Rw4G013980

FRIGIDA-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000126
Physical Location & Seq
Reverse (-)
32691592 .. 32695456
3865 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G013980.1

Sequence Viewer

Length: 2217 bp
ATGGAGGCAAGCCTGACTCTCAGAGTGAAAACACAAAGAACATTGGTCAAATGTGTAATTACGACAGTCCACGCTGTAAAAAAAACTTGGGCACGTGGCAACATCTGTAGCTTTGCGGCCCCACTAGACTTGACTCTCCCCCTGTTGATTCACAAAACTCTTTCGGCTTCTCCGTTCACACCTCCACCACCACACCTCTGCCAATTTAGGGTTTCCCTTTCGTTCAACAAATCTTCCCCCACACGGTCCGTACAGAAAAAAAAGGAGATGATGGCGTCGGAGTTGAGACAATTGGAGGAGCAGAGGTTGCAAGAGCAACAAGAAACGTCGTCAACCCTGCTTCGGTTGATTAAACGCATGAAGAACATGGAGGAGAAGTTTCGGTCGACCCGAAATTCTGCCCAGGTCCGATGTCAAGAGTTGGAGGATCGGGAGAGGCGAGTCGGAGATGAGACGAGCAAACTGGACGTGTTGAAGGCCGAGACGGAGAACAAAGCTGTGGAGCTTCGAAGCCTTGAGAAGCTGATCCAGGAGAGACAAGAAGAAGCTGTAAAAGGTGAGAGTCACTTAGACTCGCTCAAGTTGTTAATCCAAGAACATGTAGAAGAACTGGAATTTAAAGAGAAGCGGTTCTCGGATCTTGATAGAATGATTGGTGTGAAGATGGGAGAGTGTGAGTCGGTTCAGAAGAGAATGAGGGAGAGCTTGGAGAAACTGAATAGGGTTGAGAAGGAAATAGAAGAGAAGATTCAATTGAAACAAAAGTTAAGTAGGGCAATGGAGGTGAAAGGGAAGGTGTTTTGTTTGCATAAGACATCAATGAAGGAGTGGTCGAGAAAGCTTGAAGTAAAAGGGAGGGAACTTGAAGAATTGTCTGAGAAGATTGAGTTGAAAGAAAAACAATTTGAACCGAAAGTGGAGGAGATTCGATTGATTGAAAAAAGGGTAAATGAATGCCTGAATGAGATTGAATTGAAAGAAAGGCATCTTCAGTCACTCAAAAAATCAATTCAAGAGCGTGAAAATTCGTTAGAAGAACGCGAAAAGCACTTAGATTCAATCTCTCATGGACTTGAAATGAGAGAGAAGGAACTTGATCTAAAGGCCAAAGAACTTGAACCGAAGCAATATGTACCGGCACCAGCAAGTAATGCCATTTCTTCCCTTATCGAAGTTGGAGAACCAGAATCTTTACTAGCCAAAAAAGTAGCTGTTTCATCTTCTTCAAATCCTCAATTAAGTGATTCCTTAAATGCAAGGAATTTGCATGGACAAACCCTGCAAACTTGTGTTGGATTGGATGCAAACTTTCTCTCACAATATTGGACAAAAGGTGATGTTGGTTTTGAGGTAACTTCCATCAAAACCTACATTTCCCTATTAGAGCAGCTACTGAGATTCTCACCACATGCTGGAGCTCAGGTGAAAGGGGATGCAATGAAGTTGGCAGTCCAGTGGAAAGCAAATATGAGAGCTGATACAGAGAATTCCTTGGAAATTTTGGGATTTTTGCACTTCCTAGCTACATTTGGGTTGCTATATACTCTGAATGTAGATGAAATTGTAAAGCTTCTTGGGATGATTTCTCAGCATAAAGAGGCTCTAGAATTATGTCAGACACTTGATTTTGCAGATGAAATCCCTGAGTTTATCGGGACTCTTGTTGAAAGGAAGCAGCTGATGGAAGCCGTTGGACTGATTTTTACCTTTAAGTTAAGTGACAAGTTTCCTCCCGGACCACTCCTAAAAGAATACATGGAGGAACAAATAAAGTGTTGCAGAAATGCTTACAAGAGAACCAAGTTACATAACGAAAAGGTTAGGATTGTGGACGACCAGATAACTCGTCTAAGAGCTGCGATTAACATGATCAAAAACCACAATCTGGAGTCGACGGAGTGTGCATCAACAATCATTGAAATTCAAATAACTCGACTGCAGCAAGTAAAGGAGAACTGGAGACTTCAAGCGGCGAATTTGGCAACTGTGCCAAAAAGAGGAACCAAACGTAGTAGCAGCACTCTTCCTACTGCGTTTGAACCCCGACAGCAGCTCAATAAAGTTCATCGGAAAGCTGTAGCGGTTCCTCAGCCTTCTGCATTGCGAATTTACACCCCGATCTCTCCGCAGTCAGATCTTTCATCTGTGCTGTTACATAAGGGGCAGTCTGGCGCCGCTCAGAACACTGGTATACACTACCCTCACTCTGGTACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Frigida

Protein Analysis

738

Amino Acids

84.46

Weight (kDa)

8.9

Isoelectric Point (pI)

50.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 453 - 652 6.4e-42 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1138, 2171
AccB7I CCANNNNNTGG 2 cut(s) 1412, 1885
AccBSI CCGCTC 1 cut(s) 2177
AccI GTMKAC 3 cut(s) 386, 1892, 2191
AccII CGCG 1 cut(s) 1041
AciI CCGC 6 cut(s) 116, 628, 1970, 2081, 2126, 2175
AclWI GGATC 3 cut(s) 435, 520, 645
AcsI RAATTY 9 cut(s) 394, 614, 1024, 1261, 1486, 1497, 1920, 1975, 2106
AcuI CTGAAG 1 cut(s) 974
AcvI CACGTG 1 cut(s) 95
AcyI GRCGYC 2 cut(s) 275, 2172
AfaI GTAC 3 cut(s) 252, 1134, 2212
AfiI CCNNNNNNNGG 7 cut(s) 208, 243, 342, 1412, 1885, 1997, 2207
AflIII ACRYGT 2 cut(s) 468, 598
AjiI CACGTC 1 cut(s) 469
AjnI CCWGG 2 cut(s) 402, 528
Alw21I GWGCWC 1 cut(s) 1420
Alw26I GTCTC 5 cut(s) 280, 446, 476, 529, 1954
AlwI GGATC 3 cut(s) 435, 520, 645
AlwNI CAGNNNCTG 1 cut(s) 1393
AoxI GGCC 3 cut(s) 117, 477, 1104
ApeKI GCWGC 6 cut(s) 1387, 1675, 1856, 1939, 2016, 2050
ApoI RAATTY 9 cut(s) 394, 614, 1024, 1261, 1486, 1497, 1920, 1975, 2106
Asp700I GAANNNNTTC 1 cut(s) 629
AspLEI GCGC 1 cut(s) 2174
AspS9I GGNCC 4 cut(s) 118, 246, 406, 1736
AsuC2I CCSGG 1 cut(s) 1734
AsuHPI GGTGA 5 cut(s) 569, 796, 1346, 1395, 1435
AsuII TTCGAA 1 cut(s) 508
AvaII GGWCC 3 cut(s) 246, 406, 1736
BaeGI GKGCMC 1 cut(s) 94
BanI GGYRCC 2 cut(s) 1138, 2171
BanII GRGCYC 1 cut(s) 1420
BbrPI CACGTG 1 cut(s) 95
Bbv12I GWGCWC 1 cut(s) 1420
BbvCI CCTCAGC 1 cut(s) 2088
BbvI GCAGC 6 cut(s) 1399, 1687, 1843, 1951, 2028, 2062
BccI CCATC 4 cut(s) 265, 658, 1367, 1675
BceAI ACGGC 1 cut(s) 1673
BciT130I CCWGG 2 cut(s) 404, 530
BclI TGATCA 1 cut(s) 1869
BcnI CCSGG 1 cut(s) 1734
BcoDI GTCTC 5 cut(s) 280, 446, 476, 529, 1954
BfaI CTAG 4 cut(s) 125, 1196, 1520, 1604
BfmI CTRYAG 3 cut(s) 106, 1937, 2076
BfoI RGCGCY 1 cut(s) 2175
