Rorug02G0644200

Frigida-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000126
Physical Location & Seq
Forward (+)
75514709 .. 75515698
990 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0644200.1

Sequence Viewer

Length: 990 bp
ATGCCTGCAATTCCAGAAGAGCCGCTGCTAATGGCCAACCCGGACCGGTTCTGCATGTTCCCCATTCAGTACCCGGAGATCTGGGAAATGTACAAGAAGGCCGAGGCGTCGTTCTGGACCGCCGAGGAGGTCGACCTCGACCAGGACCAGCGCCACTGGGAGACCCTAACCCCGGGGGAGAAGCACTTCATCACCCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTTCTCGAGAATCTCGCCGGCCGCTTCATGAAGGAGGTACAGGTCTCGGAGGCGCGTGCCTTCTACGGCTTCCAGATCGCGATTGAGAACATCCACTCCGAGATGTACAGCCTTCTTCTCGAGACCTACATCAAAGACTCGGACGAGAAGAGCCGTCTCTTCCGGGCCGTCGACACCATTCCCTGCGTCGCCAAGAAGGCCCAGTGGGCCCTGCGCTGGATCGACGGCTCCGAGACGTTCGCGGAGCGCATCGTGGCCTTTGCCTGCGTGGAGGGGATCTTCTTCTCGGGGAGCTTCTGCGCGATATTTTGGCTAAAAAAGCGCGGGTTAATGCCCGGTCTGACCTTCTCGAACGAGTTGATCTCGCGAGATGAAGGCCTCCACTGCGACTTCGCGTGCCTGCTGTACTCGCTCCTCCGGATAAAGCTCACCGAGGAGCGCGTGAAGTCAATCGTCCGCGACGCGGTTGAGATAGAGAGAGAGTTCGTGTGCGACGCGTTACCGTGCGCCTTAGTAGGAATGAACGGTGATCTGATGAGCCAGTACATCGAGTTCGTGGCTGATAGGCTGGTGGGTGCGTTGGGATACGGGAAGATCTATGATGTGCAGAACCCGTTTGATTGGATGGAGCTGATTAGTCTTCAGGGGAAGACTAATTTCTTTGAGAAGAGAGTTGGGGAGTACCAGAAGGCCTCAGTCATGAACAGCATTAGTGGAAATGGTGGCAACCATGTGTTCAAGATGGATGAGGATTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Frigida

Protein Analysis

329

Amino Acids

37.69

Weight (kDa)

4.85

Isoelectric Point (pI)

