Rmu_sc0002923.1_g000020

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002923.1
OG0000126
Physical Location & Seq
Forward (+)
67191 .. 69809
2619 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002923.1_g000020.1.cds

Sequence Viewer

Length: 1674 bp
atggtcgaagtcgcagcgaccgaggctgacgtcggcattgcgtgtcagaccgtgcaatcccatctctcttacctcgttgatcaagtgagcttggggttggggacgagcacggagcatctaggttcgagggaggagaggctcaaccaacgcctccgcgaggttgaattgaaagaaaagcagttggattcactccaccgaagactcaaaaggagagagaagaaagtcgaagagctcaggttgagacaattcgagcctcgagtcaagacggaggaggaggaggaggagcagtcggtggatcaatctatcatgaacatggactgccgcgagttgctggtgttcatgaatgagcaattcagaagaattgatttggcgggagcccggatgtcggctgttcttcgagcatctccagaccctggaaagatggttctggaggcagtgcgagggttttatcctttgaatcggaatgtggatggaagcgagaccgaaatgcgtttgaggtgtatgagaaagagttgtgttctgtttttgcaggagttgaagacaatgtcgccgcaaattagtgctccggtgagagaggaggcaaagaagttagcagctgagtggaaagcgaagatggaggagggcagtgagaatagttgggaggccaaagggcttttgcggctcattgctgcttatggtttggatggtattatttgtgatgctgaggagcttcagagtcttgttgctatggtggagcagctggaacaatctagtgaactaagaaggactgttggtttgacagatggggcaccggggaccaatgccaattcttccattgttaagatcgagggacgagaatcctctcttgctagaaatgcagcgactccttcttctccgaatcattctttgccgaatgacacgttggtttctcttaagtcgtcatcggataaggcaaaacttgtgttgaaattgataaaaagatctttaacccaacactggacaaatggtgatgttagctccaaagaaatggttgtatcgagtaacatttctctattgaattttctaatgggagcctcagctcatgttggacctcatctgaaagatggtgcaacaaatctagcagcccagtggaaagcaaatatgacagctgatactgaaaactcattggagaatttgggattttcgctgtttatagctatatatggattggtttctactttaaacgaagatgagattgtaaagcttattggaaagatttcacagcataaacagtccctagaattatgtcagacacatggttttgcagataagattgctggtcttattgggaaacttattgaaaagaagcaagtgattgacgctgttagatcgatttgtttgttcaagttaattgacaagtttcccccagtaccgttgttaagagcatatgtacaggatgcaaaggagtggtccgaattagtttgcagcttaaagatatcagatgctgaaaaggagaaggctgtaaatggaaaaatagctgatcttagagctgtcattcaatgcatcaaagattgcaaccttgagtctgaatacccttccatgactgttgaaatgcatatagatcagctgcaaatacttgaggagaattggagaccatcttgtgtctccaaagttaaacaacaagagagaaaaaggaagagacctaatgtcaggtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida TEX13

Protein Analysis

557

Amino Acids

62.43

Weight (kDa)

6.61

Isoelectric Point (pI)

