Rw3G003770

FRIGIDA-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0005538
Physical Location & Seq
Forward (+)
3252050 .. 3256019
3970 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G003770.1

Sequence Viewer

Length: 3234 bp
ATGGAGAAGACGACCGTGGATTCGAAGCTGAAAGAATACGAGACCATTTTCGGCAAAAAGTTCGAGACATTTCAATCCCAGGCGGCCTCCCTCGTCCACCTGACCAACCAATACAAGGAGCTCCAGGCCCGGTTCGACTCCGCCCAGAACGACCTCCGGACCCGGTTCCGCGAGCTCAAGGACCGGGAGAACCAAATCGGACTCAAAGAGAAGGAGGCCGAACAATCGAGTAAGAGCCAATTGCTTTCCTTGAAATCTTTGATTAAGAAACACGTTGATAAGCTTGATGTGTTGAGCGAGAGGGTTAGGGAGAAGAGGGAGGTGTGTGAGGTCACCGAAAGCCGGGTTTCGGAGAGGACGAAGGAGTTGAGTTGGGTTGAGAGATGTGTGCTTGACAAGAGGAGAGAGGCTGAGGAGTGTAAGAGAGAGTGTGATAATCTGAAACAAAGGTGCATTGATGAGTGTGAGAAAGAGATGGAATTGAAAAGGGAGATGGATTTGAGAGCGAAAGAGTCAATGGAGGAGTGGCGTTGTAGGCTTGAATTGAAAGAGAGGGAGCTAGAAGGGTTGTTTGACAAGTTTGAATTGAGAGGCCAAGAGTTACTTGAGCCAAATGTCGAGGAGATTCGTGTTATTGATAAGAGGGTGGAGGAGTGCATCAATGAGGTTGAGATTAAAGAGAGGTGTTTGGAGAGGCTTGAGAAATCAATAGAGGAACGCGAAAAGTCTGTGGATTTAGTCTCCCATGAACTGAAGATGAAAGAGGGGGAACTTGAAGAGAAGGCCAAAGAGTTTGAGTTGTTTGCTTGTCAAGTGAAGACTGAGCACTTGGAAAAAGAAAAGCATTTTGCTTCACTTGAAACATCGATGGAAGAACGAGGAAAGAACTTGGATGCACTTGAAAAATCGATACAAAAGCGCGAAAGGTATTTGGGTTTAGTTTCCCATGAACTGAAGATGAAAGAGGGGAAACTTGAAGAGAAGGCTAGGGAGTTTGAATTGTTTGCTTCTCAAGTGAAGACTGAGCAGCTGGAAAAAGAAAAGAACTTTGCTTCACTTGAAAAATCGATGGAAGAACGAGAGAAGATGAAGATGAAAGAGGGGAAACTTGAAGAGAAGGCTAGGGAGTTTGAATTGTTTGCTTCTCAAGTGAAGACTGAGCAGCTGGAAAAAGAAAAGAACTTTGCTTCACTTGAAAAATCGATGGAAGAACGAGAGAAGACCTTGGATACACTTGAAAAATCGATACAAGAGCGCAAAAAGTCTTTGGATTCAGTCTCATATGAACTGAAGATGAAGGAGGGAAAACTTGAAGAGAAGGCTAAAGAGTTTGAAATGTTTGCTTCTCAAGTGAAGACTGAGCAGTTGGAAAGAGAAGAGCATTTTGCTTCACTTGAAAAATCGATGGAAGAACGAGAGAAGACAATGGATGCACTTGAAAAATCGATACAAGAGCGTGAAAAGTCTTTGGATTCAGTCTCATATGAACTGAAGATGAAAGAGGGGAAACTTGAAGAGAAGGCTAAAGAGTTTGCAATGTTTGCTTCTCAAGTGAAGACTGAGCAATTGGAAAAAGAAAAGCATTTTGCTTCAGTTGAAAAATCGATGGACGATCGAGGAAAGAACTTAGATGCACTTGCAAAATCGATACAAGAGCGTGAAAGGTATTTGGGTTTAGTTTCCCATGAACTGAAGATGAAAGAGGGGAAACTTGAAGAGAAGGCTAATGAGTTTGAATTGTTTGCTTTTCAAGTGAAGACTGAGCAGCTGGAAAAAGAAAAGCACTTTGCTTCACTTGAAAAATCGATGGAAGAACGAGAGAAGACCTTGGATGCACTTGAAAAATCGATACAAGAGCGCGAAAAGTCTTTGGATTCAGTCTCCCATGAACTGAAGATGAAAGAGGGGCAGCTTGAAGAGCAAGCCAAAGAGTTTAAACTGAAGCAAATTGCATTTGCTTCTCAAGTGAAGACTGAGCAGCTGGAAAAAGAAAAGCACTTTGCTTCACTTGAAAAATCGATGGAAGAACGAGAGAAGACCTTGGATGCACTTGAAAAATCAATACAAGAGCGCGAAAAGTCTTTGGATTCAGTCTCCCATGAACTGAAGATGAAAGAGGGGCAGCTTGAAGAGCAAGCCAAAGAGTTTAAACTGAAGCAAATTGCATTTGCTTCTCAAGTGAAGACTGAGAAGTTGGAAAGAGAAGAGCATTTTGCTTCACTTGAAAAATTGATCCAAGAAAGAGAAAAGACTTTGAATTCACTCAAGAAGTCGTTCCAAGAGAGCAAAGAGCATTTGGAGAGACAACTTGAAGAGCAGGGCAGAGAGCTTCAATCAAAGCAAAAATTATTCGATTCTCAGCAAGTGGAAAGAGAAAAGCAACATGATATATTTGAAAAGTCCTTGGGAGAACGCAAAAAGCAGTTCAATGTATTCCAAAAGTCGGTTCAGGAGCAGAAAGAGCATTTGGATTCACTCTCCCATAGACTCCAGATGGAAAATAGGCAACTTGAAAAGGAGGGCAAAGAGCTTGAATTGAAGCTAAAACAACATGAATCTCAAGTGAAGGCTGACCAGTTGGCACTTACACCCACTGCTAATAATATGATTATTCCGTTTATAAGTGATCAACCCAGCATCAGTACAGATGGTAGAAGCTTGCAGTTGTTAATCGCTGAGAATTTAAACAAAGCTGAATTGGTGGGTGGCGAATTATCAGCTCTTTTAGATGCAGATGAGATTTTAAAGCTTCTTGGAATGATTTCTCAGCATAAGCAGACTTTACAGTTATGTCAGACACTTGGTTTTGAAGATAAAATCCCTGATATTATTTGGAATCTCATTGAAAGAAAGCAACTGATTGAGGCTGTTAGATTTATCTGCACCTTCAAGCTAAATGACGAGTTTCCCCCAGTACCACTCTTGATAGAATTTGTGGAGGATGCAAAGAAGTGTTGCAGTGAAATGCTCAGTGAAGTGAAATCACATGATGAAAAGGAAAAGTTTGTGGATGACCGAATAGCTGATCTAAGAGCTGTGGTTCAATGCATTGAAGACCACAGCCTCGAGTCCCAATACCAGTCAATCGACATTTTGATGGATATTCAAGGTCTTCAGAGACTAAAGGAGAATGGAAAATTGGTGCTGTCTCTTCCACCCAGTGTTGAAAAACAAAAGCAGAGAAAAGGGAGGAAACAAAGTTCCAGCACATATCAGCTGCGTAAAAGAACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
Frigida

Protein Analysis

1077

Amino Acids

127.02

Weight (kDa)

5.5

Isoelectric Point (pI)

40.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 907 - 1045 5e-34 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2621
AccII CGCG 5 cut(s) 171, 720, 921, 1860, 2073
AccIII TCCGGA 1 cut(s) 156
AciI CCGC 3 cut(s) 83, 141, 169
AclWI GGATC 1 cut(s) 2227
AcsI RAATTY 3 cut(s) 2257, 2680, 2930
AdeI CACNNNGTG 1 cut(s) 3161
AfaI GTAC 2 cut(s) 2644, 2916
AfiI CCNNNNNNNGG 4 cut(s) 115, 342, 349, 2443
AflIII ACRYGT 1 cut(s) 271
AjnI CCWGG 2 cut(s) 78, 123
AjuI GAANNNNNNNTTGG 6 cut(s) 2430, 2450, 2462, 2482, 3122, 3154
AloI GAACNNNNNNTCC 2 cut(s) 3184, 3216
