Rmu_sc0002923.1_g000015

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002923.1
OG0000126
Physical Location & Seq
Forward (+)
43720 .. 47456
3737 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002923.1_g000015.1.cds

Sequence Viewer

Length: 1953 bp
atggtcgaagtcgcagcgacggaggctgacgtcggcattgcgtgtcagaccgtgcaatcccatctctcttacctcgttgatcaagtgagcttggggttggggatgagcacggagcatcacgcccgggcccaagagctcaaccaacgcctccgcgaggttgaattgaaagaaaagcagttggattcactccaccgaagactcaaaaggagagagaagaaagtcgaagagctcaggttgagacaattcgagcctcgagtcaagacggaggaggaggaggaggagcagtcggtggatcaatctatcatgaacatggactgccgcgagttgctggtgttcatgaatgagcaattcagaagaattgatttggcgggagcccggatgtcggctgttcttcgagcatctccagaccctggaaagttggttctggaaggagtgcgagggttttatcctttgaatcggaatgtggatggaagcgagaccgaaatgagtttgaggtgtatgagaaagagttgtgttctgtttttgcaggagttgaagagaatgtcgccgcaaattagtgctccggtgagagaggaggcaaagaagttagcagctgagtggaaagcgaagatggaggaggggagtgagaatagttgggaggccaaagggattttgcggctcattgctgcttatggtttggatggtattatttgtgatgctgaggagcttcagagtcttgttgctatggtggagcagctggaacaatctagtgaactaagaaggactgttggtttgacagatggggcaccggggaccaatgccaattcttccattgttaagatcgagggacgagaatcctctcttgctagaaatgcagcgactctttcttctccgaatcattctttgccgaatgacatgttggtttctcttaagtcgtcatcggataaggcaaaacttgtgttgaaattgataaaaagatctttaacccaacactggacaaatggtgatgttagctccaaagaaatggttgtatcgagtaacatttctctattgaattttctaatgggagcctcagctcatgttggacctcatctgaaagatggtgcaacaaatctagcagcccagtggaaagcaaatatgacagctgatactgaaaactcattggagaatttgggattttcgctgtttatagctatatatggactgatttctactttaaacgaagatgagattgtaaagcttcttggaaagatttcacagcataaacggtccctagaattatgtcagacacatggttttgcagataagattgctggttttattgggaaacttattgaaaagaagcaagtgattgacgctgttagatcgatttgtttgttcaagttaattgacaagtttcccccagtacagttgttaaaagcatatgtgcaggatgcaaaggagtggtctgaattagtttgcagcttaaagatatcagatgctgaaaaggagaaggctgtaaatagaaaaatagctgatcttagagctgtcattcaatgcatcaaagattgcaaccttgagtctgaatacccgtccatgactgttgaaatgcaaatagatcagctgcaaatactcgaggagaattggagaccatcttgtgtctccaaagttagacaacaagagagaaaaaggaagagacctaatatcaggggatggtgcagaccacgcacccctaattgtattaatgaaaccgctttgatgaccttcgttaaccccttgagcaccagtgtgcctcctactgcccctgcatcatcgtcgcacacctgctgcccctgcagcacagcagcacgctggttcctgtgcagatcagcctgtttgaacgccccgaaacgtcttgatcgagacctcagctcaaaatccttccttcatcaaagttgttcgtctctgcctcttttatttgaactccaaatttcagccctattggaatcgttttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida TEX13

Protein Analysis

650

Amino Acids

72.81

Weight (kDa)

8.0

Isoelectric Point (pI)

