RchiOBHm_Chr3g0453061

Belongs to the Frigida family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000126
Physical Location & Seq
Forward (+)
3593462 .. 3594868
1407 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ42017

Sequence Viewer

Length: 1407 bp
ATGGAGGAGATAGCATCGGAGTTGAAGCAGAGAAATGTGAGAGAAGCGTGGAAGGAGCTGGACGACCACTTTGACTCGACCCGGAGACGGCTCCGGACCCGGTTCCAGGAGCTCCAGGCCCGCGAGGAGGAAATCGGAGTCCGTGAGAAGCTGTTGGAGGTGAAAGAGCTGAGATTAGAAGCTCAGGCCAAGGGATTGAATGAAGTTGAGAAGCGGGCCGAAGAAGGTAAGAGTCAGTTGGAGTCTCTTAGGGTTTTGATTGAAAAACATGAAGCAGAGCTTGGTGTTAAATTAAAGAGGCTCTCGGAGGTTGGGGAATTAGTTAGGGAAAAGGAGAGGGAGTATGATTTGATTCAGAATCGTGTGAAAGAGAGGGGTAAGAGACTGAACAAGTATAATCGTGCGATTGAGTTGAAAAAGGGGCAACTTGGTTCGATTCTGAAATCGATGATGGAATGCCAGAGCAGAATCGATTCGAGGGAGAAGATAATGAGGGAAATGGAGTTGAAAGGGAGGGACTTTTGTTTGCTGAAGAAATCGATGGAGGATTGGTTATGTAAAGTTGAATTGAGAAACAGGGAGCTTGATGGATGGGTTGAGGTTCTTGAGGTGAAGGAGAAGGATGTTGAGTCCAAAGTTGAGGAACTCCATTTGATTGTTGAGAGGGTCAGTGAATGCCTTGATGAGGTTCAGGTGAAAGAAGAGCATTTTGTTTCGTTAGAAAAACCGATACAGGAGCAGGAAATGCATTTGTGTTCACTCCAAAAGTTGGTGCAACAGCGTGACAAGGAGTTGGATTCACTGTCCCATGAACTTCAAAGGAAAGAGAGGCATCTTGAAGAGGTTGAATTGAAGATGGCGAAATTAGGACATGCGATTCCTTCATACGTAAGTGATGATCATTCCAGCATTCATTGGGATGGTAGAGGCTTGCAAATGTTCATGAATGAGCAGTTGAAGAGAATATATTCAATGGGTAGTGAAATGTCAGCAATTCTTAAAGCCTCATCTGACCCAGCAAAATTGGTTTTGGATGCAATGCAAGGATTTTACCCTTCAAGTTCAACTCTGGACAACAAGGAGACTCATTTTGATTTGACAGTTATTAGAAGGAGTTGTATTCTTTTGTTAGAGGATTTGAAGAGAATGTCACCACAAATTAATGTTCGGGTGAGAAACGAAGCAATGAAGTTGGCGGCTGACTGGAAGGCTAAGATAGTATCTAGTGAGAATACACAGGAGATTTTGGGGTTTCTGCGGCTTGTTAATACGTATGGATTGAGTTCGATGTATGATGCGAAAGATCTTCAAAGCCTTCTTGCTGTTGTTCATAAGCCCGAACAAGCATCTCAATCAAGTAGGGCCCTTGGTATCAAAGATAAAGCACCTGGTGAGGCCTTTTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida

Protein Analysis

468

Amino Acids

54.53

Weight (kDa)

6.16

Isoelectric Point (pI)

