Rorug07G0303600

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000126
Physical Location & Seq
Reverse (-)
30227239 .. 30233178
5940 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0303600.1

Sequence Viewer

Length: 2190 bp
ATGGATAAAAGTTCTGTCCATAGGCCCCTTCTTTCGAGCCGAGGTTCTGGGCATGCTTATGTCCGGAAGACGCCTCTTTTTGTGAACTTGGCAAAATGGATTCTGAAGATTGCAATGGGGCTGCTTTTCACTTTATGGGTTGCTCTAATATTTGTGTTCCCAGCAGAATTTGGGACTGAACTATACGAAACATGGGTTGCAGCGACCAGTGGAACTGTTTTTGGGATTACAGGAAGCACATTCCTGCTATTCAGCGGTCCCATTATCATCATTGCACTCCTTTCTGTAGTGTTTCTTATTATCTCCGGGGAAGAGGAGCTCCATGAGAAGAAGACTTCAAGTTATCCAAGTTTCCGCTTGTGGACATTTCCAGTTCTTGTGGATGGACCATTTGGTGTGGTTTCTGCTACTGAGCTTATTGGGATATTGCTTTTCATTGCGTTTGTTGTCTGGGCTGTCTGTTCTTATACTGTGCGTATCCTCAACTCCCTGTCTGCTGATAGCTTGACTTTCAAAGAGAATAGTTTGTTGTTCATGGAAATTTTGGGACTTCGTTTCGGCTTAATTGGCTTGTTTTGCTTCTCATTTTTGTTCCTGCCGATCTCAAGGGGATCAGTTCTTCTTCGCCTCATAAATATCCCTTTTGAGCATGCTACGAAATATCATGTATGGCTGGGACATCTAACAATGCTGCTCTTCACTGTCCATGGCCTATTATACGTAGTGGTATGGACGATTGAGGGTAATCTCCTTCAGGAAATATTGTCATGGACTGATATTGGTATTGCCATTCTTCCGGGAGTAATCAGCCTCCTTGCTGGTCTCTTGATGTGGGTTACATCAATGCCTCCAGTGAGAAAGCTGAATTTTGAGTTATTCTTCTACACTCATCAGTTATATGTCATTTTTGTCGTCTTTTTGGCTTTGCACGTCGGTGATTTCCTTTTTGCATTTGCTGCTGGAGGCATATTTATTTTTCTTCTGGATCGTTTTCTAAGATTCTGTCAATCACGAAGGGTTGTTGATATAATTTCAGCAAAGTGCCTTCCATGTGGAACTGTAGAACTGGTTGTCGCCAAACCTGAAAATCTGCGGTACAATGCCCTCAGTTTTGTTTTTCTTCAAGTTCGGGAGCTATCATGGCTGCAGTGGCATCCTTTCAGTGTGTCATCCAGTCCTATGGATGGTAAATATCATATATCTGTGCTCATAAAGGTTCTTGGGAAATGGACAGAAAAGCTAAGAGGAAATATCTTGAAGAGCTCTGAGGATGTGTCGTGCAGTCTTCCTACTAAGTTAACAGCTTCTGTTGAAGGGCCTTATGGGCATGAGATACCATACCACATGACGTATGAAAATCTTATTTTAGTAGCTGGTGGCATTGGGATTTCCCCTTTCCTGGCCATCTTGAGTGACATTCTCCATTCTGTTCATCAAGGAAAGCCCTGTCTACCGAGAAATATCTTGATCGTATGGGCGGTCAAAAAATCAAATGAGCTTCCTCTTCTTTCAACCATTGACATGGAATCAACTTGTCCATCTTTCTCTACTAAACTAAATCTTCAGACTCTTATTTATGTCACTCGGGAATCTGAACCTCCATTGGAAGAGGGTAAAGTTGAAAGCACTGTCCAGTCTTCTCTCTGTCCCATGTCCAAAGGGTGTGGTATGTCTGTTTTGGTTGGTACTGGACATAATATATGGTCTGGCCTATACGTTATCTCATCTACACTGGGCTTTGTTATCCTAATTGGTTTGTTGGATATCCTCTACATAAACCCATTTGATATATCCACATGGTGGTATAAAGGGCTTCTTCTCGTAGCCTGTATGGTTGCAAGTGTTTTTATCTTTGGGGGTCTCGTGGTTGGTTTATGGCATCTCTGGGACAGAAGAATGTCAGCAAAGGAGCAAAGCAAGGAGGCAGAGCATAAAAAAACTGTAGCTCACAATGATTTAGACGAGAGAAGTCCTGCAAACTTTACCAGCATTATTTATGGTGCAAGACCAGACTTCAATGAAATTTTTGGAACCGTATCAAGGGAATGGGGCCCTGTTGATGTTGGTGTATTTGTTTGTGGTCCTCCATCTCTTCAATCAAGTGTTGCTAAAGAAATCAGGTCACACACTATGAGGAGACAATCCATTGATCCTGTCTTCCATTTCAACAGCCATAGCTTTGACCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida TEX13

Protein Analysis

729

Amino Acids

81.44

Weight (kDa)

7.08

Isoelectric Point (pI)

44.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ferric_reduct PF01794 186 - 307 1.3e-21 Ferric reductase like transmembrane component
FAD_binding_8 PF08022 342 - 443 4.8e-20 FAD-binding domain
NAD_binding_6 PF08030 451 - 534 2.2e-09 Ferric reductase NAD binding domain
NAD_binding_6 PF08030 636 - 704 4.2e-07 Ferric reductase NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1800
AccI GTMKAC 1 cut(s) 1450
AccIII TCCGGA 1 cut(s) 63
AciI CCGC 4 cut(s) 255, 355, 1093, 1478
AclWI GGATC 3 cut(s) 619, 993, 2144
AcoI YGGCCR 1 cut(s) 1401
AcsI RAATTY 4 cut(s) 167, 540, 865, 2022
AcuI CTGAAG 3 cut(s) 125, 737, 1547
AcyI GRCGYC 1 cut(s) 71
AdeI CACNNNGTG 1 cut(s) 1800
AfaI GTAC 2 cut(s) 1097, 1687
AfiI CCNNNNNNNGG 4 cut(s) 1184, 1399, 1800, 2040
AjiI CACGTC 1 cut(s) 931
AjnI CCWGG 1 cut(s) 1398
AleI CACNNNNGTG 1 cut(s) 933
Alw21I GWGCWC 3 cut(s) 321, 1209, 1265
Alw26I GTCTC 3 cut(s) 827, 1865, 2131
AlwI GGATC 3 cut(s) 619, 993, 2144
AlwNI CAGNNNCTG 1 cut(s) 1307
Ama87I CYCGRG 1 cut(s) 1584
Aor13HI TCCGGA 1 cut(s) 63
AoxI GGCC 6 cut(s) 23, 709, 1316, 1401, 1708, 2050
ApaI GGGCCC 1 cut(s) 2054
ApeKI GCWGC 5 cut(s) 121, 200, 691, 956, 1144
ApoI RAATTY 4 cut(s) 167, 540, 865, 2022
AspS9I GGNCC 7 cut(s) 24, 257, 386, 1316, 2050, 2051, 2081
AsuC2I CCSGG 2 cut(s) 307, 798
AsuHPI GGTGA 1 cut(s) 947
AvaI CYCGRG 1 cut(s) 1584
AvaII GGWCC 3 cut(s) 257, 386, 2081
BaeGI GKGCMC 1 cut(s) 2054
BalI TGGCCA 1 cut(s) 1403
BanII GRGCYC 3 cut(s) 321, 1265, 2054
BauI CACGAG 1 cut(s) 1862
