FvH4_5g20491

FRIGIDA-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000126
Physical Location & Seq
Forward (+)
12156124 .. 12161375
5252 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g20491.t2

Sequence Viewer

Length: 2355 bp
ATGGCGGAATGTTCTGATAGAAATGAATCGAGAGAGGGAGAGATGAGGGAAATGTGTGGTGATTTGGGTTTGGTTAAGAAGTTGGTCGAGGAGTGGTGCGGTAAGGTGGAGTTGAAAGAGAAGGGGATTGATGAGTGTGTTGCCAAGCTTGAATTGAAGGAGAAAGAATTCGAGTCGAGATTCGGGGAGCTTAGTGTGATTGATAAGAGGGTTAATGAGTGTCTTGACGATGTTGAGATGAAGGAAAAGGAGTTGGATTCAGTTGTGAAGCTGATACTAGATGAGAAACTGAAATTGGATTGGCAGCAAATGTCGGTTGAAGAGACCGAGAAGCGGTTGGGTTCGGTGTCGAGTGGACTGGAAAGAAAAGAGAGGGAACTTGAAGTGCAACAACAACAAATTGGTTCGGTTTACCAAATGTTTCAGATGAAAGAGAATGAACTTGAACAGCAGGCTCAAGAGGTTGAGTTGAAACGCCAGCAAATTGAGTCACTTTGCCATCTGTTTCAGATGAAAGAGGGGCAGCTTGAAAAGCAAGCTCAAGACCTTGAAACGAAACACAAACAAATTGAATCAATGCGCCATCTGTTTCGGATGAAACAGGGGCAGCTTGAAAATCAAGCCAAGGAGCTTAGGTTCAAGCAGCAACAAACTGATTCATTCTCTCAATCACTTATCATCAAAGAAAGGGCACTTGAACAGCGGGAAAAAGAGATTGAACCAAAACAACAACAAATTGTTTCAGTTTCGCAGACACTTCAGATGAAAGAGAGGAGACTTGAACAACAGGCGAAAGAGCTTGAGTTGAAACAAAAACAATTTATTTCTCAGGTGAAGATGGTCCAATCTAGAACTGCCACCGGTCCTTCATCTGCAACTGATGAATTCAGGTCCATCATCAATATGGATGGCAGAGGCTTGCAGTTTTTCATGACTGAACAATTGAAAGTGATTGATTCAATGCGTACTCAAATGTCCGCTGCTTTTCAAGTATCGTCAGACCCAGGAAATTTGGTTTTGGATGCAATGCAAGGATTTTACCCTTCAAATTCAAATCTGGAAAACAAGGACACTGATTTTGATCTGAGCTTTATTAGAAGGAGTTGTATTCTTCTGTTACAGGAGCTAGAGAGGATGTCACCTAAAATTAATCCTGGGGTGAGAGAAAAAGCACTAAAGTTGGCAGCTCATTGGAAATCCAACCTGACAGTGGCCTCTGGTGATTCGGTGGAGGTCTTGGGATTTTTGCGGCTTGTAACTGCGTTTGAATTATCCTCTGCATATGATGCCAATGAGCTTCAGAGTCTTCTTTCTCTAGTTTCTCATCCTGAACAAGCAGCTGAATTAAGCAGGGCTCTTGGTGTCAAATATAAGGAACCTTCCAACAGCATTTCTTCCCTTGTCAAAGTGGTAGAACCAGCATCTACCAATGCAGCAACCTTTCCTTCTTCAAATATTCAACCAAATGTCGCTACGGATGCAAGGGATGGGTCGGGGTGTAGAAATGGGCCTTTCAGAAAGAATCATTCTATACTGGCTGCTTCTGTTCCAATGTCATCAGACCCAGCTAAATTCGTGTTGGATAGCATCCAAAAATCTCTTGCTCAATACTTGCAAAATGGAGATTGTGAAGAAAGTATCATGTCAAGTAACATTTCCCTGTTGGAGGCGCTAATGAGAGTCTCACCGCATGTTGGACCTAATCTGAAAGCAGAAGCAACAAAGCTATCAGTCCAGTGGAAAGCAAAGATGGCAGGAAATATTGAGAAGTCATTGGAGGGTGTTGGATTTTTGCTTTTTTTAGCGACATATGGATTGGTTTCTATGTTAAATACTGATGAGATTATAAAGCATCTTGGGTTTATTTGTCAGCATAAACAGGCTCTAGAATTATGCCAGACGCATGATTTTGCAGATAAGATTGGTGAATTTATCCAGATCCTTGTTGAAAAGAAGCAACTTGTTGAGGCTGTTAGATTTATTTTTGCGTTCAAGTTAACTGACAAGCTTCCCCCAGTCCAACTTTTAAAAGAATATGTGGAGGATAAGAAAAAGTGTTCTGAAGCAATTTCCATGTTGCAGATATCACATGATGAAAAGGAGGTGGTGGTGGTAGATGGTCTATTAAGTGATCTAAGAGCTGTGGATCAATACATTAAGGATAACAATCTTGAGTCTGAATACCCATCCCCAGACATTGAAATGCAAATAGCTAAGCTGGAAAGAGTAAAGGCAGATTGGAGGCACGCTGTGTCTTCCCCTGGTTCCATTGTTGAACAGAAAGAGCAGAGAAAAAGGAAGAAACCTAGTGCTGGCACTTCAACCCTCGAGTTCCAACCACCACATCAGGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida

