC 1 cut(s) 287
Bbv12I GWGCWC 3 cut(s) 268, 294, 587
BbvI GCAGC 4 cut(s) 111, 165, 578, 628
BccI CCATC 2 cut(s) 215, 776
BceAI ACGGC 1 cut(s) 100
BciT130I CCWGG 1 cut(s) 111
BcnI CCSGG 1 cut(s) 1284
BcoDI GTCTC 7 cut(s) 108, 177, 230, 479, 723, 833, 1388
BfmI CTRYAG 3 cut(s) 324, 642, 1411
BfuAI ACCTGC 2 cut(s) 635, 1256
BglII AGATCT 1 cut(s) 531
BisI GCNGC 4 cut(s) 125, 179, 567, 642
BlsI GCNGC 4 cut(s) 126, 180, 568, 643
Bme1390I CCNGG 2 cut(s) 111, 1284
Bme18I GGWCC 1 cut(s) 203
BmeT110I CYCGRG 1 cut(s) 1160
BmgBI CACGTC 2 cut(s) 612, 655
BmgT120I GGNCC 3 cut(s) 113, 203, 907
BmiI GGNNCC 2 cut(s) 205, 1184
BmrFI CCNGG 2 cut(s) 111, 1284
BmrI ACTGGG 1 cut(s) 1353
BmsI GCATC 3 cut(s) 154, 1058, 1129
BmuI ACTGGG 1 cut(s) 1353
BpiI GAAGAC 1 cut(s) 287
BplI GAGNNNNNCTC 2 cut(s) 720, 752
BpmI CTGGAG 1 cut(s) 403
Bpu14I TTCGAA 1 cut(s) 491
BpuEI CTTGAG 3 cut(s) 252, 439, 662
BpuMI CCSGG 1 cut(s) 1284
BsaI GGTCTC 1 cut(s) 230
BsaJI CCNNGG 4 cut(s) 109, 110, 116, 1195
BsaWI WCCGGW 2 cut(s) 698, 1372
BsaXI ACNNNNNCTCC 2 cut(s) 1264, 1294
Bsc4I CCNNNNNNNGG 4 cut(s) 134, 223, 861, 916
Bse118I RCCGGY 1 cut(s) 709
Bse1I ACTGG 3 cut(s) 351, 990, 1359
Bse21I CCTNAGG 1 cut(s) 312
Bse3DI GCAATG 4 cut(s) 28, 873, 1134, 1311
BseBI CCWGG 1 cut(s) 111
BseDI CCNNGG 4 cut(s) 109, 110, 116, 1195
BseGI GGATG 1 cut(s) 1381
BseLI CCNNNNNNNGG 4 cut(s) 134, 223, 861, 916
BseMI GCAATG 4 cut(s) 28, 873, 1134, 1311
BseMII CTCAG 3 cut(s) 307, 326, 1340
BseNI ACTGG 3 cut(s) 351, 990, 1359
BseRI GAGGAG 1 cut(s) 467
BseXI GCAGC 4 cut(s) 111, 165, 578, 628
BseYI CCCAGC 1 cut(s) 17
BsgI GTGCAG 1 cut(s) 455
BshFI GGCC 5 cut(s) 115, 191, 310, 713, 908
BsiHKAI GWGCWC 3 cut(s) 268, 294, 587
BsiHKCI CYCGRG 1 cut(s) 1160
BsiSI CCGG 5 cut(s) 659, 699, 710, 1283, 1373
BsiWI CGTACG 1 cut(s) 173
BslI CCNNNNNNNGG 4 cut(s) 134, 223, 861, 916
BsmAI GTCTC 7 cut(s) 108, 177, 230, 479, 723, 833, 1388
BsnI GGCC 5 cut(s) 115, 191, 310, 713, 908
Bso31I GGTCTC 1 cut(s) 230
BsoBI CYCGRG 1 cut(s) 1160
Bsp119I TTCGAA 1 cut(s) 491
Bsp1286I GDGCHC 4 cut(s) 268, 294, 503, 587
Bsp143I GATC 7 cut(s) 48, 531, 589, 766, 1074, 1156, 1426
Bsp19I CCATGG 1 cut(s) 1195
BspACI CCGC 2 cut(s) 830, 940
BspANI GGCC 5 cut(s) 115, 191, 310, 713, 908
BspCNI CTCAG 3 cut(s) 306, 325, 1339
BspHI TCATGA 2 cut(s) 286, 787
BspLI GGNNCC 2 cut(s) 205, 1184
BspMAI CTGCAG 1 cut(s) 646
BspMI ACCTGC 2 cut(s) 635, 1256
BspPI GGATC 2 cut(s) 43, 1151
BspT104I TTCGAA 1 cut(s) 491
BspTNI GGTCTC 1 cut(s) 230
BsrDI GCAATG 4 cut(s) 28, 873, 1134, 1311
BsrFI RCCGGY 1 cut(s) 709
BsrI ACTGG 3 cut(s) 351, 990, 1359
BssAI RCCGGY 1 cut(s) 709
BssECI CCNNGG 4 cut(s) 109, 110, 116, 1195
BssMI GATC 7 cut(s) 48, 531, 589, 766, 1074, 1156, 1426
BssT1I CCWWGG 1 cut(s) 1195
Bst2UI CCWGG 1 cut(s) 111
Bst4CI ACNGT 1 cut(s) 755
Bst6I CTCTTC 3 cut(s) 456, 572, 1129
BstBI TTCGAA 1 cut(s) 491
BstC8I GCNNGC 1 cut(s) 1317
BstDEI CTNAG 3 cut(s) 293, 312, 1326
BstDSI CCRYGG 2 cut(s) 116, 1195
BstEII GGTNACC 2 cut(s) 689, 1082
BstENI CCTNNNNNAGG 1 cut(s) 132
BstF5I GGATG 1 cut(s) 1381
BstHHI GCGC 1 cut(s) 924
BstKTI GATC 7 cut(s) 51, 534, 592, 769, 1077, 1159, 1429
BstMAI GTCTC 7 cut(s) 108, 177, 230, 479, 723, 833, 1388
BstMBI GATC 7 cut(s) 48, 531, 589, 766, 1074, 1156, 1426
BstMWI GCNNNNNNNGC 3 cut(s) 121, 263, 733
BstNI CCWGG 1 cut(s) 111
BstNSI RCATGY 2 cut(s) 727, 1390
BstPI GGTNACC 2 cut(s) 689, 1082
BstSCI CCNGG 2 cut(s) 109, 1282
BstSFI CTRYAG 3 cut(s) 324, 642, 1411
BstV1I GCAGC 4 cut(s) 111, 165, 578, 628
BstV2I GAAGAC 1 cut(s) 287
BstX2I RGATCY 1 cut(s) 531
BstXI CCANNNNNNTGG 2 cut(s) 117, 1196
BstYI RGATCY 1 cut(s) 531
Bsu36I CCTNAGG 1 cut(s) 312
BsuRI GGCC 5 cut(s) 115, 191, 310, 713, 908
BtgI CCRYGG 2 cut(s) 116, 1195
BtrI CACGTC 2 cut(s) 612, 655
BtsCI GGATG 1 cut(s) 1381
BtsI GCAGTG 2 cut(s) 1008, 1299
BtsIMutI CAGTG 6 cut(s) 358, 983, 1008, 1084, 1299, 1366
BveI ACCTGC 2 cut(s) 635, 1256
Cac8I GCNNGC 1 cut(s) 1317
CciI TCATGA 2 cut(s) 286, 787
CfoI GCGC 1 cut(s) 924
Cfr10I RCCGGY 1 cut(s) 709
Cfr13I GGNCC 3 cut(s) 113, 203, 907
Csp6I GTAC 3 cut(s) 159, 174, 1432
CviAII CATG 9 cut(s) 211, 287, 334, 715, 724, 770, 788, 1196, 1387
CviQI GTAC 3 cut(s) 159, 174, 1432
DdeI CTNAG 3 cut(s) 293, 312, 1326
DpnI GATC 7 cut(s) 50, 533, 591, 768, 1076, 1158, 1428
DpnII GATC 7 cut(s) 48, 531, 589, 766, 1074, 1156, 1426
EaeI YGGCCR 2 cut(s) 189, 711
Eam1104I CTCTTC 3 cut(s) 456, 572, 1129
EarI CTCTTC 3 cut(s) 456, 572, 1129
Ecl136II GAGCTC 2 cut(s) 266, 292
Eco130I CCWWGG 1 cut(s) 1195
Eco147I AGGCCT 1 cut(s) 310
Eco24I GRGCYC 3 cut(s) 268, 294, 503
Eco31I GGTCTC 1 cut(s) 230
Eco32I GATATC 1 cut(s) 84
Eco47I GGWCC 1 cut(s) 203
Eco53kI GAGCTC 2 cut(s) 266, 292
Eco57I CTGAAG 2 cut(s) 828, 912
Eco81I CCTNAGG 1 cut(s) 312
Eco88I CYCGRG 1 cut(s) 1160
Eco91I GGTNACC 2 cut(s) 689, 1082
EcoICRI GAGCTC 2 cut(s) 266, 292
EcoNI CCTNNNNNAGG 1 cut(s) 132
EcoO65I GGTNACC 2 cut(s) 689, 1082
EcoRII CCWGG 1 cut(s) 109
EcoRV GATATC 1 cut(s) 84
EcoT14I CCWWGG 1 cut(s) 1195
EcoT38I GRGCYC 3 cut(s) 268, 294, 503