BbsI GAAGAC 5 cut(s) 74, 338, 1277, 1629, 2149
Bbv12I GWGCWC 3 cut(s) 321, 1209, 1265
BbvI GCAGC 5 cut(s) 108, 212, 678, 943, 1131
BccI CCATC 5 cut(s) 377, 1178, 1412, 1546, 2095
BciT130I CCWGG 1 cut(s) 1400
BciVI GTATCC 1 cut(s) 488
BcnI CCSGG 2 cut(s) 307, 798
BcoDI GTCTC 3 cut(s) 827, 1865, 2131
BfmI CTRYAG 5 cut(s) 285, 1059, 1145, 1941, 2186
BfuI GTATCC 1 cut(s) 488
BglI GCCNNNNNGGC 1 cut(s) 1324
BisI GCNGC 5 cut(s) 122, 201, 692, 957, 1145
BlsI GCNGC 5 cut(s) 123, 202, 693, 958, 1146
Bme1390I CCNGG 3 cut(s) 307, 798, 1400
Bme18I GGWCC 3 cut(s) 257, 386, 2081
BmeT110I CYCGRG 1 cut(s) 1584
BmgBI CACGTC 1 cut(s) 931
BmgT120I GGNCC 7 cut(s) 24, 257, 386, 1316, 2050, 2051, 2081
BmiI GGNNCC 5 cut(s) 26, 259, 2032, 2051, 2052
BmrFI CCNGG 3 cut(s) 307, 798, 1400
BmrI ACTGGG 1 cut(s) 1742
BmsI GCATC 2 cut(s) 1162, 1888
BmuI ACTGGG 1 cut(s) 1742
BpiI GAAGAC 5 cut(s) 74, 338, 1277, 1629, 2149
BpmI CTGGAG 2 cut(s) 834, 981
BpuEI CTTGAG 2 cut(s) 589, 1429
BpuMI CCSGG 2 cut(s) 307, 798
BsaAI YACGTR 1 cut(s) 721
BsaHI GRCGYC 1 cut(s) 71
BsaI GGTCTC 2 cut(s) 827, 1865
BsaJI CCNNGG 3 cut(s) 40, 306, 706
BsaWI WCCGGW 1 cut(s) 63
Bsc4I CCNNNNNNNGG 4 cut(s) 1184, 1399, 1800, 2040
Bse1I ACTGG 8 cut(s) 207, 371, 851, 1071, 1173, 1633, 1693, 1737
Bse3DI GCAATG 3 cut(s) 120, 270, 435
BseAI TCCGGA 1 cut(s) 63
BseBI CCWGG 1 cut(s) 1400
BseDI CCNNGG 3 cut(s) 40, 306, 706
BseGI GGATG 5 cut(s) 388, 1153, 1169, 1189, 1276
BseLI CCNNNNNNNGG 4 cut(s) 1184, 1399, 1800, 2040
BseMI GCAATG 3 cut(s) 120, 270, 435
BseMII CTCAG 3 cut(s) 402, 1120, 1257
BseNI ACTGG 8 cut(s) 207, 371, 851, 1071, 1173, 1633, 1693, 1737
BseRI GAGGAG 2 cut(s) 329, 2149
BseSI GKGCMC 1 cut(s) 2054
BseXI GCAGC 5 cut(s) 108, 212, 678, 943, 1131
BseYI CCCAGC 2 cut(s) 160, 673
BsgI GTGCAG 1 cut(s) 1300
BshFI GGCC 6 cut(s) 25, 711, 1318, 1403, 1710, 2052
BsiHKAI GWGCWC 3 cut(s) 321, 1209, 1265
BsiHKCI CYCGRG 1 cut(s) 1584
BsiSI CCGG 3 cut(s) 64, 306, 797
BslFI GGGAC 6 cut(s) 187, 243, 561, 690, 1632, 1901
BslI CCNNNNNNNGG 4 cut(s) 1184, 1399, 1800, 2040