Protein Analysis

785

Amino Acids

88.93

Weight (kDa)

5.54

Isoelectric Point (pI)

49.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 301 - 459 1.5e-36 Frigida-like protein
Frigida PF07899 520 - 752 5.6e-51 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1847
AciI CCGC 7 cut(s) 5, 99, 334, 703, 978, 1249, 1688
AclWI GGATC 2 cut(s) 1933, 2154
AcsI RAATTY 6 cut(s) 167, 884, 1009, 1048, 1571, 1928
AcuI CTGAAG 3 cut(s) 743, 1283, 2082
AdeI CACNNNGTG 1 cut(s) 2251
AfaI GTAC 1 cut(s) 967
AfiI CCNNNNNNNGG 5 cut(s) 333, 1210, 1666, 1694, 2312
AgeI ACCGGT 1 cut(s) 860
AjnI CCWGG 3 cut(s) 1003, 1153, 2260
AjuI GAANNNNNNNTTGG 2 cut(s) 278, 310
AloI GAACNNNNNNTCC 2 cut(s) 620, 652
Alw26I GTCTC 3 cut(s) 317, 769, 1687
AlwI GGATC 2 cut(s) 1933, 2154
Ama87I CYCGRG 1 cut(s) 2327
AoxI GGCC 3 cut(s) 1212, 1508, 2349
ApeKI GCWGC 9 cut(s) 304, 523, 607, 643, 980, 1184, 1337, 1433, 1538
ApoI RAATTY 6 cut(s) 167, 884, 1009, 1048, 1571, 1928
ArsI GACNNNNNNTTYG 2 cut(s) 1061, 1093
AseI ATTAAT 1 cut(s) 1149
AsiGI ACCGGT 1 cut(s) 860
Asp700I GAANNNNTTC 1 cut(s) 167
AspLEI GCGC 2 cut(s) 582, 1672
AspS9I GGNCC 5 cut(s) 841, 863, 891, 1508, 1697
AsuHPI GGTGA 7 cut(s) 71, 844, 1131, 1171, 1232, 1677, 1937
AvaI CYCGRG 1 cut(s) 2327
AvaII GGWCC 4 cut(s) 841, 863, 891, 1697
BaeGI GKGCMC 1 cut(s) 694
BanII GRGCYC 1 cut(s) 1357
BbsI GAAGAC 2 cut(s) 1298, 2247
BbvI GCAGC 9 cut(s) 316, 535, 619, 655, 967, 1196, 1349, 1445, 1525
BccI CCATC 9 cut(s) 507, 591, 832, 902, 902, 1481, 1744, 2111, 2194
BciT130I CCWGG 3 cut(s) 1005, 1155, 2262
BcoDI GTCTC 3 cut(s) 317, 769, 1687
BfaI CTAG 6 cut(s) 278, 849, 1127, 1316, 1886, 2307
BfoI RGCGCY 1 cut(s) 1673
BlpI GCTNAGC 1 cut(s) 2214
Bme1390I CCNGG 3 cut(s) 1005, 1155, 2262
Bme18I GGWCC 4 cut(s) 841, 863, 891, 1697
BmeT110I CYCGRG 1 cut(s) 2327
BmgT120I GGNCC 5 cut(s) 841, 863, 891, 1508, 1697
BmiI GGNNCC 2 cut(s) 1377, 2266
BmrFI CCNGG 3 cut(s) 1005, 1155, 2262
BmrI ACTGGG 1 cut(s) 2009
BmsI GCATC 6 cut(s) 1012, 1276, 1430, 1468, 1596, 1861
BmuI ACTGGG 1 cut(s) 2009
BpiI GAAGAC 2 cut(s) 1298, 2247
Bpu10I CCTNAGC 1 cut(s) 632
Bpu1102I GCTNAGC 1 cut(s) 2214
BpuEI CTTGAG 4 cut(s) 441, 525, 821, 2192
BsaBI GATNNNNATC 2 cut(s) 1080, 2166
