FvH4_6g04550

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000126
Physical Location & Seq
Reverse (-)
2509713 .. 2514498
4786 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g04550.t1

Sequence Viewer

Length: 2820 bp
ATGATGACGGAGGAGCGGTTTGACCCGACCCGGAACCGGGTCCGGGCCGGGTTCCGGGAGCTGGGAAGGTTGGTGAAGCAGATGGAAGGTGTAGAGTTGAAGCTGAGGTGTGATTCTGAAGCGAAAGCGGTGGAGATTGAAGAAGGTAAGAAGAAACTGAGCTGTCTTGAGTTGAAATTTGAAGAGAAAAATAGAGAGCTTAGTGCTAGGGAGAAGAGGATAGAGGAGCTTGAGGGGAAGGGGGAGGATGTGAAGGTGAGAGGGGAGAGATTGAAGGGTTTACAGGAGTTGATTGTGAAATGTGATGATGAGGTGACGCTGAAGAGGGTGAGGATTGATTTGTTACAGAAATCGATGATGGAGTGTTCGAATATATTGGAAGCTAGAGAGAGGAAGATCAGGGAGTGTAATGTGGGTTTTGATTTGCTTAAGAAGTCGATGGAGGAGTGGGGATGTGGAGTTGAGATGAAGGAGAGGGACGTGGAAGGGTTTGTGGTGAAGATGGAGTTGAAGGGGAAAGAGGTGGAGTCGAAAATTGAGGAGCTTGAGTTGATTGATAAGAGGGTGAAGGATTGTGTTGGTGATGTTGAGTTGAGAGTAGGGCAGTTTGAAGAACTTGAGAAATCGATGCAGGATGGAATGCAAGAGTCGGTGCGTGAGGGGGAAAGGAATTTGGATTCAGCTCGAAAGGCAGTGGAAGAGAGGGAGAAGGTTCTGGAGTTGCTAGGCCGGAAACTTGAAAGGAAGGAGAAGGAACTTGAAGAGCAGGCCAATGAGGTTAAGTTGAAAGAGAGTGTAGTAAAATCGAGGATTGAGGAACTGGATTCAAAGGACAAGATAATGAATGAACTCCTCAATGATGTTCAATTGAAGGAAAAAGGCTTGGAATCATTTAAGGAATCATTACAAAAAGACAGAAAGCATTTGGATTTGCTCCAAGAGTCGACAGCAGAGCGTGAGCAGCAGTTGGATTCACTCCAAAGATCGGTGCAGGATCGTGAAAACAGTTTGCTTTTGAAACAAACATCGGTACAAGAGCGTGAAAGAAATGTGGATTCACTATACCATGGACTTCAAAGGAGAGAAAGGGAACTAGAAAAGCAGGCCAAAGAGCTTGAATCAAAGCAGAAACAGTTTGATTCGCAGAGGAGGGGTAAGCATTTGGAACCTAACCCTGCTGCTAGAGATGCCAATGTTGTTTCATCCACTAGTGATCAATCCCGGATCAACATGGATGGTCGAAGCTTACAGTTAGTCATGAATGAGCAAGTGGAAAAAATTGATTCCGCAGGTAGCCTAATATCAGATGTTCTACATGCATCATCAGACCCGGCGAAATTGGTTTTGGATGCAATGGAAGGGTTTTATTCGTCAGATCTTGATGTGGAAAACAGAGATCTTGATCATTTGAGGGTTGTAAGAAAGAGCTGTATTCTTTTGCTACAGCAGTTAAAGAGAATGTCACCAATAATTAATCCTCAGGTGAGAGAAGAAGCAGTGAAATTGGCAGCTGTTTGGGATGAGAAGATGGCAGATACCGCTGATGATGATGATAATAGTTGGGGGGCTTTGGGCTTTTTGCTGCTGATCACTACATATGAATTGACAAGTAATTATCATTTGAGGGAGCTTCGAATGCTTCTTGATATGGTTTCTCAGCCAGAACAAGTTGCTGAGTTAAGTAGGGCTCTTGGTATCACTGATAAGGCTCCTGTGATGAACGCCGTTTCTTCCATAGTCAAGTCTGAGCCATCAGAATCTTCACTGGCTCGAAATGAAGCAATCCTTTCTCCTCCAAATAATAATACACAGAATGAAAGGATTGTTTCACTTTCTTCCATTGCCAAGATTAAGGTACCAGAATCTTTTGGAACTAGAAATTCAACAACTCTTTCTTCACTGAATAATGCTGAGCAACCAGAATCTTGTCTTACTAGCAATGTAGCAACTTTTTCTTCAACGAATAATTCTTCACAGAAAAACTTGTTGGTGGCTCTTCAATCATCATCAGATCCAGCAAAACTTGCTTTGGATATGATGCAACGGTCTTTTACATATTACTGGAGTCATAGAGATGTTAGTTCCAAAGAAAAGGTTGTATCGAGTAATATTTCTCTATTGAAGACTCTGATGGGACTCTCCATACATGTTGGACCTCATCTGAAAGAAAATGCAACAAATTTAGCATCCCAGTGGAGAGCACAGTTGATAGCTGATGCTGAGGATTCATTGGAGAGTTTGGGATATTTGCTGTTTATAGCTATGTATGGATTGGTTGCAACCTTACCTGAAGATGAGATTATAATGCTTCTTAGAAGGGTTTCGCAGCATAGACAGTCTCTATTGTTATGTCAGACACATCCTTTTGCAGATTATATCCCTGATTTTATACAGATGCTTATTGAAAAGAAGCTACTGATAGAGGCTGTTAAATCTATTTGTGCCTTCAAATTAAATGACAAGCTCCCCCCAGTGCCACTCTTAAGAGAATATGTGGAGGATGTAATGATGTCTGAAGTAATTTGCAGGTCACAGATGACACCTGATGAAAAGGATAAGGCTGTGATTGGTAAGATAGCTAAGCTAAGAGCTGCCATTCAGTGCATGAAAGATTACAACCTCGAGTCTGAATACTCGAAGACTGTTGAAATCCAAATAGTTCAGCTGGAAATGCTCAAGGAAAAATGGAGAAGTTTGGCGCCCAAAGTTGAACAAGAAGAGAGAAAAAGAAAGAACCCTTGTGCTAGCTCTTCTGCCCCAAAGTCACAACCAGGAAAAGTATCAAAAATAAAAATCATCTTCAGTGGTTCGAAACACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida TEX13

Protein Analysis

940

Amino Acids

107.07

Weight (kDa)

5.65

Isoelectric Point (pI)

49.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 410 - 572 2.8e-31 Frigida-like protein
Frigida PF07899 651 - 895 6.3e-46 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2303
Acc36I ACCTGC 2 cut(s) 1280, 2517
Acc65I GGTACC 1 cut(s) 1855
AccB1I GGYRCC 2 cut(s) 1855, 2698
AccBSI CCGCTC 1 cut(s) 16
AccI GTMKAC 1 cut(s) 944
AciI CCGC 4 cut(s) 16, 128, 1287, 1539
AclWI GGATC 3 cut(s) 1002, 1232, 2006
AcsI RAATTY 4 cut(s) 176, 670, 1879, 2179
AcuI CTGAAG 5 cut(s) 138, 341, 2310, 2535, 2785
AcyI GRCGYC 1 cut(s) 2699
AfaI GTAC 2 cut(s) 1032, 1857
AfiI CCNNNNNNNGG 6 cut(s) 36, 37, 43, 54, 61, 985
AflII CTTAAG 2 cut(s) 428, 2482
AflIII ACRYGT 1 cut(s) 2146
AhlI ACTAGT 1 cut(s) 1208
AjiI CACGTC 1 cut(s) 481
AjnI CCWGG 1 cut(s) 2770
AjuI GAANNNNNNNTTGG 4 cut(s) 1328, 1360, 1970, 2002
