RchiOBHm_Chr7g0205851

FRIGIDA-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000126
Physical Location & Seq
Forward (+)
23593795 .. 23598365
4571 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18419

Sequence Viewer

Length: 2466 bp
ATGGAATTGGAAGAGAAGAGCAAGAAAGAGTGTGGTTTGGACCAGAACTCGATTGAGCAAAGTGAGAAAGAGATGGAGTTGAAAAGAGGGGAGCTTGATTCAAATCGGAAATCGATGGCTGAATGTTCTGATACAGTTGAATTGAGAGAGGGAAAGATGAGGGAAATGTGTGGAGGTTTTAGTTTGCTTAAGAAGTCGATGGAGGAGTGGTGCTGTAAGGTTGAATTGAAAGAGAGGGGGATTGAGGAGTGTGTTGCCAAGCTTGAATTGAAGGAGAAACAAGTTGAATCGAGATTTGAGGAGCTTAATGTGATTGATAAGAGGGTTAATGAGTGCCTTGGTGATGCTCAGTTGAAAGAAAAGCAGTTGGATTCTGTTATGAAGTTAATACAAGAAGACAAACAGCATTTGGATTGGCTCCAAAAGTCGGTGGAAGAGCATGAAAAAAAGTTGGGTTTGGTATCAAATGGACTTCAAGGAAAGGCGAGGGAACTTGAAGTGCAACAACAACAAATTGATTCAGTCTACCATGTGTTACAGATGAAAGAGAATGAACTTGAACAGCAGGCCCAAGAGCTTGATTTGAAACGCCAGCAATATGAGTCACTTTGCCATCTGTTTCAGATCAAAGAGGGTCAACTTGAAAAGCAATCCAACGATCTTGAATTGAAACACAAACAAATTGAATCCATCCACCATCTGATTCAAATTAAAGAGTCGCAACTTGAAAATCGAGCCAAGGAGCTTGGATTCAAACAGCAACAAAATGATTCAATCTCTCAACTACTTAAGATGAAAGAAAGGGAACTTGAACAGCAGGAAAAAGAGCTTGAACCCAAACAACAGCAAATTGTTTCGGTTTCGCAGACACTTCAGATGAAAGAGAGGAAACTTGAACAACAGGCAAAAGAGCTTGACTTGAAGCAAAAACAATATGATTCTCAGGTGAAGATGGTCCAGTTGATACATGCACCTGCTGCTAACAATGCCACTATTCCTTCATCTGCAACTGATGAATCCAGGTCCAGCATCAATATAGATGGTCGAGGCTTGCAGTTTTTTATGTATGAACAATTGAAGAAAATTGATTCAATGCGTGCCCAAATGTCGGCTGCTTTTCAAGTGTCATCAGACCCTGGAAATTTGGTTTTGGATGCAATGCAAGGATTTTACCCTTCAAATTCAAATATGGGAAAGAGGGAGACTGATTTTGATCTGAGCTTTATTAGAAGAAGTTGTATTCTTCTGTTACAGGAGTTAAAGAGGATGTCACCACAACTTAATCCTGGGGTAAGAGAAAAAGCATTGAAGTTGGCAGCTCATTGGAAGGCCAAGTTGACAGTGGCCACTGATAATTCGTTGGAGGTTTTGGGATTTTTGCGGCTTGTAACTGCGTTTGAATTAACCTCTGCTTATGATGCCAATGAGCTTCAGAGTCTTCTTTCTGTAGTTATTCAGCCCGAACAAGCAGCTCAATTAAGAAAGGCTCTCGGTGTCAAAGATAAGGAACCTTCAACCAACAGCATTTCTCCCCTAGTCAAAGTGGTGGAACCAGCATCTACCAATGCAGCAACCTTTCCTTCTTCAAATATTCAACCAAATGTCACTAAGGATGCAGGGAATGTGTCGGGGTTTGGAAATAAGCCTTTAAGTGGGAATCATTCTATACTGGCTGCTTCTGTTCCATTGTCATCAGACCCAGCTAAACTCGTGTTGGATAGCATCCAAAAATCTCTTGCTGAATACTTGCGAAATGGAGATTGTGAAGAAAGTATAATGTCAAGTAACATTAGCCTATTGGAGGAGCTAATGAGAGTTTCACCAAATGTTGGACCTAATCTGAAAGCAGAAGCAACAAATCTATCAGTCCAGTGGAAAGCAAAGATGGCAGGAAATACTGAGAAGTCATTGGAGGGTGTAGGATTTTTGCTATTTTTAGCTACATATGGATTGCTTTCTACGTTAAATGCTGATGAGATTGTAAAGCATCTTGGGTTGATTTGTGACCATAAACAGGCTCTAGAATTATGCCAGGCACGTGGTTTTGCAGATAAGATTGGTGAATTTATTCGGATCCTTGTTGAAAAGAAGCAACTTATTGAGGCTGTTAGATTTATTTTCGCGTTCAAGTTAACTGACAAGCTTTCCCCAGTCCAACTTTTAAAAGAATATTTGGAGGATACAAAAAAGTGTTCTGAAGCAATTTTCATGTTGCAGATATCACAAGATGAAAAGGAGAAGGTGGCAGATGGTCTGTTAGGTGATCTAAGAGCTGTGCATCAATACATTAAGGATTACAATCTTGAGTCCAAATACCCATCTGCAGACATTGAAATGCAAATAGTTAAGCTGGAAACAGTAAAGTCTTCCCCTGCCTCCAATGTCGAACAGCAAGAGCAGAGAAAAAGGAAGAAACCTAGTGCTGGCACTTCGACCCTTGAGATCCAACCACCACAACAGGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida

Protein Analysis

821

Amino Acids

92.8

Weight (kDa)

5.65

Isoelectric Point (pI)

53.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 345 - 502 4.3e-36 Frigida-like protein
Frigida PF07899 563 - 793 5.9e-51 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04990
fragaria_vesca FvH4_5g20491 FvH4_5g20491 FvH4_5g20491 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04261 FvH4_6g04310 FvH4_6g04310 FvH4_6g04320 FvH4_6g04320 FvH4_6g04380 FvH4_6g04380 FvH4_6g04410 FvH4_6g04410 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04420 FvH4_6g04421 FvH4_6g04421 FvH4_6g04421 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04431 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04550 FvH4_6g04561 FvH4_6g04562 FvH4_7g18700
malus_domestica MD04G1214600.v1.1 MD04G1214700.v1.1 MD12G1013700.v1.1 MD12G1229200.v1.1 MD12G1229900.v1.1 MD12G1230000.v1.1 MD14G1011100.v1.1
prunus_persica Prupe.1G243600_v2.0.a1 Prupe.6G334600_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.6G334700_v2.0.a1 Prupe.7G018200_v2.0.a1
pyrus_communis pycom03g04860 pycom04g18970 pycom04g18980 pycom11g05330 pycom11g05340 pycom11g05350 pycom12g01100 pycom12g01110 pycom12g21380 pycom14g00990
rosa_chinensis RchiOBHm_Chr2g0124181 RchiOBHm_Chr3g0452971 RchiOBHm_Chr3g0452981 RchiOBHm_Chr3g0452991 RchiOBHm_Chr3g0453041 RchiOBHm_Chr3g0453051 RchiOBHm_Chr3g0453061 RchiOBHm_Chr3g0453081 RchiOBHm_Chr3g0453091 RchiOBHm_Chr4g0411451 RchiOBHm_Chr7g0205851 RchiOBHm_Chr7g0237441
