Rmu_sc0002843.1_g000008

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002843.1
OG0000126
Physical Location & Seq
Forward (+)
22847 .. 25456
2610 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002843.1_g000008.1.cds

Sequence Viewer

Length: 1665 bp
atggtcgaagtcgcagcgaccgaggctgacgtcggcattgcgtgtcagaccgtgcaatcccatctctcttacctcgttgatcaagtgagcttggggttggggacgagcacggagcatctaggttcgagggaggagaggctcaaccaacgcctccgcgaggttgaattgaaagaaaagcagttggattcactccaccgaagactcaaaaggagagagaagaaagttgaagagctcaggttgagacaattcgagcctcgagtcaagacggaggaggagcagtcggtggatcaatctatcatgaacatggactgccgcgagttgctggtgttcatgaatgagcaattcagaagaattgatttggcgggagcccggatgtcggctgttcttcgagcatctccagaccctggaaagttggttctggaaggagtgcgagggttttatcctttgaatcggaatgtggatggaagcgagaccgaaatgagtttgaggtgtatgagaaagagttgtgttctgtttttgcaggagttgaagacaatgtcgccgcaaattagtgctccggtgagagaggaggcaaagaagttagcagctgagtggaaagcgaagatggaggagggcagtgagaatagttgggaggccaaagggcttttgcggctcattgctgcttatggtttggatggtattatttgtgatgctgaggagcttcagactcttgttgctatggtggagcagctggaacaatctagtgaactaagaaggactgttggtttgacagatggggcaccggggaccaatgccaattcttccattgttaagatcgagggacgagaatcctctcttgctagaaatgcagcgactccttcttctccgaatcattctttgccgaatgacacgttggtttctcttaagtcgtcatcggataaggcaaaacttgtgttgaaattgataaaaagatctttaacccaatactggacaaatggtgatgttagctccaaagaaatggttgtattgagtaacatttctctattgaattttctaatgggagcctcagctcatgttggacctcatctgaaagatggtgcaacaaatctagcagcccagtggaaagcaaatatgacagctgatactgaaaactcattggagaatttgggattttcgctgtttatagctatatatggattggtttctactttaaacgaagatgagattgtaaagcttattggaaagatttcacagcataaacagtccctagaattatgtcagacacatggttttgcagataagattgctggtcttattgggaaacttattgaaaagaagcaagtgattgacgctgttagatcgatttgtttgttcaagttaattgacaagtttcccccagtaccgttgttaagagcatatgtacaggatgcaaaggagtggtccgaattagtttgcagcttaaagatatcagatgctgaaaaggagaaggctgtaaatggaaaaatagctgatcttagagctgtcattcaatgcatcaaagattgcaaccttgagtctgaatacccttccatgactgttgaaatgcatatagatcagctgcaaatacttgaggagaattggagaccatcttgtgtctccaaagttaaacaacaagagagaaaaaggaagagacctaatgtcaggtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida TEX13

Protein Analysis

554

Amino Acids

62.01

Weight (kDa)

7.11

Isoelectric Point (pI)