57.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 307 - 463 3.8e-32 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 769
AccII CGCG 1 cut(s) 123
AccIII TCCGGA 1 cut(s) 93
AciI CCGC 4 cut(s) 121, 214, 1196, 1258
AcuI CTGAAG 1 cut(s) 551
AdeI CACNNNGTG 1 cut(s) 1391
AfiI CCNNNNNNNGG 5 cut(s) 87, 106, 127, 685, 769
AjnI CCWGG 3 cut(s) 105, 114, 1387
AjuI GAANNNNNNNTTGG 2 cut(s) 264, 296
AluBI AGCT 7 cut(s) 58, 112, 151, 169, 182, 280, 583
AluI AGCT 7 cut(s) 58, 112, 151, 169, 182, 280, 583
Alw21I GWGCWC 1 cut(s) 114
Alw26I GTCTC 4 cut(s) 79, 249, 376, 1076
Aor13HI TCCGGA 1 cut(s) 93
AoxI GGCC 5 cut(s) 117, 186, 216, 1362, 1395
ApaI GGGCCC 1 cut(s) 1366
ArsI GACNNNNNNTTYG 2 cut(s) 53, 85
AseI ATTAAT 1 cut(s) 1161
Asp700I GAANNNNTTC 2 cut(s) 472, 967
AspS9I GGNCC 5 cut(s) 96, 118, 216, 1362, 1363
AsuC2I CCSGG 2 cut(s) 82, 100
AsuHPI GGTGA 6 cut(s) 172, 622, 706, 1143, 1183, 1403
AvaII GGWCC 1 cut(s) 96
BaeGI GKGCMC 1 cut(s) 1366
BanII GRGCYC 2 cut(s) 114, 1366
Bbv12I GWGCWC 1 cut(s) 114
BccI CCATC 6 cut(s) 445, 535, 581, 585, 850, 914
BceAI ACGGC 1 cut(s) 104
BciT130I CCWGG 3 cut(s) 107, 116, 1389
BclI TGATCA 1 cut(s) 898
BcnI CCSGG 2 cut(s) 82, 100
BcoDI GTCTC 4 cut(s) 79, 249, 376, 1076
BfaI CTAG 1 cut(s) 1224
BglII AGATCT 1 cut(s) 1303
BisI GCNGC 2 cut(s) 1197, 1259
BlsI GCNGC 2 cut(s) 1198, 1260
Bme1390I CCNGG 5 cut(s) 82, 100, 107, 116, 1389
Bme18I GGWCC 1 cut(s) 96
BmgT120I GGNCC 5 cut(s) 96, 118, 216, 1362, 1363
BmiI GGNNCC 4 cut(s) 92, 98, 104, 1364
BmrFI CCNGG 5 cut(s) 82, 100, 107, 116, 1389
BmsI GCATC 5 cut(s) 23, 841, 1024, 1285, 1355
BpmI CTGGAG 1 cut(s) 98
Bpu10I CCTNAGC 1 cut(s) 183
BpuEI CTTGAG 1 cut(s) 626
BpuMI CCSGG 2 cut(s) 82, 100
Bsa29I ATCGAT 3 cut(s) 446, 471, 539
BsaAI YACGTR 2 cut(s) 889, 1272
BsaJI CCNNGG 2 cut(s) 189, 1366
BsaWI WCCGGW 1 cut(s) 93
BsaXI ACNNNNNCTCC 4 cut(s) 326, 356, 536, 566
Bsc4I CCNNNNNNNGG 5 cut(s) 87, 106, 127, 685, 769
Bse1I ACTGG 1 cut(s) 1208
Bse3DI GCAATG 2 cut(s) 1044, 1191
BseAI TCCGGA 1 cut(s) 93
BseBI CCWGG 3 cut(s) 107, 116, 1389
BseCI ATCGAT 3 cut(s) 446, 471, 539
BseDI CCNNGG 2 cut(s) 189, 1366
BseGI GGATG 4 cut(s) 596, 628, 925, 1039
BseLI CCNNNNNNNGG 5 cut(s) 87, 106, 127, 685, 769
BseMI GCAATG 2 cut(s) 1044, 1191
BseMII CTCAG 2 cut(s) 161, 197
BseNI ACTGG 1 cut(s) 1208
BseRI GAGGAG 2 cut(s) 20, 140
BseSI GKGCMC 1 cut(s) 1366
BseYI CCCAGC 1 cut(s) 1015
Bsh1236I CGCG 1 cut(s) 123
BshFI GGCC 5 cut(s) 119, 188, 218, 1364, 1397
BshVI ATCGAT 3 cut(s) 446, 471, 539
BsiHKAI GWGCWC 1 cut(s) 114