rosa_laevigata RLG00000001002 RLG00000003350 RLG00000008356 RLG00000018794 RLG00000025538 RLG00000025541 RLG00000025542 RLG00000025544 RLG00000025545 RLG00000025552 RLG00000025553 RLG00000025555 RLG00000025557
rosa_multiflora Rmu_co8055994.1_g000001 Rmu_co8332235.1_g000001 Rmu_co8359511.1_g000001 Rmu_sc0000076.1_g000037 Rmu_sc0000832.1_g000001 Rmu_sc0001982.1_g000017 Rmu_sc0002843.1_g000008 Rmu_sc0002923.1_g000015 Rmu_sc0002923.1_g000020 Rmu_sc0005888.1_g000004 Rmu_sc0005888.1_g000007 Rmu_sc0005888.1_g000012 Rmu_sc0005888.1_g000013 Rmu_sc0005888.1_g000014 Rmu_sc0005888.1_g000015 Rmu_sc0007863.1_g000006 Rmu_sc0008518.1_g000002 Rmu_sc0008797.1_g000002 Rmu_sc0008797.1_g000003 Rmu_sc0008797.1_g000007 Rmu_sc0009015.1_g000007 Rmu_sc0009015.1_g000008 Rmu_sc0012369.1_g000002 Rmu_sc0013935.1_g000001 Rmu_sc0019895.1_g000001 Rmu_sc0023319.1_g000001 Rmu_sc0030229.1_g000001 Rmu_sc0033390.1_g000001 Rmu_sc0042937.1_g000001 Rmu_ssc0000052.1_g000010
rosa_roxburghii Rroxscaffold_3G00224200 Rroxscaffold_3G00251930 Rroxscaffold_5G00356050 Rroxscaffold_6G00429980 Rroxscaffold_6G00430030 Rroxscaffold_6G00430040 Rroxscaffold_6G00430070 Rroxscaffold_6G00430080 Rroxscaffold_6G00430090 Rroxscaffold_6G00430130 Rroxscaffold_6G00430140 Rroxscaffold_6G00430160
rosa_rugosa Rorug02G0250200 Rorug02G0643800 Rorug02G0643900 Rorug02G0644000 Rorug02G0644100 Rorug02G0644200 Rorug02G0644500 Rorug02G0644600 Rorug02G0644800 Rorug02G0644900 Rorug02G0645000 Rorug02G0645800 Rorug02G0645900 Rorug02G0646200 Rorug02G0646400.1 Rorug04G0108800 Rorug07G0093400 Rorug07G0303400 Rorug07G0303500 Rorug07G0303600 Rorug07G0303600 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700 Rorug07G0303700
rosa_samantha Rh2AG308300 Rh2BG317200 Rh2DG332300 Rh3AG047000 Rh3AG047100 Rh3AG047200 Rh3AG047300 Rh3AG047400 Rh3AG048600 Rh3AG048700 Rh3AG048900 Rh3AG049000 Rh3BG049400 Rh3BG049500 Rh3BG049600 Rh3BG049700 Rh3BG049900 Rh3BG050200 Rh3CG048100 Rh3CG048200 Rh3CG048400 Rh3CG048500 Rh3CG048700 Rh3CG049800 Rh3CG049900 Rh3CG050200 Rh3CG050300 Rh3DG049000 Rh3DG049100 Rh3DG049300 Rh3DG049400 Rh3DG049500 Rh3DG050600 Rh3DG050700 Rh3DG050900 Rh3DG051000 Rh4AG168200 Rh4BG165100 Rh4CG179700 Rh4DG162700 Rh5BG257600 Rh7AG225000 Rh7AG460700 Rh7BG220200 Rh7BG430500 Rh7CG238600 Rh7CG477900 Rh7DG047500 Rh7DG231700 Rh7DG447300