54.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1790
AatII GACGTC 1 cut(s) 33
Acc36I ACCTGC 1 cut(s) 1790
AccB1I GGYRCC 1 cut(s) 784
AccB7I CCANNNNNTGG 1 cut(s) 410
AccII CGCG 2 cut(s) 153, 321
AciI CCGC 6 cut(s) 151, 319, 368, 548, 655, 1710
AclWI GGATC 1 cut(s) 300
AcsI RAATTY 3 cut(s) 1033, 1147, 1926
AcuI CTGAAG 1 cut(s) 692
AcyI GRCGYC 1 cut(s) 30
AfaI GTAC 1 cut(s) 1386
AfiI CCNNNNNNNGG 4 cut(s) 154, 382, 410, 972
AflII CTTAAG 1 cut(s) 908
AflIII ACRYGT 1 cut(s) 894
AjnI CCWGG 1 cut(s) 409
AjuI GAANNNNNNNTTGG 2 cut(s) 881, 913
AleI CACNNNNGTG 1 cut(s) 1745
AloI GAACNNNNNNTCC 2 cut(s) 405, 437
Alw21I GWGCWC 5 cut(s) 110, 138, 231, 562, 1742
Alw26I GTCTC 7 cut(s) 232, 470, 1600, 1624, 1648, 1854, 1905
AlwI GGATC 1 cut(s) 300
AlwNI CAGNNNCTG 2 cut(s) 410, 1460
Ama87I CYCGRG 3 cut(s) 123, 252, 1592
AoxI GGCC 2 cut(s) 126, 639
ApaI GGGCCC 1 cut(s) 130
ApoI RAATTY 3 cut(s) 1033, 1147, 1926
ArsI GACNNNNNNTTYG 4 cut(s) 754, 786, 1409, 1441
AseI ATTAAT 1 cut(s) 1701
Asp700I GAANNNNTTC 1 cut(s) 1231
AspS9I GGNCC 5 cut(s) 126, 127, 792, 1064, 1248
AsuC2I CCSGG 4 cut(s) 124, 125, 376, 789
AsuHPI GGTGA 2 cut(s) 577, 995
AvaI CYCGRG 3 cut(s) 123, 252, 1592
AvaII GGWCC 3 cut(s) 792, 1064, 1248
BaeGI GKGCMC 2 cut(s) 130, 787
BanI GGYRCC 1 cut(s) 784
BanII GRGCYC 4 cut(s) 130, 138, 231, 376
BbsI GAAGAC 1 cut(s) 202
Bbv12I GWGCWC 5 cut(s) 110, 138, 231, 562, 1742
BbvCI CCTCAGC 3 cut(s) 699, 1051, 1865
BccI CCATC 8 cut(s) 69, 461, 604, 674, 773, 1073, 1618, 1665
BcgI CGANNNNNNTGC 2 cut(s) 1755, 1789
BciT130I CCWGG 1 cut(s) 411
BclI TGATCA 1 cut(s) 79
BcnI CCSGG 4 cut(s) 124, 125, 376, 789
BcoDI GTCTC 7 cut(s) 232, 470, 1600, 1624, 1648, 1854, 1905
BfaI CTAG 4 cut(s) 747, 846, 1094, 1253
BfmI CTRYAG 1 cut(s) 1792
BfrI CTTAAG 1 cut(s) 908
BfuAI ACCTGC 1 cut(s) 1790
BglII AGATCT 1 cut(s) 956
Bme1390I CCNGG 5 cut(s) 124, 125, 376, 411, 789
Bme18I GGWCC 3 cut(s) 792, 1064, 1248
BmeT110I CYCGRG 3 cut(s) 123, 252, 1592
BmgT120I GGNCC 5 cut(s) 126, 127, 792, 1064, 1248
BmiI GGNNCC 7 cut(s) 128, 373, 786, 793, 1048, 1250, 1814
BmrFI CCNGG 5 cut(s) 124, 125, 376, 411, 789
BmrI ACTGGG 2 cut(s) 1096, 1376
BmsI GCATC 7 cut(s) 124, 407, 685, 1402, 1447, 1527, 1775
BmuI ACTGGG 2 cut(s) 1096, 1376
BpiI GAAGAC 1 cut(s) 202
BpmI CTGGAG 1 cut(s) 387
Bpu10I CCTNAGC 4 cut(s) 230, 699, 1051, 1865
BpuEI CTTGAG 2 cut(s) 1556, 1756
BpuMI CCSGG 4 cut(s) 124, 125, 376, 789
Bsa29I ATCGAT 1 cut(s) 1346
BsaHI GRCGYC 1 cut(s) 30