BglII AGATCT 1 cut(s) 2134
BisI GCNGC 9 cut(s) 117, 1388, 1676, 1857, 1940, 1971, 2017, 2051, 2175
BlsI GCNGC 9 cut(s) 118, 1389, 1677, 1858, 1941, 1972, 2018, 2052, 2176
Bme1390I CCNGG 3 cut(s) 404, 530, 1734
Bme18I GGWCC 3 cut(s) 246, 406, 1736
BmgBI CACGTC 1 cut(s) 469
BmgT120I GGNCC 4 cut(s) 118, 246, 406, 1736
BmiI GGNNCC 5 cut(s) 120, 1140, 2002, 2085, 2173
BmrFI CCNGG 3 cut(s) 404, 530, 1734
BmsI GCATC 4 cut(s) 994, 1291, 1423, 1913
BpmI CTGGAG 3 cut(s) 1434, 1907, 1978
Bpu10I CCTNAGC 2 cut(s) 1419, 2088
Bpu14I TTCGAA 1 cut(s) 508
BpuEI CTTGAG 2 cut(s) 536, 563
BpuMI CCSGG 1 cut(s) 1734
BsaAI YACGTR 1 cut(s) 95
BsaHI GRCGYC 2 cut(s) 275, 2172
BsaJI CCNNGG 2 cut(s) 402, 1491
BsaXI ACNNNNNCTCC 6 cut(s) 290, 320, 362, 392, 1407, 1437
Bsc4I CCNNNNNNNGG 7 cut(s) 208, 243, 342, 1412, 1885, 1997, 2207
Bse118I RCCGGY 1 cut(s) 1135
Bse1I ACTGG 5 cut(s) 468, 615, 1453, 1961, 2191
Bse3DI GCAATG 3 cut(s) 783, 1443, 2099
BseBI CCWGG 2 cut(s) 404, 530
BseDI CCNNGG 2 cut(s) 402, 1491
BseGI GGATG 3 cut(s) 1306, 1438, 1584
BseLI CCNNNNNNNGG 7 cut(s) 208, 243, 342, 1412, 1885, 1997, 2207
BseMI GCAATG 3 cut(s) 783, 1443, 2099
BseMII CTCAG 8 cut(s) 34, 867, 1385, 1433, 1601, 1635, 2102, 2192
BseNI ACTGG 5 cut(s) 468, 615, 1453, 1961, 2191
BseRI GAGGAG 3 cut(s) 311, 386, 935
BseSI GKGCMC 1 cut(s) 94
BseXI GCAGC 6 cut(s) 1399, 1687, 1843, 1951, 2028, 2062
Bsh1236I CGCG 1 cut(s) 1041
Bsh1285I CGRYCG 1 cut(s) 386
BshFI GGCC 3 cut(s) 119, 479, 1106
BshNI GGYRCC 2 cut(s) 1138, 2171
BsiEI CGRYCG 1 cut(s) 386
BsiHKAI GWGCWC 1 cut(s) 1420
BsiSI CCGG 2 cut(s) 1136, 1734
BslFI GGGAC 1 cut(s) 1669
BslI CCNNNNNNNGG 7 cut(s) 208, 243, 342, 1412, 1885, 1997, 2207
BsmAI GTCTC 5 cut(s) 280, 446, 476, 529, 1954
BsmBI CGTCTC 2 cut(s) 446, 476
BsmFI GGGAC 1 cut(s) 1669
BsmI GAATGC 1 cut(s) 959
BsnI GGCC 3 cut(s) 119, 479, 1106
Bsp119I TTCGAA 1 cut(s) 508
Bsp1286I GDGCHC 2 cut(s) 94, 1420
Bsp143I GATC 7 cut(s) 427, 525, 637, 1096, 1869, 2118, 2134
BspACI CCGC 6 cut(s) 116, 628, 1970, 2081, 2126, 2175
BspANI GGCC 3 cut(s) 119, 479, 1106
BspCNI CTCAG 8 cut(s) 33, 868, 1386, 1432, 1600, 1636, 2101, 2191
BspFNI CGCG 1 cut(s) 1041
BspLI GGNNCC 5 cut(s) 120, 1140, 2002, 2085, 2173
BspMAI CTGCAG 1 cut(s) 1941