rosa_wichuraiana Rw2G005470 Rw2G024840 Rw3G003690 Rw3G003700 Rw3G003710 Rw3G003740 Rw3G003750 Rw4G013890 Rw4G013980 Rw7G019410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 982
Acc36I ACCTGC 1 cut(s) 982
AccB7I CCANNNNNTGG 1 cut(s) 1829
AccI GTMKAC 1 cut(s) 525
AccII CGCG 1 cut(s) 2123
AciI CCGC 1 cut(s) 1381
AclWI GGATC 3 cut(s) 2068, 2081, 2437
AcoI YGGCCR 1 cut(s) 1344
AcsI RAATTY 3 cut(s) 1141, 1180, 2063
AcuI CTGAAG 3 cut(s) 857, 1415, 2217
AcvI CACGTG 1 cut(s) 2039
AfiI CCNNNNNNNGG 7 cut(s) 427, 1108, 1652, 1801, 1829, 2014, 2423
AflII CTTAAG 2 cut(s) 188, 788
AjnI CCWGG 4 cut(s) 1019, 1135, 1285, 2031
Alw26I GTCTC 1 cut(s) 1196
AlwI GGATC 3 cut(s) 2068, 2081, 2437
AlwNI CAGNNNCTG 1 cut(s) 1136
AoxI GGCC 4 cut(s) 567, 1329, 1344, 2460
ApeKI GCWGC 6 cut(s) 977, 1112, 1316, 1469, 1568, 1673
ApoI RAATTY 3 cut(s) 1141, 1180, 2063
Asp700I GAANNNNTTC 1 cut(s) 2067
AspS9I GGNCC 5 cut(s) 40, 568, 955, 1023, 1832
AsuHPI GGTGA 6 cut(s) 353, 958, 1263, 1812, 2072, 2273
AvaII GGWCC 4 cut(s) 40, 955, 1023, 1832
BaeGI GKGCMC 1 cut(s) 1102
BalI TGGCCA 1 cut(s) 1346
BamHI GGATCC 1 cut(s) 2073
BauI CACGAG 1 cut(s) 1709
BbrPI CACGTG 1 cut(s) 2039
BbsI GAAGAC 3 cut(s) 402, 1430, 2358
BbvI GCAGC 6 cut(s) 964, 1099, 1328, 1481, 1580, 1660
BciT130I CCWGG 4 cut(s) 1021, 1137, 1287, 2033
BciVI GTATCC 1 cut(s) 2173
BcoDI GTCTC 1 cut(s) 1196
BfaI CTAG 3 cut(s) 1535, 2021, 2418
BfmI CTRYAG 2 cut(s) 1446, 2322
BfrI CTTAAG 2 cut(s) 188, 788
BfuAI ACCTGC 1 cut(s) 982
BfuI GTATCC 1 cut(s) 2173
BisI GCNGC 7 cut(s) 978, 1113, 1317, 1382, 1470, 1569, 1674
BlsI GCNGC 7 cut(s) 979, 1114, 1318, 1383, 1471, 1570, 1675
Bme1390I CCNGG 4 cut(s) 1021, 1137, 1287, 2033
Bme18I GGWCC 4 cut(s) 40, 955, 1023, 1832
BmgT120I GGNCC 5 cut(s) 40, 568, 955, 1023, 1832
BmiI GGNNCC 4 cut(s) 419, 1509, 1551, 2075
BmrFI CCNGG 4 cut(s) 1021, 1137, 1287, 2033
BmrI ACTGGG 1 cut(s) 2144
BmsI GCATC 9 cut(s) 334, 1038, 1144, 1408, 1565, 1603, 1731, 1996, 2287
BmuI ACTGGG 1 cut(s) 2144
BpiI GAAGAC 3 cut(s) 402, 1430, 2358
BpuEI CTTGAG 2 cut(s) 2324, 2459
Bsa29I ATCGAT 1 cut(s) 113
BsaAI YACGTR 1 cut(s) 2039
