Rmu_sc0008797.1_g000003

FRIGIDA-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008797.1
OG0000126
Physical Location & Seq
Forward (+)
9070 .. 12218
3149 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008797.1_g000003.1.cds

Sequence Viewer

Length: 2049 bp
atggaggaggtagtcttggatttggaggaatgggagttgaagcagagtaatctcgaaaaggcctttgagaattgtcattcccgctgtaagaaggttgaagagcacttcaactcaacccggaattcgtttcagactcaattccgagagctcaataccagggaggaggaaatcgggctccgagagaagcagttgcaagagaaggagtcctattttgagtccctgaaggaatccaaggaggaggagttagatgcaattgaggaggtgattatagagaagcgagtacaagttgaacaagttaagactgagttggagtgtgttagtttattgattaaaggaaagagccaggagcttgatagtcaagagaagaggtttttggaagttgagaagttggttagagaaaatgagagggagtgtgatttgatccaaaaccgtattgaagaggggacgacgaatttgaggaggattgagaaagttattggggaaatggatgtgaaagtgaaaagttttagattgctagagaaatccatggaggattggggccataagcttgacttgaaaaagagggaacttgaaggaatctctgagaaccttgcattgaaaaaagagctattgaatcaaactattcgagagcttcattttattgctaacagggtcaaatactgcctcaatgaagttcaaaggaaagagagggaacttgaactgaaagagacacaagttgaatcaaaagttgaggagtttaagttgacagagacgagggtcaacgaacgcctcaatgaggttgaattgaaacaaaagcagttttatttgctggagaagtcagtacaagaagagaaacaacatttggtggtgctcctaaagaatgccgaagagcgtgaaaagcatttggattcactccaaaagttggtggaagagggcgaaaaggacatggattcactatcacatgaacttgagagggaagtgggggaacttgatcaacaggtcaaagaccttggattgaagcagacacagtttgattttctattgaacaaggagcaatcagaacatgctcctggggctaccaacgaggctattccttcatctagtaacaatgtgacaaacttcgttccttcccttgccaatatggaggaaccagaatcttcactagctagaaatgcagaaacttttctttcttccaatgttcaaccacatgccaccagcgaggaaaggaatgtgccagggtttctagaggataataagagtgggaatgattccacacagaatgaattggctgcttctcttctgttggtaccagacccagctaaactagtgttgaataacatgcaaaaatctcttgctagatacttgagaaatggagattttgaagaaagtatcatgtcgagtaacattttcatactgaaggagctaatgattgtttcgccacttgttggatctcatctgaaagcagattcaacaactttagcagcccagtggaaagagaagatgagaggcaatactgtaaattcagaggaaagtttagtatttttgctgttcattgctatgtatggattggtttcgatgttaaatgtagatgagattgtaaagcttcttgggttgatttctcagaatgaaaaggctctagaattgtgtcatgcacatggttttgcagctaagatcactgatttcattctgattttgatacaaaagaagcatataattgaggctgtcagatttatttgcaccttcaagttaattgataagctaccgccaataccactcttgaaagaatatgtggaggatgcaaagaagtgttttgaagtactttgcaggataaggattgctcttgatgaaaaggttaaggctgtagacaacctaataggttatctaagagctgtgcaccaatgcatcaaagattataatctcgagtccgaatttccatctacagacattgaaatgcaattagttcgactggaaaaactgaaggagaattggagaattttggcgccatctgttggttttaatgataagcaaaaagagcagagaaaaaggaaagaacctgataacaagacttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida

Protein Analysis

682

Amino Acids

79.21

Weight (kDa)

5.21

Isoelectric Point (pI)