BspPI GGATC 3 cut(s) 435, 520, 645
BspT104I TTCGAA 1 cut(s) 508
BspT107I GGYRCC 2 cut(s) 1138, 2171
BsrBI CCGCTC 1 cut(s) 2177
BsrDI GCAATG 3 cut(s) 783, 1443, 2099
BsrFI RCCGGY 1 cut(s) 1135
BsrI ACTGG 5 cut(s) 468, 615, 1453, 1961, 2191
BssAI RCCGGY 1 cut(s) 1135
BssECI CCNNGG 2 cut(s) 402, 1491
BssMI GATC 7 cut(s) 427, 525, 637, 1096, 1869, 2118, 2134
BssNAI GTATAC 1 cut(s) 2192
BssNI GRCGYC 2 cut(s) 275, 2172
BssT1I CCWWGG 1 cut(s) 1491
Bst1107I GTATAC 1 cut(s) 2192
Bst2UI CCWGG 2 cut(s) 404, 530
Bst4CI ACNGT 3 cut(s) 67, 246, 1987
Bst6I CTCTTC 3 cut(s) 683, 735, 2028
BstACI GRCGYC 2 cut(s) 275, 2172
BstAPI GCANNNNNTGC 2 cut(s) 307, 1151
BstBAI YACGTR 1 cut(s) 95
BstBI TTCGAA 1 cut(s) 508
BstC8I GCNNGC 1 cut(s) 10
BstF5I GGATG 3 cut(s) 1306, 1438, 1584
BstFNI CGCG 1 cut(s) 1041
BstH2I RGCGCY 1 cut(s) 2175
BstHHI GCGC 1 cut(s) 2174
BstKTI GATC 7 cut(s) 430, 528, 640, 1099, 1872, 2121, 2137
BstMAI GTCTC 5 cut(s) 280, 446, 476, 529, 1954
BstMBI GATC 7 cut(s) 427, 525, 637, 1096, 1869, 2118, 2134
BstMCI CGRYCG 1 cut(s) 386
BstMWI GCNNNNNNNGC 3 cut(s) 307, 1151, 1979
BstNI CCWGG 2 cut(s) 404, 530
BstNSI RCATGY 2 cut(s) 602, 1412
BstSCI CCNGG 3 cut(s) 402, 528, 1732
BstSFI CTRYAG 3 cut(s) 106, 1937, 2076
BstSLI GKGCMC 1 cut(s) 94
BstUI CGCG 1 cut(s) 1041
BstV1I GCAGC 6 cut(s) 1399, 1687, 1843, 1951, 2028, 2062
BstX2I RGATCY 2 cut(s) 637, 2134
BstYI RGATCY 2 cut(s) 637, 2134
BstZ17I GTATAC 1 cut(s) 2192
BsuRI GGCC 3 cut(s) 119, 479, 1106
BtrI CACGTC 1 cut(s) 469
BtsCI GGATG 3 cut(s) 1306, 1438, 1584
BtsIMutI CAGTG 2 cut(s) 1460, 2184
Cac8I GCNNGC 1 cut(s) 10
CaiI CAGNNNCTG 1 cut(s) 1393
CfoI GCGC 1 cut(s) 2174
Cfr10I RCCGGY 1 cut(s) 1135
Cfr13I GGNCC 4 cut(s) 118, 246, 406, 1736
CpoI CGGWCCG 1 cut(s) 246
CseI GACGC 1 cut(s) 264
Csp6I GTAC 3 cut(s) 251, 1133, 2211
CspCI CAANNNNNGTGG 2 cut(s) 111, 146
CspI CGGWCCG 1 cut(s) 246
CviAII CATG 8 cut(s) 358, 367, 599, 1067, 1268, 1409, 1756, 1867
CviQI GTAC 3 cut(s) 251, 1133, 2211
DinI GGCGCC 1 cut(s) 2173
DpnI GATC 7 cut(s) 429, 527, 639, 1098, 1871, 2120, 2136
DpnII GATC 7 cut(s) 427, 525, 637, 1096, 1869, 2118, 2134
DraI TTTAAA 1 cut(s) 619
Eam1104I CTCTTC 3 cut(s) 683, 735, 2028