52.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 33
AccB1I GGYRCC 1 cut(s) 787
AccB7I CCANNNNNTGG 1 cut(s) 413
AccII CGCG 2 cut(s) 156, 324
AciI CCGC 5 cut(s) 154, 322, 371, 551, 658
AclWI GGATC 1 cut(s) 303
AcsI RAATTY 2 cut(s) 1036, 1150
AcuI CTGAAG 1 cut(s) 695
AcyI GRCGYC 1 cut(s) 30
AfaI GTAC 2 cut(s) 1389, 1410
AfiI CCNNNNNNNGG 4 cut(s) 157, 385, 413, 975
AflII CTTAAG 1 cut(s) 911
AflIII ACRYGT 1 cut(s) 897
AhdI GACNNNNNGTC 1 cut(s) 1664
AjnI CCWGG 1 cut(s) 412
AjuI GAANNNNNNNTTGG 2 cut(s) 884, 916
AloI GAACNNNNNNTCC 2 cut(s) 408, 440
Alw21I GWGCWC 3 cut(s) 110, 234, 565
Alw26I GTCTC 5 cut(s) 235, 473, 1603, 1627, 1651
AlwI GGATC 1 cut(s) 303
AlwNI CAGNNNCTG 2 cut(s) 413, 1463
Ama87I CYCGRG 1 cut(s) 255
AoxI GGCC 1 cut(s) 642
ApeKI GCWGC 8 cut(s) 14, 593, 668, 736, 857, 1100, 1443, 1585
ApoI RAATTY 2 cut(s) 1036, 1150
ArsI GACNNNNNNTTYG 4 cut(s) 757, 789, 1412, 1444
Asp700I GAANNNNTTC 1 cut(s) 1234
AspS9I GGNCC 3 cut(s) 795, 1067, 1428
AsuC2I CCSGG 2 cut(s) 379, 792
AsuHPI GGTGA 2 cut(s) 580, 998
AvaI CYCGRG 1 cut(s) 255
AvaII GGWCC 3 cut(s) 795, 1067, 1428
BaeGI GKGCMC 1 cut(s) 790
BanI GGYRCC 1 cut(s) 787
BanII GRGCYC 2 cut(s) 234, 379
BbsI GAAGAC 2 cut(s) 205, 545
Bbv12I GWGCWC 3 cut(s) 110, 234, 565
BbvCI CCTCAGC 2 cut(s) 702, 1054
BbvI GCAGC 8 cut(s) 26, 605, 655, 748, 869, 1112, 1455, 1572
BccI CCATC 8 cut(s) 69, 415, 464, 607, 677, 776, 1076, 1621
BciT130I CCWGG 1 cut(s) 414
BclI TGATCA 1 cut(s) 79
BcnI CCSGG 2 cut(s) 379, 792
BcoDI GTCTC 5 cut(s) 235, 473, 1603, 1627, 1651
BfaI CTAG 5 cut(s) 119, 750, 849, 1097, 1256
BfrI CTTAAG 1 cut(s) 911
BglII AGATCT 1 cut(s) 959
Bme1390I CCNGG 3 cut(s) 379, 414, 792
Bme18I GGWCC 3 cut(s) 795, 1067, 1428
BmeRI GACNNNNNGTC 1 cut(s) 1664
BmeT110I CYCGRG 1 cut(s) 255
BmgT120I GGNCC 3 cut(s) 795, 1067, 1428
BmiI GGNNCC 4 cut(s) 376, 789, 796, 1051
BmrFI CCNGG 3 cut(s) 379, 414, 792
BmrI ACTGGG 2 cut(s) 1099, 1379
BmsI GCATC 6 cut(s) 124, 410, 688, 1405, 1450, 1530
BmuI ACTGGG 2 cut(s) 1099, 1379
BpiI GAAGAC 2 cut(s) 205, 545
BpmI CTGGAG 2 cut(s) 390, 449
Bpu10I CCTNAGC 3 cut(s) 233, 702, 1054
BpuEI CTTGAG 2 cut(s) 1559, 1616
BpuMI CCSGG 2 cut(s) 379, 792
Bsa29I ATCGAT 1 cut(s) 1349
BsaHI GRCGYC 1 cut(s) 30