Alw21I GWGCWC 3 cut(s) 123, 177, 828
AlwI GGATC 1 cut(s) 2227
Ama87I CYCGRG 1 cut(s) 3065
Aor13HI TCCGGA 1 cut(s) 156
AoxI GGCC 5 cut(s) 84, 126, 216, 592, 783
ApeKI GCWGC 7 cut(s) 1027, 1162, 1765, 1909, 1978, 2122, 3217
ApoI RAATTY 3 cut(s) 2257, 2680, 2930
ArsI GACNNNNNNTTYG 1 cut(s) 36
Asp700I GAANNNNTTC 2 cut(s) 2273, 2761
AspLEI GCGC 4 cut(s) 921, 1257, 1860, 2073
AspS9I GGNCC 3 cut(s) 127, 159, 181
AsuC2I CCSGG 4 cut(s) 130, 163, 185, 344
AsuHPI GGTGA 1 cut(s) 325
AsuII TTCGAA 1 cut(s) 23
AvaI CYCGRG 1 cut(s) 3065
AvaII GGWCC 2 cut(s) 159, 181
BanII GRGCYC 2 cut(s) 123, 177
Bbv12I GWGCWC 3 cut(s) 123, 177, 828
BbvCI CCTCAGC 1 cut(s) 411
BbvI GCAGC 7 cut(s) 1039, 1174, 1777, 1921, 1990, 2134, 3204
BcgI CGANNNNNNTGC 2 cut(s) 43, 77
BciT130I CCWGG 2 cut(s) 80, 125
BciVI GTATCC 1 cut(s) 1222
BclI TGATCA 1 cut(s) 2626
BcnI CCSGG 4 cut(s) 130, 163, 185, 344
BfaI CTAG 3 cut(s) 560, 987, 1122
BfuI GTATCC 1 cut(s) 1222
BisI GCNGC 8 cut(s) 84, 1028, 1163, 1766, 1910, 1979, 2123, 3218
BlsI GCNGC 8 cut(s) 85, 1029, 1164, 1767, 1911, 1980, 2124, 3219
Bme1390I CCNGG 6 cut(s) 80, 125, 130, 163, 185, 344
Bme18I GGWCC 2 cut(s) 159, 181
BmeT110I CYCGRG 1 cut(s) 3065
BmgT120I GGNCC 3 cut(s) 127, 159, 181
BmiI GGNNCC 2 cut(s) 161, 167
BmrFI CCNGG 6 cut(s) 80, 125, 130, 163, 185, 344
BmrI ACTGGG 2 cut(s) 2906, 3153
BmsI GCATC 9 cut(s) 666, 883, 1420, 1621, 1822, 2035, 2646, 2719, 2932
BmuI ACTGGG 2 cut(s) 2906, 3153
BpmI CTGGAG 2 cut(s) 107, 2474
Bpu10I CCTNAGC 1 cut(s) 411
Bpu14I TTCGAA 1 cut(s) 23
BpuMI CCSGG 4 cut(s) 130, 163, 185, 344
BsaI GGTCTC 1 cut(s) 35
BsaJI CCNNGG 6 cut(s) 15, 78, 1224, 1827, 2040, 2403
BsaWI WCCGGW 1 cut(s) 156
Bsc4I CCNNNNNNNGG 4 cut(s) 115, 342, 349, 2443
Bse1I ACTGG 4 cut(s) 2575, 2912, 3079, 3159
Bse3DI GCAATG 1 cut(s) 1542
BseAI TCCGGA 1 cut(s) 156
BseBI CCWGG 2 cut(s) 80, 125
BseDI CCNNGG 6 cut(s) 15, 78, 1224, 1827, 2040, 2403
BseGI GGATG 6 cut(s) 898, 1435, 1837, 2050, 2947, 3016
BseLI CCNNNNNNNGG 4 cut(s) 115, 342, 349, 2443
BseMI GCAATG 1 cut(s) 1542
BseNI ACTGG 4 cut(s) 2575, 2912, 3079, 3159
BseRI GAGGAG 5 cut(s) 415, 428, 536, 635, 665