BsaI GGTCTC 4 cut(s) 470, 1600, 1648, 1854
BsaJI CCNNGG 3 cut(s) 123, 409, 788
BsaWI WCCGGW 1 cut(s) 562
BsaXI ACNNNNNCTCC 2 cut(s) 269, 299
Bsc4I CCNNNNNNNGG 4 cut(s) 154, 382, 410, 972
Bse1I ACTGG 4 cut(s) 977, 1102, 1382, 1743
Bse3DI GCAATG 2 cut(s) 36, 660
BseBI CCWGG 1 cut(s) 411
BseCI ATCGAT 1 cut(s) 1346
BseDI CCNNGG 3 cut(s) 123, 409, 788
BseGI GGATG 6 cut(s) 108, 384, 472, 685, 1417, 1676
BseLI CCNNNNNNNGG 4 cut(s) 154, 382, 410, 972
BseMI GCAATG 2 cut(s) 36, 660
BseMII CTCAG 5 cut(s) 244, 585, 690, 1065, 1879
BseNI ACTGG 4 cut(s) 977, 1102, 1382, 1743
BseRI GAGGAG 9 cut(s) 281, 284, 287, 290, 293, 587, 629, 716, 1610
BseSI GKGCMC 2 cut(s) 130, 787
BsgI GTGCAG 3 cut(s) 1427, 1696, 1840
Bsh1236I CGCG 2 cut(s) 153, 321
BshFI GGCC 2 cut(s) 128, 641
BshNI GGYRCC 1 cut(s) 784
BshVI ATCGAT 1 cut(s) 1346
BsiHKAI GWGCWC 5 cut(s) 110, 138, 231, 562, 1742
BsiHKCI CYCGRG 3 cut(s) 123, 252, 1592
BsiSI CCGG 4 cut(s) 124, 376, 563, 788
BslFI GGGAC 3 cut(s) 805, 840, 1234
BslI CCNNNNNNNGG 4 cut(s) 154, 382, 410, 972
BsmAI GTCTC 7 cut(s) 232, 470, 1600, 1624, 1648, 1854, 1905
BsmBI CGTCTC 1 cut(s) 1905
BsmFI GGGAC 3 cut(s) 805, 840, 1234
BsnI GGCC 2 cut(s) 128, 641
Bso31I GGTCTC 4 cut(s) 470, 1600, 1648, 1854
BsoBI CYCGRG 3 cut(s) 123, 252, 1592
Bsp120I GGGCCC 1 cut(s) 126
Bsp1286I GDGCHC 8 cut(s) 110, 130, 138, 231, 376, 562, 787, 1742
Bsp143I GATC 9 cut(s) 79, 292, 819, 956, 1343, 1495, 1576, 1823, 1855
BspACI CCGC 6 cut(s) 151, 319, 368, 548, 655, 1710
BspANI GGCC 2 cut(s) 128, 641
BspCNI CTCAG 5 cut(s) 243, 586, 691, 1064, 1878
BspDI ATCGAT 1 cut(s) 1346
BspFNI CGCG 2 cut(s) 153, 321
BspHI TCATGA 2 cut(s) 303, 336
BspLI GGNNCC 7 cut(s) 128, 373, 786, 793, 1048, 1250, 1814
BspMAI CTGCAG 1 cut(s) 1796
BspMI ACCTGC 1 cut(s) 1790
BspPI GGATC 1 cut(s) 300
BspQI GCTCTTC 1 cut(s) 219
BspT107I GGYRCC 1 cut(s) 784
BspTI CTTAAG 1 cut(s) 908
BspTNI GGTCTC 4 cut(s) 470, 1600, 1648, 1854
BsrDI GCAATG 2 cut(s) 36, 660
BsrI ACTGG 4 cut(s) 977, 1102, 1382, 1743
BssECI CCNNGG 3 cut(s) 123, 409, 788
BssMI GATC 9 cut(s) 79, 292, 819, 956, 1343, 1495, 1576, 1823, 1855
BssNI GRCGYC 1 cut(s) 30
Bst2UI CCWGG 1 cut(s) 411
Bst4CI ACNGT 5 cut(s) 52, 766, 1248, 1389, 1561
Bst6I CTCTTC 3 cut(s) 219, 530, 1646
BstACI GRCGYC 1 cut(s) 30
BstAFI CTTAAG 1 cut(s) 908
BstC8I GCNNGC 1 cut(s) 1807
BstDEI CTNAG 7 cut(s) 230, 594, 699, 755, 1051, 1499, 1865
BstENI CCTNNNNNAGG 1 cut(s) 152
BstF5I GGATG 6 cut(s) 108, 384, 472, 685, 1417, 1676
BstFNI CGCG 2 cut(s) 153, 321