Alw21I GWGCWC 1 cut(s) 2203
Alw26I GTCTC 1 cut(s) 2343
AlwI GGATC 3 cut(s) 1002, 1232, 2006
Ama87I CYCGRG 1 cut(s) 2621
AoxI GGCC 4 cut(s) 45, 727, 768, 1104
ApeKI GCWGC 6 cut(s) 961, 1178, 1508, 1582, 2326, 2591
ApoI RAATTY 4 cut(s) 176, 670, 1879, 2179
AseI ATTAAT 1 cut(s) 1473
Asp700I GAANNNNTTC 1 cut(s) 2320
Asp718I GGTACC 1 cut(s) 1855
AspLEI GCGC 1 cut(s) 2701
AspS9I GGNCC 3 cut(s) 40, 45, 2153
AsuC2I CCSGG 7 cut(s) 31, 38, 44, 49, 56, 1222, 1331
AsuHPI GGTGA 9 cut(s) 85, 268, 325, 340, 508, 577, 593, 1455, 1495
AsuII TTCGAA 3 cut(s) 368, 1633, 2810
AsuNHI GCTAGC 1 cut(s) 2744
AvaI CYCGRG 1 cut(s) 2621
AvaII GGWCC 2 cut(s) 40, 2153
AxyI CCTNAGG 1 cut(s) 1479
BanI GGYRCC 2 cut(s) 1855, 2698
BanII GRGCYC 1 cut(s) 1690
BbsI GAAGAC 2 cut(s) 2129, 2645
Bbv12I GWGCWC 1 cut(s) 2203
BbvCI CCTCAGC 2 cut(s) 104, 2220
BbvI GCAGC 6 cut(s) 973, 1165, 1520, 1569, 2338, 2578
BccI CCATC 9 cut(s) 76, 352, 433, 496, 629, 1229, 1522, 1759, 2125
BceAI ACGGC 1 cut(s) 1709
BciT130I CCWGG 1 cut(s) 2772
BclI TGATCA 3 cut(s) 1213, 1402, 1587
BcnI CCSGG 7 cut(s) 31, 38, 44, 49, 56, 1222, 1331
BcoDI GTCTC 1 cut(s) 2343
BcuI ACTAGT 1 cut(s) 1208
BfaI CTAG 9 cut(s) 207, 384, 725, 1094, 1182, 1209, 1875, 1935, 2745
BfmI CTRYAG 1 cut(s) 1442
BfoI RGCGCY 1 cut(s) 2702
BfrI CTTAAG 2 cut(s) 428, 2482
BfuAI ACCTGC 2 cut(s) 1280, 2517
BglII AGATCT 2 cut(s) 1375, 1396
BisI GCNGC 6 cut(s) 962, 1179, 1509, 1583, 2327, 2592
BlpI GCTNAGC 2 cut(s) 1911, 2580
BlsI GCNGC 6 cut(s) 963, 1180, 1510, 1584, 2328, 2593
Bme1390I CCNGG 8 cut(s) 31, 38, 44, 49, 56, 1222, 1331, 2772
Bme18I GGWCC 2 cut(s) 40, 2153
BmeT110I CYCGRG 1 cut(s) 2621
BmgBI CACGTC 1 cut(s) 481
BmgT120I GGNCC 3 cut(s) 40, 45, 2153
BmiI GGNNCC 7 cut(s) 35, 41, 53, 1167, 1710, 1857, 2700
BmrFI CCNGG 8 cut(s) 31, 38, 44, 49, 56, 1222, 1331, 2772
BmrI ACTGGG 2 cut(s) 2185, 2465
BmsI GCATC 8 cut(s) 618, 1177, 1328, 1339, 2028, 2195, 2206, 2385
BmtI GCTAGC 1 cut(s) 2748
BmuI ACTGGG 2 cut(s) 2185, 2465
BpiI GAAGAC 2 cut(s) 2129, 2645
BpmI CTGGAG 2 cut(s) 737, 2083