45.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1893
Acc65I GGTACC 1 cut(s) 1285
AccB1I GGYRCC 2 cut(s) 1285, 1978
AccB7I CCANNNNNTGG 3 cut(s) 901, 1424, 1988
AccI GTMKAC 1 cut(s) 1842
AciI CCGC 2 cut(s) 82, 1742
AclWI GGATC 2 cut(s) 415, 1435
AcsI RAATTY 5 cut(s) 121, 451, 1498, 1907, 1971
AcuI CTGAAG 3 cut(s) 242, 1415, 1976
AcyI GRCGYC 1 cut(s) 1979
AfaI GTAC 4 cut(s) 282, 822, 1287, 1797
AfiI CCNNNNNNNGG 4 cut(s) 775, 901, 1424, 1988
AhlI ACTAGT 1 cut(s) 1303
AjnI CCWGG 4 cut(s) 155, 342, 1048, 1213
AjuI GAANNNNNNNTTGG 4 cut(s) 356, 388, 824, 856
Alw21I GWGCWC 4 cut(s) 105, 150, 852, 1875
Alw26I GTCTC 2 cut(s) 701, 743
Alw44I GTGCAC 1 cut(s) 1871
AlwI GGATC 2 cut(s) 415, 1435
Ama87I CYCGRG 1 cut(s) 1898
AoxI GGCC 2 cut(s) 60, 538
ApaLI GTGCAC 1 cut(s) 1871
ApeKI GCWGC 3 cut(s) 1268, 1460, 1643
ApoI RAATTY 5 cut(s) 121, 451, 1498, 1907, 1971
ArsI GACNNNNNNTTYG 2 cut(s) 436, 468
Asp700I GAANNNNTTC 1 cut(s) 1161
Asp718I GGTACC 1 cut(s) 1285
AspLEI GCGC 1 cut(s) 1981
AspS9I GGNCC 1 cut(s) 538
AsuC2I CCSGG 1 cut(s) 118
AsuHPI GGTGA 1 cut(s) 274
AvaI CYCGRG 1 cut(s) 1898
BaeGI GKGCMC 1 cut(s) 1875
BanI GGYRCC 2 cut(s) 1285, 1978
BanII GRGCYC 2 cut(s) 150, 177
Bbv12I GWGCWC 4 cut(s) 105, 150, 852, 1875
BbvI GCAGC 3 cut(s) 1255, 1472, 1655
BccI CCATC 2 cut(s) 1921, 1990
BcgI CGANNNNNNTGC 2 cut(s) 1922, 1956
BciT130I CCWGG 4 cut(s) 157, 344, 1050, 1215
BclI TGATCA 1 cut(s) 970
BcnI CCSGG 1 cut(s) 118
BcoDI GTCTC 2 cut(s) 701, 743
BcuI ACTAGT 1 cut(s) 1303
BfaI CTAG 8 cut(s) 515, 1080, 1142, 1146, 1223, 1304, 1335, 1616
BfmI CTRYAG 2 cut(s) 1839, 1917
BfoI RGCGCY 1 cut(s) 1982
BisI GCNGC 3 cut(s) 1269, 1461, 1644
BlsI GCNGC 3 cut(s) 1270, 1462, 1645
BmcAI AGTACT 1 cut(s) 1797
Bme1390I CCNGG 5 cut(s) 118, 157, 344, 1050, 1215
BmeT110I CYCGRG 1 cut(s) 1898
BmgT120I GGNCC 1 cut(s) 538
BmiI GGNNCC 5 cut(s) 176, 539, 1128, 1287, 1980
BmrFI CCNGG 5 cut(s) 118, 157, 344, 1050, 1215
BmrI ACTGGG 1 cut(s) 1459
BmsI GCATC 3 cut(s) 238, 1765, 1890
BmuI ACTGGG 1 cut(s) 1459
BoxI GACNNNNGTC 1 cut(s) 755
BpmI CTGGAG 1 cut(s) 830
BpuEI CTTGAG 2 cut(s) 968, 1363
BpuMI CCSGG 1 cut(s) 118
BsaBI GATNNNNATC 1 cut(s) 1893
BsaHI GRCGYC 1 cut(s) 1979
BsaJI CCNNGG 6 cut(s) 156, 231, 525, 988, 1049, 1214
BsaXI ACNNNNNCTCC 4 cut(s) 227, 257, 725, 755