BsmAI GTCTC 3 cut(s) 827, 1865, 2131
BsmFI GGGAC 6 cut(s) 187, 243, 561, 690, 1632, 1901
BsnI GGCC 6 cut(s) 25, 711, 1318, 1403, 1710, 2052
Bso31I GGTCTC 2 cut(s) 827, 1865
BsoBI CYCGRG 1 cut(s) 1584
Bsp120I GGGCCC 1 cut(s) 2050
Bsp1286I GDGCHC 4 cut(s) 321, 1209, 1265, 2054
Bsp13I TCCGGA 1 cut(s) 63
Bsp143I GATC 5 cut(s) 600, 611, 985, 1467, 2149
Bsp19I CCATGG 1 cut(s) 706
BspACI CCGC 4 cut(s) 255, 355, 1093, 1478
BspANI GGCC 6 cut(s) 25, 711, 1318, 1403, 1710, 2052
BspCNI CTCAG 3 cut(s) 403, 1119, 1258
BspEI TCCGGA 1 cut(s) 63
BspLI GGNNCC 5 cut(s) 26, 259, 2032, 2051, 2052
BspMAI CTGCAG 1 cut(s) 1149
BspPI GGATC 3 cut(s) 619, 993, 2144
BspQI GCTCTTC 2 cut(s) 701, 1253
BspTNI GGTCTC 2 cut(s) 827, 1865
BsrDI GCAATG 3 cut(s) 120, 270, 435
BsrI ACTGG 8 cut(s) 207, 371, 851, 1071, 1173, 1633, 1693, 1737
BssECI CCNNGG 3 cut(s) 40, 306, 706
BssMI GATC 5 cut(s) 600, 611, 985, 1467, 2149
BssNI GRCGYC 1 cut(s) 71
BssSI CACGAG 1 cut(s) 1862
BssT1I CCWWGG 1 cut(s) 706
Bst2BI CACGAG 1 cut(s) 1862
Bst2UI CCWGG 1 cut(s) 1400
Bst4CI ACNGT 7 cut(s) 217, 472, 703, 1060, 1630, 1942, 2035
Bst6I CTCTTC 6 cut(s) 306, 701, 1253, 1509, 1602, 2097
BstACI GRCGYC 1 cut(s) 71
BstAPI GCANNNNNTGC 1 cut(s) 956
BstBAI YACGTR 1 cut(s) 721
BstC8I GCNNGC 2 cut(s) 54, 651
BstDEI CTNAG 6 cut(s) 411, 995, 1106, 1241, 1266, 1293
BstDSI CCRYGG 1 cut(s) 706
BstF5I GGATG 5 cut(s) 388, 1153, 1169, 1189, 1276
BstKTI GATC 5 cut(s) 603, 614, 988, 1470, 2152
BstMAI GTCTC 3 cut(s) 827, 1865, 2131
BstMBI GATC 5 cut(s) 600, 611, 985, 1467, 2149
BstMWI GCNNNNNNNGC 6 cut(s) 567, 576, 956, 1141, 1150, 1324
BstNI CCWGG 1 cut(s) 1400
BstNSI RCATGY 2 cut(s) 56, 653
BstSCI CCNGG 3 cut(s) 305, 796, 1398
BstSFI CTRYAG 5 cut(s) 285, 1059, 1145, 1941, 2186
BstSLI GKGCMC 1 cut(s) 2054
BstSNI TACGTA 1 cut(s) 721
BstV1I GCAGC 5 cut(s) 108, 212, 678, 943, 1131
BstV2I GAAGAC 5 cut(s) 74, 338, 1277, 1629, 2149
BstXI CCANNNNNNTGG 2 cut(s) 1180, 1522
BsuI GTATCC 1 cut(s) 488
BsuRI GGCC 6 cut(s) 25, 711, 1318, 1403, 1710, 2052
BtgI CCRYGG 1 cut(s) 706