Bpu10I CCTNAGC 2 cut(s) 104, 2220
Bpu1102I GCTNAGC 2 cut(s) 1911, 2580
Bpu14I TTCGAA 3 cut(s) 368, 1633, 2810
BpuEI CTTGAG 5 cut(s) 188, 251, 566, 638, 2660
BpuMI CCSGG 7 cut(s) 31, 38, 44, 49, 56, 1222, 1331
Bsa29I ATCGAT 2 cut(s) 353, 626
BsaBI GATNNNNATC 1 cut(s) 1401
BsaHI GRCGYC 1 cut(s) 2699
BsaJI CCNNGG 1 cut(s) 1066
BsaXI ACNNNNNCTCC 3 cut(s) 32, 533, 563
Bsc4I CCNNNNNNNGG 6 cut(s) 36, 37, 43, 54, 61, 985
Bse1I ACTGG 5 cut(s) 825, 1770, 2066, 2191, 2471
Bse21I CCTNAGG 1 cut(s) 1479
Bse3DI GCAATG 3 cut(s) 1359, 1839, 1945
Bse8I GATNNNNATC 1 cut(s) 1401
BseBI CCWGG 1 cut(s) 2772
BseCI ATCGAT 2 cut(s) 353, 626
BseDI CCNNGG 1 cut(s) 1066
BseJI GATNNNNATC 1 cut(s) 1401
BseLI CCNNNNNNNGG 6 cut(s) 36, 37, 43, 54, 61, 985
BseMI GCAATG 3 cut(s) 1359, 1839, 1945
BseMII CTCAG 8 cut(s) 95, 149, 1493, 1665, 1670, 1737, 1902, 2211
BseNI ACTGG 5 cut(s) 825, 1770, 2066, 2191, 2471
BseRI GAGGAG 7 cut(s) 26, 239, 458, 554, 842, 1162, 1782
BseXI GCAGC 6 cut(s) 973, 1165, 1520, 1569, 2338, 2578
BseYI CCCAGC 1 cut(s) 61
BsgI GTGCAG 1 cut(s) 1010
BshFI GGCC 4 cut(s) 47, 729, 770, 1106
BshNI GGYRCC 2 cut(s) 1855, 2698
BshVI ATCGAT 2 cut(s) 353, 626
BsiHKAI GWGCWC 1 cut(s) 2203
BsiHKCI CYCGRG 1 cut(s) 2621
BsiSI CCGG 8 cut(s) 31, 37, 43, 48, 55, 730, 1222, 1331
BslFI GGGAC 2 cut(s) 491, 2148
BslI CCNNNNNNNGG 6 cut(s) 36, 37, 43, 54, 61, 985
BsmAI GTCTC 1 cut(s) 2343
BsmFI GGGAC 2 cut(s) 491, 2148
BsmI GAATGC 2 cut(s) 645, 1641
BsnI GGCC 4 cut(s) 47, 729, 770, 1106
BsoBI CYCGRG 1 cut(s) 2621
Bsp119I TTCGAA 3 cut(s) 368, 1633, 2810
Bsp1286I GDGCHC 2 cut(s) 1690, 2203
Bsp1720I GCTNAGC 2 cut(s) 1911, 2580
Bsp19I CCATGG 1 cut(s) 1066
BspACI CCGC 4 cut(s) 16, 128, 1287, 1539
BspANI GGCC 4 cut(s) 47, 729, 770, 1106
BspCNI CTCAG 8 cut(s) 96, 150, 1492, 1666, 1669, 1738, 1903, 2212
BspDI ATCGAT 2 cut(s) 353, 626
BspHI TCATGA 1 cut(s) 1257
BspLI GGNNCC 7 cut(s) 35, 41, 53, 1167, 1710, 1857, 2700
BspMI ACCTGC 2 cut(s) 1280, 2517
BspOI GCTAGC 1 cut(s) 2748
BspPI GGATC 3 cut(s) 1002, 1232, 2006