BsiSI CCGG 3 cut(s) 82, 94, 100
BslFI GGGAC 2 cut(s) 530, 790
BslI CCNNNNNNNGG 5 cut(s) 87, 106, 127, 685, 769
BsmAI GTCTC 4 cut(s) 79, 249, 376, 1076
BsmBI CGTCTC 1 cut(s) 79
BsmFI GGGAC 2 cut(s) 530, 790
BsmI GAATGC 3 cut(s) 461, 680, 909
BsnI GGCC 5 cut(s) 119, 188, 218, 1364, 1397
Bsp120I GGGCCC 1 cut(s) 1362
Bsp1286I GDGCHC 2 cut(s) 114, 1366
Bsp13I TCCGGA 1 cut(s) 93
Bsp143I GATC 2 cut(s) 898, 1303
BspACI CCGC 4 cut(s) 121, 214, 1196, 1258
BspANI GGCC 5 cut(s) 119, 188, 218, 1364, 1397
BspCNI CTCAG 2 cut(s) 162, 196
BspDI ATCGAT 3 cut(s) 446, 471, 539
BspEI TCCGGA 1 cut(s) 93
BspFNI CGCG 1 cut(s) 123
BspHI TCATGA 1 cut(s) 942
BspLI GGNNCC 4 cut(s) 92, 98, 104, 1364
BspQI GCTCTTC 1 cut(s) 696
BsrDI GCAATG 2 cut(s) 1044, 1191
BsrI ACTGG 1 cut(s) 1208
BssECI CCNNGG 2 cut(s) 189, 1366
BssMI GATC 2 cut(s) 898, 1303
BssT1I CCWWGG 2 cut(s) 189, 1366
Bst2UI CCWGG 3 cut(s) 107, 116, 1389
Bst4CI ACNGT 2 cut(s) 804, 1102
Bst6I CTCTTC 4 cut(s) 696, 834, 953, 1136
BstAPI GCANNNNNTGC 1 cut(s) 745
BstBAI YACGTR 2 cut(s) 889, 1272
BstC8I GCNNGC 3 cut(s) 121, 216, 932
BstDEI CTNAG 4 cut(s) 170, 183, 248, 1212
BstENI CCTNNNNNAGG 1 cut(s) 683
BstF5I GGATG 4 cut(s) 596, 628, 925, 1039
BstFNI CGCG 1 cut(s) 123
BstKTI GATC 2 cut(s) 901, 1306
BstMAI GTCTC 4 cut(s) 79, 249, 376, 1076
BstMBI GATC 2 cut(s) 898, 1303
BstMWI GCNNNNNNNGC 1 cut(s) 745
BstNI CCWGG 3 cut(s) 107, 116, 1389
BstNSI RCATGY 1 cut(s) 875
BstSCI CCNGG 5 cut(s) 80, 98, 105, 114, 1387
BstSLI GKGCMC 1 cut(s) 1366
BstSNI TACGTA 2 cut(s) 889, 1272
BstUI CGCG 1 cut(s) 123
BstX2I RGATCY 1 cut(s) 1303
BstYI RGATCY 1 cut(s) 1303
Bsu15I ATCGAT 3 cut(s) 446, 471, 539
BsuRI GGCC 5 cut(s) 119, 188, 218, 1364, 1397
BsuTUI ATCGAT 3 cut(s) 446, 471, 539
BtsCI GGATG 4 cut(s) 596, 628, 925, 1039
BtsIMutI CAGTG 2 cut(s) 676, 800
Cac8I GCNNGC 3 cut(s) 121, 216, 932
CciI TCATGA 1 cut(s) 942
Cfr13I GGNCC 5 cut(s) 96, 118, 216, 1362, 1363
ClaI ATCGAT 3 cut(s) 446, 471, 539
CsiI ACCWGGT 1 cut(s) 1387
CviAII CATG 4 cut(s) 269, 809, 872, 943
DdeI CTNAG 4 cut(s) 170, 183, 248, 1212
DpnI GATC 2 cut(s) 900, 1305
DpnII GATC 2 cut(s) 898, 1303
DraIII CACNNNGTG 1 cut(s) 1391
Eam1104I CTCTTC 4 cut(s) 696, 834, 953, 1136
EarI CTCTTC 4 cut(s) 696, 834, 953, 1136
Ecl136II GAGCTC 1 cut(s) 112
Eco105I TACGTA 2 cut(s) 889, 1272
Eco130I CCWWGG 2 cut(s) 189, 1366
Eco147I AGGCCT 1 cut(s) 1397
Eco24I GRGCYC 2 cut(s) 114, 1366
Eco47I GGWCC 1 cut(s) 96
Eco53kI GAGCTC 1 cut(s) 112
Eco57I CTGAAG 1 cut(s) 551
EcoICRI GAGCTC 1 cut(s) 112
EcoNI CCTNNNNNAGG 1 cut(s) 683