BseXI GCAGC 7 cut(s) 1039, 1174, 1777, 1921, 1990, 2134, 3204
BseYI CCCAGC 1 cut(s) 2633
BsgI GTGCAG 1 cut(s) 2866
Bsh1236I CGCG 5 cut(s) 171, 720, 921, 1860, 2073
Bsh1285I CGRYCG 2 cut(s) 15, 1615
BshFI GGCC 5 cut(s) 86, 128, 218, 594, 785
BsiEI CGRYCG 2 cut(s) 15, 1615
BsiHKAI GWGCWC 3 cut(s) 123, 177, 828
BsiHKCI CYCGRG 1 cut(s) 3065
BsiSI CCGG 5 cut(s) 130, 157, 163, 184, 343
BslFI GGGAC 1 cut(s) 3055
BslI CCNNNNNNNGG 4 cut(s) 115, 342, 349, 2443
BsmFI GGGAC 1 cut(s) 3055
BsnI GGCC 5 cut(s) 86, 128, 218, 594, 785
Bso31I GGTCTC 1 cut(s) 35
BsoBI CYCGRG 1 cut(s) 3065
Bsp119I TTCGAA 1 cut(s) 23
Bsp1286I GDGCHC 3 cut(s) 123, 177, 828
Bsp13I TCCGGA 1 cut(s) 156
Bsp143I GATC 4 cut(s) 1612, 2232, 2626, 3025
BspACI CCGC 3 cut(s) 83, 141, 169
BspANI GGCC 5 cut(s) 86, 128, 218, 594, 785
BspEI TCCGGA 1 cut(s) 156
BspFNI CGCG 5 cut(s) 171, 720, 921, 1860, 2073
BspLI GGNNCC 2 cut(s) 161, 167
BspPI GGATC 1 cut(s) 2227
BspQI GCTCTTC 5 cut(s) 1371, 1911, 2124, 2199, 2307
BspT104I TTCGAA 1 cut(s) 23
BspTNI GGTCTC 1 cut(s) 35
BsrDI GCAATG 1 cut(s) 1542
BsrI ACTGG 4 cut(s) 2575, 2912, 3079, 3159
BssECI CCNNGG 6 cut(s) 15, 78, 1224, 1827, 2040, 2403
BssMI GATC 4 cut(s) 1612, 2232, 2626, 3025
BssT1I CCWWGG 4 cut(s) 1224, 1827, 2040, 2403
Bst2UI CCWGG 2 cut(s) 80, 125
Bst4CI ACNGT 2 cut(s) 16, 2787
BstAPI GCANNNNNTGC 1 cut(s) 1541
BstBI TTCGAA 1 cut(s) 23
BstC8I GCNNGC 4 cut(s) 173, 1923, 2136, 2660
BstDSI CCRYGG 1 cut(s) 15
BstEII GGTNACC 1 cut(s) 331
BstF5I GGATG 6 cut(s) 898, 1435, 1837, 2050, 2947, 3016
BstFNI CGCG 5 cut(s) 171, 720, 921, 1860, 2073
BstHHI GCGC 4 cut(s) 921, 1257, 1860, 2073
BstKTI GATC 4 cut(s) 1615, 2235, 2629, 3028
BstMBI GATC 4 cut(s) 1612, 2232, 2626, 3025
BstMCI CGRYCG 2 cut(s) 15, 1615
BstMWI GCNNNNNNNGC 5 cut(s) 535, 1541, 1918, 2131, 2461
BstNI CCWGG 2 cut(s) 80, 125
BstPI GGTNACC 1 cut(s) 331
BstSCI CCNGG 6 cut(s) 78, 123, 128, 161, 183, 342
BstUI CGCG 5 cut(s) 171, 720, 921, 1860, 2073
BstV1I GCAGC 7 cut(s) 1039, 1174, 1777, 1921, 1990, 2134, 3204
BsuI GTATCC 1 cut(s) 1222
BsuRI GGCC 5 cut(s) 86, 128, 218, 594, 785
BtgI CCRYGG 1 cut(s) 15