BsaI GGTCTC 1 cut(s) 317
BsaJI CCNNGG 4 cut(s) 624, 1003, 1154, 2260
BsaWI WCCGGW 1 cut(s) 860
BsaXI ACNNNNNCTCC 2 cut(s) 620, 650
Bsc4I CCNNNNNNNGG 5 cut(s) 333, 1210, 1666, 1694, 2312
Bse118I RCCGGY 1 cut(s) 860
Bse1I ACTGG 4 cut(s) 363, 1539, 1735, 2015
Bse3DI GCAATG 1 cut(s) 1032
Bse8I GATNNNNATC 2 cut(s) 1080, 2166
BseBI CCWGG 3 cut(s) 1005, 1155, 2262
BseDI CCNNGG 4 cut(s) 624, 1003, 1154, 2260
BseGI GGATG 9 cut(s) 600, 913, 1027, 1140, 1324, 1483, 1492, 1587, 2186
BseJI GATNNNNATC 2 cut(s) 1080, 2166
BseLI CCNNNNNNNGG 5 cut(s) 333, 1210, 1666, 1694, 2312
BseMI GCAATG 1 cut(s) 1032
BseMII CTCAG 2 cut(s) 842, 1076
BseNI ACTGG 4 cut(s) 363, 1539, 1735, 2015
BseRI GAGGAG 2 cut(s) 104, 787
BseSI GKGCMC 1 cut(s) 694
BseXI GCAGC 9 cut(s) 316, 535, 619, 655, 967, 1196, 1349, 1445, 1525
BseYI CCCAGC 1 cut(s) 1564
BshFI GGCC 3 cut(s) 1214, 1510, 2351
BshTI ACCGGT 1 cut(s) 860
BsiHKCI CYCGRG 1 cut(s) 2327
BsiSI CCGG 1 cut(s) 861
BslI CCNNNNNNNGG 5 cut(s) 333, 1210, 1666, 1694, 2312
BsmAI GTCTC 3 cut(s) 317, 769, 1687
BsnI GGCC 3 cut(s) 1214, 1510, 2351
Bso31I GGTCTC 1 cut(s) 317
BsoBI CYCGRG 1 cut(s) 2327
Bsp1286I GDGCHC 2 cut(s) 694, 1357
Bsp143I GATC 4 cut(s) 1081, 1938, 2131, 2146
Bsp1720I GCTNAGC 1 cut(s) 2214
BspACI CCGC 7 cut(s) 5, 99, 334, 703, 978, 1249, 1688
BspANI GGCC 3 cut(s) 1214, 1510, 2351
BspCNI CTCAG 2 cut(s) 841, 1077
BspHI TCATGA 1 cut(s) 930
BspLI GGNNCC 2 cut(s) 1377, 2266
BspPI GGATC 2 cut(s) 1933, 2154
BspTNI GGTCTC 1 cut(s) 317
BsrDI GCAATG 1 cut(s) 1032
BsrFI RCCGGY 1 cut(s) 860
BsrI ACTGG 4 cut(s) 363, 1539, 1735, 2015
BssAI RCCGGY 1 cut(s) 860
BssECI CCNNGG 4 cut(s) 624, 1003, 1154, 2260
BssMI GATC 4 cut(s) 1081, 1938, 2131, 2146
BssT1I CCWWGG 1 cut(s) 624
Bst2UI CCWGG 3 cut(s) 1005, 1155, 2262
Bst4CI ACNGT 1 cut(s) 1210
Bst6I CTCTTC 1 cut(s) 315
BstAPI GCANNNNNTGC 1 cut(s) 1286
BstC8I GCNNGC 6 cut(s) 453, 479, 537, 920, 2247, 2314
BstDEI CTNAG 6 cut(s) 191, 632, 828, 1085, 2135, 2214
BstENI CCTNNNNNAGG 1 cut(s) 1664
BstF5I GGATG 9 cut(s) 600, 913, 1027, 1140, 1324, 1483, 1492, 1587, 2186
BstH2I RGCGCY 1 cut(s) 1673
BstHHI GCGC 2 cut(s) 582, 1672
BstKTI GATC 4 cut(s) 1084, 1941, 2134, 2149
BstMAI GTCTC 3 cut(s) 317, 769, 1687