BstKTI GATC 9 cut(s) 82, 295, 822, 959, 1346, 1498, 1579, 1826, 1858
BstMAI GTCTC 7 cut(s) 232, 470, 1600, 1624, 1648, 1854, 1905
BstMBI GATC 9 cut(s) 79, 292, 819, 956, 1343, 1495, 1576, 1823, 1855
BstMWI GCNNNNNNNGC 5 cut(s) 23, 851, 1683, 1791, 1794
BstNI CCWGG 1 cut(s) 411
BstNSI RCATGY 1 cut(s) 898
BstSCI CCNGG 5 cut(s) 122, 123, 374, 409, 787
BstSFI CTRYAG 1 cut(s) 1792
BstSLI GKGCMC 2 cut(s) 130, 787
BstUI CGCG 2 cut(s) 153, 321
BstV2I GAAGAC 1 cut(s) 202
BstX2I RGATCY 1 cut(s) 956
BstXI CCANNNNNNTGG 1 cut(s) 1003
BstYI RGATCY 1 cut(s) 956
Bsu15I ATCGAT 1 cut(s) 1346
BsuRI GGCC 2 cut(s) 128, 641
BsuTUI ATCGAT 1 cut(s) 1346
BtsCI GGATG 6 cut(s) 108, 384, 472, 685, 1417, 1676
BtsIMutI CAGTG 3 cut(s) 970, 1109, 1750
BveI ACCTGC 1 cut(s) 1790
Cac8I GCNNGC 1 cut(s) 1807
CaiI CAGNNNCTG 2 cut(s) 410, 1460
CciI TCATGA 2 cut(s) 303, 336
Cfr13I GGNCC 5 cut(s) 126, 127, 792, 1064, 1248
Cfr9I CCCGGG 1 cut(s) 123
ClaI ATCGAT 1 cut(s) 1346
CseI GACGC 1 cut(s) 1343
Csp6I GTAC 1 cut(s) 1385
CviAII CATG 7 cut(s) 304, 310, 337, 895, 1058, 1271, 1555
CviQI GTAC 1 cut(s) 1385
DdeI CTNAG 7 cut(s) 230, 594, 699, 755, 1051, 1499, 1865
DpnI GATC 9 cut(s) 81, 294, 821, 958, 1345, 1497, 1578, 1825, 1857
DpnII GATC 9 cut(s) 79, 292, 819, 956, 1343, 1495, 1576, 1823, 1855
DraI TTTAAA 1 cut(s) 1197
Eam1104I CTCTTC 3 cut(s) 219, 530, 1646
EarI CTCTTC 3 cut(s) 219, 530, 1646
Ecl136II GAGCTC 2 cut(s) 136, 229
Eco24I GRGCYC 4 cut(s) 130, 138, 231, 376
Eco31I GGTCTC 4 cut(s) 470, 1600, 1648, 1854
Eco32I GATATC 1 cut(s) 1452
Eco47I GGWCC 3 cut(s) 792, 1064, 1248
Eco53kI GAGCTC 2 cut(s) 136, 229
Eco57I CTGAAG 1 cut(s) 692
Eco88I CYCGRG 3 cut(s) 123, 252, 1592
EcoICRI GAGCTC 2 cut(s) 136, 229
EcoNI CCTNNNNNAGG 1 cut(s) 152
EcoRII CCWGG 1 cut(s) 409
EcoRV GATATC 1 cut(s) 1452
EcoT22I ATGCAT 1 cut(s) 1520
EcoT38I GRGCYC 4 cut(s) 130, 138, 231, 376
Esp3I CGTCTC 1 cut(s) 1905
FaeI CATG 7 cut(s) 307, 313, 340, 898, 1061, 1274, 1558
FaqI GGGAC 3 cut(s) 805, 840, 1234
FatI CATG 7 cut(s) 303, 309, 336, 894, 1057, 1270, 1554
FauI CCCGC 1 cut(s) 361
FauNDI CATATG 1 cut(s) 1402
FbaI TGATCA 1 cut(s) 79
FokI GGATG 6 cut(s) 115, 391, 479, 692, 1424, 1683
FriOI GRGCYC 4 cut(s) 130, 138, 231, 376
FspBI CTAG 4 cut(s) 747, 846, 1094, 1253
GsuI CTGGAG 1 cut(s) 387
HaeIII GGCC 2 cut(s) 128, 641
HapII CCGG 4 cut(s) 124, 376, 563, 788
HgaI GACGC 1 cut(s) 1343
Hin1I GRCGYC 1 cut(s) 30
Hin1II CATG 7 cut(s) 307, 313, 340, 898, 1061, 1274, 1558
HincII GTYRAC 1 cut(s) 1729