EarI CTCTTC 3 cut(s) 683, 735, 2028
Ecl136II GAGCTC 1 cut(s) 1418
Eco130I CCWWGG 1 cut(s) 1491
Eco24I GRGCYC 1 cut(s) 1420
Eco47I GGWCC 3 cut(s) 246, 406, 1736
Eco53kI GAGCTC 1 cut(s) 1418
Eco57I CTGAAG 1 cut(s) 974
Eco72I CACGTG 1 cut(s) 95
EcoICRI GAGCTC 1 cut(s) 1418
EcoRI GAATTC 1 cut(s) 1486
EcoRII CCWGG 2 cut(s) 402, 528
EcoT14I CCWWGG 1 cut(s) 1491
EcoT38I GRGCYC 1 cut(s) 1420
EgeI GGCGCC 1 cut(s) 2173
EheI GGCGCC 1 cut(s) 2173
ErhI CCWWGG 1 cut(s) 1491
Esp3I CGTCTC 2 cut(s) 446, 476
FaeI CATG 8 cut(s) 361, 370, 602, 1070, 1271, 1412, 1759, 1870
FaqI GGGAC 1 cut(s) 1669
FatI CATG 8 cut(s) 357, 366, 598, 1066, 1267, 1408, 1755, 1866
FbaI TGATCA 1 cut(s) 1869
FblI GTMKAC 3 cut(s) 386, 1892, 2191
Fnu4HI GCNGC 9 cut(s) 117, 1388, 1676, 1857, 1940, 1971, 2017, 2051, 2175
FokI GGATG 3 cut(s) 1313, 1445, 1591
FriOI GRGCYC 1 cut(s) 1420
Fsp4HI GCNGC 9 cut(s) 117, 1388, 1676, 1857, 1940, 1971, 2017, 2051, 2175
FspBI CTAG 4 cut(s) 125, 1196, 1520, 1604
GlaI GCGC 1 cut(s) 2173
GluI GCNGC 9 cut(s) 117, 1388, 1676, 1857, 1940, 1971, 2017, 2051, 2175
GsuI CTGGAG 3 cut(s) 1434, 1907, 1978
HaeII RGCGCY 1 cut(s) 2175
HaeIII GGCC 3 cut(s) 119, 479, 1106
HapII CCGG 2 cut(s) 1136, 1734
HgaI GACGC 1 cut(s) 264
HhaI GCGC 1 cut(s) 2174
Hin1I GRCGYC 2 cut(s) 275, 2172
Hin1II CATG 8 cut(s) 361, 370, 602, 1070, 1271, 1412, 1759, 1870
Hin6I GCGC 1 cut(s) 2172
HinP1I GCGC 1 cut(s) 2172
HincII GTYRAC 3 cut(s) 333, 387, 1893
HindII GTYRAC 3 cut(s) 333, 387, 1893
HindIII AAGCTT 2 cut(s) 839, 1568
HpaII CCGG 2 cut(s) 1136, 1734
HphI GGTGA 5 cut(s) 569, 796, 1346, 1395, 1435
Hpy166II GTNNAC 7 cut(s) 70, 177, 333, 387, 1831, 1893, 2192
Hpy188III TCNNGA 8 cut(s) 416, 431, 641, 834, 1013, 1604, 1654, 1886
Hpy8I GTNNAC 7 cut(s) 70, 177, 333, 387, 1831, 1893, 2192
Hpy99I CGWCG 3 cut(s) 280, 331, 1897
HpyAV CCTTC 6 cut(s) 469, 724, 787, 817, 1081, 2103
HpyCH4III ACNGT 3 cut(s) 67, 246, 1987
HpyCH4IV ACGT 4 cut(s) 94, 326, 468, 2008
HpyF10VI GCNNNNNNNGC 3 cut(s) 307, 1151, 1979
HpySE526I ACGT 4 cut(s) 94, 326, 468, 2008
Hsp92I GRCGYC 2 cut(s) 275, 2172
Hsp92II CATG 8 cut(s) 361, 370, 602, 1070, 1271, 1412, 1759, 1870
HspAI GCGC 1 cut(s) 2172
KasI GGCGCC 1 cut(s) 2171
Ksp22I TGATCA 1 cut(s) 1869