38.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ribonuc_red_sm PF00268 16 - 282 4.6e-114 Ribonucleotide reductase, small chain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 132, 402
AccIII TCCGGA 1 cut(s) 648
AciI CCGC 8 cut(s) 23, 120, 216, 253, 473, 555, 688, 695
AclWI GGATC 2 cut(s) 458, 515
AcoI YGGCCR 2 cut(s) 33, 250
AcuI CTGAAG 1 cut(s) 857
AcyI GRCGYC 1 cut(s) 107
AfaI GTAC 7 cut(s) 71, 92, 270, 338, 638, 776, 914
AfiI CCNNNNNNNGG 4 cut(s) 142, 172, 447, 694
AflIII ACRYGT 1 cut(s) 726
AgeI ACCGGT 1 cut(s) 45
AgsI TTSAA 1 cut(s) 970
AjiI CACGTC 1 cut(s) 199
AjnI CCWGG 1 cut(s) 141
AloI GAACNNNNNNTCC 2 cut(s) 311, 343
AluBI AGCT 3 cut(s) 525, 658, 862
AluI AGCT 3 cut(s) 525, 658, 862
Alw26I GTCTC 5 cut(s) 155, 280, 347, 392, 458
AlwI GGATC 2 cut(s) 458, 515
Ama87I CYCGRG 4 cut(s) 172, 236, 350, 517
Aor13HI TCCGGA 1 cut(s) 648
AoxI GGCC 9 cut(s) 33, 99, 250, 396, 429, 438, 486, 607, 921
ApaI GGGCCC 1 cut(s) 442
ApeKI GCWGC 1 cut(s) 25
AsiGI ACCGGT 1 cut(s) 45
Asp700I GAANNNNTTC 1 cut(s) 185
AspLEI GCGC 8 cut(s) 153, 286, 447, 480, 533, 555, 672, 740
AspS9I GGNCC 7 cut(s) 43, 117, 145, 396, 430, 438, 439
AsuC2I CCSGG 6 cut(s) 41, 74, 173, 174, 395, 567
AsuHPI GGTGA 3 cut(s) 184, 652, 770
AvaI CYCGRG 4 cut(s) 172, 236, 350, 517
AvaII GGWCC 3 cut(s) 43, 117, 145
BaeGI GKGCMC 1 cut(s) 442
BalI TGGCCA 1 cut(s) 35
BanII GRGCYC 1 cut(s) 442
BbsI GAAGAC 2 cut(s) 863, 887
BbvI GCAGC 1 cut(s) 12
BccI CCATC 2 cut(s) 850, 967
BceAI ACGGC 5 cut(s) 241, 313, 369, 383, 472
BcgI CGANNNNNNTGC 2 cut(s) 217, 251
BciT130I CCWGG 1 cut(s) 143
BciVI GTATCC 1 cut(s) 809
BcnI CCSGG 6 cut(s) 41, 74, 173, 174, 395, 567
BcoDI GTCTC 5 cut(s) 155, 280, 347, 392, 458
BfoI RGCGCY 1 cut(s) 154
BfuI GTATCC 1 cut(s) 809
BglI GCCNNNNNGGC 2 cut(s) 428, 437
BglII AGATCT 2 cut(s) 78, 825
BisI GCNGC 4 cut(s) 23, 26, 216, 253
BlsI GCNGC 4 cut(s) 24, 27, 217, 254
Bme1390I CCNGG 7 cut(s) 41, 74, 143, 173, 174, 395, 567
Bme18I GGWCC 3 cut(s) 43, 117, 145
BmeT110I CYCGRG 4 cut(s) 172, 236, 350, 517
BmgBI CACGTC 1 cut(s) 199
BmgT120I GGNCC 7 cut(s) 43, 117, 145, 396, 430, 438, 439
BmiI GGNNCC 2 cut(s) 440, 460
BmrFI CCNGG 7 cut(s) 41, 74, 143, 173, 174, 395, 567
BmrI ACTGGG 2 cut(s) 166, 427
BmsI GCATC 2 cut(s) 237, 489
BmuI ACTGGG 2 cut(s) 166, 427
BpiI GAAGAC 2 cut(s) 863, 887
BplI GAGNNNNNCTC 2 cut(s) 578, 610
BpuMI CCSGG 6 cut(s) 41, 74, 173, 174, 395, 567