Bsc4I CCNNNNNNNGG 4 cut(s) 775, 901, 1424, 1988
Bse1I ACTGG 2 cut(s) 1465, 1950
Bse3DI GCAATG 1 cut(s) 1530
Bse8I GATNNNNATC 1 cut(s) 1893
BseBI CCWGG 4 cut(s) 157, 344, 1050, 1215
BseDI CCNNGG 6 cut(s) 156, 231, 525, 988, 1049, 1214
BseGI GGATG 2 cut(s) 493, 1780
BseJI GATNNNNATC 1 cut(s) 1893
BseLI CCNNNNNNNGG 4 cut(s) 775, 901, 1424, 1988
BseMI GCAATG 1 cut(s) 1530
BseMII CTCAG 3 cut(s) 294, 573, 1613
BseNI ACTGG 2 cut(s) 1465, 1950
BseRI GAGGAG 7 cut(s) 20, 176, 251, 254, 272, 472, 746
BseSI GKGCMC 1 cut(s) 1875
BseXI GCAGC 3 cut(s) 1255, 1472, 1655
BseYI CCCAGC 1 cut(s) 1294
BshFI GGCC 2 cut(s) 62, 540
BshNI GGYRCC 2 cut(s) 1285, 1978
BsiHKAI GWGCWC 4 cut(s) 105, 150, 852, 1875
BsiHKCI CYCGRG 1 cut(s) 1898
BsiSI CCGG 1 cut(s) 118
BslFI GGGAC 2 cut(s) 202, 457
BslI CCNNNNNNNGG 4 cut(s) 775, 901, 1424, 1988
BsmAI GTCTC 2 cut(s) 701, 743
BsmBI CGTCTC 1 cut(s) 743
BsmFI GGGAC 2 cut(s) 202, 457
BsmI GAATGC 1 cut(s) 865
BsnI GGCC 2 cut(s) 62, 540
BsoBI CYCGRG 1 cut(s) 1898
Bsp1286I GDGCHC 5 cut(s) 105, 150, 177, 852, 1875
Bsp143I GATC 4 cut(s) 420, 970, 1427, 1650
Bsp19I CCATGG 1 cut(s) 525
BspACI CCGC 2 cut(s) 82, 1742
BspANI GGCC 2 cut(s) 62, 540
BspCNI CTCAG 3 cut(s) 295, 574, 1612
BspLI GGNNCC 5 cut(s) 176, 539, 1128, 1287, 1980
BspPI GGATC 2 cut(s) 415, 1435
BspQI GCTCTTC 2 cut(s) 93, 861
BspT107I GGYRCC 2 cut(s) 1285, 1978
BsrDI GCAATG 1 cut(s) 1530
BsrI ACTGG 2 cut(s) 1465, 1950
BssECI CCNNGG 6 cut(s) 156, 231, 525, 988, 1049, 1214
BssMI GATC 4 cut(s) 420, 970, 1427, 1650
BssNI GRCGYC 1 cut(s) 1979
BssT1I CCWWGG 3 cut(s) 231, 525, 988
Bst2UI CCWGG 4 cut(s) 157, 344, 1050, 1215
Bst4CI ACNGT 3 cut(s) 431, 1008, 1495
Bst6I CTCTTC 7 cut(s) 93, 359, 432, 822, 861, 903, 1281
BstACI GRCGYC 1 cut(s) 1979
BstDEI CTNAG 5 cut(s) 303, 582, 1599, 1647, 1862
BstDSI CCRYGG 1 cut(s) 525
BstENI CCTNNNNNAGG 1 cut(s) 773
BstF5I GGATG 2 cut(s) 493, 1780
BstH2I RGCGCY 1 cut(s) 1982
BstHHI GCGC 1 cut(s) 1981
BstKTI GATC 4 cut(s) 423, 973, 1430, 1653
BstMAI GTCTC 2 cut(s) 701, 743
BstMBI GATC 4 cut(s) 420, 970, 1427, 1650
BstMWI GCNNNNNNNGC 4 cut(s) 877, 1052, 1151, 2011
BstNI CCWGG 4 cut(s) 157, 344, 1050, 1215
BstNSI RCATGY 3 cut(s) 1046, 1190, 1321
BstPAI GACNNNNGTC 1 cut(s) 755
BstSCI CCNGG 5 cut(s) 116, 155, 342, 1048, 1213
BstSFI CTRYAG 2 cut(s) 1839, 1917
BstSLI GKGCMC 1 cut(s) 1875