HindII GTYRAC 1 cut(s) 1729
HindIII AAGCTT 1 cut(s) 1217
HpaI GTTAAC 1 cut(s) 1729
HpaII CCGG 4 cut(s) 124, 376, 563, 788
HphI GGTGA 2 cut(s) 577, 995
Hpy166II GTNNAC 2 cut(s) 752, 1729
Hpy188III TCNNGA 7 cut(s) 259, 304, 337, 404, 425, 1853, 1859
Hpy8I GTNNAC 2 cut(s) 752, 1729
Hpy99I CGWCG 3 cut(s) 22, 35, 1777
HpyAV CCTTC 6 cut(s) 422, 753, 1465, 1732, 1888, 1892
HpyCH4III ACNGT 5 cut(s) 52, 766, 1248, 1389, 1561
HpyCH4IV ACGT 2 cut(s) 30, 1849
HpyF10VI GCNNNNNNNGC 5 cut(s) 23, 851, 1683, 1791, 1794
HpyF3I CTNAG 7 cut(s) 230, 594, 699, 755, 1051, 1499, 1865
HpySE526I ACGT 2 cut(s) 30, 1849
Hsp92I GRCGYC 1 cut(s) 30
Hsp92II CATG 7 cut(s) 307, 313, 340, 898, 1061, 1274, 1558
Ksp22I TGATCA 1 cut(s) 79
KspAI GTTAAC 1 cut(s) 1729
Kzo9I GATC 9 cut(s) 79, 292, 819, 956, 1343, 1495, 1576, 1823, 1855
LguI GCTCTTC 1 cut(s) 219
LmnI GCTCC 8 cut(s) 112, 280, 371, 565, 703, 730, 998, 1046
LweI GCATC 7 cut(s) 124, 407, 685, 1402, 1447, 1527, 1775
MaeI CTAG 4 cut(s) 747, 846, 1094, 1253
MaeII ACGT 2 cut(s) 30, 1849
MaeIII GTNAC 1 cut(s) 1016
MalI GATC 9 cut(s) 81, 294, 821, 958, 1345, 1497, 1578, 1825, 1857
MboI GATC 9 cut(s) 79, 292, 819, 956, 1343, 1495, 1576, 1823, 1855
MflI RGATCY 1 cut(s) 956
MhlI GDGCHC 8 cut(s) 110, 130, 138, 231, 376, 562, 787, 1742
MlyI GAGTC 5 cut(s) 192, 264, 721, 853, 1547
MmeI TCCRAC 2 cut(s) 159, 1042
Mph1103I ATGCAT 1 cut(s) 1520
MroXI GAANNNNTTC 1 cut(s) 1231
MseI TTAA 9 cut(s) 816, 909, 962, 1196, 1364, 1394, 1445, 1701, 1728
MslI CAYNNNNRTG 2 cut(s) 308, 1745
MspA1I CMGCKG 4 cut(s) 593, 736, 1124, 1582
MspCI CTTAAG 1 cut(s) 908
MspI CCGG 4 cut(s) 124, 376, 563, 788
MspR9I CCNGG 5 cut(s) 124, 125, 376, 411, 789
MvaI CCWGG 1 cut(s) 411
MvnI CGCG 2 cut(s) 153, 321
MwoI GCNNNNNNNGC 5 cut(s) 23, 851, 1683, 1791, 1794
NciI CCSGG 4 cut(s) 124, 125, 376, 789
NdeI CATATG 1 cut(s) 1402
NdeII GATC 9 cut(s) 79, 292, 819, 956, 1343, 1495, 1576, 1823, 1855
NlaIII CATG 7 cut(s) 307, 313, 340, 898, 1061, 1274, 1558
NlaIV GGNNCC 7 cut(s) 128, 373, 786, 793, 1048, 1250, 1814
NsiI ATGCAT 1 cut(s) 1520
NspI RCATGY 1 cut(s) 898
OliI CACNNNNGTG 1 cut(s) 1745
PaeR7I CTCGAG 2 cut(s) 252, 1592
PagI TCATGA 2 cut(s) 303, 336
PaqCI CACCTGC 1 cut(s) 1790
PciI ACATGT 1 cut(s) 894
PciSI GCTCTTC 1 cut(s) 219
PcsI WCGNNNNNNNCGW 1 cut(s) 1855
PdmI GAANNNNTTC 1 cut(s) 1231
PfeI GAWTC 5 cut(s) 182, 454, 833, 874, 1943
PflMI CCANNNNNTGG 1 cut(s) 410
PleI GAGTC 5 cut(s) 192, 263, 720, 853, 1546