49.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 33
AccB1I GGYRCC 1 cut(s) 778
AccB7I CCANNNNNTGG 1 cut(s) 404
AccII CGCG 2 cut(s) 156, 315
AciI CCGC 5 cut(s) 154, 313, 362, 542, 649
AclWI GGATC 1 cut(s) 294
AcsI RAATTY 2 cut(s) 1027, 1141
AcuI CTGAAG 1 cut(s) 686
AcyI GRCGYC 1 cut(s) 30
AfaI GTAC 2 cut(s) 1380, 1401
AfiI CCNNNNNNNGG 4 cut(s) 157, 376, 404, 966
AflII CTTAAG 1 cut(s) 902
AflIII ACRYGT 1 cut(s) 888
AhdI GACNNNNNGTC 1 cut(s) 1655
AjnI CCWGG 1 cut(s) 403
AjuI GAANNNNNNNTTGG 2 cut(s) 875, 907
AloI GAACNNNNNNTCC 2 cut(s) 399, 431
Alw21I GWGCWC 3 cut(s) 110, 234, 556
Alw26I GTCTC 5 cut(s) 235, 464, 1594, 1618, 1642
AlwI GGATC 1 cut(s) 294
AlwNI CAGNNNCTG 2 cut(s) 404, 1454
Ama87I CYCGRG 1 cut(s) 255
AoxI GGCC 1 cut(s) 633
ApeKI GCWGC 8 cut(s) 14, 584, 659, 727, 848, 1091, 1434, 1576
ApoI RAATTY 2 cut(s) 1027, 1141
ArsI GACNNNNNNTTYG 4 cut(s) 748, 780, 1403, 1435
Asp700I GAANNNNTTC 1 cut(s) 1225
AspS9I GGNCC 3 cut(s) 786, 1058, 1419
AsuC2I CCSGG 2 cut(s) 370, 783
AsuHPI GGTGA 2 cut(s) 571, 989
AvaI CYCGRG 1 cut(s) 255
AvaII GGWCC 3 cut(s) 786, 1058, 1419
BaeGI GKGCMC 1 cut(s) 781
BanI GGYRCC 1 cut(s) 778
BanII GRGCYC 2 cut(s) 234, 370
BbsI GAAGAC 2 cut(s) 205, 536
Bbv12I GWGCWC 3 cut(s) 110, 234, 556
BbvCI CCTCAGC 2 cut(s) 693, 1045
BbvI GCAGC 8 cut(s) 26, 596, 646, 739, 860, 1103, 1446, 1563
BccI CCATC 7 cut(s) 69, 455, 598, 668, 767, 1067, 1612
BciT130I CCWGG 1 cut(s) 405
BclI TGATCA 1 cut(s) 79
BcnI CCSGG 2 cut(s) 370, 783
BcoDI GTCTC 5 cut(s) 235, 464, 1594, 1618, 1642
BfaI CTAG 5 cut(s) 119, 741, 840, 1088, 1247
BfrI CTTAAG 1 cut(s) 902
BglII AGATCT 1 cut(s) 950
Bme1390I CCNGG 3 cut(s) 370, 405, 783
Bme18I GGWCC 3 cut(s) 786, 1058, 1419
BmeRI GACNNNNNGTC 1 cut(s) 1655
BmeT110I CYCGRG 1 cut(s) 255
BmgT120I GGNCC 3 cut(s) 786, 1058, 1419
BmiI GGNNCC 4 cut(s) 367, 780, 787, 1042
BmrFI CCNGG 3 cut(s) 370, 405, 783
BmrI ACTGGG 2 cut(s) 1090, 1370
BmsI GCATC 6 cut(s) 124, 401, 679, 1396, 1441, 1521
BmuI ACTGGG 2 cut(s) 1090, 1370
BpiI GAAGAC 2 cut(s) 205, 536
BpmI CTGGAG 1 cut(s) 381
Bpu10I CCTNAGC 3 cut(s) 233, 693, 1045
BpuEI CTTGAG 2 cut(s) 1550, 1607
BpuMI CCSGG 2 cut(s) 370, 783
Bsa29I ATCGAT 1 cut(s) 1340
BsaHI GRCGYC 1 cut(s) 30
BsaI GGTCTC 3 cut(s) 464, 1594, 1642