BsaI GGTCTC 3 cut(s) 473, 1603, 1651
BsaJI CCNNGG 3 cut(s) 21, 412, 791
BsaWI WCCGGW 1 cut(s) 565
BsaXI ACNNNNNCTCC 2 cut(s) 272, 302
Bsc4I CCNNNNNNNGG 4 cut(s) 157, 385, 413, 975
Bse1I ACTGG 3 cut(s) 980, 1105, 1385
Bse3DI GCAATG 2 cut(s) 36, 663
BseBI CCWGG 1 cut(s) 414
BseCI ATCGAT 1 cut(s) 1349
BseDI CCNNGG 3 cut(s) 21, 412, 791
BseGI GGATG 4 cut(s) 387, 475, 688, 1420
BseLI CCNNNNNNNGG 4 cut(s) 157, 385, 413, 975
BseMI GCAATG 2 cut(s) 36, 663
BseMII CTCAG 4 cut(s) 247, 588, 693, 1068
BseNI ACTGG 3 cut(s) 980, 1105, 1385
BseSI GKGCMC 1 cut(s) 790
BseXI GCAGC 8 cut(s) 26, 605, 655, 748, 869, 1112, 1455, 1572
Bsh1236I CGCG 2 cut(s) 156, 324
Bsh1285I CGRYCG 1 cut(s) 21
BshFI GGCC 1 cut(s) 644
BshNI GGYRCC 1 cut(s) 787
BshVI ATCGAT 1 cut(s) 1349
BsiEI CGRYCG 1 cut(s) 21
BsiHKAI GWGCWC 3 cut(s) 110, 234, 565
BsiHKCI CYCGRG 1 cut(s) 255
BsiSI CCGG 3 cut(s) 379, 566, 791
BslFI GGGAC 4 cut(s) 115, 808, 843, 1237
BslI CCNNNNNNNGG 4 cut(s) 157, 385, 413, 975
BsmAI GTCTC 5 cut(s) 235, 473, 1603, 1627, 1651
BsmFI GGGAC 4 cut(s) 115, 808, 843, 1237
BsnI GGCC 1 cut(s) 644
Bso31I GGTCTC 3 cut(s) 473, 1603, 1651
BsoBI CYCGRG 1 cut(s) 255
Bsp1286I GDGCHC 5 cut(s) 110, 234, 379, 565, 790
Bsp1407I TGTACA 1 cut(s) 1408
Bsp143I GATC 7 cut(s) 79, 295, 822, 959, 1346, 1498, 1579
BspACI CCGC 5 cut(s) 154, 322, 371, 551, 658
BspANI GGCC 1 cut(s) 644
BspCNI CTCAG 4 cut(s) 246, 589, 694, 1067
BspDI ATCGAT 1 cut(s) 1349
BspFNI CGCG 2 cut(s) 156, 324
BspHI TCATGA 2 cut(s) 306, 339
BspLI GGNNCC 4 cut(s) 376, 789, 796, 1051
BspPI GGATC 1 cut(s) 303
BspQI GCTCTTC 1 cut(s) 222
BspT107I GGYRCC 1 cut(s) 787
BspTI CTTAAG 1 cut(s) 911
BspTNI GGTCTC 3 cut(s) 473, 1603, 1651
BsrDI GCAATG 2 cut(s) 36, 663
BsrGI TGTACA 1 cut(s) 1408
BsrI ACTGG 3 cut(s) 980, 1105, 1385
BssECI CCNNGG 3 cut(s) 21, 412, 791
BssMI GATC 7 cut(s) 79, 295, 822, 959, 1346, 1498, 1579
BssNI GRCGYC 1 cut(s) 30
Bst2UI CCWGG 1 cut(s) 414
Bst4CI ACNGT 5 cut(s) 52, 769, 1251, 1392, 1564
Bst6I CTCTTC 2 cut(s) 222, 1649
BstACI GRCGYC 1 cut(s) 30
BstAFI CTTAAG 1 cut(s) 911
BstAUI TGTACA 1 cut(s) 1408
BstDEI CTNAG 6 cut(s) 233, 597, 702, 758, 1054, 1502
BstENI CCTNNNNNAGG 1 cut(s) 155
BstF5I GGATG 4 cut(s) 387, 475, 688, 1420
BstFNI CGCG 2 cut(s) 156, 324