BtsCI GGATG 6 cut(s) 898, 1435, 1837, 2050, 2947, 3016
BtsI GCAGTG 2 cut(s) 2592, 2965
BtsIMutI CAGTG 4 cut(s) 2592, 2965, 2977, 3166
Cac8I GCNNGC 4 cut(s) 173, 1923, 2136, 2660
CfoI GCGC 4 cut(s) 921, 1257, 1860, 2073
Cfr13I GGNCC 3 cut(s) 127, 159, 181
Csp6I GTAC 2 cut(s) 2643, 2915
CviAII CATG 8 cut(s) 746, 947, 1685, 1886, 2099, 2384, 2552, 2987
CviQI GTAC 2 cut(s) 2643, 2915
DpnI GATC 4 cut(s) 1614, 2234, 2628, 3027
DpnII GATC 4 cut(s) 1612, 2232, 2626, 3025
DraI TTTAAA 4 cut(s) 1936, 2149, 2685, 2745
DraIII CACNNNGTG 1 cut(s) 3161
EciI GGCGGA 1 cut(s) 130
Ecl136II GAGCTC 2 cut(s) 121, 175
Eco130I CCWWGG 4 cut(s) 1224, 1827, 2040, 2403
Eco24I GRGCYC 2 cut(s) 123, 177
Eco31I GGTCTC 1 cut(s) 35
Eco47I GGWCC 2 cut(s) 159, 181
Eco53kI GAGCTC 2 cut(s) 121, 175
Eco88I CYCGRG 1 cut(s) 3065
Eco91I GGTNACC 1 cut(s) 331
EcoICRI GAGCTC 2 cut(s) 121, 175
EcoO65I GGTNACC 1 cut(s) 331
EcoRI GAATTC 1 cut(s) 2257
EcoRII CCWGG 2 cut(s) 78, 123
EcoT14I CCWWGG 4 cut(s) 1224, 1827, 2040, 2403
EcoT22I ATGCAT 1 cut(s) 3050
EcoT38I GRGCYC 2 cut(s) 123, 177
ErhI CCWWGG 4 cut(s) 1224, 1827, 2040, 2403
FaeI CATG 8 cut(s) 749, 950, 1688, 1889, 2102, 2387, 2555, 2990
FalI AAGNNNNNCTT 2 cut(s) 588, 620
FaqI GGGAC 1 cut(s) 3055
FatI CATG 8 cut(s) 745, 946, 1684, 1885, 2098, 2383, 2551, 2986
FauNDI CATATG 2 cut(s) 1282, 1483
FbaI TGATCA 1 cut(s) 2626
Fnu4HI GCNGC 8 cut(s) 84, 1028, 1163, 1766, 1910, 1979, 2123, 3218
FokI GGATG 6 cut(s) 905, 1442, 1844, 2057, 2954, 3023
FriOI GRGCYC 2 cut(s) 123, 177
Fsp4HI GCNGC 8 cut(s) 84, 1028, 1163, 1766, 1910, 1979, 2123, 3218
FspBI CTAG 3 cut(s) 560, 987, 1122
GlaI GCGC 4 cut(s) 920, 1256, 1859, 2072
GluI GCNGC 8 cut(s) 84, 1028, 1163, 1766, 1910, 1979, 2123, 3218
GsaI CCCAGC 1 cut(s) 2637
GsuI CTGGAG 2 cut(s) 107, 2474
HaeIII GGCC 5 cut(s) 86, 128, 218, 594, 785
HapII CCGG 5 cut(s) 130, 157, 163, 184, 343
HhaI GCGC 4 cut(s) 921, 1257, 1860, 2073
Hin1II CATG 8 cut(s) 749, 950, 1688, 1889, 2102, 2387, 2555, 2990
Hin6I GCGC 4 cut(s) 919, 1255, 1858, 2071
HinP1I GCGC 4 cut(s) 919, 1255, 1858, 2071
HindIII AAGCTT 3 cut(s) 281, 2656, 2747
