pycom12g21380

FRIGIDA-like protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Reverse (-)
22547237 .. 22552228
4992 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g21380.2

Sequence Viewer

Length: 3780 bp
ATGGAGAAGATAGAGGCAGAATTGAAGGAGGCGGAGACGAAGCAGAGGAGTCTGAGCAAGGCGTACGAGTGCATACACGCGCAGGCAACAGCGCTTATTATCTTCGCCGTGCAATGGAAGGACCTGGAGGAGCACTTTGAGTCGACTCGGTACTCGCTCGGGTCGCGATTCCGGGAACTCGCCCACCGCGAGACGGTGGTCCGTGTGCGGGACGAGGAGTTGGCGGCGAAGGAGATGAAGTTCAACTCGGAAATTGAATCGAAAGCGGACGAGTTGGGGAGGATTCAGAGTCTGATCGATGAGAAGGCTGAGGAGGTTATACAGAGTAAGAACCACTTGTACTCTCTCCAGTCTTTGATTCTGGAACATAATAATGAGGTTATGGTGCAAGAAAAGAGGTTGATGGAGGTTGAGAGTTTTGTTGGGGAGAAGAAGAGGGAGTGCGATTCGATTGAGAGACGGGTTAAGGAGCGGATGAAGAAGTTGAATTGGGTTGAGAGAATGGTGGACGAGAAGTCGAAATTGGCTGAGTTGAAGGCGGAGAAAGTGCGGGGGTTTGAAGAGGCGTTGGAAAAGTGTGTAGAGAAGACTGAGTTGAAGGAGAGGGAGTTGAATGAGATTATCGGGTCGATTGAGGAGCGCAAAGAGGAGTTCAGTTGGATAGGAGAGCAGATTTTGGAGGCGGAAAAGTTGATTAAGGTGCAAGAGGAGCAGTTGGATTTGAAAGAAGAGAAATTTAAGGAGGCGCAAAAGGCGGTTGAAGAGTGTGACAAAGAGTTGAAATTAAGAGAGGAGCGGATTAAGGAGGCGGAAAGGGCGGTTGAAGAATGTGACAAGGAGTTGAAAATGAAGAAGGAGAAACTTAGTGCGATAGAGAAATCGTTAGTGGAGTGCTTGAATGCCGTGGAATCAAGGGAGACAAAGATTAGGGAAATAGACTCGAAAAAAGATAAAGATTTTTGCTTGCGTGAGAGATCGTTGGAGGAGTGGTCCTGTAAGCTTGATTTCAAAGAGAGGGAACTTATATTGAAAGAGAGAAATGTCGAGTTAAAAGCTGGGGAACTCAGAAAGTCGAAAGAAGAAGGCGAAAAGTATTTGGAATCTCTCTCACAGGGACTTAAGGAGAAAGAGAACCAACTTCAAGGCTTTGACAAAGAGCTCAGATTGAAGCAGAAAGAAATTGATTTGATCAAAAAATCCACTGACGAACGCGCCAAAGACCTGGAATTGAAAGAGAGGCAACTTGAAGATCGGGCCAAAGAGCATTCGTTGAAGCAGAAAGAATTTGATTCGATCAAAAAGTTCACTGAAGAACGCGGCCAAAACCTTGAACTGAAAGAGAGGCAACTTGATGACCAAGCCAAAGAGCTTGAATTGAAGCATAAAGAATTTGATTCGATAAAAAAATTCTCTGAAGAACGCAGCCAAAAACTTAAACTGAAAGAGAGGCAACTTGAAGACCGAGCCAAAGAGCTTGAATTGAAGCATAAAGAGTTTGATTCGTTAAAAAAATTCAGCGAGGAACACACCCAAAACCTGAAAGCGAAAGAAAATACTAGTATTCTTCTTTCTCAAGTGAAAATTGAGCAATTGGAACATATCCCTGCCAACAATGCTGTTGTTCCTTCTCCCGCAAGTAACCAGTCCAGCGTCAATATGGATGGTAGAGGCTTGCTGTTGTTAATAAACGAGCATTTGAAGAACTATGTTCTAGTGGGTAGTGAAATCTCAGCTGTTCTTCAGGCATCCCCAGACCCGGCAAAACTGGTTTTGGATTCTATGCAAGGGTTGCACCATTCAAATTCAAGAGCGGACAAAAGCAGGTGTGGTTATGATTTGAGCATTACTAGAGTGAGCTGTATCCTTTTGTTGGAGACTTTAAAGAGTATCTCCCCCCAAATTAACCCTGAGGTGAAAGAAGAAGCAATTAAGTTGGCAGGTGATTGGAAGGTTAAAATGACGACTAGGATGGAGAATTGCTTGGAGGTTTTGGGTTTTCTGCGGTTTGTTAGTACATACGAAATCACCTCGTTTTATGATGCGATTCAAAGTCTTTGTGCGATCGTTGCTAAGGATGAACACACAACTGAATTATCCTGGCCCCTTGGTTTCACTGATAAGGCACCCGGGACTTTTTCTTCTCCGAATCTTCAACTATCTGACACCACAGATGCTAGTCATTTGCAGGGGGTTTTAAATGAGATTTTCAGTAGGGATTGTCTGTTGCAGAACGAAACTTGGGCTACTTTTCAAATGTCGTCAGATCCAGAAAAGTTTGTGATGGATGTGATGCAAACTTCTTTTGCTAAATACTGCACAGTAGAAGATGTTGGTTTTAGAGAAACTGTCATGTCGAAGTGCATTTCACTACTCGACAAGCTAATGAGAATTAAACCACATGTTGGACCTCATGTTAACAAAGATGCCCTAAAGCTAGCAGTCCACTGGAAATCGAAAATTGGTGCAGGCACCCAAGCCTTCGAACTTTTGGGTTTTTTGCAGTTCATAGCTACATATGGACTGCTTTCTATGTTTAATAGAGAGATTTTAGTGTTTCTTGGGAGGATTTCTCAGCAGGAGCAGGCACTAGAAGCATGTCAGACACTTGGTTTAGCTGATAAGATCCCTGATTTCATTCGGAATCTTATTGAAAAGAATCAACTAATTGAAGCTGTTCGATTGATTTGCCCGTTCAAGTTAATTGACAAGTTCCACCCAGTACCACTCTTGAAAGAATTTGTGGAGAATGCAAAGAGGTTGTGCATACAAAATAGCAAGAGAAGTAAATCACTTGATGAAAAGCACCATCTTCAATGTAAATACACATATACTGACGCATACTTTTTACGTTCACAGGATAAATGTATAAACAACCAGATTGCTGATCTTAGAGTTGTGATTCAATGTATCAAGGATTGCAAACTCGAGTTCGAGTACCCTTCCAGGTTCATTGAAACAAGAATAGCTTTTCTGGAAAAACTAAAGGAGGATCGGAGATGTCCAAAGATATCTCCTCCCTCCAAGGTTGAACAACACAATCAGAAAAATTCTCCGGTCTCCAAGGTTGAACAACAAGAGCAGAAAAAAGCTCCTGCCTCCAAAGTTGAGGGAAAAGAGCAGAAAAAGTCGCATGACCCTAGGGTTGAAGGACGAGAGCAGAAAAAGTCTGCTGCCTCCAAAGGTGCGGGGCAAGAGCAAAAAAAATCTCTCTCTAGGGTTGAGGGACAAGAGCAGATCAAATCTCTTGCCTCCAATGTCGAACAAGGGGCAGCAATGCCCCTTGCTTTCATTGTTGAGGGACGAGAGCAGAAAATATCTGTTCCCTCCAAGGTTGAACCAGAACACCACAGAAGTGGTCAGAAAGTTGAGGGACAAGAGCAGAAAAAATCTGCTGCCTCCACAGGTGCGGTGCAAGAGCAAAAAAAATCTCCGTTCTCCAATGTCGAACAAGGGGTAGAAAAGCCTCTTGCTTCCACTGTTGAGGGACAAGAGCAGAAAAGATCAGTTCCCTCTAAGGTTGAACCAGAACAACACAGAAGAGGTCAGAAACGTAGACCCAACACTTTGCCACATAGGTTTCAACCACAGCAACAGCGTCAAAGCAAGTATCATCGGACATCTGAATCAATCGGCCCAGGGTATCGGAAGCCATCTTTGTGGCATGAAAACTATAGACACCGTGGGCAGTTCGGTGGGGATGACAACAGCTATGAAATTGGTGCTAATGCTGGTACCGGTTTTACTGCCATCCCGAATCCTCGTCCTTGTGTTCCTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1260

Amino Acids

145.16

Weight (kDa)

6.91

Isoelectric Point (pI)

47.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1812, 1928
Acc36I ACCTGC 2 cut(s) 1812, 1928
Acc65I GGTACC 1 cut(s) 3731
AccB1I GGYRCC 3 cut(s) 2122, 2468, 3731
AccB7I CCANNNNNTGG 1 cut(s) 2402
AccBSI CCGCTC 3 cut(s) 472, 796, 1811
AccI GTMKAC 2 cut(s) 143, 3553
AccII CGCG 5 cut(s) 80, 166, 189, 1212, 1317
AclWI GGATC 3 cut(s) 2258, 2617, 2997
AcoI YGGCCR 1 cut(s) 1318
AcsI RAATTY 8 cut(s) 734, 1283, 1388, 1406, 1511, 1801, 2735, 3046
AcuI CTGAAG 3 cut(s) 1329, 1434, 1724
AfaI GTAC 7 cut(s) 65, 152, 341, 2014, 2721, 2936, 3733
AfeI AGCGCT 1 cut(s) 93
AfiI CCNNNNNNNGG 6 cut(s) 114, 193, 208, 1756, 1870, 2402
AflII CTTAAG 1 cut(s) 1118