BstKTI GATC 7 cut(s) 82, 298, 825, 962, 1349, 1501, 1582
BstMAI GTCTC 5 cut(s) 235, 473, 1603, 1627, 1651
BstMBI GATC 7 cut(s) 79, 295, 822, 959, 1346, 1498, 1579
BstMCI CGRYCG 1 cut(s) 21
BstMWI GCNNNNNNNGC 3 cut(s) 23, 658, 854
BstNI CCWGG 1 cut(s) 414
BstSCI CCNGG 3 cut(s) 377, 412, 790
BstSLI GKGCMC 1 cut(s) 790
BstUI CGCG 2 cut(s) 156, 324
BstV1I GCAGC 8 cut(s) 26, 605, 655, 748, 869, 1112, 1455, 1572
BstV2I GAAGAC 2 cut(s) 205, 545
BstX2I RGATCY 1 cut(s) 959
BstXI CCANNNNNNTGG 1 cut(s) 1006
BstYI RGATCY 1 cut(s) 959
Bsu15I ATCGAT 1 cut(s) 1349
BsuRI GGCC 1 cut(s) 644
BsuTUI ATCGAT 1 cut(s) 1349
BtsCI GGATG 4 cut(s) 387, 475, 688, 1420
BtsI GCAGTG 2 cut(s) 441, 631
BtsIMutI CAGTG 4 cut(s) 441, 631, 973, 1112
CaiI CAGNNNCTG 2 cut(s) 413, 1463
CciI TCATGA 2 cut(s) 306, 339
Cfr13I GGNCC 3 cut(s) 795, 1067, 1428
ClaI ATCGAT 1 cut(s) 1349
CseI GACGC 1 cut(s) 1346
Csp6I GTAC 2 cut(s) 1388, 1409
CviAII CATG 6 cut(s) 307, 313, 340, 1061, 1274, 1558
CviQI GTAC 2 cut(s) 1388, 1409
DdeI CTNAG 6 cut(s) 233, 597, 702, 758, 1054, 1502
DpnI GATC 7 cut(s) 81, 297, 824, 961, 1348, 1500, 1581
DpnII GATC 7 cut(s) 79, 295, 822, 959, 1346, 1498, 1579
DraI TTTAAA 1 cut(s) 1200
DriI GACNNNNNGTC 1 cut(s) 1664
Eam1104I CTCTTC 2 cut(s) 222, 1649
Eam1105I GACNNNNNGTC 1 cut(s) 1664
EarI CTCTTC 2 cut(s) 222, 1649
Ecl136II GAGCTC 1 cut(s) 232
Eco24I GRGCYC 2 cut(s) 234, 379
Eco31I GGTCTC 3 cut(s) 473, 1603, 1651
Eco32I GATATC 1 cut(s) 1455
Eco47I GGWCC 3 cut(s) 795, 1067, 1428
Eco53kI GAGCTC 1 cut(s) 232
Eco57I CTGAAG 1 cut(s) 695
Eco88I CYCGRG 1 cut(s) 255
EcoICRI GAGCTC 1 cut(s) 232
EcoNI CCTNNNNNAGG 1 cut(s) 155
EcoRII CCWGG 1 cut(s) 412
EcoRV GATATC 1 cut(s) 1455
EcoT22I ATGCAT 2 cut(s) 1523, 1575
EcoT38I GRGCYC 2 cut(s) 234, 379
FaeI CATG 6 cut(s) 310, 316, 343, 1064, 1277, 1561
FaqI GGGAC 4 cut(s) 115, 808, 843, 1237
FatI CATG 6 cut(s) 306, 312, 339, 1060, 1273, 1557
FauI CCCGC 1 cut(s) 364
FauNDI CATATG 1 cut(s) 1405
FbaI TGATCA 1 cut(s) 79
FokI GGATG 4 cut(s) 394, 482, 695, 1427
FriOI GRGCYC 2 cut(s) 234, 379
FspBI CTAG 5 cut(s) 119, 750, 849, 1097, 1256
GsuI CTGGAG 2 cut(s) 390, 449
HaeIII GGCC 1 cut(s) 644
HapII CCGG 3 cut(s) 379, 566, 791
HgaI GACGC 1 cut(s) 1346
Hin1I GRCGYC 1 cut(s) 30