HpaII CCGG 5 cut(s) 130, 157, 163, 184, 343
HphI GGTGA 1 cut(s) 325
Hpy166II GTNNAC 1 cut(s) 97
Hpy188I TCNGA 5 cut(s) 200, 352, 441, 2796, 3117
Hpy188III TCNNGA 6 cut(s) 64, 157, 2266, 2450, 2491, 2923
Hpy8I GTNNAC 1 cut(s) 97
HpyCH4III ACNGT 2 cut(s) 16, 2787
HpyCH4IV ACGT 1 cut(s) 273
HpyF10VI GCNNNNNNNGC 5 cut(s) 535, 1541, 1918, 2131, 2461
HpySE526I ACGT 1 cut(s) 273
Hsp92II CATG 8 cut(s) 749, 950, 1688, 1889, 2102, 2387, 2555, 2990
HspAI GCGC 4 cut(s) 919, 1255, 1858, 2071
Kpn2I TCCGGA 1 cut(s) 156
Ksp22I TGATCA 1 cut(s) 2626
Kzo9I GATC 4 cut(s) 1612, 2232, 2626, 3025
LguI GCTCTTC 5 cut(s) 1371, 1911, 2124, 2199, 2307
LmnI GCTCC 4 cut(s) 118, 126, 556, 2452
Lsp1109I GCAGC 7 cut(s) 1039, 1174, 1777, 1921, 1990, 2134, 3204
LweI GCATC 9 cut(s) 666, 883, 1420, 1621, 1822, 2035, 2646, 2719, 2932
MaeI CTAG 3 cut(s) 560, 987, 1122
MaeII ACGT 1 cut(s) 273
MaeIII GTNAC 2 cut(s) 331, 600
MalI GATC 4 cut(s) 1614, 2234, 2628, 3027
MboI GATC 4 cut(s) 1612, 2232, 2626, 3025
MfeI CAATTG 2 cut(s) 239, 1565
MhlI GDGCHC 3 cut(s) 123, 177, 828
MlyI GAGTC 5 cut(s) 131, 195, 521, 2481, 3077
MmeI TCCRAC 2 cut(s) 1347, 2175
Mph1103I ATGCAT 1 cut(s) 3050
MroI TCCGGA 1 cut(s) 156
MroXI GAANNNNTTC 2 cut(s) 2273, 2761
MseI TTAA 7 cut(s) 264, 675, 1935, 2148, 2669, 2684, 2744
MslI CAYNNNNRTG 1 cut(s) 3095
MspA1I CMGCKG 5 cut(s) 1030, 1165, 1768, 1981, 3217
MspI CCGG 5 cut(s) 130, 157, 163, 184, 343
MspR9I CCNGG 6 cut(s) 80, 125, 130, 163, 185, 344
MssI GTTTAAAC 2 cut(s) 1936, 2149
MunI CAATTG 2 cut(s) 239, 1565
MvaI CCWGG 2 cut(s) 80, 125
MvnI CGCG 5 cut(s) 171, 720, 921, 1860, 2073
MwoI GCNNNNNNNGC 5 cut(s) 535, 1541, 1918, 2131, 2461
NciI CCSGG 4 cut(s) 130, 163, 185, 344
NdeI CATATG 2 cut(s) 1282, 1483
NdeII GATC 4 cut(s) 1612, 2232, 2626, 3025
NlaIII CATG 8 cut(s) 749, 950, 1688, 1889, 2102, 2387, 2555, 2990
NlaIV GGNNCC 2 cut(s) 161, 167
NmuCI GTSAC 1 cut(s) 331
NsiI ATGCAT 1 cut(s) 3050
NspV TTCGAA 1 cut(s) 23
PaeR7I CTCGAG 1 cut(s) 3065
PciSI GCTCTTC 5 cut(s) 1371, 1911, 2124, 2199, 2307
PcsI WCGNNNNNNNCGW 1 cut(s) 356
PdmI GAANNNNTTC 2 cut(s) 2273, 2761