AflIII ACRYGT 1 cut(s) 2398
AgeI ACCGGT 1 cut(s) 3734
AhdI GACNNNNNGTC 1 cut(s) 514
AhlI ACTAGT 1 cut(s) 1556
AjnI CCWGG 5 cut(s) 123, 1221, 2096, 2942, 3634
AjuI GAANNNNNNNTTGG 2 cut(s) 506, 538
AleI CACNNNNGTG 1 cut(s) 3351
AloI GAACNNNNNNTCC 2 cut(s) 224, 256
Alw21I GWGCWC 2 cut(s) 135, 1161
Alw26I GTCTC 6 cut(s) 29, 185, 451, 911, 1868, 3061
AlwI GGATC 3 cut(s) 2258, 2617, 2997
AlwNI CAGNNNCTG 1 cut(s) 292
Ama87I CYCGRG 3 cut(s) 158, 2126, 2924
Aor51HI AGCGCT 1 cut(s) 93
AoxI GGCC 4 cut(s) 1254, 1318, 2099, 3631
ApeKI GCWGC 4 cut(s) 1422, 3170, 3269, 3392
ApoI RAATTY 8 cut(s) 734, 1283, 1388, 1406, 1511, 1801, 2735, 3046
AsiGI ACCGGT 1 cut(s) 3734
Asp700I GAANNNNTTC 1 cut(s) 2673
Asp718I GGTACC 1 cut(s) 3731
AspA2I CCTAGG 1 cut(s) 3137
AspLEI GCGC 5 cut(s) 82, 94, 642, 748, 1214
AspS9I GGNCC 7 cut(s) 121, 199, 990, 1254, 2100, 2405, 3632
AsuC2I CCSGG 4 cut(s) 173, 1757, 2127, 2128
AsuHPI GGTGA 3 cut(s) 1924, 1952, 2017
AsuII TTCGAA 1 cut(s) 2481
AsuNHI GCTAGC 1 cut(s) 2434
AvaI CYCGRG 3 cut(s) 158, 2126, 2924
AvaII GGWCC 4 cut(s) 121, 199, 990, 2405
AvrII CCTAGG 1 cut(s) 3137
AxyI CCTNAGG 1 cut(s) 1908
BanI GGYRCC 3 cut(s) 2122, 2468, 3731
BanII GRGCYC 1 cut(s) 1161
BbsI GAAGAC 2 cut(s) 593, 1464
Bbv12I GWGCWC 2 cut(s) 135, 1161
BbvCI CCTCAGC 1 cut(s) 309
BbvI GCAGC 4 cut(s) 1434, 3157, 3281, 3379
BccI CCATC 7 cut(s) 397, 1655, 1963, 2275, 2814, 3658, 3755
BceAI ACGGC 2 cut(s) 92, 887
BcgI CGANNNNNNTGC 2 cut(s) 2667, 2701
BciT130I CCWGG 5 cut(s) 125, 1223, 2098, 2944, 3636
BciVI GTATCC 1 cut(s) 1871
BclI TGATCA 1 cut(s) 1188
BcnI CCSGG 4 cut(s) 173, 1757, 2127, 2128
BcoDI GTCTC 6 cut(s) 29, 185, 451, 911, 1868, 3061
BcuI ACTAGT 1 cut(s) 1556
BfaI CTAG 9 cut(s) 1557, 1712, 1848, 1965, 2175, 2435, 2588, 3138, 3213
BfmI CTRYAG 1 cut(s) 3670
BfoI RGCGCY 1 cut(s) 95
BfrI CTTAAG 1 cut(s) 1118
BfuAI ACCTGC 2 cut(s) 1812, 1928
BfuI GTATCC 1 cut(s) 1871
BisI GCNGC 6 cut(s) 225, 1318, 1423, 3171, 3270, 3393
BlnI CCTAGG 1 cut(s) 3137
BlsI GCNGC 6 cut(s) 226, 1319, 1424, 3172, 3271, 3394
Bme1390I CCNGG 9 cut(s) 125, 173, 1223, 1757, 2098, 2127, 2128, 2944, 3636
Bme18I GGWCC 4 cut(s) 121, 199, 990, 2405
BmeRI GACNNNNNGTC 1 cut(s) 514
BmeT110I CYCGRG 3 cut(s) 158, 2126, 2924
BmgT120I GGNCC 7 cut(s) 121, 199, 990, 1254, 2100, 2405, 3632
BmiI GGNNCC 4 cut(s) 2102, 2124, 2470, 3733
BmrFI CCNGG 9 cut(s) 125, 173, 1223, 1757, 2098, 2127, 2128, 2944, 3636
BmrI ACTGGG 1 cut(s) 2711