BstV1I GCAGC 3 cut(s) 1255, 1472, 1655
BstX2I RGATCY 1 cut(s) 1427
BstYI RGATCY 1 cut(s) 1427
BsuRI GGCC 2 cut(s) 62, 540
BtgI CCRYGG 1 cut(s) 525
BtsCI GGATG 2 cut(s) 493, 1780
BtsIMutI CAGTG 2 cut(s) 1472, 1653
CfoI GCGC 1 cut(s) 1981
Cfr13I GGNCC 1 cut(s) 538
Csp6I GTAC 4 cut(s) 281, 821, 1286, 1796
CviAII CATG 9 cut(s) 526, 925, 941, 1043, 1187, 1318, 1372, 1628, 1634
CviQI GTAC 4 cut(s) 281, 821, 1286, 1796
DdeI CTNAG 5 cut(s) 303, 582, 1599, 1647, 1862
DinI GGCGCC 1 cut(s) 1980
DpnI GATC 4 cut(s) 422, 972, 1429, 1652
DpnII GATC 4 cut(s) 420, 970, 1427, 1650
Eam1104I CTCTTC 7 cut(s) 93, 359, 432, 822, 861, 903, 1281
EarI CTCTTC 7 cut(s) 93, 359, 432, 822, 861, 903, 1281
Ecl136II GAGCTC 1 cut(s) 148
Eco130I CCWWGG 3 cut(s) 231, 525, 988
Eco147I AGGCCT 1 cut(s) 62
Eco24I GRGCYC 2 cut(s) 150, 177
Eco53kI GAGCTC 1 cut(s) 148
Eco57I CTGAAG 3 cut(s) 242, 1415, 1976
Eco88I CYCGRG 1 cut(s) 1898
EcoICRI GAGCTC 1 cut(s) 148
EcoNI CCTNNNNNAGG 1 cut(s) 773
EcoRI GAATTC 1 cut(s) 121
EcoRII CCWGG 4 cut(s) 155, 342, 1048, 1213
EcoT14I CCWWGG 3 cut(s) 231, 525, 988
EcoT22I ATGCAT 1 cut(s) 1883
EcoT38I GRGCYC 2 cut(s) 150, 177
EgeI GGCGCC 1 cut(s) 1980
EheI GGCGCC 1 cut(s) 1980
ErhI CCWWGG 3 cut(s) 231, 525, 988
Esp3I CGTCTC 1 cut(s) 743
FaeI CATG 9 cut(s) 529, 928, 944, 1046, 1190, 1321, 1375, 1631, 1637
FalI AAGNNNNNCTT 2 cut(s) 536, 568
FaqI GGGAC 2 cut(s) 202, 457
FatI CATG 9 cut(s) 525, 924, 940, 1042, 1186, 1317, 1371, 1627, 1633
FauI CCCGC 1 cut(s) 89
FbaI TGATCA 1 cut(s) 970
FblI GTMKAC 1 cut(s) 1842
Fnu4HI GCNGC 3 cut(s) 1269, 1461, 1644
FokI GGATG 2 cut(s) 500, 1787
FriOI GRGCYC 2 cut(s) 150, 177
Fsp4HI GCNGC 3 cut(s) 1269, 1461, 1644
FspBI CTAG 8 cut(s) 515, 1080, 1142, 1146, 1223, 1304, 1335, 1616
GlaI GCGC 1 cut(s) 1980
GluI GCNGC 3 cut(s) 1269, 1461, 1644
GsaI CCCAGC 1 cut(s) 1298
GsuI CTGGAG 1 cut(s) 830
HaeII RGCGCY 1 cut(s) 1982
HaeIII GGCC 2 cut(s) 62, 540
HapII CCGG 1 cut(s) 118
HhaI GCGC 1 cut(s) 1981
Hin1I GRCGYC 1 cut(s) 1979
Hin1II CATG 9 cut(s) 529, 928, 944, 1046, 1190, 1321, 1375, 1631, 1637
Hin6I GCGC 1 cut(s) 1979
HinP1I GCGC 1 cut(s) 1979
HincII GTYRAC 2 cut(s) 744, 760
HindII GTYRAC 2 cut(s) 744, 760
HindIII AAGCTT 2 cut(s) 545, 1580
HpaII CCGG 1 cut(s) 118
HphI GGTGA 1 cut(s) 274
Hpy166II GTNNAC 4 cut(s) 744, 760, 1843, 1873
Hpy188III TCNNGA 8 cut(s) 53, 359, 626, 1223, 1616, 1756, 1820, 1898
Hpy8I GTNNAC 4 cut(s) 744, 760, 1843, 1873
Hpy99I CGWCG 1 cut(s) 451
HpyAV CCTTC 9 cut(s) 85, 193, 217, 566, 1083, 1116, 1390, 1729, 1951
HpyCH4III ACNGT 3 cut(s) 431, 1008, 1495
HpyF10VI GCNNNNNNNGC 4 cut(s) 877, 1052, 1151, 2011
HpyF3I CTNAG 5 cut(s) 303, 582, 1599, 1647, 1862
Hsp92I GRCGYC 1 cut(s) 1979
Hsp92II CATG 9 cut(s) 529, 928, 944, 1046, 1190, 1321, 1375, 1631, 1637
HspAI GCGC 1 cut(s) 1979
KasI GGCGCC 1 cut(s) 1978
KpnI GGTACC 1 cut(s) 1289
Ksp22I TGATCA 1 cut(s) 970
Kzo9I GATC 4 cut(s) 420, 970, 1427, 1650
LguI GCTCTTC 2 cut(s) 93, 861
LmnI GCTCC 6 cut(s) 180, 346, 855, 1030, 1051, 1399
Lsp1109I GCAGC 3 cut(s) 1255, 1472, 1655
LweI GCATC 3 cut(s) 238, 1765, 1890
MaeI CTAG 8 cut(s) 515, 1080, 1142, 1146, 1223, 1304, 1335, 1616
MaeIII GTNAC 3 cut(s) 1082, 1090, 1379
MalI GATC 4 cut(s) 422, 972, 1429, 1652
MboI GATC 4 cut(s) 420, 970, 1427, 1650
MfeI CAATTG 1 cut(s) 252
MflI RGATCY 1 cut(s) 1427
MhlI GDGCHC 5 cut(s) 105, 150, 177, 852, 1875
Mly113I GGCGCC 1 cut(s) 1979
MlyI GAGTC 4 cut(s) 127, 212, 224, 1910
MmeI TCCRAC 2 cut(s) 288, 1405
Mph1103I ATGCAT 1 cut(s) 1883
MroXI GAANNNNTTC 1 cut(s) 1161
MseI TTAA 8 cut(s) 297, 330, 738, 1559, 1727, 1833, 1995, 2047
MslI CAYNNNNRTG 3 cut(s) 1535, 1632, 1928
MspA1I CMGCKG 1 cut(s) 84
MspI CCGG 1 cut(s) 118
MspR9I CCNGG 5 cut(s) 118, 157, 344, 1050, 1215
MunI CAATTG 1 cut(s) 252
Mva1269I GAATGC 1 cut(s) 865
MvaI CCWGG 4 cut(s) 157, 344, 1050, 1215
MwoI GCNNNNNNNGC 4 cut(s) 877, 1052, 1151, 2011
NarI GGCGCC 1 cut(s) 1979
NciI CCSGG 1 cut(s) 118
NcoI CCATGG 1 cut(s) 525
NdeII GATC 4 cut(s) 420, 970, 1427, 1650
NlaIII CATG 9 cut(s) 529, 928, 944, 1046, 1190, 1321, 1375, 1631, 1637
NlaIV GGNNCC 5 cut(s) 176, 539, 1128, 1287, 1980
NmuCI GTSAC 1 cut(s) 1090
NsiI ATGCAT 1 cut(s) 1883
NspI RCATGY 3 cut(s) 1046, 1190, 1321
PaeR7I CTCGAG 1 cut(s) 1898
PceI AGGCCT 1 cut(s) 62
PciSI GCTCTTC 2 cut(s) 93, 861
PctI GAATGC 1 cut(s) 865
PdmI GAANNNNTTC 1 cut(s) 1161
PfeI GAWTC 9 cut(s) 227, 576, 613, 719, 887, 929, 1133, 1247, 1445
PflMI CCANNNNNTGG 3 cut(s) 901, 1424, 1988
PkrI GCNGC 3 cut(s) 1270, 1462, 1645
PleI GAGTC 4 cut(s) 127, 211, 223, 1909
PluTI GGCGCC 1 cut(s) 1982
PpsI GAGTC 4 cut(s) 127, 211, 223, 1909
PshAI GACNNNNGTC 1 cut(s) 755