BsaBI GATNNNNATC 3 cut(s) 102, 1212, 2298
BsaJI CCNNGG 4 cut(s) 337, 738, 1135, 1286
BsaXI ACNNNNNCTCC 2 cut(s) 194, 224
Bsc4I CCNNNNNNNGG 7 cut(s) 427, 1108, 1652, 1801, 1829, 2014, 2423
Bse1I ACTGG 4 cut(s) 958, 1674, 1870, 2150
Bse3DI GCAATG 1 cut(s) 1164
Bse8I GATNNNNATC 3 cut(s) 102, 1212, 2298
BseBI CCWGG 4 cut(s) 1021, 1137, 1287, 2033
BseCI ATCGAT 1 cut(s) 113
BseDI CCNNGG 4 cut(s) 337, 738, 1135, 1286
BseGI GGATG 5 cut(s) 690, 1159, 1272, 1618, 1722
BseJI GATNNNNATC 3 cut(s) 102, 1212, 2298
BseLI CCNNNNNNNGG 7 cut(s) 427, 1108, 1652, 1801, 1829, 2014, 2423
BseMI GCAATG 1 cut(s) 1164
BseMII CTCAG 4 cut(s) 362, 956, 1208, 1890
BseNI ACTGG 4 cut(s) 958, 1674, 1870, 2150
BseRI GAGGAG 4 cut(s) 218, 260, 314, 1817
BseSI GKGCMC 1 cut(s) 1102
BseXI GCAGC 6 cut(s) 964, 1099, 1328, 1481, 1580, 1660
BseYI CCCAGC 1 cut(s) 1699
Bsh1236I CGCG 1 cut(s) 2123
BshFI GGCC 4 cut(s) 569, 1331, 1346, 2462
BshVI ATCGAT 1 cut(s) 113
BslI CCNNNNNNNGG 7 cut(s) 427, 1108, 1652, 1801, 1829, 2014, 2423
BsmAI GTCTC 1 cut(s) 1196
BsnI GGCC 4 cut(s) 569, 1331, 1346, 2462
Bsp1286I GDGCHC 1 cut(s) 1102
Bsp143I GATC 6 cut(s) 624, 658, 1213, 2073, 2263, 2442
BspACI CCGC 1 cut(s) 1381
BspANI GGCC 4 cut(s) 569, 1331, 1346, 2462
BspCNI CTCAG 4 cut(s) 361, 955, 1209, 1891
BspDI ATCGAT 1 cut(s) 113
BspFNI CGCG 1 cut(s) 2123
BspLI GGNNCC 4 cut(s) 419, 1509, 1551, 2075
BspMAI CTGCAG 1 cut(s) 2326
BspMI ACCTGC 1 cut(s) 982
BspPI GGATC 3 cut(s) 2068, 2081, 2437
BspQI GCTCTTC 2 cut(s) 11, 429
BspTI CTTAAG 2 cut(s) 188, 788
BsrDI GCAATG 1 cut(s) 1164
BsrI ACTGG 4 cut(s) 958, 1674, 1870, 2150
BssECI CCNNGG 4 cut(s) 337, 738, 1135, 1286
BssMI GATC 6 cut(s) 624, 658, 1213, 2073, 2263, 2442
BssSI CACGAG 1 cut(s) 1709
BssT1I CCWWGG 2 cut(s) 337, 738
Bst2BI CACGAG 1 cut(s) 1709
Bst2UI CCWGG 4 cut(s) 1021, 1137, 1287, 2033
Bst4CI ACNGT 3 cut(s) 136, 1342, 2359
Bst6I CTCTTC 3 cut(s) 6, 11, 429
BstAFI CTTAAG 2 cut(s) 188, 788
BstAPI GCANNNNNTGC 1 cut(s) 977
BstBAI YACGTR 1 cut(s) 2039
BstC8I GCNNGC 5 cut(s) 567, 593, 1052, 1098, 2425
BstDEI CTNAG 6 cut(s) 348, 942, 1217, 1608, 1899, 2267
BstENI CCTNNNNNAGG 1 cut(s) 1799
BstF5I GGATG 5 cut(s) 690, 1159, 1272, 1618, 1722