BsaHI GRCGYC 1 cut(s) 107
BsaI GGTCTC 3 cut(s) 155, 280, 347
BsaJI CCNNGG 6 cut(s) 102, 123, 171, 172, 173, 663
BsaWI WCCGGW 2 cut(s) 45, 648
BsaXI ACNNNNNCTCC 2 cut(s) 311, 341
Bsc4I CCNNNNNNNGG 4 cut(s) 142, 172, 447, 694
Bse118I RCCGGY 2 cut(s) 45, 248
Bse1I ACTGG 3 cut(s) 161, 433, 772
BseAI TCCGGA 1 cut(s) 648
BseBI CCWGG 1 cut(s) 143
BseDI CCNNGG 6 cut(s) 102, 123, 171, 172, 173, 663
BseGI GGATG 3 cut(s) 321, 861, 982
BseLI CCNNNNNNNGG 4 cut(s) 142, 172, 447, 694
BseMII CTCAG 1 cut(s) 939
BseNI ACTGG 3 cut(s) 161, 433, 772
BseRI GAGGAG 3 cut(s) 140, 635, 680
BseSI GKGCMC 1 cut(s) 442
BseX3I CGGCCG 1 cut(s) 250
BseXI GCAGC 1 cut(s) 12
BsgI GTGCAG 1 cut(s) 857
Bsh1285I CGRYCG 1 cut(s) 253
BshFI GGCC 9 cut(s) 35, 101, 252, 398, 431, 440, 488, 609, 923
BshTI ACCGGT 1 cut(s) 45
BsiEI CGRYCG 1 cut(s) 253
BsiHKCI CYCGRG 4 cut(s) 172, 236, 350, 517
BsiSI CCGG 8 cut(s) 41, 46, 74, 173, 249, 394, 567, 649
BslI CCNNNNNNNGG 4 cut(s) 142, 172, 447, 694
BsmAI GTCTC 5 cut(s) 155, 280, 347, 392, 458
BsmBI CGTCTC 2 cut(s) 392, 458
BsnI GGCC 9 cut(s) 35, 101, 252, 398, 431, 440, 488, 609, 923
Bso31I GGTCTC 3 cut(s) 155, 280, 347
BsoBI CYCGRG 4 cut(s) 172, 236, 350, 517
Bsp120I GGGCCC 1 cut(s) 438
Bsp1286I GDGCHC 1 cut(s) 442
Bsp13I TCCGGA 1 cut(s) 648
Bsp1407I TGTACA 2 cut(s) 90, 336
Bsp143I GATC 7 cut(s) 78, 306, 450, 507, 591, 760, 825
Bsp68I TCGCGA 2 cut(s) 311, 598
BspACI CCGC 8 cut(s) 23, 120, 216, 253, 473, 555, 688, 695
BspANI GGCC 9 cut(s) 35, 101, 252, 398, 431, 440, 488, 609, 923
BspCNI CTCAG 1 cut(s) 938
BspEI TCCGGA 1 cut(s) 648
BspHI TCATGA 2 cut(s) 258, 930
BspLI GGNNCC 2 cut(s) 440, 460
BspPI GGATC 2 cut(s) 458, 515
BspQI GCTCTTC 2 cut(s) 12, 374
BspTNI GGTCTC 3 cut(s) 155, 280, 347
BsrFI RCCGGY 2 cut(s) 45, 248
BsrGI TGTACA 2 cut(s) 90, 336
BsrI ACTGG 3 cut(s) 161, 433, 772
BssAI RCCGGY 2 cut(s) 45, 248
BssECI CCNNGG 6 cut(s) 102, 123, 171, 172, 173, 663
BssMI GATC 7 cut(s) 78, 306, 450, 507, 591, 760, 825
BssNI GRCGYC 1 cut(s) 107
Bst2UI CCWGG 1 cut(s) 143
Bst4CI ACNGT 2 cut(s) 735, 758
Bst6I CTCTTC 4 cut(s) 12, 374, 395, 893
BstACI GRCGYC 1 cut(s) 107
BstAUI TGTACA 2 cut(s) 90, 336
BstC8I GCNNGC 6 cut(s) 6, 250, 288, 496, 628, 632
BstDEI CTNAG 2 cut(s) 742, 925
BstENI CCTNNNNNAGG 1 cut(s) 140
BstF5I GGATG 3 cut(s) 321, 861, 982
BstH2I RGCGCY 1 cut(s) 154
BstHHI GCGC 8 cut(s) 153, 286, 447, 480, 533, 555, 672, 740