BsaJI CCNNGG 3 cut(s) 21, 403, 782
BsaWI WCCGGW 1 cut(s) 556
BsaXI ACNNNNNCTCC 2 cut(s) 263, 293
Bsc4I CCNNNNNNNGG 4 cut(s) 157, 376, 404, 966
Bse1I ACTGG 3 cut(s) 971, 1096, 1376
Bse3DI GCAATG 2 cut(s) 36, 654
BseBI CCWGG 1 cut(s) 405
BseCI ATCGAT 1 cut(s) 1340
BseDI CCNNGG 3 cut(s) 21, 403, 782
BseGI GGATG 4 cut(s) 378, 466, 679, 1411
BseLI CCNNNNNNNGG 4 cut(s) 157, 376, 404, 966
BseMI GCAATG 2 cut(s) 36, 654
BseMII CTCAG 4 cut(s) 247, 579, 684, 1059
BseNI ACTGG 3 cut(s) 971, 1096, 1376
BseRI GAGGAG 7 cut(s) 146, 284, 287, 581, 623, 710, 1604
BseSI GKGCMC 1 cut(s) 781
BseXI GCAGC 8 cut(s) 26, 596, 646, 739, 860, 1103, 1446, 1563
Bsh1236I CGCG 2 cut(s) 156, 315
Bsh1285I CGRYCG 1 cut(s) 21
BshFI GGCC 1 cut(s) 635
BshNI GGYRCC 1 cut(s) 778
BshVI ATCGAT 1 cut(s) 1340
BsiEI CGRYCG 1 cut(s) 21
BsiHKAI GWGCWC 3 cut(s) 110, 234, 556
BsiHKCI CYCGRG 1 cut(s) 255
BsiSI CCGG 3 cut(s) 370, 557, 782
BslFI GGGAC 4 cut(s) 115, 799, 834, 1228
BslI CCNNNNNNNGG 4 cut(s) 157, 376, 404, 966
BsmAI GTCTC 5 cut(s) 235, 464, 1594, 1618, 1642
BsmFI GGGAC 4 cut(s) 115, 799, 834, 1228
BsnI GGCC 1 cut(s) 635
Bso31I GGTCTC 3 cut(s) 464, 1594, 1642
BsoBI CYCGRG 1 cut(s) 255
Bsp1286I GDGCHC 5 cut(s) 110, 234, 370, 556, 781
Bsp1407I TGTACA 1 cut(s) 1399
Bsp143I GATC 7 cut(s) 79, 286, 813, 950, 1337, 1489, 1570
BspACI CCGC 5 cut(s) 154, 313, 362, 542, 649
BspANI GGCC 1 cut(s) 635
BspCNI CTCAG 4 cut(s) 246, 580, 685, 1058
BspDI ATCGAT 1 cut(s) 1340
BspFNI CGCG 2 cut(s) 156, 315
BspHI TCATGA 2 cut(s) 297, 330
BspLI GGNNCC 4 cut(s) 367, 780, 787, 1042
BspPI GGATC 1 cut(s) 294
BspQI GCTCTTC 1 cut(s) 222
BspT107I GGYRCC 1 cut(s) 778
BspTI CTTAAG 1 cut(s) 902
BspTNI GGTCTC 3 cut(s) 464, 1594, 1642
BsrDI GCAATG 2 cut(s) 36, 654
BsrGI TGTACA 1 cut(s) 1399
BsrI ACTGG 3 cut(s) 971, 1096, 1376
BssECI CCNNGG 3 cut(s) 21, 403, 782
BssMI GATC 7 cut(s) 79, 286, 813, 950, 1337, 1489, 1570
BssNI GRCGYC 1 cut(s) 30
Bst2UI CCWGG 1 cut(s) 405
Bst4CI ACNGT 5 cut(s) 52, 760, 1242, 1383, 1555
Bst6I CTCTTC 2 cut(s) 222, 1640
BstACI GRCGYC 1 cut(s) 30
BstAFI CTTAAG 1 cut(s) 902
BstAUI TGTACA 1 cut(s) 1399
BstDEI CTNAG 6 cut(s) 233, 588, 693, 749, 1045, 1493
BstENI CCTNNNNNAGG 1 cut(s) 155
BstF5I GGATG 4 cut(s) 378, 466, 679, 1411