ErhI CCWWGG 1 cut(s) 1195
FaeI CATG 9 cut(s) 214, 290, 337, 718, 727, 773, 791, 1199, 1390
FatI CATG 9 cut(s) 210, 286, 333, 714, 723, 769, 787, 1195, 1386
FauI CCCGC 1 cut(s) 823
Fnu4HI GCNGC 4 cut(s) 125, 179, 567, 642
FokI GGATG 1 cut(s) 1388
FriOI GRGCYC 3 cut(s) 268, 294, 503
Fsp4HI GCNGC 4 cut(s) 125, 179, 567, 642
GlaI GCGC 1 cut(s) 923
GluI GCNGC 4 cut(s) 125, 179, 567, 642
GsaI CCCAGC 1 cut(s) 21
GsuI CTGGAG 1 cut(s) 403
HaeIII GGCC 5 cut(s) 115, 191, 310, 713, 908
HapII CCGG 5 cut(s) 659, 699, 710, 1283, 1373
HhaI GCGC 1 cut(s) 924
Hin1II CATG 9 cut(s) 214, 290, 337, 718, 727, 773, 791, 1199, 1390
Hin6I GCGC 1 cut(s) 922
HinP1I GCGC 1 cut(s) 922
HincII GTYRAC 1 cut(s) 814
HindII GTYRAC 1 cut(s) 814
HinfI GANTC 7 cut(s) 283, 301, 472, 482, 741, 1163, 1365
HpaII CCGG 5 cut(s) 659, 699, 710, 1283, 1373
HphI GGTGA 3 cut(s) 166, 1019, 1211
Hpy166II GTNNAC 6 cut(s) 161, 413, 609, 814, 937, 1117
Hpy188I TCNGA 7 cut(s) 306, 589, 600, 740, 874, 1393, 1403
Hpy188III TCNNGA 8 cut(s) 269, 287, 382, 418, 749, 779, 788, 1160
Hpy8I GTNNAC 6 cut(s) 161, 413, 609, 814, 937, 1117
Hpy99I CGWCG 1 cut(s) 755
HpyAV CCTTC 3 cut(s) 681, 898, 941
HpyCH4III ACNGT 1 cut(s) 755
HpyCH4IV ACGT 4 cut(s) 430, 545, 611, 654
HpyCH4V TGCA 6 cut(s) 145, 214, 436, 644, 1142, 1304
HpyF10VI GCNNNNNNNGC 3 cut(s) 121, 263, 733
HpyF3I CTNAG 3 cut(s) 293, 312, 1326
HpySE526I ACGT 4 cut(s) 430, 545, 611, 654
Hsp92II CATG 9 cut(s) 214, 290, 337, 718, 727, 773, 791, 1199, 1390
HspAI GCGC 1 cut(s) 922
Kzo9I GATC 7 cut(s) 48, 531, 589, 766, 1074, 1156, 1426
LmnI GCTCC 4 cut(s) 263, 370, 590, 1236
Lsp1109I GCAGC 4 cut(s) 111, 165, 578, 628
LweI GCATC 3 cut(s) 154, 1058, 1129
MaeII ACGT 4 cut(s) 430, 545, 611, 654
MaeIII GTNAC 3 cut(s) 689, 1082, 1405
MalI GATC 7 cut(s) 50, 533, 591, 768, 1076, 1158, 1428
MboI GATC 7 cut(s) 48, 531, 589, 766, 1074, 1156, 1426
MflI RGATCY 1 cut(s) 531
MhlI GDGCHC 4 cut(s) 268, 294, 503, 587
MlsI TGGCCA 1 cut(s) 191
MluCI AATT 5 cut(s) 243, 517, 926, 960, 1147
MluNI TGGCCA 1 cut(s) 191
MlyI GAGTC 4 cut(s) 277, 310, 481, 1172
MmeI TCCRAC 3 cut(s) 213, 852, 1371
Mox20I TGGCCA 1 cut(s) 191
MroXI GAANNNNTTC 2 cut(s) 533, 605
MscI TGGCCA 1 cut(s) 191
MseI TTAA 3 cut(s) 1043, 1098, 1170
MslI CAYNNNNRTG 3 cut(s) 792, 1194, 1304
Msp20I TGGCCA 1 cut(s) 191
MspI CCGG 5 cut(s) 659, 699, 710, 1283, 1373
MspR9I CCNGG 2 cut(s) 111, 1284
MvaI CCWGG 1 cut(s) 111
MwoI GCNNNNNNNGC 3 cut(s) 121, 263, 733
NciI CCSGG 1 cut(s) 1284
NcoI CCATGG 1 cut(s) 1195