EcoO109I RGGNCCY 2 cut(s) 1362, 1363
EcoRII CCWGG 3 cut(s) 105, 114, 1387
EcoT14I CCWWGG 2 cut(s) 189, 1366
EcoT22I ATGCAT 1 cut(s) 750
EcoT38I GRGCYC 2 cut(s) 114, 1366
ErhI CCWWGG 2 cut(s) 189, 1366
Esp3I CGTCTC 1 cut(s) 79
FaeI CATG 4 cut(s) 272, 812, 875, 946
FalI AAGNNNNNCTT 2 cut(s) 264, 296
FaqI GGGAC 2 cut(s) 530, 790
FatI CATG 4 cut(s) 268, 808, 871, 942
FauI CCCGC 2 cut(s) 128, 207
FbaI TGATCA 1 cut(s) 898
Fnu4HI GCNGC 2 cut(s) 1197, 1259
FokI GGATG 4 cut(s) 603, 635, 932, 1046
FriOI GRGCYC 2 cut(s) 114, 1366
Fsp4HI GCNGC 2 cut(s) 1197, 1259
FspBI CTAG 1 cut(s) 1224
GluI GCNGC 2 cut(s) 1197, 1259
GsaI CCCAGC 1 cut(s) 1019
GsuI CTGGAG 1 cut(s) 98
HaeIII GGCC 5 cut(s) 119, 188, 218, 1364, 1397
HapII CCGG 3 cut(s) 82, 94, 100
Hin1II CATG 4 cut(s) 272, 812, 875, 946
HpaII CCGG 3 cut(s) 82, 94, 100
HphI GGTGA 6 cut(s) 172, 622, 706, 1143, 1183, 1403
Hpy166II GTNNAC 1 cut(s) 758
Hpy188I TCNGA 6 cut(s) 19, 137, 307, 357, 441, 1012
Hpy188III TCNNGA 5 cut(s) 94, 605, 836, 943, 1070
Hpy8I GTNNAC 1 cut(s) 758
HpyAV CCTTC 9 cut(s) 46, 218, 607, 613, 891, 1065, 1104, 1201, 1325
HpyCH4III ACNGT 2 cut(s) 804, 1102
HpyCH4IV ACGT 2 cut(s) 888, 1271
HpyCH4V TGCA 5 cut(s) 748, 775, 934, 1037, 1042
HpyF10VI GCNNNNNNNGC 1 cut(s) 745
HpyF3I CTNAG 4 cut(s) 170, 183, 248, 1212
HpySE526I ACGT 2 cut(s) 888, 1271
Hsp92II CATG 4 cut(s) 272, 812, 875, 946
Kpn2I TCCGGA 1 cut(s) 93
Ksp22I TGATCA 1 cut(s) 898
Kzo9I GATC 2 cut(s) 898, 1303
LguI GCTCTTC 1 cut(s) 696
LmnI GCTCC 6 cut(s) 55, 96, 109, 117, 580, 736
LweI GCATC 5 cut(s) 23, 841, 1024, 1285, 1355
MabI ACCWGGT 1 cut(s) 1387
MaeI CTAG 1 cut(s) 1224
MaeII ACGT 2 cut(s) 888, 1271
MaeIII GTNAC 2 cut(s) 782, 1149
MalI GATC 2 cut(s) 900, 1305
MboI GATC 2 cut(s) 898, 1303
MboII GAAGA 9 cut(s) 233, 496, 544, 713, 851, 865, 970, 1153, 1298
MflI RGATCY 1 cut(s) 1303
MhlI GDGCHC 2 cut(s) 114, 1366
MluCI AATT 8 cut(s) 290, 317, 566, 848, 863, 993, 1022, 1158
MlyI GAGTC 6 cut(s) 68, 147, 241, 251, 638, 1078
MmeI TCCRAC 3 cut(s) 135, 219, 774
Mph1103I ATGCAT 1 cut(s) 750
MroI TCCGGA 1 cut(s) 93
MroXI GAANNNNTTC 2 cut(s) 472, 967
MseI TTAA 5 cut(s) 288, 293, 999, 1161, 1266
MslI CAYNNNNRTG 1 cut(s) 918
MspI CCGG 3 cut(s) 82, 94, 100
MspR9I CCNGG 5 cut(s) 82, 100, 107, 116, 1389
Mva1269I GAATGC 3 cut(s) 461, 680, 909
MvaI CCWGG 3 cut(s) 107, 116, 1389
MvnI CGCG 1 cut(s) 123
MwoI GCNNNNNNNGC 1 cut(s) 745
NciI CCSGG 2 cut(s) 82, 100
NdeII GATC 2 cut(s) 898, 1303
NlaIII CATG 4 cut(s) 272, 812, 875, 946
NlaIV GGNNCC 4 cut(s) 92, 98, 104, 1364