BspQI GCTCTTC 3 cut(s) 756, 2001, 2755
BspT104I TTCGAA 3 cut(s) 368, 1633, 2810
BspT107I GGYRCC 2 cut(s) 1855, 2698
BspTI CTTAAG 2 cut(s) 428, 2482
BsrBI CCGCTC 1 cut(s) 16
BsrDI GCAATG 3 cut(s) 1359, 1839, 1945
BsrI ACTGG 5 cut(s) 825, 1770, 2066, 2191, 2471
BssECI CCNNGG 1 cut(s) 1066
BssNI GRCGYC 1 cut(s) 2699
BssT1I CCWWGG 1 cut(s) 1066
Bst2UI CCWGG 1 cut(s) 2772
Bst4CI ACNGT 7 cut(s) 1007, 1134, 1251, 2046, 2205, 2337, 2644
Bst6I CTCTTC 8 cut(s) 177, 209, 317, 693, 756, 2001, 2712, 2755
BstACI GRCGYC 1 cut(s) 2699
BstAFI CTTAAG 2 cut(s) 428, 2482
BstAPI GCANNNNNTGC 1 cut(s) 2024
BstBI TTCGAA 3 cut(s) 368, 1633, 2810
BstC8I GCNNGC 3 cut(s) 768, 1104, 2746
BstDSI CCRYGG 1 cut(s) 1066
BstH2I RGCGCY 1 cut(s) 2702
BstHHI GCGC 1 cut(s) 2701
BstMAI GTCTC 1 cut(s) 2343
BstMWI GCNNNNNNNGC 7 cut(s) 689, 961, 1187, 1538, 1636, 2024, 2671
BstNI CCWGG 1 cut(s) 2772
BstNSI RCATGY 2 cut(s) 1319, 2150
BstSCI CCNGG 8 cut(s) 29, 36, 42, 47, 54, 1220, 1329, 2770
BstSFI CTRYAG 1 cut(s) 1442
BstV1I GCAGC 6 cut(s) 973, 1165, 1520, 1569, 2338, 2578
BstV2I GAAGAC 2 cut(s) 2129, 2645
BstX2I RGATCY 3 cut(s) 1375, 1396, 2011
BstYI RGATCY 3 cut(s) 1375, 1396, 2011
Bsu15I ATCGAT 2 cut(s) 353, 626
Bsu36I CCTNAGG 1 cut(s) 1479
BsuRI GGCC 4 cut(s) 47, 729, 770, 1106
BsuTUI ATCGAT 2 cut(s) 353, 626
BtgI CCRYGG 1 cut(s) 1066
BtrI CACGTC 1 cut(s) 481
BtsI GCAGTG 2 cut(s) 699, 1503
BtsIMutI CAGTG 9 cut(s) 699, 1503, 1698, 1763, 1898, 2198, 2478, 2606, 2809
BveI ACCTGC 2 cut(s) 1280, 2517
Cac8I GCNNGC 3 cut(s) 768, 1104, 2746
CciI TCATGA 1 cut(s) 1257
CfoI GCGC 1 cut(s) 2701
Cfr13I GGNCC 3 cut(s) 40, 45, 2153
ClaI ATCGAT 2 cut(s) 353, 626
CseI GACGC 1 cut(s) 325
Csp6I GTAC 2 cut(s) 1031, 1856
CviAII CATG 6 cut(s) 1067, 1231, 1258, 1316, 2147, 2605
CviQI GTAC 2 cut(s) 1031, 1856
DinI GGCGCC 1 cut(s) 2700
Eam1104I CTCTTC 8 cut(s) 177, 209, 317, 693, 756, 2001, 2712, 2755
EarI CTCTTC 8 cut(s) 177, 209, 317, 693, 756, 2001, 2712, 2755
Eco130I CCWWGG 1 cut(s) 1066
Eco24I GRGCYC 1 cut(s) 1690
Eco47I GGWCC 2 cut(s) 40, 2153