PpsI GAGTC 5 cut(s) 192, 263, 720, 853, 1546
PscI ACATGT 1 cut(s) 894
PshBI ATTAAT 1 cut(s) 1701
Psp124BI GAGCTC 2 cut(s) 138, 231
Psp6I CCWGG 1 cut(s) 409
PspGI CCWGG 1 cut(s) 409
PspN4I GGNNCC 7 cut(s) 128, 373, 786, 793, 1048, 1250, 1814
PspOMI GGGCCC 1 cut(s) 126
PspPI GGNCC 5 cut(s) 126, 127, 792, 1064, 1248
PspXI VCTCGAGB 2 cut(s) 252, 1592
PstI CTGCAG 1 cut(s) 1796
PstNI CAGNNNCTG 2 cut(s) 410, 1460
PsuI RGATCY 1 cut(s) 956
PvuII CAGCTG 4 cut(s) 593, 736, 1124, 1582
RsaI GTAC 1 cut(s) 1386
RsaNI GTAC 1 cut(s) 1385
RseI CAYNNNNRTG 2 cut(s) 308, 1745
SacI GAGCTC 2 cut(s) 138, 231
SapI GCTCTTC 1 cut(s) 219
SaqAI TTAA 9 cut(s) 816, 909, 962, 1196, 1364, 1394, 1445, 1701, 1728
Sau3AI GATC 9 cut(s) 79, 292, 819, 956, 1343, 1495, 1576, 1823, 1855
Sau96I GGNCC 5 cut(s) 126, 127, 792, 1064, 1248
SchI GAGTC 5 cut(s) 192, 264, 721, 853, 1547
ScrFI CCNGG 5 cut(s) 124, 125, 376, 411, 789
SduI GDGCHC 8 cut(s) 110, 130, 138, 231, 376, 562, 787, 1742
SfaNI GCATC 7 cut(s) 124, 407, 685, 1402, 1447, 1527, 1775
SfcI CTRYAG 1 cut(s) 1792
Sfr274I CTCGAG 2 cut(s) 252, 1592
SinI GGWCC 3 cut(s) 792, 1064, 1248
SlaI CTCGAG 2 cut(s) 252, 1592
SmaI CCCGGG 1 cut(s) 125
SmiMI CAYNNNNRTG 2 cut(s) 308, 1745
SmlI CTYRAG 5 cut(s) 252, 908, 1535, 1592, 1735
SmoI CTYRAG 5 cut(s) 252, 908, 1535, 1592, 1735
SrfI GCCCGGGC 1 cut(s) 125
SsiI CCGC 6 cut(s) 151, 319, 368, 548, 655, 1710
SspMI CTAG 4 cut(s) 747, 846, 1094, 1253
SstI GAGCTC 2 cut(s) 138, 231
StyD4I CCNGG 5 cut(s) 122, 123, 374, 409, 787
TaaI ACNGT 5 cut(s) 52, 766, 1248, 1389, 1561
TaiI ACGT 2 cut(s) 33, 1852
TaqII GACCGA 1 cut(s) 494
TatI WGTACW 1 cut(s) 1384
TauI GCSGC 3 cut(s) 321, 550, 658
TfiI GAWTC 5 cut(s) 182, 454, 833, 874, 1943
Tru1I TTAA 9 cut(s) 816, 909, 962, 1196, 1364, 1394, 1445, 1701, 1728
Tru9I TTAA 9 cut(s) 816, 909, 962, 1196, 1364, 1394, 1445, 1701, 1728
TscAI CASTG 3 cut(s) 977, 1109, 1750
TspDTI ATGAA 5 cut(s) 320, 325, 353, 1719, 1874
TspGWI ACGGA 3 cut(s) 35, 125, 278
TspMI CCCGGG 1 cut(s) 123
TspRI CASTG 3 cut(s) 977, 1109, 1750
Van91I CCANNNNNTGG 1 cut(s) 410
Vha464I CTTAAG 1 cut(s) 908
VpaK11BI GGWCC 3 cut(s) 792, 1064, 1248
VspI ATTAAT 1 cut(s) 1701
XagI CCTNNNNNAGG 1 cut(s) 152
XapI RAATTY 3 cut(s) 1033, 1147, 1926
XceI RCATGY 1 cut(s) 898
XhoI CTCGAG 2 cut(s) 252, 1592
XmaI CCCGGG 1 cut(s) 123
XmnI GAANNNNTTC 1 cut(s) 1231
XspI CTAG 4 cut(s) 747, 846, 1094, 1253
ZraI GACGTC 1 cut(s) 31
Zsp2I ATGCAT 1 cut(s) 1520
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.