BstKTI GATC 7 cut(s) 81, 309, 453, 510, 594, 763, 828
BstMAI GTCTC 5 cut(s) 155, 280, 347, 392, 458
BstMBI GATC 7 cut(s) 78, 306, 450, 507, 591, 760, 825
BstMCI CGRYCG 1 cut(s) 253
BstMWI GCNNNNNNNGC 6 cut(s) 212, 428, 437, 550, 615, 640
BstNI CCWGG 1 cut(s) 143
BstNSI RCATGY 1 cut(s) 58
BstSCI CCNGG 7 cut(s) 39, 72, 141, 171, 172, 393, 565
BstSLI GKGCMC 1 cut(s) 442
BstV1I GCAGC 1 cut(s) 12
BstV2I GAAGAC 2 cut(s) 863, 887
BstX2I RGATCY 3 cut(s) 78, 507, 825
BstYI RGATCY 3 cut(s) 78, 507, 825
BstZI CGGCCG 1 cut(s) 250
BsuI GTATCC 1 cut(s) 809
BsuRI GGCC 9 cut(s) 35, 101, 252, 398, 431, 440, 488, 609, 923
BtrI CACGTC 1 cut(s) 199
BtsCI GGATG 3 cut(s) 321, 861, 982
BtsI GCAGTG 1 cut(s) 613
BtsIMutI CAGTG 3 cut(s) 154, 440, 613
BtuMI TCGCGA 2 cut(s) 311, 598
Cac8I GCNNGC 6 cut(s) 6, 250, 288, 496, 628, 632
CciI TCATGA 2 cut(s) 258, 930
CfoI GCGC 8 cut(s) 153, 286, 447, 480, 533, 555, 672, 740
Cfr10I RCCGGY 2 cut(s) 45, 248
Cfr13I GGNCC 7 cut(s) 43, 117, 145, 396, 430, 438, 439
Cfr9I CCCGGG 1 cut(s) 172
CpoI CGGWCCG 1 cut(s) 43
CseI GACGC 4 cut(s) 96, 406, 701, 734
Csp6I GTAC 7 cut(s) 70, 91, 269, 337, 637, 775, 913
CspAI ACCGGT 1 cut(s) 45
CspI CGGWCCG 1 cut(s) 43
CviAII CATG 4 cut(s) 55, 259, 931, 962
CviQI GTAC 7 cut(s) 70, 91, 269, 337, 637, 775, 913
DdeI CTNAG 2 cut(s) 742, 925
DpnI GATC 7 cut(s) 80, 308, 452, 509, 593, 762, 827
DpnII GATC 7 cut(s) 78, 306, 450, 507, 591, 760, 825
EaeI YGGCCR 2 cut(s) 33, 250
EagI CGGCCG 1 cut(s) 250
Eam1104I CTCTTC 4 cut(s) 12, 374, 395, 893
EarI CTCTTC 4 cut(s) 12, 374, 395, 893
EclXI CGGCCG 1 cut(s) 250
Eco147I AGGCCT 2 cut(s) 609, 923
Eco24I GRGCYC 1 cut(s) 442
Eco31I GGTCTC 3 cut(s) 155, 280, 347
Eco47I GGWCC 3 cut(s) 43, 117, 145
Eco52I CGGCCG 1 cut(s) 250
Eco57I CTGAAG 1 cut(s) 857
Eco88I CYCGRG 4 cut(s) 172, 236, 350, 517
EcoNI CCTNNNNNAGG 1 cut(s) 140
EcoO109I RGGNCCY 1 cut(s) 439
EcoRII CCWGG 1 cut(s) 141
EcoT38I GRGCYC 1 cut(s) 442
Esp3I CGTCTC 2 cut(s) 392, 458
FaeI CATG 4 cut(s) 58, 262, 934, 965
FaiI YATR 5 cut(s) 56, 260, 831, 932, 963
FatI CATG 4 cut(s) 54, 258, 930, 961
FauI CCCGC 1 cut(s) 548
FblI GTMKAC 2 cut(s) 132, 402
Fnu4HI GCNGC 4 cut(s) 23, 26, 216, 253
FokI GGATG 2 cut(s) 308, 868
FriOI GRGCYC 1 cut(s) 442
Fsp4HI GCNGC 4 cut(s) 23, 26, 216, 253
GlaI GCGC 8 cut(s) 152, 285, 446, 479, 532, 554, 671, 739
GluI GCNGC 4 cut(s) 23, 26, 216, 253
HaeII RGCGCY 1 cut(s) 154