Eco57I CTGAAG 5 cut(s) 138, 341, 2310, 2535, 2785
Eco81I CCTNAGG 1 cut(s) 1479
Eco88I CYCGRG 1 cut(s) 2621
EcoRII CCWGG 1 cut(s) 2770
EcoT14I CCWWGG 1 cut(s) 1066
EcoT22I ATGCAT 1 cut(s) 1321
EcoT38I GRGCYC 1 cut(s) 1690
EgeI GGCGCC 1 cut(s) 2700
EheI GGCGCC 1 cut(s) 2700
ErhI CCWWGG 1 cut(s) 1066
FaeI CATG 6 cut(s) 1070, 1234, 1261, 1319, 2150, 2608
FalI AAGNNNNNCTT 2 cut(s) 1770, 1802
FaqI GGGAC 2 cut(s) 491, 2148
FatI CATG 6 cut(s) 1066, 1230, 1257, 1315, 2146, 2604
FauNDI CATATG 1 cut(s) 1597
FbaI TGATCA 3 cut(s) 1213, 1402, 1587
FblI GTMKAC 1 cut(s) 944
Fnu4HI GCNGC 6 cut(s) 962, 1179, 1509, 1583, 2327, 2592
FriOI GRGCYC 1 cut(s) 1690
Fsp4HI GCNGC 6 cut(s) 962, 1179, 1509, 1583, 2327, 2592
FspBI CTAG 9 cut(s) 207, 384, 725, 1094, 1182, 1209, 1875, 1935, 2745
GlaI GCGC 1 cut(s) 2700
GluI GCNGC 6 cut(s) 962, 1179, 1509, 1583, 2327, 2592
GsaI CCCAGC 1 cut(s) 65
GsuI CTGGAG 2 cut(s) 737, 2083
HaeII RGCGCY 1 cut(s) 2702
HaeIII GGCC 4 cut(s) 47, 729, 770, 1106
HapII CCGG 8 cut(s) 31, 37, 43, 48, 55, 730, 1222, 1331
HgaI GACGC 1 cut(s) 325
HhaI GCGC 1 cut(s) 2701
Hin1I GRCGYC 1 cut(s) 2699
Hin1II CATG 6 cut(s) 1070, 1234, 1261, 1319, 2150, 2608
Hin6I GCGC 1 cut(s) 2699
HinP1I GCGC 1 cut(s) 2699
HincII GTYRAC 1 cut(s) 945
HindII GTYRAC 1 cut(s) 945
HindIII AAGCTT 1 cut(s) 1243
HpaII CCGG 8 cut(s) 31, 37, 43, 48, 55, 730, 1222, 1331
HphI GGTGA 9 cut(s) 85, 268, 325, 340, 508, 577, 593, 1455, 1495
Hpy166II GTNNAC 2 cut(s) 281, 945
Hpy188III TCNNGA 7 cut(s) 167, 716, 998, 1258, 1379, 1400, 1643
Hpy8I GTNNAC 2 cut(s) 281, 945
HpyCH4III ACNGT 7 cut(s) 1007, 1134, 1251, 2046, 2205, 2337, 2644
HpyCH4IV ACGT 1 cut(s) 480
HpyF10VI GCNNNNNNNGC 7 cut(s) 689, 961, 1187, 1538, 1636, 2024, 2671
HpySE526I ACGT 1 cut(s) 480
Hsp92I GRCGYC 1 cut(s) 2699
Hsp92II CATG 6 cut(s) 1070, 1234, 1261, 1319, 2150, 2608
HspAI GCGC 1 cut(s) 2699
KasI GGCGCC 1 cut(s) 2698
KpnI GGTACC 1 cut(s) 1859
Ksp22I TGATCA 3 cut(s) 1213, 1402, 1587
LguI GCTCTTC 3 cut(s) 756, 2001, 2755