PsiI TTATAA 1 cut(s) 1893
Psp124BI GAGCTC 1 cut(s) 150
Psp6I CCWGG 4 cut(s) 155, 342, 1048, 1213
PspFI CCCAGC 1 cut(s) 1294
PspGI CCWGG 4 cut(s) 155, 342, 1048, 1213
PspN4I GGNNCC 5 cut(s) 176, 539, 1128, 1287, 1980
PspPI GGNCC 1 cut(s) 538
PsuI RGATCY 1 cut(s) 1427
RsaI GTAC 4 cut(s) 282, 822, 1287, 1797
RsaNI GTAC 4 cut(s) 281, 821, 1286, 1796
RseI CAYNNNNRTG 3 cut(s) 1535, 1632, 1928
SacI GAGCTC 1 cut(s) 150
SapI GCTCTTC 2 cut(s) 93, 861
SaqAI TTAA 8 cut(s) 297, 330, 738, 1559, 1727, 1833, 1995, 2047
SatI GCNGC 3 cut(s) 1269, 1461, 1644
Sau3AI GATC 4 cut(s) 420, 970, 1427, 1650
Sau96I GGNCC 1 cut(s) 538
ScaI AGTACT 1 cut(s) 1797
SchI GAGTC 4 cut(s) 127, 212, 224, 1910
ScrFI CCNGG 5 cut(s) 118, 157, 344, 1050, 1215
SduI GDGCHC 5 cut(s) 105, 150, 177, 852, 1875
SfaNI GCATC 3 cut(s) 238, 1765, 1890
SfcI CTRYAG 2 cut(s) 1839, 1917
SfoI GGCGCC 1 cut(s) 1980
Sfr274I CTCGAG 1 cut(s) 1898
SlaI CTCGAG 1 cut(s) 1898
SmiMI CAYNNNNRTG 3 cut(s) 1535, 1632, 1928
SmlI CTYRAG 3 cut(s) 947, 1342, 1898
SmoI CTYRAG 3 cut(s) 947, 1342, 1898
SpeI ACTAGT 1 cut(s) 1303
SseBI AGGCCT 1 cut(s) 62
SsiI CCGC 2 cut(s) 82, 1742
SspDI GGCGCC 1 cut(s) 1978
SspMI CTAG 8 cut(s) 515, 1080, 1142, 1146, 1223, 1304, 1335, 1616
SstI GAGCTC 1 cut(s) 150
StuI AGGCCT 1 cut(s) 62
StyD4I CCNGG 5 cut(s) 116, 155, 342, 1048, 1213
StyI CCWWGG 3 cut(s) 231, 525, 988
TaaI ACNGT 3 cut(s) 431, 1008, 1495
TaqI TCGA 6 cut(s) 54, 625, 1376, 1553, 1899, 1942
TatI WGTACW 3 cut(s) 280, 820, 1795
TfiI GAWTC 9 cut(s) 227, 576, 613, 719, 887, 929, 1133, 1247, 1445
Tru1I TTAA 8 cut(s) 297, 330, 738, 1559, 1727, 1833, 1995, 2047
Tru9I TTAA 8 cut(s) 297, 330, 738, 1559, 1727, 1833, 1995, 2047
TscAI CASTG 2 cut(s) 1472, 1660
TseFI GTSAC 1 cut(s) 1090
TseI GCWGC 3 cut(s) 1268, 1460, 1643
Tsp45I GTSAC 1 cut(s) 1090
TspRI CASTG 2 cut(s) 1472, 1660
Van91I CCANNNNNTGG 3 cut(s) 901, 1424, 1988
VneI GTGCAC 1 cut(s) 1871
XagI CCTNNNNNAGG 1 cut(s) 773
XapI RAATTY 5 cut(s) 121, 451, 1498, 1907, 1971
XbaI TCTAGA 2 cut(s) 1222, 1615
XceI RCATGY 3 cut(s) 1046, 1190, 1321
XhoI CTCGAG 1 cut(s) 1898
XmiI GTMKAC 1 cut(s) 1842
XmnI GAANNNNTTC 1 cut(s) 1161
XspI CTAG 8 cut(s) 515, 1080, 1142, 1146, 1223, 1304, 1335, 1616
ZrmI AGTACT 1 cut(s) 1797
Zsp2I ATGCAT 1 cut(s) 1883
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.