HaeIII GGCC 9 cut(s) 35, 101, 252, 398, 431, 440, 488, 609, 923
HapII CCGG 8 cut(s) 41, 46, 74, 173, 249, 394, 567, 649
HgaI GACGC 4 cut(s) 96, 406, 701, 734
HhaI GCGC 8 cut(s) 153, 286, 447, 480, 533, 555, 672, 740
Hin1I GRCGYC 1 cut(s) 107
Hin1II CATG 4 cut(s) 58, 262, 934, 965
Hin6I GCGC 8 cut(s) 151, 284, 445, 478, 531, 553, 670, 738
HinP1I GCGC 8 cut(s) 151, 284, 445, 478, 531, 553, 670, 738
HincII GTYRAC 2 cut(s) 133, 403
HindII GTYRAC 2 cut(s) 133, 403
HinfI GANTC 2 cut(s) 241, 368
HpaII CCGG 8 cut(s) 41, 46, 74, 173, 249, 394, 567, 649
HphI GGTGA 3 cut(s) 184, 652, 770
Hpy166II GTNNAC 2 cut(s) 133, 403
Hpy188I TCNGA 7 cut(s) 223, 280, 331, 373, 463, 573, 765
Hpy8I GTNNAC 2 cut(s) 133, 403
Hpy99I CGWCG 7 cut(s) 112, 227, 404, 422, 458, 695, 728
HpyAV CCTTC 9 cut(s) 91, 217, 256, 301, 353, 421, 586, 599, 913
HpyCH4III ACNGT 2 cut(s) 735, 758
HpyCH4IV ACGT 2 cut(s) 198, 467
HpyCH4V TGCA 3 cut(s) 8, 54, 838
HpyF10VI GCNNNNNNNGC 6 cut(s) 212, 428, 437, 550, 615, 640
HpyF3I CTNAG 2 cut(s) 742, 925
HpySE526I ACGT 2 cut(s) 198, 467
Hsp92I GRCGYC 1 cut(s) 107
Hsp92II CATG 4 cut(s) 58, 262, 934, 965
HspAI GCGC 8 cut(s) 151, 284, 445, 478, 531, 553, 670, 738
Kpn2I TCCGGA 1 cut(s) 648
KroI GCCGGC 1 cut(s) 248
KroNI GCCGGC 1 cut(s) 250
Kzo9I GATC 7 cut(s) 78, 306, 450, 507, 591, 760, 825
LguI GCTCTTC 2 cut(s) 12, 374
LmnI GCTCC 6 cut(s) 464, 475, 522, 648, 667, 859
Lsp1109I GCAGC 1 cut(s) 12
LweI GCATC 2 cut(s) 237, 489
MaeII ACGT 2 cut(s) 198, 467
MaeIII GTNAC 1 cut(s) 729
MalI GATC 7 cut(s) 80, 308, 452, 509, 593, 762, 827
MboI GATC 7 cut(s) 78, 306, 450, 507, 591, 760, 825
MflI RGATCY 3 cut(s) 78, 507, 825
MhlI GDGCHC 1 cut(s) 442
MlsI TGGCCA 1 cut(s) 35
MluCI AATT 2 cut(s) 9, 886
MluI ACGCGT 1 cut(s) 726
MluNI TGGCCA 1 cut(s) 35
MlyI GAGTC 1 cut(s) 362
MmeI TCCRAC 1 cut(s) 246
Mox20I TGGCCA 1 cut(s) 35
MroI TCCGGA 1 cut(s) 648
MroNI GCCGGC 1 cut(s) 248
MroXI GAANNNNTTC 1 cut(s) 185
MscI TGGCCA 1 cut(s) 35
MseI TTAA 1 cut(s) 560
Msp20I TGGCCA 1 cut(s) 35
MspA1I CMGCKG 1 cut(s) 25
MspI CCGG 8 cut(s) 41, 46, 74, 173, 249, 394, 567, 649
MspR9I CCNGG 7 cut(s) 41, 74, 143, 173, 174, 395, 567
MvaI CCWGG 1 cut(s) 143
MwoI GCNNNNNNNGC 6 cut(s) 212, 428, 437, 550, 615, 640
NaeI GCCGGC 1 cut(s) 250
NciI CCSGG 6 cut(s) 41, 74, 173, 174, 395, 567
NdeII GATC 7 cut(s) 78, 306, 450, 507, 591, 760, 825
NgoMIV GCCGGC 1 cut(s) 248
NlaIII CATG 4 cut(s) 58, 262, 934, 965