BmsI GCATC 5 cut(s) 1754, 2029, 2161, 2280, 2413
BmtI GCTAGC 1 cut(s) 2438
BmuI ACTGGG 1 cut(s) 2711
BoxI GACNNNNGTC 1 cut(s) 197
BpiI GAAGAC 2 cut(s) 593, 1464
BplI GAGNNNNNCTC 2 cut(s) 2554, 2586
BpmI CTGGAG 2 cut(s) 146, 332
Bpu10I CCTNAGC 2 cut(s) 309, 2070
Bpu14I TTCGAA 1 cut(s) 2481
BpuEI CTTGAG 1 cut(s) 1557
BpuMI CCSGG 4 cut(s) 173, 1757, 2127, 2128
Bsa29I ATCGAT 1 cut(s) 297
BsaI GGTCTC 1 cut(s) 3061
BsaWI WCCGGW 2 cut(s) 3052, 3734
BsaXI ACNNNNNCTCC 6 cut(s) 224, 254, 593, 623, 974, 1004
Bsc4I CCNNNNNNNGG 6 cut(s) 114, 193, 208, 1756, 1870, 2402
Bse118I RCCGGY 1 cut(s) 3734
Bse1I ACTGG 5 cut(s) 349, 1642, 1770, 2450, 2717
Bse21I CCTNAGG 1 cut(s) 1908
Bse3DI GCAATG 2 cut(s) 119, 3279
BseBI CCWGG 5 cut(s) 125, 1223, 2098, 2944, 3636
BseCI ATCGAT 1 cut(s) 297
BseGI GGATG 8 cut(s) 480, 1666, 1745, 1974, 2080, 2290, 3703, 3747
BseLI CCNNNNNNNGG 6 cut(s) 114, 193, 208, 1756, 1870, 2402
BseMI GCAATG 2 cut(s) 119, 3279
BseMII CTCAG 9 cut(s) 44, 300, 519, 582, 1078, 1174, 1743, 1899, 2585
BseNI ACTGG 5 cut(s) 349, 1642, 1770, 2450, 2717
BseXI GCAGC 4 cut(s) 1434, 3157, 3281, 3379
BseYI CCCAGC 1 cut(s) 1055
BsgI GTGCAG 2 cut(s) 2299, 2484
Bsh1236I CGCG 5 cut(s) 80, 166, 189, 1212, 1317
Bsh1285I CGRYCG 1 cut(s) 2064
BshFI GGCC 4 cut(s) 1256, 1320, 2101, 3633
BshNI GGYRCC 3 cut(s) 2122, 2468, 3731
BshTI ACCGGT 1 cut(s) 3734
BshVI ATCGAT 1 cut(s) 297
BsiEI CGRYCG 1 cut(s) 2064
BsiHKAI GWGCWC 2 cut(s) 135, 1161
BsiHKCI CYCGRG 3 cut(s) 158, 2126, 2924
BsiSI CCGG 5 cut(s) 172, 1757, 2127, 3053, 3735
BsiWI CGTACG 1 cut(s) 63
BslFI GGGAC 7 cut(s) 224, 1128, 2143, 3237, 3312, 3384, 3498
BslI CCNNNNNNNGG 6 cut(s) 114, 193, 208, 1756, 1870, 2402
BsmAI GTCTC 6 cut(s) 29, 185, 451, 911, 1868, 3061
BsmBI CGTCTC 3 cut(s) 29, 185, 451
BsmFI GGGAC 7 cut(s) 224, 1128, 2143, 3237, 3312, 3384, 3498
BsmI GAATGC 3 cut(s) 904, 1264, 2752
BsnI GGCC 4 cut(s) 1256, 1320, 2101, 3633
Bso31I GGTCTC 1 cut(s) 3061
BsoBI CYCGRG 3 cut(s) 158, 2126, 2924
Bsp119I TTCGAA 1 cut(s) 2481
Bsp1286I GDGCHC 2 cut(s) 135, 1161
Bsp68I TCGCGA 1 cut(s) 166
BspANI GGCC 4 cut(s) 1256, 1320, 2101, 3633
BspCNI CTCAG 9 cut(s) 45, 301, 520, 583, 1077, 1173, 1742, 1900, 2584
BspDI ATCGAT 1 cut(s) 297
BspFNI CGCG 5 cut(s) 80, 166, 189, 1212, 1317
BspLI GGNNCC 4 cut(s) 2102, 2124, 2470, 3733
BspMI ACCTGC 2 cut(s) 1812, 1928
BspOI GCTAGC 1 cut(s) 2438
BspPI GGATC 3 cut(s) 2258, 2617, 2997