Hin1II CATG 6 cut(s) 310, 316, 343, 1064, 1277, 1561
HindIII AAGCTT 1 cut(s) 1220
HinfI GANTC 9 cut(s) 185, 201, 258, 457, 715, 836, 862, 877, 1541
HpaII CCGG 3 cut(s) 379, 566, 791
HphI GGTGA 2 cut(s) 580, 998
Hpy166II GTNNAC 1 cut(s) 755
Hpy188III TCNNGA 5 cut(s) 262, 307, 340, 407, 428
Hpy8I GTNNAC 1 cut(s) 755
Hpy99I CGWCG 1 cut(s) 35
HpyAV CCTTC 4 cut(s) 756, 876, 1468, 1563
HpyCH4III ACNGT 5 cut(s) 52, 769, 1251, 1392, 1564
HpyCH4IV ACGT 2 cut(s) 30, 899
HpyF10VI GCNNNNNNNGC 3 cut(s) 23, 658, 854
HpyF3I CTNAG 6 cut(s) 233, 597, 702, 758, 1054, 1502
HpySE526I ACGT 2 cut(s) 30, 899
Hsp92I GRCGYC 1 cut(s) 30
Hsp92II CATG 6 cut(s) 310, 316, 343, 1064, 1277, 1561
Ksp22I TGATCA 1 cut(s) 79
Kzo9I GATC 7 cut(s) 79, 295, 822, 959, 1346, 1498, 1579
LguI GCTCTTC 1 cut(s) 222
LmnI GCTCC 8 cut(s) 112, 283, 374, 568, 706, 733, 1001, 1049
Lsp1109I GCAGC 8 cut(s) 26, 605, 655, 748, 869, 1112, 1455, 1572
LweI GCATC 6 cut(s) 124, 410, 688, 1405, 1450, 1530
MaeI CTAG 5 cut(s) 119, 750, 849, 1097, 1256
MaeII ACGT 2 cut(s) 30, 899
MaeIII GTNAC 1 cut(s) 1019
MalI GATC 7 cut(s) 81, 297, 824, 961, 1348, 1500, 1581
MboI GATC 7 cut(s) 79, 295, 822, 959, 1346, 1498, 1579
MflI RGATCY 1 cut(s) 959
MhlI GDGCHC 5 cut(s) 110, 234, 379, 565, 790
MlyI GAGTC 5 cut(s) 195, 267, 724, 856, 1550
MmeI TCCRAC 2 cut(s) 162, 1045
Mph1103I ATGCAT 2 cut(s) 1523, 1575
MroXI GAANNNNTTC 1 cut(s) 1234
MseI TTAA 8 cut(s) 819, 912, 965, 1199, 1367, 1397, 1448, 1632
MslI CAYNNNNRTG 1 cut(s) 311
MspA1I CMGCKG 4 cut(s) 596, 739, 1127, 1585
MspCI CTTAAG 1 cut(s) 911
MspI CCGG 3 cut(s) 379, 566, 791
MspR9I CCNGG 3 cut(s) 379, 414, 792
MvaI CCWGG 1 cut(s) 414
MvnI CGCG 2 cut(s) 156, 324
MwoI GCNNNNNNNGC 3 cut(s) 23, 658, 854
NciI CCSGG 2 cut(s) 379, 792
NdeI CATATG 1 cut(s) 1405
NdeII GATC 7 cut(s) 79, 295, 822, 959, 1346, 1498, 1579
NlaIII CATG 6 cut(s) 310, 316, 343, 1064, 1277, 1561
NlaIV GGNNCC 4 cut(s) 376, 789, 796, 1051
NsiI ATGCAT 2 cut(s) 1523, 1575
PaeR7I CTCGAG 1 cut(s) 255
PagI TCATGA 2 cut(s) 306, 339
PciSI GCTCTTC 1 cut(s) 222
PcsI WCGNNNNNNNCGW 1 cut(s) 18
PdmI GAANNNNTTC 1 cut(s) 1234
PfeI GAWTC 4 cut(s) 185, 457, 836, 877
PflFI GACNNNGTC 1 cut(s) 544
PflMI CCANNNNNTGG 1 cut(s) 413
PleI GAGTC 5 cut(s) 195, 266, 723, 856, 1549