BtrI CACGTC 1 cut(s) 931
BtsCI GGATG 5 cut(s) 388, 1153, 1169, 1189, 1276
BtsI GCAGTG 1 cut(s) 1154
BtsIMutI CAGTG 7 cut(s) 214, 699, 858, 1154, 1168, 1626, 1730
Cac8I GCNNGC 2 cut(s) 54, 651
CaiI CAGNNNCTG 1 cut(s) 1307
Cfr13I GGNCC 7 cut(s) 24, 257, 386, 1316, 2050, 2051, 2081
CseI GACGC 1 cut(s) 79
Csp6I GTAC 2 cut(s) 1096, 1686
CspCI CAANNNNNGTGG 2 cut(s) 1645, 1680
CviQI GTAC 2 cut(s) 1096, 1686
DdeI CTNAG 6 cut(s) 411, 995, 1106, 1241, 1266, 1293
DpnI GATC 5 cut(s) 602, 613, 987, 1469, 2151
DpnII GATC 5 cut(s) 600, 611, 985, 1467, 2149
DraIII CACNNNGTG 1 cut(s) 1800
EaeI YGGCCR 1 cut(s) 1401
Eam1104I CTCTTC 6 cut(s) 306, 701, 1253, 1509, 1602, 2097
EarI CTCTTC 6 cut(s) 306, 701, 1253, 1509, 1602, 2097
Ecl136II GAGCTC 2 cut(s) 319, 1263
Eco105I TACGTA 1 cut(s) 721
Eco130I CCWWGG 1 cut(s) 706
Eco24I GRGCYC 3 cut(s) 321, 1265, 2054
Eco31I GGTCTC 2 cut(s) 827, 1865
Eco32I GATATC 1 cut(s) 1765
Eco47I GGWCC 3 cut(s) 257, 386, 2081
Eco53kI GAGCTC 2 cut(s) 319, 1263
Eco57I CTGAAG 3 cut(s) 125, 737, 1547
Eco88I CYCGRG 1 cut(s) 1584
EcoICRI GAGCTC 2 cut(s) 319, 1263
EcoO109I RGGNCCY 4 cut(s) 24, 1316, 2050, 2051
EcoRII CCWGG 1 cut(s) 1398
EcoRV GATATC 1 cut(s) 1765
EcoT14I CCWWGG 1 cut(s) 706
EcoT38I GRGCYC 3 cut(s) 321, 1265, 2054
ErhI CCWWGG 1 cut(s) 706
FalI AAGNNNNNCTT 2 cut(s) 1800, 1832
FaqI GGGAC 6 cut(s) 187, 243, 561, 690, 1632, 1901
FblI GTMKAC 1 cut(s) 1450
Fnu4HI GCNGC 5 cut(s) 122, 201, 692, 957, 1145
FokI GGATG 5 cut(s) 395, 1140, 1156, 1196, 1283
FriOI GRGCYC 3 cut(s) 321, 1265, 2054
Fsp4HI GCNGC 5 cut(s) 122, 201, 692, 957, 1145
GluI GCNGC 5 cut(s) 122, 201, 692, 957, 1145
GsaI CCCAGC 2 cut(s) 164, 677
GsuI CTGGAG 2 cut(s) 834, 981
HaeIII GGCC 6 cut(s) 25, 711, 1318, 1403, 1710, 2052
HapII CCGG 3 cut(s) 64, 306, 797
HgaI GACGC 1 cut(s) 79
Hin1I GRCGYC 1 cut(s) 71
HincII GTYRAC 1 cut(s) 1299
HindII GTYRAC 1 cut(s) 1299
HinfI GANTC 5 cut(s) 100, 999, 1526, 1567, 1589
HpaI GTTAAC 1 cut(s) 1299
HpaII CCGG 3 cut(s) 64, 306, 797
HphI GGTGA 1 cut(s) 947
Hpy166II GTNNAC 4 cut(s) 85, 363, 1299, 1451