BspT104I TTCGAA 1 cut(s) 2481
BspT107I GGYRCC 3 cut(s) 2122, 2468, 3731
BspTI CTTAAG 1 cut(s) 1118
BspTNI GGTCTC 1 cut(s) 3061
BsrBI CCGCTC 3 cut(s) 472, 796, 1811
BsrDI GCAATG 2 cut(s) 119, 3279
BsrFI RCCGGY 1 cut(s) 3734
BsrI ACTGG 5 cut(s) 349, 1642, 1770, 2450, 2717
BssAI RCCGGY 1 cut(s) 3734
BssT1I CCWWGG 5 cut(s) 2104, 3021, 3060, 3137, 3327
Bst2UI CCWGG 5 cut(s) 125, 1223, 2098, 2944, 3636
Bst4CI ACNGT 5 cut(s) 196, 2320, 2347, 3478, 3680
Bst6I CTCTTC 5 cut(s) 428, 555, 723, 756, 3532
BstAFI CTTAAG 1 cut(s) 1118
BstAPI GCANNNNNTGC 1 cut(s) 1789
BstBI TTCGAA 1 cut(s) 2481
BstC8I GCNNGC 6 cut(s) 84, 965, 1673, 2436, 2467, 2583
BstDSI CCRYGG 2 cut(s) 903, 3679
BstF5I GGATG 8 cut(s) 480, 1666, 1745, 1974, 2080, 2290, 3703, 3747
BstFNI CGCG 5 cut(s) 80, 166, 189, 1212, 1317
BstH2I RGCGCY 1 cut(s) 95
BstHHI GCGC 5 cut(s) 82, 94, 642, 748, 1214
BstMAI GTCTC 6 cut(s) 29, 185, 451, 911, 1868, 3061
BstMCI CGRYCG 1 cut(s) 2064
BstMWI GCNNNNNNNGC 8 cut(s) 163, 709, 752, 815, 1613, 1789, 2066, 2591
BstNI CCWGG 5 cut(s) 125, 1223, 2098, 2944, 3636
BstNSI RCATGY 2 cut(s) 2402, 2598
BstPAI GACNNNNGTC 1 cut(s) 197
BstSCI CCNGG 9 cut(s) 123, 171, 1221, 1755, 2096, 2125, 2126, 2942, 3634
BstSFI CTRYAG 1 cut(s) 3670
BstUI CGCG 5 cut(s) 80, 166, 189, 1212, 1317
BstV1I GCAGC 4 cut(s) 1434, 3157, 3281, 3379
BstV2I GAAGAC 2 cut(s) 593, 1464
BstX2I RGATCY 2 cut(s) 2263, 2622
BstXI CCANNNNNNTGG 3 cut(s) 1222, 3353, 3657
BstYI RGATCY 2 cut(s) 2263, 2622
Bsu15I ATCGAT 1 cut(s) 297
Bsu36I CCTNAGG 1 cut(s) 1908
BsuI GTATCC 1 cut(s) 1871
BsuRI GGCC 4 cut(s) 1256, 1320, 2101, 3633
BsuTUI ATCGAT 1 cut(s) 297
BtgI CCRYGG 2 cut(s) 903, 3679
BtsCI GGATG 8 cut(s) 480, 1666, 1745, 1974, 2080, 2290, 3703, 3747
BtsIMutI CAGTG 5 cut(s) 1200, 1305, 2112, 2443, 3474
BtuMI TCGCGA 1 cut(s) 166
BveI ACCTGC 2 cut(s) 1812, 1928
Cac8I GCNNGC 6 cut(s) 84, 965, 1673, 2436, 2467, 2583
CaiI CAGNNNCTG 1 cut(s) 292
CfoI GCGC 5 cut(s) 82, 94, 642, 748, 1214
Cfr10I RCCGGY 1 cut(s) 3734
Cfr13I GGNCC 7 cut(s) 121, 199, 990, 1254, 2100, 2405, 3632
Cfr9I CCCGGG 1 cut(s) 2126
ClaI ATCGAT 1 cut(s) 297
CseI GACGC 3 cut(s) 1639, 2843, 3584
Csp6I GTAC 7 cut(s) 64, 151, 340, 2013, 2720, 2935, 3732
CspAI ACCGGT 1 cut(s) 3734
CviAII CATG 6 cut(s) 2350, 2399, 2411, 2595, 3131, 3662
CviQI GTAC 7 cut(s) 64, 151, 340, 2013, 2720, 2935, 3732
DraI TTTAAA 2 cut(s) 1881, 2196
DriI GACNNNNNGTC 1 cut(s) 514
EaeI YGGCCR 1 cut(s) 1318