NdeII GATC 7 cut(s) 48, 531, 589, 766, 1074, 1156, 1426
NlaIII CATG 9 cut(s) 214, 290, 337, 718, 727, 773, 791, 1199, 1390
NlaIV GGNNCC 2 cut(s) 205, 1184
NspI RCATGY 2 cut(s) 727, 1390
NspV TTCGAA 1 cut(s) 491
PagI TCATGA 2 cut(s) 286, 787
PasI CCCWGGG 1 cut(s) 110
PceI AGGCCT 1 cut(s) 310
PciI ACATGT 1 cut(s) 1386
PcsI WCGNNNNNNNCGW 2 cut(s) 178, 566
PdmI GAANNNNTTC 2 cut(s) 533, 605
PfeI GAWTC 3 cut(s) 482, 741, 1365
Pfl23II CGTACG 1 cut(s) 173
PflMI CCANNNNNTGG 1 cut(s) 861
PkrI GCNGC 4 cut(s) 126, 180, 568, 643
PleI GAGTC 4 cut(s) 277, 309, 480, 1171
PpsI GAGTC 4 cut(s) 277, 309, 480, 1171
PscI ACATGT 1 cut(s) 1386
Psp124BI GAGCTC 2 cut(s) 268, 294
Psp6I CCWGG 1 cut(s) 109
PspEI GGTNACC 2 cut(s) 689, 1082
PspFI CCCAGC 1 cut(s) 17
PspGI CCWGG 1 cut(s) 109
PspLI CGTACG 1 cut(s) 173
PspN4I GGNNCC 2 cut(s) 205, 1184
PspPI GGNCC 3 cut(s) 113, 203, 907
PstI CTGCAG 1 cut(s) 646
PsuI RGATCY 1 cut(s) 531
RsaI GTAC 3 cut(s) 160, 175, 1433
RsaNI GTAC 3 cut(s) 159, 174, 1432
RseI CAYNNNNRTG 3 cut(s) 792, 1194, 1304
SacI GAGCTC 2 cut(s) 268, 294
SaqAI TTAA 3 cut(s) 1043, 1098, 1170
SatI GCNGC 4 cut(s) 125, 179, 567, 642
Sau3AI GATC 7 cut(s) 48, 531, 589, 766, 1074, 1156, 1426
Sau96I GGNCC 3 cut(s) 113, 203, 907
SchI GAGTC 4 cut(s) 277, 310, 481, 1172
ScrFI CCNGG 2 cut(s) 111, 1284
SduI GDGCHC 4 cut(s) 268, 294, 503, 587
SfaNI GCATC 3 cut(s) 154, 1058, 1129
SfcI CTRYAG 3 cut(s) 324, 642, 1411
SfuI TTCGAA 1 cut(s) 491
SinI GGWCC 1 cut(s) 203
SmiMI CAYNNNNRTG 3 cut(s) 792, 1194, 1304
SmlI CTYRAG 3 cut(s) 267, 418, 677
SmoI CTYRAG 3 cut(s) 267, 418, 677
Sse9I AATT 5 cut(s) 243, 517, 926, 960, 1147
SseBI AGGCCT 1 cut(s) 310
SsiI CCGC 2 cut(s) 830, 940
SstI GAGCTC 2 cut(s) 268, 294
StuI AGGCCT 1 cut(s) 310
StyD4I CCNGG 2 cut(s) 109, 1282
StyI CCWWGG 1 cut(s) 1195
TaaI ACNGT 1 cut(s) 755
TaiI ACGT 4 cut(s) 433, 548, 614, 657
TaqI TCGA 5 cut(s) 480, 491, 560, 750, 1224
TasI AATT 5 cut(s) 243, 517, 926, 960, 1147
TatI WGTACW 2 cut(s) 158, 1431
TfiI GAWTC 3 cut(s) 482, 741, 1365
Tru1I TTAA 3 cut(s) 1043, 1098, 1170
Tru9I TTAA 3 cut(s) 1043, 1098, 1170
TscAI CASTG 6 cut(s) 358, 990, 1008, 1084, 1306, 1366
TseI GCWGC 4 cut(s) 124, 178, 566, 641
TspDTI ATGAA 6 cut(s) 25, 39, 240, 816, 914, 1240
TspGWI ACGGA 2 cut(s) 216, 394
TspRI CASTG 6 cut(s) 358, 990, 1008, 1084, 1306, 1366
Van91I CCANNNNNTGG 1 cut(s) 861
VpaK11BI GGWCC 1 cut(s) 203
XagI CCTNNNNNAGG 1 cut(s) 132
XceI RCATGY 2 cut(s) 727, 1390
XmnI GAANNNNTTC 2 cut(s) 533, 605
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.