BstMBI GATC 4 cut(s) 1081, 1938, 2131, 2146
BstMWI GCNNNNNNNGC 4 cut(s) 532, 1286, 1478, 1751
BstNI CCWGG 3 cut(s) 1005, 1155, 2262
BstNSI RCATGY 1 cut(s) 1694
BstSCI CCNGG 3 cut(s) 1003, 1153, 2260
BstSLI GKGCMC 1 cut(s) 694
BstV1I GCAGC 9 cut(s) 316, 535, 619, 655, 967, 1196, 1349, 1445, 1525
BstV2I GAAGAC 2 cut(s) 1298, 2247
BstX2I RGATCY 1 cut(s) 1938
BstYI RGATCY 1 cut(s) 1938
BsuRI GGCC 3 cut(s) 1214, 1510, 2351
BtsCI GGATG 9 cut(s) 600, 913, 1027, 1140, 1324, 1483, 1492, 1587, 2186
BtsIMutI CAGTG 3 cut(s) 1071, 1215, 1742
Cac8I GCNNGC 6 cut(s) 453, 479, 537, 920, 2247, 2314
CciI TCATGA 1 cut(s) 930
CfoI GCGC 2 cut(s) 582, 1672
Cfr10I RCCGGY 1 cut(s) 860
Cfr13I GGNCC 5 cut(s) 841, 863, 891, 1508, 1697
CseI GACGC 1 cut(s) 1909
Csp6I GTAC 1 cut(s) 966
CspAI ACCGGT 1 cut(s) 860
CviAII CATG 6 cut(s) 931, 1642, 1691, 1904, 2074, 2090
CviQI GTAC 1 cut(s) 966
DdeI CTNAG 6 cut(s) 191, 632, 828, 1085, 2135, 2214
DpnI GATC 4 cut(s) 1083, 1940, 2133, 2148
DpnII GATC 4 cut(s) 1081, 1938, 2131, 2146
DraI TTTAAA 1 cut(s) 2028
DraIII CACNNNGTG 1 cut(s) 2251
Eam1104I CTCTTC 1 cut(s) 315
EarI CTCTTC 1 cut(s) 315
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 1 cut(s) 624
Eco147I AGGCCT 1 cut(s) 2351
Eco24I GRGCYC 1 cut(s) 1357
Eco31I GGTCTC 1 cut(s) 317
Eco32I GATATC 1 cut(s) 2085
Eco47I GGWCC 4 cut(s) 841, 863, 891, 1697
Eco57I CTGAAG 3 cut(s) 743, 1283, 2082
Eco88I CYCGRG 1 cut(s) 2327
EcoNI CCTNNNNNAGG 1 cut(s) 1664
EcoRI GAATTC 2 cut(s) 167, 884
EcoRII CCWGG 3 cut(s) 1003, 1153, 2260
EcoRV GATATC 1 cut(s) 2085
EcoT14I CCWWGG 1 cut(s) 624
EcoT38I GRGCYC 1 cut(s) 1357
ErhI CCWWGG 1 cut(s) 624
FaeI CATG 6 cut(s) 934, 1645, 1694, 1907, 2077, 2093
FatI CATG 6 cut(s) 930, 1641, 1690, 1903, 2073, 2089
FauI CCCGC 1 cut(s) 696
FauNDI CATATG 2 cut(s) 1282, 1810
FokI GGATG 9 cut(s) 607, 920, 1034, 1147, 1311, 1490, 1499, 1574, 2173
FriOI GRGCYC 1 cut(s) 1357
FspBI CTAG 6 cut(s) 278, 849, 1127, 1316, 1886, 2307
GlaI GCGC 2 cut(s) 581, 1671
GsaI CCCAGC 1 cut(s) 1568
HaeII RGCGCY 1 cut(s) 1673
HaeIII GGCC 3 cut(s) 1214, 1510, 2351
HapII CCGG 1 cut(s) 861
HgaI GACGC 1 cut(s) 1909
HhaI GCGC 2 cut(s) 582, 1672
Hin1II CATG 6 cut(s) 934, 1645, 1694, 1907, 2077, 2093