Eam1104I CTCTTC 5 cut(s) 428, 555, 723, 756, 3532
Eam1105I GACNNNNNGTC 1 cut(s) 514
EarI CTCTTC 5 cut(s) 428, 555, 723, 756, 3532
EciI GGCGGA 4 cut(s) 47, 554, 698, 824
Ecl136II GAGCTC 1 cut(s) 1159
Eco130I CCWWGG 5 cut(s) 2104, 3021, 3060, 3137, 3327
Eco24I GRGCYC 1 cut(s) 1161
Eco31I GGTCTC 1 cut(s) 3061
Eco32I GATATC 1 cut(s) 3009
Eco47I GGWCC 4 cut(s) 121, 199, 990, 2405
Eco47III AGCGCT 1 cut(s) 93
Eco53kI GAGCTC 1 cut(s) 1159
Eco57I CTGAAG 3 cut(s) 1329, 1434, 1724
Eco81I CCTNAGG 1 cut(s) 1908
Eco88I CYCGRG 3 cut(s) 158, 2126, 2924
EcoICRI GAGCTC 1 cut(s) 1159
EcoO109I RGGNCCY 1 cut(s) 121
EcoRII CCWGG 5 cut(s) 123, 1221, 2096, 2942, 3634
EcoRV GATATC 1 cut(s) 3009
EcoT14I CCWWGG 5 cut(s) 2104, 3021, 3060, 3137, 3327
EcoT38I GRGCYC 1 cut(s) 1161
ErhI CCWWGG 5 cut(s) 2104, 3021, 3060, 3137, 3327
Esp3I CGTCTC 3 cut(s) 29, 185, 451
FaeI CATG 6 cut(s) 2353, 2402, 2414, 2598, 3134, 3665
FalI AAGNNNNNCTT 4 cut(s) 320, 352, 2950, 2982
FaqI GGGAC 7 cut(s) 224, 1128, 2143, 3237, 3312, 3384, 3498
FatI CATG 6 cut(s) 2349, 2398, 2410, 2594, 3130, 3661
FauI CCCGC 4 cut(s) 201, 543, 1639, 3178
FauNDI CATATG 1 cut(s) 2515
FbaI TGATCA 1 cut(s) 1188
FblI GTMKAC 2 cut(s) 143, 3553
Fnu4HI GCNGC 6 cut(s) 225, 1318, 1423, 3171, 3270, 3393
FokI GGATG 8 cut(s) 487, 1673, 1732, 1981, 2087, 2297, 3710, 3734
FriOI GRGCYC 1 cut(s) 1161
Fsp4HI GCNGC 6 cut(s) 225, 1318, 1423, 3171, 3270, 3393
FspBI CTAG 9 cut(s) 1557, 1712, 1848, 1965, 2175, 2435, 2588, 3138, 3213
GlaI GCGC 5 cut(s) 81, 93, 641, 747, 1213
GluI GCNGC 6 cut(s) 225, 1318, 1423, 3171, 3270, 3393
GsaI CCCAGC 1 cut(s) 1059
GsuI CTGGAG 2 cut(s) 146, 332
HaeII RGCGCY 1 cut(s) 95
HaeIII GGCC 4 cut(s) 1256, 1320, 2101, 3633
HapII CCGG 5 cut(s) 172, 1757, 2127, 3053, 3735
HgaI GACGC 3 cut(s) 1639, 2843, 3584
HhaI GCGC 5 cut(s) 82, 94, 642, 748, 1214
Hin1II CATG 6 cut(s) 2353, 2402, 2414, 2598, 3134, 3665
Hin6I GCGC 5 cut(s) 80, 92, 640, 746, 1212
HinP1I GCGC 5 cut(s) 80, 92, 640, 746, 1212
HincII GTYRAC 2 cut(s) 144, 2416
HindII GTYRAC 2 cut(s) 144, 2416
HindIII AAGCTT 1 cut(s) 998
HpaI GTTAAC 1 cut(s) 2416
HpaII CCGG 5 cut(s) 172, 1757, 2127, 3053, 3735
HphI GGTGA 3 cut(s) 1924, 1952, 2017
Hpy166II GTNNAC 7 cut(s) 144, 508, 1305, 2416, 2443, 2852, 3554
Hpy188III TCNNGA 8 cut(s) 165, 362, 1806, 2267, 2728, 2972, 3751, 3773
Hpy8I GTNNAC 7 cut(s) 144, 508, 1305, 2416, 2443, 2852, 3554
HpyCH4III ACNGT 5 cut(s) 196, 2320, 2347, 3478, 3680