LmnI GCTCC 8 cut(s) 13, 58, 226, 541, 939, 1627, 1714, 2469
Lsp1109I GCAGC 6 cut(s) 973, 1165, 1520, 1569, 2338, 2578
LweI GCATC 8 cut(s) 618, 1177, 1328, 1339, 2028, 2195, 2206, 2385
MaeI CTAG 9 cut(s) 207, 384, 725, 1094, 1182, 1209, 1875, 1935, 2745
MaeII ACGT 1 cut(s) 480
MaeIII GTNAC 5 cut(s) 313, 342, 1461, 2529, 2763
MbiI CCGCTC 1 cut(s) 16
MfeI CAATTG 1 cut(s) 866
MflI RGATCY 3 cut(s) 1375, 1396, 2011
MhlI GDGCHC 2 cut(s) 1690, 2203
Mly113I GGCGCC 1 cut(s) 2699
MlyI GAGTC 7 cut(s) 536, 656, 950, 2074, 2119, 2130, 2633
MmeI TCCRAC 2 cut(s) 948, 2131
Mph1103I ATGCAT 1 cut(s) 1321
MroXI GAANNNNTTC 1 cut(s) 2320
MslI CAYNNNNRTG 2 cut(s) 2073, 2191
MspA1I CMGCKG 3 cut(s) 1511, 1541, 2665
MspCI CTTAAG 2 cut(s) 428, 2482
MspI CCGG 8 cut(s) 31, 37, 43, 48, 55, 730, 1222, 1331
MspR9I CCNGG 8 cut(s) 31, 38, 44, 49, 56, 1222, 1331, 2772
MunI CAATTG 1 cut(s) 866
Mva1269I GAATGC 2 cut(s) 645, 1641
MvaI CCWGG 1 cut(s) 2772
MwoI GCNNNNNNNGC 7 cut(s) 689, 961, 1187, 1538, 1636, 2024, 2671
NarI GGCGCC 1 cut(s) 2699
NciI CCSGG 7 cut(s) 31, 38, 44, 49, 56, 1222, 1331
NcoI CCATGG 1 cut(s) 1066
NdeI CATATG 1 cut(s) 1597
NheI GCTAGC 1 cut(s) 2744
NlaIII CATG 6 cut(s) 1070, 1234, 1261, 1319, 2150, 2608
NlaIV GGNNCC 7 cut(s) 35, 41, 53, 1167, 1710, 1857, 2700
NmuCI GTSAC 4 cut(s) 313, 1461, 2529, 2763
NsiI ATGCAT 1 cut(s) 1321
NspI RCATGY 2 cut(s) 1319, 2150
NspV TTCGAA 3 cut(s) 368, 1633, 2810
PaeR7I CTCGAG 1 cut(s) 2621
PagI TCATGA 1 cut(s) 1257
PciI ACATGT 1 cut(s) 2146
PciSI GCTCTTC 3 cut(s) 756, 2001, 2755
PctI GAATGC 2 cut(s) 645, 1641
PdmI GAANNNNTTC 1 cut(s) 2320
PfoI TCCNGGA 2 cut(s) 54, 1220
PkrI GCNGC 6 cut(s) 963, 1180, 1510, 1584, 2328, 2593
PleI GAGTC 7 cut(s) 535, 655, 949, 2073, 2119, 2130, 2632
PluTI GGCGCC 1 cut(s) 2702
PpsI GAGTC 7 cut(s) 535, 655, 949, 2073, 2119, 2130, 2632
PscI ACATGT 1 cut(s) 2146
PshBI ATTAAT 1 cut(s) 1473
PsiI TTATAA 1 cut(s) 2303
Psp6I CCWGG 1 cut(s) 2770
PspFI CCCAGC 1 cut(s) 61
PspGI CCWGG 1 cut(s) 2770
PspN4I GGNNCC 7 cut(s) 35, 41, 53, 1167, 1710, 1857, 2700