Hin6I GCGC 2 cut(s) 580, 1670
HinP1I GCGC 2 cut(s) 580, 1670
HincII GTYRAC 1 cut(s) 1998
HindII GTYRAC 1 cut(s) 1998
HindIII AAGCTT 2 cut(s) 146, 2006
HpaI GTTAAC 1 cut(s) 1998
HpaII CCGG 1 cut(s) 861
HphI GGTGA 7 cut(s) 71, 844, 1131, 1171, 1232, 1677, 1937
Hpy166II GTNNAC 3 cut(s) 356, 412, 1998
Hpy8I GTNNAC 3 cut(s) 356, 412, 1998
HpyAV CCTTC 8 cut(s) 115, 151, 235, 876, 1053, 1092, 1389, 1455
HpyCH4III ACNGT 1 cut(s) 1210
HpyF10VI GCNNNNNNNGC 4 cut(s) 532, 1286, 1478, 1751
HpyF3I CTNAG 6 cut(s) 191, 632, 828, 1085, 2135, 2214
Hsp92II CATG 6 cut(s) 934, 1645, 1694, 1907, 2077, 2093
HspAI GCGC 2 cut(s) 580, 1670
KspAI GTTAAC 1 cut(s) 1998
Kzo9I GATC 4 cut(s) 1081, 1938, 2131, 2146
LmnI GCTCC 3 cut(s) 187, 628, 1123
Lsp1109I GCAGC 9 cut(s) 316, 535, 619, 655, 967, 1196, 1349, 1445, 1525
LweI GCATC 6 cut(s) 1012, 1276, 1430, 1468, 1596, 1861
MaeI CTAG 6 cut(s) 278, 849, 1127, 1316, 1886, 2307
MaeIII GTNAC 5 cut(s) 489, 1116, 1137, 1255, 1649
MalI GATC 4 cut(s) 1083, 1940, 2133, 2148
MboI GATC 4 cut(s) 1081, 1938, 2131, 2146
MboII GAAGA 9 cut(s) 332, 847, 1103, 1298, 1386, 1440, 1643, 2247, 2311
MfeI CAATTG 1 cut(s) 941
MflI RGATCY 1 cut(s) 1938
MhlI GDGCHC 2 cut(s) 694, 1357
MlyI GAGTC 5 cut(s) 182, 497, 1312, 1689, 2183
MmeI TCCRAC 8 cut(s) 234, 1224, 1407, 1560, 1644, 1675, 1765, 2044
MroXI GAANNNNTTC 1 cut(s) 167
MseI TTAA 9 cut(s) 75, 213, 1149, 1346, 1829, 1997, 2027, 2126, 2157
MslI CAYNNNNRTG 2 cut(s) 902, 2201
MspA1I CMGCKG 3 cut(s) 703, 980, 1340
MspI CCGG 1 cut(s) 861
MspR9I CCNGG 3 cut(s) 1005, 1155, 2262
MunI CAATTG 1 cut(s) 941
MvaI CCWGG 3 cut(s) 1005, 1155, 2262
MwoI GCNNNNNNNGC 4 cut(s) 532, 1286, 1478, 1751
NdeI CATATG 2 cut(s) 1282, 1810
NdeII GATC 4 cut(s) 1081, 1938, 2131, 2146
NlaIII CATG 6 cut(s) 934, 1645, 1694, 1907, 2077, 2093
NlaIV GGNNCC 2 cut(s) 1377, 2266
NmuCI GTSAC 2 cut(s) 489, 1137
NspI RCATGY 1 cut(s) 1694
PaeR7I CTCGAG 1 cut(s) 2327
PagI TCATGA 1 cut(s) 930
PceI AGGCCT 1 cut(s) 2351
PdmI GAANNNNTTC 1 cut(s) 167
PfeI GAWTC 8 cut(s) 26, 180, 257, 572, 656, 956, 1223, 1522
PinAI ACCGGT 1 cut(s) 860
PleI GAGTC 5 cut(s) 181, 496, 1311, 1688, 2182
PpsI GAGTC 5 cut(s) 181, 496, 1311, 1688, 2182