Kzo9I GATC 7 cut(s) 427, 525, 637, 1096, 1869, 2118, 2134
LmnI GCTCC 3 cut(s) 298, 502, 1415
Lsp1109I GCAGC 6 cut(s) 1399, 1687, 1843, 1951, 2028, 2062
LweI GCATC 4 cut(s) 994, 1291, 1423, 1913
MaeI CTAG 4 cut(s) 125, 1196, 1520, 1604
MaeII ACGT 4 cut(s) 94, 326, 468, 2008
MaeIII GTNAC 6 cut(s) 563, 993, 1351, 1718, 1803, 2151
MalI GATC 7 cut(s) 429, 527, 639, 1098, 1871, 2120, 2136
MbiI CCGCTC 1 cut(s) 2177
MboI GATC 7 cut(s) 427, 525, 637, 1096, 1869, 2118, 2134
MfeI CAATTG 2 cut(s) 290, 752
MflI RGATCY 2 cut(s) 637, 2134
MhlI GDGCHC 2 cut(s) 94, 1420
Mly113I GGCGCC 1 cut(s) 2172
MlyI GAGTC 8 cut(s) 10, 127, 450, 566, 571, 686, 1651, 1898
MmeI TCCRAC 6 cut(s) 258, 402, 424, 1156, 1273, 1672
MroXI GAANNNNTTC 1 cut(s) 629
MseI TTAA 9 cut(s) 351, 587, 618, 767, 1238, 1250, 1710, 1715, 1863
MspA1I CMGCKG 1 cut(s) 1678
MspI CCGG 2 cut(s) 1136, 1734
MspR9I CCNGG 3 cut(s) 404, 530, 1734
MunI CAATTG 2 cut(s) 290, 752
Mva1269I GAATGC 1 cut(s) 959
MvaI CCWGG 2 cut(s) 404, 530
MvnI CGCG 1 cut(s) 1041
MwoI GCNNNNNNNGC 3 cut(s) 307, 1151, 1979
NarI GGCGCC 1 cut(s) 2172
NciI CCSGG 1 cut(s) 1734
NdeII GATC 7 cut(s) 427, 525, 637, 1096, 1869, 2118, 2134
NlaIII CATG 8 cut(s) 361, 370, 602, 1070, 1271, 1412, 1759, 1870
NlaIV GGNNCC 5 cut(s) 120, 1140, 2002, 2085, 2173
NmeAIII GCCGAG 1 cut(s) 505
NmuCI GTSAC 3 cut(s) 563, 993, 1718
NspI RCATGY 2 cut(s) 602, 1412
NspV TTCGAA 1 cut(s) 508
PciI ACATGT 1 cut(s) 598
PcsI WCGNNNNNNNCGW 3 cut(s) 170, 388, 436
PctI GAATGC 1 cut(s) 959
PdmI GAANNNNTTC 1 cut(s) 629
PfeI GAWTC 7 cut(s) 148, 748, 925, 1055, 1187, 1244, 1398
PflMI CCANNNNNTGG 2 cut(s) 1412, 1885
PfoI TCCNGGA 2 cut(s) 528, 1732
PkrI GCNGC 9 cut(s) 118, 1389, 1677, 1858, 1941, 1972, 2018, 2052, 2176
PleI GAGTC 8 cut(s) 10, 127, 449, 566, 570, 685, 1651, 1897
PluTI GGCGCC 1 cut(s) 2175
PmaCI CACGTG 1 cut(s) 95
PmlI CACGTG 1 cut(s) 95
PpsI GAGTC 8 cut(s) 10, 127, 449, 566, 570, 685, 1651, 1897
Ppu21I YACGTR 1 cut(s) 95
PscI ACATGT 1 cut(s) 598
Psp124BI GAGCTC 1 cut(s) 1420
Psp6I CCWGG 2 cut(s) 402, 528
PspCI CACGTG 1 cut(s) 95
PspGI CCWGG 2 cut(s) 402, 528
PspN4I GGNNCC 5 cut(s) 120, 1140, 2002, 2085, 2173
PspPI GGNCC 4 cut(s) 118, 246, 406, 1736