Hpy188I TCNGA 4 cut(s) 105, 1267, 1566, 1594
Hpy8I GTNNAC 4 cut(s) 85, 363, 1299, 1451
Hpy99I CGWCG 1 cut(s) 935
HpyAV CCTTC 5 cut(s) 38, 761, 1008, 1055, 1307
HpyCH4III ACNGT 7 cut(s) 217, 472, 703, 1060, 1630, 1942, 2035
HpyCH4IV ACGT 4 cut(s) 720, 930, 1349, 1716
HpyF10VI GCNNNNNNNGC 6 cut(s) 567, 576, 956, 1141, 1150, 1324
HpyF3I CTNAG 6 cut(s) 411, 995, 1106, 1241, 1266, 1293
HpySE526I ACGT 4 cut(s) 720, 930, 1349, 1716
Hsp92I GRCGYC 1 cut(s) 71
Kpn2I TCCGGA 1 cut(s) 63
KspAI GTTAAC 1 cut(s) 1299
Kzo9I GATC 5 cut(s) 600, 611, 985, 1467, 2149
LguI GCTCTTC 2 cut(s) 701, 1253
LmnI GCTCC 4 cut(s) 316, 324, 1132, 1909
Lsp1109I GCAGC 5 cut(s) 108, 212, 678, 943, 1131
LweI GCATC 2 cut(s) 1162, 1888
MaeII ACGT 4 cut(s) 720, 930, 1349, 1716
MaeIII GTNAC 4 cut(s) 835, 1412, 1579, 2121
MalI GATC 5 cut(s) 602, 613, 987, 1469, 2151
MboI GATC 5 cut(s) 600, 611, 985, 1467, 2149
MhlI GDGCHC 4 cut(s) 321, 1209, 1265, 2054
MlsI TGGCCA 1 cut(s) 1403
MluCI AATT 7 cut(s) 167, 540, 564, 865, 1029, 1749, 2022
MluNI TGGCCA 1 cut(s) 1403
MlyI GAGTC 1 cut(s) 1561
MmeI TCCRAC 1 cut(s) 1740
Mox20I TGGCCA 1 cut(s) 1403
MroI TCCGGA 1 cut(s) 63
MscI TGGCCA 1 cut(s) 1403
MseI TTAA 2 cut(s) 563, 1298
MslI CAYNNNNRTG 3 cut(s) 57, 933, 1520
Msp20I TGGCCA 1 cut(s) 1403
MspA1I CMGCKG 1 cut(s) 255
MspI CCGG 3 cut(s) 64, 306, 797
MspR9I CCNGG 3 cut(s) 307, 798, 1400
MvaI CCWGG 1 cut(s) 1400
MwoI GCNNNNNNNGC 6 cut(s) 567, 576, 956, 1141, 1150, 1324
NciI CCSGG 2 cut(s) 307, 798
NcoI CCATGG 1 cut(s) 706
NdeII GATC 5 cut(s) 600, 611, 985, 1467, 2149
NlaIV GGNNCC 5 cut(s) 26, 259, 2032, 2051, 2052
NmeAIII GCCGAG 1 cut(s) 65
NmuCI GTSAC 3 cut(s) 1412, 1579, 2121
NspI RCATGY 2 cut(s) 56, 653
OliI CACNNNNGTG 1 cut(s) 933
PaeI GCATGC 2 cut(s) 56, 653
PciSI GCTCTTC 2 cut(s) 701, 1253
PfeI GAWTC 4 cut(s) 100, 999, 1526, 1589
PflMI CCANNNNNTGG 1 cut(s) 1800
PfoI TCCNGGA 1 cut(s) 796
PkrI GCNGC 5 cut(s) 123, 202, 693, 958, 1146
PleI GAGTC 1 cut(s) 1561
PpsI GAGTC 1 cut(s) 1561
Ppu21I YACGTR 1 cut(s) 721