PshBI ATTAAT 1 cut(s) 1149
PsiI TTATAA 1 cut(s) 1847
Psp6I CCWGG 3 cut(s) 1003, 1153, 2260
PspFI CCCAGC 1 cut(s) 1564
PspGI CCWGG 3 cut(s) 1003, 1153, 2260
PspN4I GGNNCC 2 cut(s) 1377, 2266
PspPI GGNCC 5 cut(s) 841, 863, 891, 1508, 1697
PspXI VCTCGAGB 1 cut(s) 2327
PsuI RGATCY 1 cut(s) 1938
PvuII CAGCTG 1 cut(s) 1340
RsaI GTAC 1 cut(s) 967
RsaNI GTAC 1 cut(s) 966
RseI CAYNNNNRTG 2 cut(s) 902, 2201
SaqAI TTAA 9 cut(s) 75, 213, 1149, 1346, 1829, 1997, 2027, 2126, 2157
Sau3AI GATC 4 cut(s) 1081, 1938, 2131, 2146
Sau96I GGNCC 5 cut(s) 841, 863, 891, 1508, 1697
SchI GAGTC 5 cut(s) 182, 497, 1312, 1689, 2183
ScrFI CCNGG 3 cut(s) 1005, 1155, 2262
SduI GDGCHC 2 cut(s) 694, 1357
SfaNI GCATC 6 cut(s) 1012, 1276, 1430, 1468, 1596, 1861
Sfr274I CTCGAG 1 cut(s) 2327
SinI GGWCC 4 cut(s) 841, 863, 891, 1697
SlaI CTCGAG 1 cut(s) 2327
SmiMI CAYNNNNRTG 2 cut(s) 902, 2201
SmlI CTYRAG 5 cut(s) 456, 540, 800, 2171, 2327
SmoI CTYRAG 5 cut(s) 456, 540, 800, 2171, 2327
SseBI AGGCCT 1 cut(s) 2351
SsiI CCGC 7 cut(s) 5, 99, 334, 703, 978, 1249, 1688
SspI AATATT 2 cut(s) 1456, 1762
SspMI CTAG 6 cut(s) 278, 849, 1127, 1316, 1886, 2307
StuI AGGCCT 1 cut(s) 2351
StyD4I CCNGG 3 cut(s) 1003, 1153, 2260
StyI CCWWGG 1 cut(s) 624
TaaI ACNGT 1 cut(s) 1210
TaqI TCGA 6 cut(s) 29, 87, 171, 176, 350, 2328
TaqII GACCGA 1 cut(s) 341
TauI GCSGC 1 cut(s) 1252
TfiI GAWTC 8 cut(s) 26, 180, 257, 572, 656, 956, 1223, 1522
Tru1I TTAA 9 cut(s) 75, 213, 1149, 1346, 1829, 1997, 2027, 2126, 2157
Tru9I TTAA 9 cut(s) 75, 213, 1149, 1346, 1829, 1997, 2027, 2126, 2157
TscAI CASTG 3 cut(s) 1078, 1215, 1742
TseFI GTSAC 2 cut(s) 489, 1137
TseI GCWGC 9 cut(s) 304, 523, 607, 643, 980, 1184, 1337, 1433, 1538
Tsp45I GTSAC 2 cut(s) 489, 1137
TspGWI ACGGA 1 cut(s) 1490
TspRI CASTG 3 cut(s) 1078, 1215, 1742
VpaK11BI GGWCC 4 cut(s) 841, 863, 891, 1697
VspI ATTAAT 1 cut(s) 1149
XagI CCTNNNNNAGG 1 cut(s) 1664
XapI RAATTY 6 cut(s) 167, 884, 1009, 1048, 1571, 1928
XbaI TCTAGA 2 cut(s) 848, 1885
XceI RCATGY 1 cut(s) 1694
XcmI CCANNNNNNNNNTGG 2 cut(s) 901, 1207
XhoI CTCGAG 1 cut(s) 2327
XmnI GAANNNNTTC 1 cut(s) 167
XspI CTAG 6 cut(s) 278, 849, 1127, 1316, 1886, 2307
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.