BstFNI CGCG 2 cut(s) 156, 315
BstKTI GATC 7 cut(s) 82, 289, 816, 953, 1340, 1492, 1573
BstMAI GTCTC 5 cut(s) 235, 464, 1594, 1618, 1642
BstMBI GATC 7 cut(s) 79, 286, 813, 950, 1337, 1489, 1570
BstMCI CGRYCG 1 cut(s) 21
BstMWI GCNNNNNNNGC 3 cut(s) 23, 649, 845
BstNI CCWGG 1 cut(s) 405
BstSCI CCNGG 3 cut(s) 368, 403, 781
BstSLI GKGCMC 1 cut(s) 781
BstUI CGCG 2 cut(s) 156, 315
BstV1I GCAGC 8 cut(s) 26, 596, 646, 739, 860, 1103, 1446, 1563
BstV2I GAAGAC 2 cut(s) 205, 536
BstX2I RGATCY 1 cut(s) 950
BstXI CCANNNNNNTGG 1 cut(s) 997
BstYI RGATCY 1 cut(s) 950
Bsu15I ATCGAT 1 cut(s) 1340
BsuRI GGCC 1 cut(s) 635
BsuTUI ATCGAT 1 cut(s) 1340
BtsCI GGATG 4 cut(s) 378, 466, 679, 1411
BtsI GCAGTG 1 cut(s) 622
BtsIMutI CAGTG 2 cut(s) 622, 1103
CaiI CAGNNNCTG 2 cut(s) 404, 1454
CciI TCATGA 2 cut(s) 297, 330
Cfr13I GGNCC 3 cut(s) 786, 1058, 1419
ClaI ATCGAT 1 cut(s) 1340
CseI GACGC 1 cut(s) 1337
Csp6I GTAC 2 cut(s) 1379, 1400
CviAII CATG 6 cut(s) 298, 304, 331, 1052, 1265, 1549
CviQI GTAC 2 cut(s) 1379, 1400
DdeI CTNAG 6 cut(s) 233, 588, 693, 749, 1045, 1493
DpnI GATC 7 cut(s) 81, 288, 815, 952, 1339, 1491, 1572
DpnII GATC 7 cut(s) 79, 286, 813, 950, 1337, 1489, 1570
DraI TTTAAA 1 cut(s) 1191
DriI GACNNNNNGTC 1 cut(s) 1655
Eam1104I CTCTTC 2 cut(s) 222, 1640
Eam1105I GACNNNNNGTC 1 cut(s) 1655
EarI CTCTTC 2 cut(s) 222, 1640
Ecl136II GAGCTC 1 cut(s) 232
Eco24I GRGCYC 2 cut(s) 234, 370
Eco31I GGTCTC 3 cut(s) 464, 1594, 1642
Eco32I GATATC 1 cut(s) 1446
Eco47I GGWCC 3 cut(s) 786, 1058, 1419
Eco53kI GAGCTC 1 cut(s) 232
Eco57I CTGAAG 1 cut(s) 686
Eco88I CYCGRG 1 cut(s) 255
EcoICRI GAGCTC 1 cut(s) 232
EcoNI CCTNNNNNAGG 1 cut(s) 155
EcoRII CCWGG 1 cut(s) 403
EcoRV GATATC 1 cut(s) 1446
EcoT22I ATGCAT 2 cut(s) 1514, 1566
EcoT38I GRGCYC 2 cut(s) 234, 370
FaeI CATG 6 cut(s) 301, 307, 334, 1055, 1268, 1552
FaqI GGGAC 4 cut(s) 115, 799, 834, 1228
FatI CATG 6 cut(s) 297, 303, 330, 1051, 1264, 1548
FauI CCCGC 1 cut(s) 355
FauNDI CATATG 1 cut(s) 1396
FbaI TGATCA 1 cut(s) 79
FokI GGATG 4 cut(s) 385, 473, 686, 1418
FriOI GRGCYC 2 cut(s) 234, 370
FspBI CTAG 5 cut(s) 119, 741, 840, 1088, 1247
GsuI CTGGAG 1 cut(s) 381
HaeIII GGCC 1 cut(s) 635
HapII CCGG 3 cut(s) 370, 557, 782
HgaI GACGC 1 cut(s) 1337