BstFNI CGCG 1 cut(s) 2123
BstKTI GATC 6 cut(s) 627, 661, 1216, 2076, 2266, 2445
BstMAI GTCTC 1 cut(s) 1196
BstMBI GATC 6 cut(s) 624, 658, 1213, 2073, 2263, 2442
BstMWI GCNNNNNNNGC 4 cut(s) 977, 986, 1418, 1886
BstNI CCWGG 4 cut(s) 1021, 1137, 1287, 2033
BstNSI RCATGY 1 cut(s) 971
BstSCI CCNGG 4 cut(s) 1019, 1135, 1285, 2031
BstSFI CTRYAG 2 cut(s) 1446, 2322
BstSLI GKGCMC 1 cut(s) 1102
BstUI CGCG 1 cut(s) 2123
BstV1I GCAGC 6 cut(s) 964, 1099, 1328, 1481, 1580, 1660
BstV2I GAAGAC 3 cut(s) 402, 1430, 2358
BstX2I RGATCY 2 cut(s) 2073, 2442
BstXI CCANNNNNNTGG 1 cut(s) 2039
BstYI RGATCY 2 cut(s) 2073, 2442
Bsu15I ATCGAT 1 cut(s) 113
BsuI GTATCC 1 cut(s) 2173
BsuRI GGCC 4 cut(s) 569, 1331, 1346, 2462
BsuTUI ATCGAT 1 cut(s) 113
BtsCI GGATG 5 cut(s) 690, 1159, 1272, 1618, 1722
BtsIMutI CAGTG 3 cut(s) 1347, 1347, 1877
BveI ACCTGC 1 cut(s) 982
Cac8I GCNNGC 5 cut(s) 567, 593, 1052, 1098, 2425
CaiI CAGNNNCTG 1 cut(s) 1136
Cfr13I GGNCC 5 cut(s) 40, 568, 955, 1023, 1832
ClaI ATCGAT 1 cut(s) 113
CviAII CATG 4 cut(s) 440, 530, 968, 2209
DdeI CTNAG 6 cut(s) 348, 942, 1217, 1608, 1899, 2267
DpnI GATC 6 cut(s) 626, 660, 1215, 2075, 2265, 2444
DpnII GATC 6 cut(s) 624, 658, 1213, 2073, 2263, 2442
DraI TTTAAA 1 cut(s) 2163
EaeI YGGCCR 1 cut(s) 1344
Eam1104I CTCTTC 3 cut(s) 6, 11, 429
EarI CTCTTC 3 cut(s) 6, 11, 429
Eco130I CCWWGG 2 cut(s) 337, 738
Eco147I AGGCCT 1 cut(s) 2462
Eco32I GATATC 1 cut(s) 2220
Eco47I GGWCC 4 cut(s) 40, 955, 1023, 1832
Eco57I CTGAAG 3 cut(s) 857, 1415, 2217
Eco72I CACGTG 1 cut(s) 2039
EcoNI CCTNNNNNAGG 1 cut(s) 1799
EcoRII CCWGG 4 cut(s) 1019, 1135, 1285, 2031
EcoRV GATATC 1 cut(s) 2220
EcoT14I CCWWGG 2 cut(s) 337, 738
ErhI CCWWGG 2 cut(s) 337, 738
FaeI CATG 4 cut(s) 443, 533, 971, 2212
FatI CATG 4 cut(s) 439, 529, 967, 2208
FauNDI CATATG 1 cut(s) 1945
FblI GTMKAC 1 cut(s) 525
Fnu4HI GCNGC 7 cut(s) 978, 1113, 1317, 1382, 1470, 1569, 1674
FokI GGATG 5 cut(s) 677, 1166, 1279, 1625, 1709
Fsp4HI GCNGC 7 cut(s) 978, 1113, 1317, 1382, 1470, 1569, 1674
FspBI CTAG 3 cut(s) 1535, 2021, 2418
GluI GCNGC 7 cut(s) 978, 1113, 1317, 1382, 1470, 1569, 1674
GsaI CCCAGC 1 cut(s) 1703
HaeIII GGCC 4 cut(s) 569, 1331, 1346, 2462