PpsI GAGTC 5 cut(s) 195, 266, 723, 856, 1549
Psp124BI GAGCTC 1 cut(s) 234
Psp6I CCWGG 1 cut(s) 412
PspGI CCWGG 1 cut(s) 412
PspN4I GGNNCC 4 cut(s) 376, 789, 796, 1051
PspPI GGNCC 3 cut(s) 795, 1067, 1428
PspXI VCTCGAGB 1 cut(s) 255
PstNI CAGNNNCTG 2 cut(s) 413, 1463
PsuI RGATCY 1 cut(s) 959
PsyI GACNNNGTC 1 cut(s) 544
PvuII CAGCTG 4 cut(s) 596, 739, 1127, 1585
RsaI GTAC 2 cut(s) 1389, 1410
RsaNI GTAC 2 cut(s) 1388, 1409
RseI CAYNNNNRTG 1 cut(s) 311
SacI GAGCTC 1 cut(s) 234
SapI GCTCTTC 1 cut(s) 222
SaqAI TTAA 8 cut(s) 819, 912, 965, 1199, 1367, 1397, 1448, 1632
Sau3AI GATC 7 cut(s) 79, 295, 822, 959, 1346, 1498, 1579
Sau96I GGNCC 3 cut(s) 795, 1067, 1428
SchI GAGTC 5 cut(s) 195, 267, 724, 856, 1550
ScrFI CCNGG 3 cut(s) 379, 414, 792
SduI GDGCHC 5 cut(s) 110, 234, 379, 565, 790
SfaNI GCATC 6 cut(s) 124, 410, 688, 1405, 1450, 1530
Sfr274I CTCGAG 1 cut(s) 255
SinI GGWCC 3 cut(s) 795, 1067, 1428
SlaI CTCGAG 1 cut(s) 255
SmiMI CAYNNNNRTG 1 cut(s) 311
SmlI CTYRAG 4 cut(s) 255, 911, 1538, 1595
SmoI CTYRAG 4 cut(s) 255, 911, 1538, 1595
SsiI CCGC 5 cut(s) 154, 322, 371, 551, 658
SspMI CTAG 5 cut(s) 119, 750, 849, 1097, 1256
SstI GAGCTC 1 cut(s) 234
StyD4I CCNGG 3 cut(s) 377, 412, 790
TaaI ACNGT 5 cut(s) 52, 769, 1251, 1392, 1564
TaiI ACGT 2 cut(s) 33, 902
TaqI TCGA 9 cut(s) 6, 125, 225, 249, 256, 397, 825, 1016, 1349
TaqII GACCGA 2 cut(s) 35, 497
TatI WGTACW 1 cut(s) 1408
TauI GCSGC 3 cut(s) 324, 553, 661
TfiI GAWTC 4 cut(s) 185, 457, 836, 877
Tru1I TTAA 8 cut(s) 819, 912, 965, 1199, 1367, 1397, 1448, 1632
Tru9I TTAA 8 cut(s) 819, 912, 965, 1199, 1367, 1397, 1448, 1632
TscAI CASTG 4 cut(s) 441, 631, 980, 1112
TseI GCWGC 8 cut(s) 14, 593, 668, 736, 857, 1100, 1443, 1585
TspDTI ATGAA 3 cut(s) 323, 328, 356
TspGWI ACGGA 2 cut(s) 125, 281
TspRI CASTG 4 cut(s) 441, 631, 980, 1112
Tth111I GACNNNGTC 1 cut(s) 544
Van91I CCANNNNNTGG 1 cut(s) 413
Vha464I CTTAAG 1 cut(s) 911
VpaK11BI GGWCC 3 cut(s) 795, 1067, 1428
XagI CCTNNNNNAGG 1 cut(s) 155
XapI RAATTY 2 cut(s) 1036, 1150
XhoI CTCGAG 1 cut(s) 255
XmnI GAANNNNTTC 1 cut(s) 1234
XspI CTAG 5 cut(s) 119, 750, 849, 1097, 1256
ZraI GACGTC 1 cut(s) 31
Zsp2I ATGCAT 2 cut(s) 1523, 1575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.