PspPI GGNCC 3 cut(s) 40, 45, 2153
PspXI VCTCGAGB 1 cut(s) 2621
PsuI RGATCY 3 cut(s) 1375, 1396, 2011
PvuII CAGCTG 2 cut(s) 1511, 2665
RsaI GTAC 2 cut(s) 1032, 1857
RsaNI GTAC 2 cut(s) 1031, 1856
RseI CAYNNNNRTG 2 cut(s) 2073, 2191
SalI GTCGAC 1 cut(s) 943
SapI GCTCTTC 3 cut(s) 756, 2001, 2755
SatI GCNGC 6 cut(s) 962, 1179, 1509, 1583, 2327, 2592
Sau96I GGNCC 3 cut(s) 40, 45, 2153
SchI GAGTC 7 cut(s) 536, 656, 950, 2074, 2119, 2130, 2633
ScrFI CCNGG 8 cut(s) 31, 38, 44, 49, 56, 1222, 1331, 2772
SduI GDGCHC 2 cut(s) 1690, 2203
SfaNI GCATC 8 cut(s) 618, 1177, 1328, 1339, 2028, 2195, 2206, 2385
SfcI CTRYAG 1 cut(s) 1442
SfoI GGCGCC 1 cut(s) 2700
Sfr274I CTCGAG 1 cut(s) 2621
SfuI TTCGAA 3 cut(s) 368, 1633, 2810
SinI GGWCC 2 cut(s) 40, 2153
SlaI CTCGAG 1 cut(s) 2621
SmiMI CAYNNNNRTG 2 cut(s) 2073, 2191
SmlI CTYRAG 8 cut(s) 167, 230, 428, 545, 617, 2482, 2621, 2675
SmoI CTYRAG 8 cut(s) 167, 230, 428, 545, 617, 2482, 2621, 2675
SpeI ACTAGT 1 cut(s) 1208
SsiI CCGC 4 cut(s) 16, 128, 1287, 1539
SspDI GGCGCC 1 cut(s) 2698
SspI AATATT 1 cut(s) 2110
SspMI CTAG 9 cut(s) 207, 384, 725, 1094, 1182, 1209, 1875, 1935, 2745
StyD4I CCNGG 8 cut(s) 29, 36, 42, 47, 54, 1220, 1329, 2770
StyI CCWWGG 1 cut(s) 1066
TaaI ACNGT 7 cut(s) 1007, 1134, 1251, 2046, 2205, 2337, 2644
TaiI ACGT 1 cut(s) 483
TscAI CASTG 9 cut(s) 699, 1503, 1705, 1770, 1905, 2198, 2478, 2606, 2809
TseFI GTSAC 4 cut(s) 313, 1461, 2529, 2763
TseI GCWGC 6 cut(s) 961, 1178, 1508, 1582, 2326, 2591
Tsp45I GTSAC 4 cut(s) 313, 1461, 2529, 2763
TspGWI ACGGA 1 cut(s) 23
TspRI CASTG 9 cut(s) 699, 1503, 1705, 1770, 1905, 2198, 2478, 2606, 2809
Vha464I CTTAAG 2 cut(s) 428, 2482
VpaK11BI GGWCC 2 cut(s) 40, 2153
VspI ATTAAT 1 cut(s) 1473
XapI RAATTY 4 cut(s) 176, 670, 1879, 2179
XceI RCATGY 2 cut(s) 1319, 2150
XhoI CTCGAG 1 cut(s) 2621
XmiI GTMKAC 1 cut(s) 944
XmnI GAANNNNTTC 1 cut(s) 2320
XspI CTAG 9 cut(s) 207, 384, 725, 1094, 1182, 1209, 1875, 1935, 2745
Zsp2I ATGCAT 1 cut(s) 1321
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.