Hin1II CATG 4 cut(s) 443, 533, 971, 2212
HincII GTYRAC 3 cut(s) 638, 1338, 2133
HindII GTYRAC 3 cut(s) 638, 1338, 2133
HindIII AAGCTT 2 cut(s) 260, 2141
HpaI GTTAAC 1 cut(s) 2133
HphI GGTGA 6 cut(s) 353, 958, 1263, 1812, 2072, 2273
Hpy166II GTNNAC 4 cut(s) 526, 638, 1338, 2133
Hpy188III TCNNGA 4 cut(s) 291, 662, 2021, 2303
Hpy8I GTNNAC 4 cut(s) 526, 638, 1338, 2133
HpyAV CCTTC 7 cut(s) 265, 1008, 1185, 1321, 1521, 1590, 2233
HpyCH4III ACNGT 3 cut(s) 136, 1342, 2359
HpyCH4IV ACGT 2 cut(s) 1961, 2038
HpyF10VI GCNNNNNNNGC 4 cut(s) 977, 986, 1418, 1886
HpyF3I CTNAG 6 cut(s) 348, 942, 1217, 1608, 1899, 2267
HpySE526I ACGT 2 cut(s) 1961, 2038
Hsp92II CATG 4 cut(s) 443, 533, 971, 2212
KspAI GTTAAC 1 cut(s) 2133
Kzo9I GATC 6 cut(s) 624, 658, 1213, 2073, 2263, 2442
LguI GCTCTTC 2 cut(s) 11, 429
LmnI GCTCC 5 cut(s) 91, 301, 423, 742, 1804
Lsp1109I GCAGC 6 cut(s) 964, 1099, 1328, 1481, 1580, 1660
LweI GCATC 9 cut(s) 334, 1038, 1144, 1408, 1565, 1603, 1731, 1996, 2287
MaeI CTAG 3 cut(s) 1535, 2021, 2418
MaeII ACGT 2 cut(s) 1961, 2038
MaeIII GTNAC 8 cut(s) 534, 603, 1248, 1269, 1387, 1603, 1784, 2003
MalI GATC 6 cut(s) 626, 660, 1215, 2075, 2265, 2444
MboI GATC 6 cut(s) 624, 658, 1213, 2073, 2263, 2442
MfeI CAATTG 1 cut(s) 1073
MflI RGATCY 2 cut(s) 2073, 2442
MhlI GDGCHC 1 cut(s) 1102
MlsI TGGCCA 1 cut(s) 1346
MluNI TGGCCA 1 cut(s) 1346
MlyI GAGTC 4 cut(s) 611, 725, 1444, 2315
MmeI TCCRAC 6 cut(s) 348, 678, 1341, 1695, 1810, 2179
Mox20I TGGCCA 1 cut(s) 1346
MroXI GAANNNNTTC 1 cut(s) 2067
MscI TGGCCA 1 cut(s) 1346
MslI CAYNNNNRTG 1 cut(s) 2333
Msp20I TGGCCA 1 cut(s) 1346
MspCI CTTAAG 2 cut(s) 188, 788
MspR9I CCNGG 4 cut(s) 1021, 1137, 1287, 2033
MunI CAATTG 1 cut(s) 1073
MvaI CCWGG 4 cut(s) 1021, 1137, 1287, 2033
MvnI CGCG 1 cut(s) 2123
MwoI GCNNNNNNNGC 4 cut(s) 977, 986, 1418, 1886
NdeI CATATG 1 cut(s) 1945
NdeII GATC 6 cut(s) 624, 658, 1213, 2073, 2263, 2442
NlaIII CATG 4 cut(s) 443, 533, 971, 2212
NlaIV GGNNCC 4 cut(s) 419, 1509, 1551, 2075
NmuCI GTSAC 4 cut(s) 603, 1269, 1603, 2003
NspI RCATGY 1 cut(s) 971
PaqCI CACCTGC 1 cut(s) 982
PceI AGGCCT 1 cut(s) 2462
PciSI GCTCTTC 2 cut(s) 11, 429
PdmI GAANNNNTTC 1 cut(s) 2067