PstI CTGCAG 1 cut(s) 1941
PstNI CAGNNNCTG 1 cut(s) 1393
PsuI RGATCY 2 cut(s) 637, 2134
PvuII CAGCTG 1 cut(s) 1678
RsaI GTAC 3 cut(s) 252, 1134, 2212
RsaNI GTAC 3 cut(s) 251, 1133, 2211
Rsr2I CGGWCCG 1 cut(s) 246
RsrII CGGWCCG 1 cut(s) 246
SacI GAGCTC 1 cut(s) 1420
SalI GTCGAC 2 cut(s) 385, 1891
SaqAI TTAA 9 cut(s) 351, 587, 618, 767, 1238, 1250, 1710, 1715, 1863
SatI GCNGC 9 cut(s) 117, 1388, 1676, 1857, 1940, 1971, 2017, 2051, 2175
Sau3AI GATC 7 cut(s) 427, 525, 637, 1096, 1869, 2118, 2134
Sau96I GGNCC 4 cut(s) 118, 246, 406, 1736
SchI GAGTC 8 cut(s) 10, 127, 450, 566, 571, 686, 1651, 1898
ScrFI CCNGG 3 cut(s) 404, 530, 1734
SduI GDGCHC 2 cut(s) 94, 1420
SfaNI GCATC 4 cut(s) 994, 1291, 1423, 1913
SfcI CTRYAG 3 cut(s) 106, 1937, 2076
SfoI GGCGCC 1 cut(s) 2173
SfuI TTCGAA 1 cut(s) 508
SinI GGWCC 3 cut(s) 246, 406, 1736
SmlI CTYRAG 2 cut(s) 515, 578
SmoI CTYRAG 2 cut(s) 515, 578
SsiI CCGC 6 cut(s) 116, 628, 1970, 2081, 2126, 2175
SspDI GGCGCC 1 cut(s) 2171
SspI AATATT 1 cut(s) 1322
SspMI CTAG 4 cut(s) 125, 1196, 1520, 1604
SstI GAGCTC 1 cut(s) 1420
StyD4I CCNGG 3 cut(s) 402, 528, 1732
StyI CCWWGG 1 cut(s) 1491
TaaI ACNGT 3 cut(s) 67, 246, 1987
TaiI ACGT 4 cut(s) 97, 329, 471, 2011
TaqI TCGA 7 cut(s) 386, 508, 833, 928, 1170, 1892, 1933
TaqII GACCGA 1 cut(s) 372
TauI GCSGC 3 cut(s) 119, 1973, 2177
TfiI GAWTC 7 cut(s) 148, 748, 925, 1055, 1187, 1244, 1398
Tru1I TTAA 9 cut(s) 351, 587, 618, 767, 1238, 1250, 1710, 1715, 1863
Tru9I TTAA 9 cut(s) 351, 587, 618, 767, 1238, 1250, 1710, 1715, 1863
TscAI CASTG 2 cut(s) 1460, 2191
TseFI GTSAC 3 cut(s) 563, 993, 1718
TseI GCWGC 6 cut(s) 1387, 1675, 1856, 1939, 2016, 2050
Tsp45I GTSAC 3 cut(s) 563, 993, 1718
TspDTI ATGAA 9 cut(s) 374, 836, 966, 1206, 1454, 1572, 1650, 2054, 2130
TspGWI ACGGA 4 cut(s) 162, 238, 500, 1910
TspRI CASTG 2 cut(s) 1460, 2191
Van91I CCANNNNNTGG 2 cut(s) 1412, 1885
VpaK11BI GGWCC 3 cut(s) 246, 406, 1736
XapI RAATTY 9 cut(s) 394, 614, 1024, 1261, 1486, 1497, 1920, 1975, 2106
XbaI TCTAGA 1 cut(s) 1603
XceI RCATGY 2 cut(s) 602, 1412
XmiI GTMKAC 3 cut(s) 386, 1892, 2191
XmnI GAANNNNTTC 1 cut(s) 629
XspI CTAG 4 cut(s) 125, 1196, 1520, 1604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.