HpyCH4IV ACGT 2 cut(s) 2848, 3550
HpyF10VI GCNNNNNNNGC 8 cut(s) 163, 709, 752, 815, 1613, 1789, 2066, 2591
HpySE526I ACGT 2 cut(s) 2848, 3550
Hsp92II CATG 6 cut(s) 2353, 2402, 2414, 2598, 3134, 3665
HspAI GCGC 5 cut(s) 80, 92, 640, 746, 1212
KpnI GGTACC 1 cut(s) 3735
Ksp22I TGATCA 1 cut(s) 1188
KspAI GTTAAC 1 cut(s) 2416
LmnI GCTCC 7 cut(s) 130, 469, 637, 709, 793, 2578, 3094
Lsp1109I GCAGC 4 cut(s) 1434, 3157, 3281, 3379
LweI GCATC 5 cut(s) 1754, 2029, 2161, 2280, 2413
MaeI CTAG 9 cut(s) 1557, 1712, 1848, 1965, 2175, 2435, 2588, 3138, 3213
MaeII ACGT 2 cut(s) 2848, 3550
MaeIII GTNAC 3 cut(s) 767, 830, 1637
MbiI CCGCTC 3 cut(s) 472, 796, 1811
MfeI CAATTG 1 cut(s) 1589
MflI RGATCY 2 cut(s) 2263, 2622
MhlI GDGCHC 2 cut(s) 135, 1161
MlyI GAGTC 5 cut(s) 58, 139, 149, 298, 932
MmeI TCCRAC 6 cut(s) 549, 638, 696, 960, 1851, 2383
MroXI GAANNNNTTC 1 cut(s) 2673
MslI CAYNNNNRTG 3 cut(s) 372, 3351, 3655
MspA1I CMGCKG 1 cut(s) 1733
MspCI CTTAAG 1 cut(s) 1118
MspI CCGG 5 cut(s) 172, 1757, 2127, 3053, 3735
MspR9I CCNGG 9 cut(s) 125, 173, 1223, 1757, 2098, 2127, 2128, 2944, 3636
MunI CAATTG 1 cut(s) 1589
Mva1269I GAATGC 3 cut(s) 904, 1264, 2752
MvaI CCWGG 5 cut(s) 125, 1223, 2098, 2944, 3636
MvnI CGCG 5 cut(s) 80, 166, 189, 1212, 1317
MwoI GCNNNNNNNGC 8 cut(s) 163, 709, 752, 815, 1613, 1789, 2066, 2591
NciI CCSGG 4 cut(s) 173, 1757, 2127, 2128
NdeI CATATG 1 cut(s) 2515
NheI GCTAGC 1 cut(s) 2434
NlaIII CATG 6 cut(s) 2353, 2402, 2414, 2598, 3134, 3665
NlaIV GGNNCC 4 cut(s) 2102, 2124, 2470, 3733
NmuCI GTSAC 2 cut(s) 767, 830
NruI TCGCGA 1 cut(s) 166
NspI RCATGY 2 cut(s) 2402, 2598
NspV TTCGAA 1 cut(s) 2481
OliI CACNNNNGTG 1 cut(s) 3351
PaeR7I CTCGAG 1 cut(s) 2924
PaqCI CACCTGC 2 cut(s) 1812, 1928
PasI CCCWGGG 1 cut(s) 3635
PciI ACATGT 1 cut(s) 2398
PcsI WCGNNNNNNNCGW 1 cut(s) 186
PctI GAATGC 3 cut(s) 904, 1264, 2752
PdmI GAANNNNTTC 1 cut(s) 2673
Pfl23II CGTACG 1 cut(s) 63
PflMI CCANNNNNTGG 1 cut(s) 2402
PfoI TCCNGGA 1 cut(s) 171
PinAI ACCGGT 1 cut(s) 3734
PkrI GCNGC 6 cut(s) 226, 1319, 1424, 3172, 3271, 3394
Ple19I CGATCG 1 cut(s) 2064
PleI GAGTC 5 cut(s) 57, 139, 148, 297, 932
PpsI GAGTC 5 cut(s) 57, 139, 148, 297, 932
PpuMI RGGWCCY 1 cut(s) 121
PscI ACATGT 1 cut(s) 2398
PshAI GACNNNNGTC 1 cut(s) 197
Psp124BI GAGCTC 1 cut(s) 1161
Psp5II RGGWCCY 1 cut(s) 121
Psp6I CCWGG 5 cut(s) 123, 1221, 2096, 2942, 3634
PspFI CCCAGC 1 cut(s) 1055