PflMI CCANNNNNTGG 1 cut(s) 1829
PkrI GCNGC 7 cut(s) 979, 1114, 1318, 1383, 1471, 1570, 1675
PleI GAGTC 4 cut(s) 610, 724, 1443, 2314
PmaCI CACGTG 1 cut(s) 2039
PmlI CACGTG 1 cut(s) 2039
PpsI GAGTC 4 cut(s) 610, 724, 1443, 2314
Ppu21I YACGTR 1 cut(s) 2039
Psp6I CCWGG 4 cut(s) 1019, 1135, 1285, 2031
PspCI CACGTG 1 cut(s) 2039
PspFI CCCAGC 1 cut(s) 1699
PspGI CCWGG 4 cut(s) 1019, 1135, 1285, 2031
PspN4I GGNNCC 4 cut(s) 419, 1509, 1551, 2075
PspPI GGNCC 5 cut(s) 40, 568, 955, 1023, 1832
PstI CTGCAG 1 cut(s) 2326
PstNI CAGNNNCTG 1 cut(s) 1136
PsuI RGATCY 2 cut(s) 2073, 2442
RseI CAYNNNNRTG 1 cut(s) 2333
SapI GCTCTTC 2 cut(s) 11, 429
SatI GCNGC 7 cut(s) 978, 1113, 1317, 1382, 1470, 1569, 1674
Sau3AI GATC 6 cut(s) 624, 658, 1213, 2073, 2263, 2442
Sau96I GGNCC 5 cut(s) 40, 568, 955, 1023, 1832
SchI GAGTC 4 cut(s) 611, 725, 1444, 2315
ScrFI CCNGG 4 cut(s) 1021, 1137, 1287, 2033
SduI GDGCHC 1 cut(s) 1102
SfaNI GCATC 9 cut(s) 334, 1038, 1144, 1408, 1565, 1603, 1731, 1996, 2287
SfcI CTRYAG 2 cut(s) 1446, 2322
SinI GGWCC 4 cut(s) 40, 955, 1023, 1832
SmiMI CAYNNNNRTG 1 cut(s) 2333
SmlI CTYRAG 4 cut(s) 188, 788, 2303, 2438
SmoI CTYRAG 4 cut(s) 188, 788, 2303, 2438
SseBI AGGCCT 1 cut(s) 2462
SsiI CCGC 1 cut(s) 1381
SspI AATATT 2 cut(s) 1591, 2171
SspMI CTAG 3 cut(s) 1535, 2021, 2418
StuI AGGCCT 1 cut(s) 2462
StyD4I CCNGG 4 cut(s) 1019, 1135, 1285, 2031
StyI CCWWGG 2 cut(s) 337, 738
TaaI ACNGT 3 cut(s) 136, 1342, 2359
TaiI ACGT 2 cut(s) 1964, 2041
TaqI TCGA 8 cut(s) 50, 113, 197, 290, 733, 1045, 2385, 2432
TauI GCSGC 1 cut(s) 1384
TscAI CASTG 3 cut(s) 1347, 1354, 1877
TseFI GTSAC 4 cut(s) 603, 1269, 1603, 2003
TseI GCWGC 6 cut(s) 977, 1112, 1316, 1469, 1568, 1673
Tsp45I GTSAC 4 cut(s) 603, 1269, 1603, 2003
TspRI CASTG 3 cut(s) 1347, 1354, 1877
Van91I CCANNNNNTGG 1 cut(s) 1829
Vha464I CTTAAG 2 cut(s) 188, 788
VpaK11BI GGWCC 4 cut(s) 40, 955, 1023, 1832
XagI CCTNNNNNAGG 1 cut(s) 1799
XapI RAATTY 3 cut(s) 1141, 1180, 2063
XbaI TCTAGA 1 cut(s) 2020
XceI RCATGY 1 cut(s) 971
XcmI CCANNNNNNNNNTGG 1 cut(s) 1339
XmiI GTMKAC 1 cut(s) 525
XmnI GAANNNNTTC 1 cut(s) 2067
XspI CTAG 3 cut(s) 1535, 2021, 2418
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.