Psp124BI GAGCTC 2 cut(s) 321, 1265
Psp6I CCWGG 1 cut(s) 1398
PspFI CCCAGC 2 cut(s) 160, 673
PspGI CCWGG 1 cut(s) 1398
PspN4I GGNNCC 5 cut(s) 26, 259, 2032, 2051, 2052
PspOMI GGGCCC 1 cut(s) 2050
PspPI GGNCC 7 cut(s) 24, 257, 386, 1316, 2050, 2051, 2081
PstI CTGCAG 1 cut(s) 1149
PstNI CAGNNNCTG 1 cut(s) 1307
RsaI GTAC 2 cut(s) 1097, 1687
RsaNI GTAC 2 cut(s) 1096, 1686
RseI CAYNNNNRTG 3 cut(s) 57, 933, 1520
SacI GAGCTC 2 cut(s) 321, 1265
SapI GCTCTTC 2 cut(s) 701, 1253
SaqAI TTAA 2 cut(s) 563, 1298
SatI GCNGC 5 cut(s) 122, 201, 692, 957, 1145
Sau3AI GATC 5 cut(s) 600, 611, 985, 1467, 2149
Sau96I GGNCC 7 cut(s) 24, 257, 386, 1316, 2050, 2051, 2081
SchI GAGTC 1 cut(s) 1561
ScrFI CCNGG 3 cut(s) 307, 798, 1400
SduI GDGCHC 4 cut(s) 321, 1209, 1265, 2054
SfaNI GCATC 2 cut(s) 1162, 1888
SfcI CTRYAG 5 cut(s) 285, 1059, 1145, 1941, 2186
SinI GGWCC 3 cut(s) 257, 386, 2081
SmiMI CAYNNNNRTG 3 cut(s) 57, 933, 1520
SmlI CTYRAG 2 cut(s) 604, 1408
SmoI CTYRAG 2 cut(s) 604, 1408
SnaBI TACGTA 1 cut(s) 721
SphI GCATGC 2 cut(s) 56, 653
Sse9I AATT 7 cut(s) 167, 540, 564, 865, 1029, 1749, 2022
SsiI CCGC 4 cut(s) 255, 355, 1093, 1478
SspI AATATT 2 cut(s) 150, 762
SstI GAGCTC 2 cut(s) 321, 1265
StyD4I CCNGG 3 cut(s) 305, 796, 1398
StyI CCWWGG 1 cut(s) 706
TaaI ACNGT 7 cut(s) 217, 472, 703, 1060, 1630, 1942, 2035
TaiI ACGT 4 cut(s) 723, 933, 1352, 1719
TaqI TCGA 1 cut(s) 35
TasI AATT 7 cut(s) 167, 540, 564, 865, 1029, 1749, 2022
TfiI GAWTC 4 cut(s) 100, 999, 1526, 1589
Tru1I TTAA 2 cut(s) 563, 1298
Tru9I TTAA 2 cut(s) 563, 1298
TscAI CASTG 7 cut(s) 214, 706, 858, 1154, 1168, 1633, 1737
TseFI GTSAC 3 cut(s) 1412, 1579, 2121
TseI GCWGC 5 cut(s) 121, 200, 691, 956, 1144
Tsp45I GTSAC 3 cut(s) 1412, 1579, 2121
TspDTI ATGAA 5 cut(s) 424, 523, 1368, 1421, 2034
TspRI CASTG 7 cut(s) 214, 706, 858, 1154, 1168, 1633, 1737
Van91I CCANNNNNTGG 1 cut(s) 1800
VpaK11BI GGWCC 3 cut(s) 257, 386, 2081
XapI RAATTY 4 cut(s) 167, 540, 865, 2022
XceI RCATGY 2 cut(s) 56, 653
XmiI GTMKAC 1 cut(s) 1450
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.