Hin1I GRCGYC 1 cut(s) 30
Hin1II CATG 6 cut(s) 301, 307, 334, 1055, 1268, 1552
HindIII AAGCTT 1 cut(s) 1211
HinfI GANTC 9 cut(s) 185, 201, 258, 448, 706, 827, 853, 868, 1532
HpaII CCGG 3 cut(s) 370, 557, 782
HphI GGTGA 2 cut(s) 571, 989
Hpy166II GTNNAC 1 cut(s) 746
Hpy188III TCNNGA 5 cut(s) 262, 298, 331, 398, 419
Hpy8I GTNNAC 1 cut(s) 746
Hpy99I CGWCG 1 cut(s) 35
HpyAV CCTTC 5 cut(s) 416, 747, 867, 1459, 1554
HpyCH4III ACNGT 5 cut(s) 52, 760, 1242, 1383, 1555
HpyCH4IV ACGT 2 cut(s) 30, 890
HpyF10VI GCNNNNNNNGC 3 cut(s) 23, 649, 845
HpyF3I CTNAG 6 cut(s) 233, 588, 693, 749, 1045, 1493
HpySE526I ACGT 2 cut(s) 30, 890
Hsp92I GRCGYC 1 cut(s) 30
Hsp92II CATG 6 cut(s) 301, 307, 334, 1055, 1268, 1552
Ksp22I TGATCA 1 cut(s) 79
Kzo9I GATC 7 cut(s) 79, 286, 813, 950, 1337, 1489, 1570
LguI GCTCTTC 1 cut(s) 222
LmnI GCTCC 8 cut(s) 112, 274, 365, 559, 697, 724, 992, 1040
Lsp1109I GCAGC 8 cut(s) 26, 596, 646, 739, 860, 1103, 1446, 1563
LweI GCATC 6 cut(s) 124, 401, 679, 1396, 1441, 1521
MaeI CTAG 5 cut(s) 119, 741, 840, 1088, 1247
MaeII ACGT 2 cut(s) 30, 890
MaeIII GTNAC 1 cut(s) 1010
MalI GATC 7 cut(s) 81, 288, 815, 952, 1339, 1491, 1572
MboI GATC 7 cut(s) 79, 286, 813, 950, 1337, 1489, 1570
MflI RGATCY 1 cut(s) 950
MhlI GDGCHC 5 cut(s) 110, 234, 370, 556, 781
MlyI GAGTC 5 cut(s) 195, 267, 700, 847, 1541
MmeI TCCRAC 2 cut(s) 162, 1036
Mph1103I ATGCAT 2 cut(s) 1514, 1566
MroXI GAANNNNTTC 1 cut(s) 1225
MseI TTAA 8 cut(s) 810, 903, 956, 1190, 1358, 1388, 1439, 1623
MslI CAYNNNNRTG 1 cut(s) 302
MspA1I CMGCKG 4 cut(s) 587, 730, 1118, 1576
MspCI CTTAAG 1 cut(s) 902
MspI CCGG 3 cut(s) 370, 557, 782
MspR9I CCNGG 3 cut(s) 370, 405, 783
MvaI CCWGG 1 cut(s) 405
MvnI CGCG 2 cut(s) 156, 315
MwoI GCNNNNNNNGC 3 cut(s) 23, 649, 845
NciI CCSGG 2 cut(s) 370, 783
NdeI CATATG 1 cut(s) 1396
NdeII GATC 7 cut(s) 79, 286, 813, 950, 1337, 1489, 1570
NlaIII CATG 6 cut(s) 301, 307, 334, 1055, 1268, 1552
NlaIV GGNNCC 4 cut(s) 367, 780, 787, 1042
NsiI ATGCAT 2 cut(s) 1514, 1566
PaeR7I CTCGAG 1 cut(s) 255
PagI TCATGA 2 cut(s) 297, 330
PciSI GCTCTTC 1 cut(s) 222
PcsI WCGNNNNNNNCGW 1 cut(s) 18
PdmI GAANNNNTTC 1 cut(s) 1225
PfeI GAWTC 4 cut(s) 185, 448, 827, 868
PflFI GACNNNGTC 1 cut(s) 535
PflMI CCANNNNNTGG 1 cut(s) 404