NlaIV GGNNCC 2 cut(s) 440, 460
NmeAIII GCCGAG 2 cut(s) 127, 148
NruI TCGCGA 2 cut(s) 311, 598
NspI RCATGY 1 cut(s) 58
PaeR7I CTCGAG 2 cut(s) 236, 350
PagI TCATGA 2 cut(s) 258, 930
PceI AGGCCT 2 cut(s) 609, 923
PciSI GCTCTTC 2 cut(s) 12, 374
PcsI WCGNNNNNNNCGW 2 cut(s) 219, 459
PdiI GCCGGC 1 cut(s) 250
PdmI GAANNNNTTC 1 cut(s) 185
PfeI GAWTC 1 cut(s) 241
PinAI ACCGGT 1 cut(s) 45
PkrI GCNGC 4 cut(s) 24, 27, 217, 254
PleI GAGTC 1 cut(s) 362
PpsI GAGTC 1 cut(s) 362
Psp6I CCWGG 1 cut(s) 141
PspGI CCWGG 1 cut(s) 141
PspN4I GGNNCC 2 cut(s) 440, 460
PspOMI GGGCCC 1 cut(s) 438
PspPI GGNCC 7 cut(s) 43, 117, 145, 396, 430, 438, 439
PsrI GAACNNNNNNTAC 2 cut(s) 767, 799
PsuI RGATCY 3 cut(s) 78, 507, 825
RruI TCGCGA 2 cut(s) 311, 598
RsaI GTAC 7 cut(s) 71, 92, 270, 338, 638, 776, 914
RsaNI GTAC 7 cut(s) 70, 91, 269, 337, 637, 775, 913
Rsr2I CGGWCCG 1 cut(s) 43
RsrII CGGWCCG 1 cut(s) 43
SalI GTCGAC 2 cut(s) 131, 401
SapI GCTCTTC 2 cut(s) 12, 374
SaqAI TTAA 1 cut(s) 560
SatI GCNGC 4 cut(s) 23, 26, 216, 253
Sau3AI GATC 7 cut(s) 78, 306, 450, 507, 591, 760, 825
Sau96I GGNCC 7 cut(s) 43, 117, 145, 396, 430, 438, 439
SchI GAGTC 1 cut(s) 362
ScrFI CCNGG 7 cut(s) 41, 74, 143, 173, 174, 395, 567
SduI GDGCHC 1 cut(s) 442
SfaNI GCATC 2 cut(s) 237, 489
SfiI GGCCNNNNNGGCC 1 cut(s) 437
Sfr274I CTCGAG 2 cut(s) 236, 350
SinI GGWCC 3 cut(s) 43, 117, 145
SlaI CTCGAG 2 cut(s) 236, 350
SmaI CCCGGG 1 cut(s) 174
SmlI CTYRAG 2 cut(s) 236, 350
SmoI CTYRAG 2 cut(s) 236, 350
Sse9I AATT 2 cut(s) 9, 886
SseBI AGGCCT 2 cut(s) 609, 923
SsiI CCGC 8 cut(s) 23, 120, 216, 253, 473, 555, 688, 695
StuI AGGCCT 2 cut(s) 609, 923
StyD4I CCNGG 7 cut(s) 39, 72, 141, 171, 172, 393, 565
TaaI ACNGT 2 cut(s) 735, 758
TaiI ACGT 2 cut(s) 201, 470
TaqI TCGA 8 cut(s) 132, 138, 237, 351, 402, 453, 581, 780
TasI AATT 2 cut(s) 9, 886
TatI WGTACW 4 cut(s) 90, 336, 636, 774
TauI GCSGC 3 cut(s) 25, 218, 255
TfiI GAWTC 1 cut(s) 241
Tru1I TTAA 1 cut(s) 560
Tru9I TTAA 1 cut(s) 560
TscAI CASTG 3 cut(s) 161, 440, 620
TseI GCWGC 1 cut(s) 25
TspDTI ATGAA 6 cut(s) 178, 247, 275, 618, 767, 947
TspMI CCCGGG 1 cut(s) 172
TspRI CASTG 3 cut(s) 161, 440, 620
VpaK11BI GGWCC 3 cut(s) 43, 117, 145
XagI CCTNNNNNAGG 1 cut(s) 140
XceI RCATGY 1 cut(s) 58
XhoI CTCGAG 2 cut(s) 236, 350
XmaI CCCGGG 1 cut(s) 172
XmiI GTMKAC 2 cut(s) 132, 402
XmnI GAANNNNTTC 1 cut(s) 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.