NmuCI GTSAC 2 cut(s) 782, 1149
NsiI ATGCAT 1 cut(s) 750
NspI RCATGY 1 cut(s) 875
PagI TCATGA 1 cut(s) 942
PceI AGGCCT 1 cut(s) 1397
PciSI GCTCTTC 1 cut(s) 696
PctI GAATGC 3 cut(s) 461, 680, 909
PdmI GAANNNNTTC 2 cut(s) 472, 967
PfeI GAWTC 7 cut(s) 352, 358, 436, 468, 473, 797, 877
PflMI CCANNNNNTGG 1 cut(s) 769
PfoI TCCNGGA 1 cut(s) 105
PkrI GCNGC 2 cut(s) 1198, 1260
PleI GAGTC 6 cut(s) 68, 146, 240, 250, 637, 1078
PpsI GAGTC 6 cut(s) 68, 146, 240, 250, 637, 1078
Ppu21I YACGTR 2 cut(s) 889, 1272
PshBI ATTAAT 1 cut(s) 1161
Psp124BI GAGCTC 1 cut(s) 114
Psp6I CCWGG 3 cut(s) 105, 114, 1387
PspFI CCCAGC 1 cut(s) 1015
PspGI CCWGG 3 cut(s) 105, 114, 1387
PspN4I GGNNCC 4 cut(s) 92, 98, 104, 1364
PspOMI GGGCCC 1 cut(s) 1362
PspPI GGNCC 5 cut(s) 96, 118, 216, 1362, 1363
PsuI RGATCY 1 cut(s) 1303
RseI CAYNNNNRTG 1 cut(s) 918
SacI GAGCTC 1 cut(s) 114
SapI GCTCTTC 1 cut(s) 696
SaqAI TTAA 5 cut(s) 288, 293, 999, 1161, 1266
SatI GCNGC 2 cut(s) 1197, 1259
Sau3AI GATC 2 cut(s) 898, 1303
Sau96I GGNCC 5 cut(s) 96, 118, 216, 1362, 1363
SchI GAGTC 6 cut(s) 68, 147, 241, 251, 638, 1078
ScrFI CCNGG 5 cut(s) 82, 100, 107, 116, 1389
SduI GDGCHC 2 cut(s) 114, 1366
SexAI ACCWGGT 1 cut(s) 1387
SfaNI GCATC 5 cut(s) 23, 841, 1024, 1285, 1355
SinI GGWCC 1 cut(s) 96
SmiMI CAYNNNNRTG 1 cut(s) 918
SmlI CTYRAG 1 cut(s) 605
SmoI CTYRAG 1 cut(s) 605
SnaBI TACGTA 2 cut(s) 889, 1272
Sse9I AATT 8 cut(s) 290, 317, 566, 848, 863, 993, 1022, 1158
SseBI AGGCCT 1 cut(s) 1397
SsiI CCGC 4 cut(s) 121, 214, 1196, 1258
SspMI CTAG 1 cut(s) 1224
SstI GAGCTC 1 cut(s) 114
StuI AGGCCT 1 cut(s) 1397
StyD4I CCNGG 5 cut(s) 80, 98, 105, 114, 1387
StyI CCWWGG 2 cut(s) 189, 1366
TaaI ACNGT 2 cut(s) 804, 1102
TaiI ACGT 2 cut(s) 891, 1274
TaqI TCGA 7 cut(s) 77, 434, 446, 471, 476, 539, 1286
TasI AATT 8 cut(s) 290, 317, 566, 848, 863, 993, 1022, 1158
TauI GCSGC 2 cut(s) 1199, 1261
TfiI GAWTC 7 cut(s) 352, 358, 436, 468, 473, 797, 877
Tru1I TTAA 5 cut(s) 288, 293, 999, 1161, 1266
Tru9I TTAA 5 cut(s) 288, 293, 999, 1161, 1266
TscAI CASTG 2 cut(s) 676, 807
TseFI GTSAC 2 cut(s) 782, 1149
Tsp45I GTSAC 2 cut(s) 782, 1149
TspDTI ATGAA 9 cut(s) 216, 285, 825, 873, 902, 931, 959, 1202, 1319
TspGWI ACGGA 1 cut(s) 131
TspRI CASTG 2 cut(s) 676, 807
Van91I CCANNNNNTGG 1 cut(s) 769
VpaK11BI GGWCC 1 cut(s) 96
VspI ATTAAT 1 cut(s) 1161
XagI CCTNNNNNAGG 1 cut(s) 683
XceI RCATGY 1 cut(s) 875
XmnI GAANNNNTTC 2 cut(s) 472, 967
XspI CTAG 1 cut(s) 1224
Zsp2I ATGCAT 1 cut(s) 750
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.