PleI GAGTC 5 cut(s) 195, 266, 700, 847, 1540
PpsI GAGTC 5 cut(s) 195, 266, 700, 847, 1540
Psp124BI GAGCTC 1 cut(s) 234
Psp6I CCWGG 1 cut(s) 403
PspGI CCWGG 1 cut(s) 403
PspN4I GGNNCC 4 cut(s) 367, 780, 787, 1042
PspPI GGNCC 3 cut(s) 786, 1058, 1419
PspXI VCTCGAGB 1 cut(s) 255
PstNI CAGNNNCTG 2 cut(s) 404, 1454
PsuI RGATCY 1 cut(s) 950
PsyI GACNNNGTC 1 cut(s) 535
PvuII CAGCTG 4 cut(s) 587, 730, 1118, 1576
RsaI GTAC 2 cut(s) 1380, 1401
RsaNI GTAC 2 cut(s) 1379, 1400
RseI CAYNNNNRTG 1 cut(s) 302
SacI GAGCTC 1 cut(s) 234
SapI GCTCTTC 1 cut(s) 222
SaqAI TTAA 8 cut(s) 810, 903, 956, 1190, 1358, 1388, 1439, 1623
Sau3AI GATC 7 cut(s) 79, 286, 813, 950, 1337, 1489, 1570
Sau96I GGNCC 3 cut(s) 786, 1058, 1419
SchI GAGTC 5 cut(s) 195, 267, 700, 847, 1541
ScrFI CCNGG 3 cut(s) 370, 405, 783
SduI GDGCHC 5 cut(s) 110, 234, 370, 556, 781
SfaNI GCATC 6 cut(s) 124, 401, 679, 1396, 1441, 1521
Sfr274I CTCGAG 1 cut(s) 255
SinI GGWCC 3 cut(s) 786, 1058, 1419
SlaI CTCGAG 1 cut(s) 255
SmiMI CAYNNNNRTG 1 cut(s) 302
SmlI CTYRAG 4 cut(s) 255, 902, 1529, 1586
SmoI CTYRAG 4 cut(s) 255, 902, 1529, 1586
SsiI CCGC 5 cut(s) 154, 313, 362, 542, 649
SspMI CTAG 5 cut(s) 119, 741, 840, 1088, 1247
SstI GAGCTC 1 cut(s) 234
StyD4I CCNGG 3 cut(s) 368, 403, 781
TaaI ACNGT 5 cut(s) 52, 760, 1242, 1383, 1555
TaiI ACGT 2 cut(s) 33, 893
TaqI TCGA 7 cut(s) 6, 125, 249, 256, 388, 816, 1340
TaqII GACCGA 2 cut(s) 35, 488
TatI WGTACW 1 cut(s) 1399
TauI GCSGC 3 cut(s) 315, 544, 652
TfiI GAWTC 4 cut(s) 185, 448, 827, 868
Tru1I TTAA 8 cut(s) 810, 903, 956, 1190, 1358, 1388, 1439, 1623
Tru9I TTAA 8 cut(s) 810, 903, 956, 1190, 1358, 1388, 1439, 1623
TscAI CASTG 2 cut(s) 622, 1103
TseI GCWGC 8 cut(s) 14, 584, 659, 727, 848, 1091, 1434, 1576
TspDTI ATGAA 3 cut(s) 314, 319, 347
TspGWI ACGGA 2 cut(s) 125, 281
TspRI CASTG 2 cut(s) 622, 1103
Tth111I GACNNNGTC 1 cut(s) 535
Van91I CCANNNNNTGG 1 cut(s) 404
Vha464I CTTAAG 1 cut(s) 902
VpaK11BI GGWCC 3 cut(s) 786, 1058, 1419
XagI CCTNNNNNAGG 1 cut(s) 155
XapI RAATTY 2 cut(s) 1027, 1141
XhoI CTCGAG 1 cut(s) 255
XmnI GAANNNNTTC 1 cut(s) 1225
XspI CTAG 5 cut(s) 119, 741, 840, 1088, 1247
ZraI GACGTC 1 cut(s) 31
Zsp2I ATGCAT 2 cut(s) 1514, 1566
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.