PspGI CCWGG 5 cut(s) 123, 1221, 2096, 2942, 3634
PspLI CGTACG 1 cut(s) 63
PspN4I GGNNCC 4 cut(s) 2102, 2124, 2470, 3733
PspPI GGNCC 7 cut(s) 121, 199, 990, 1254, 2100, 2405, 3632
PspPPI RGGWCCY 1 cut(s) 121
PspXI VCTCGAGB 1 cut(s) 2924
PsrI GAACNNNNNNTAC 2 cut(s) 323, 355
PstNI CAGNNNCTG 1 cut(s) 292
PsuI RGATCY 2 cut(s) 2263, 2622
PvuI CGATCG 1 cut(s) 2064
PvuII CAGCTG 1 cut(s) 1733
RruI TCGCGA 1 cut(s) 166
RsaI GTAC 7 cut(s) 65, 152, 341, 2014, 2721, 2936, 3733
RsaNI GTAC 7 cut(s) 64, 151, 340, 2013, 2720, 2935, 3732
RseI CAYNNNNRTG 3 cut(s) 372, 3351, 3655
SacI GAGCTC 1 cut(s) 1161
SalI GTCGAC 1 cut(s) 142
SatI GCNGC 6 cut(s) 225, 1318, 1423, 3171, 3270, 3393
Sau96I GGNCC 7 cut(s) 121, 199, 990, 1254, 2100, 2405, 3632
SchI GAGTC 5 cut(s) 58, 139, 149, 298, 932
ScrFI CCNGG 9 cut(s) 125, 173, 1223, 1757, 2098, 2127, 2128, 2944, 3636
SduI GDGCHC 2 cut(s) 135, 1161
SfaNI GCATC 5 cut(s) 1754, 2029, 2161, 2280, 2413
SfcI CTRYAG 1 cut(s) 3670
Sfr274I CTCGAG 1 cut(s) 2924
SfuI TTCGAA 1 cut(s) 2481
SinI GGWCC 4 cut(s) 121, 199, 990, 2405
SlaI CTCGAG 1 cut(s) 2924
SmaI CCCGGG 1 cut(s) 2128
SmiMI CAYNNNNRTG 3 cut(s) 372, 3351, 3655
SmlI CTYRAG 3 cut(s) 1118, 1572, 2924
SmoI CTYRAG 3 cut(s) 1118, 1572, 2924
SpeI ACTAGT 1 cut(s) 1556
SspMI CTAG 9 cut(s) 1557, 1712, 1848, 1965, 2175, 2435, 2588, 3138, 3213
SstI GAGCTC 1 cut(s) 1161
StyD4I CCNGG 9 cut(s) 123, 171, 1221, 1755, 2096, 2125, 2126, 2942, 3634
StyI CCWWGG 5 cut(s) 2104, 3021, 3060, 3137, 3327
TaaI ACNGT 5 cut(s) 196, 2320, 2347, 3478, 3680
TaiI ACGT 2 cut(s) 2851, 3553
TaqII GACCGA 1 cut(s) 1476
TatI WGTACW 2 cut(s) 339, 2012
TauI GCSGC 2 cut(s) 227, 1320
TscAI CASTG 5 cut(s) 1207, 1312, 2119, 2450, 3481
TseFI GTSAC 2 cut(s) 767, 830
TseI GCWGC 4 cut(s) 1422, 3170, 3269, 3392
Tsp45I GTSAC 2 cut(s) 767, 830
TspGWI ACGGA 2 cut(s) 191, 3420
TspMI CCCGGG 1 cut(s) 2126
TspRI CASTG 5 cut(s) 1207, 1312, 2119, 2450, 3481
Van91I CCANNNNNTGG 1 cut(s) 2402
Vha464I CTTAAG 1 cut(s) 1118
VpaK11BI GGWCC 4 cut(s) 121, 199, 990, 2405
XapI RAATTY 8 cut(s) 734, 1283, 1388, 1406, 1511, 1801, 2735, 3046
XceI RCATGY 2 cut(s) 2402, 2598
XcmI CCANNNNNNNNNTGG 1 cut(s) 1654
XhoI CTCGAG 1 cut(s) 2924
XmaI CCCGGG 1 cut(s) 2126
XmaJI CCTAGG 1 cut(s) 3137
XmiI GTMKAC 2 cut(s) 143, 3553
XmnI GAANNNNTTC 1 cut(s) 2673
XspI CTAG 9 cut(s) 1557, 1712, 1848, 1965, 2175, 2435, 2588, 3138, 3213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.