PkrI GCNGC 8 cut(s) 85, 1029, 1164, 1767, 1911, 1980, 2124, 3219
Ple19I CGATCG 1 cut(s) 1615
PleI GAGTC 5 cut(s) 131, 195, 520, 2481, 3076
PmeI GTTTAAAC 2 cut(s) 1936, 2149
PpsI GAGTC 5 cut(s) 131, 195, 520, 2481, 3076
PsiI TTATAA 1 cut(s) 2621
Psp124BI GAGCTC 2 cut(s) 123, 177
Psp6I CCWGG 2 cut(s) 78, 123
PspEI GGTNACC 1 cut(s) 331
PspFI CCCAGC 1 cut(s) 2633
PspGI CCWGG 2 cut(s) 78, 123
PspN4I GGNNCC 2 cut(s) 161, 167
PspPI GGNCC 3 cut(s) 127, 159, 181
PspXI VCTCGAGB 1 cut(s) 3065
PvuI CGATCG 1 cut(s) 1615
PvuII CAGCTG 5 cut(s) 1030, 1165, 1768, 1981, 3217
RsaI GTAC 2 cut(s) 2644, 2916
RsaNI GTAC 2 cut(s) 2643, 2915
RseI CAYNNNNRTG 1 cut(s) 3095
SacI GAGCTC 2 cut(s) 123, 177
SapI GCTCTTC 5 cut(s) 1371, 1911, 2124, 2199, 2307
SaqAI TTAA 7 cut(s) 264, 675, 1935, 2148, 2669, 2684, 2744
SatI GCNGC 8 cut(s) 84, 1028, 1163, 1766, 1910, 1979, 2123, 3218
Sau3AI GATC 4 cut(s) 1612, 2232, 2626, 3025
Sau96I GGNCC 3 cut(s) 127, 159, 181
SchI GAGTC 5 cut(s) 131, 195, 521, 2481, 3077
ScrFI CCNGG 6 cut(s) 80, 125, 130, 163, 185, 344
SduI GDGCHC 3 cut(s) 123, 177, 828
SfaNI GCATC 9 cut(s) 666, 883, 1420, 1621, 1822, 2035, 2646, 2719, 2932
Sfr274I CTCGAG 1 cut(s) 3065
SfuI TTCGAA 1 cut(s) 23
SinI GGWCC 2 cut(s) 159, 181
SlaI CTCGAG 1 cut(s) 3065
SmiMI CAYNNNNRTG 1 cut(s) 3095
SsiI CCGC 3 cut(s) 83, 141, 169
SspMI CTAG 3 cut(s) 560, 987, 1122
SstI GAGCTC 2 cut(s) 123, 177
StyD4I CCNGG 6 cut(s) 78, 123, 128, 161, 183, 342
StyI CCWWGG 4 cut(s) 1224, 1827, 2040, 2403
TaaI ACNGT 2 cut(s) 16, 2787
TaiI ACGT 1 cut(s) 276
TaqII GACCGA 1 cut(s) 3030
TatI WGTACW 1 cut(s) 2642
TauI GCSGC 1 cut(s) 86
Tru1I TTAA 7 cut(s) 264, 675, 1935, 2148, 2669, 2684, 2744
Tru9I TTAA 7 cut(s) 264, 675, 1935, 2148, 2669, 2684, 2744
TscAI CASTG 4 cut(s) 2599, 2965, 2977, 3166
TseFI GTSAC 1 cut(s) 331
TseI GCWGC 7 cut(s) 1027, 1162, 1765, 1909, 1978, 2122, 3217
Tsp45I GTSAC 1 cut(s) 331
TspGWI ACGGA 1 cut(s) 2604
TspRI CASTG 4 cut(s) 2599, 2965, 2977, 3166
VpaK11BI GGWCC 2 cut(s) 159, 181
XapI RAATTY 3 cut(s) 2257, 2680, 2930
XhoI CTCGAG 1 cut(s) 3065
XmnI GAANNNNTTC 2 cut(s) 2273, 2761
XspI CTAG 3 cut(s) 560, 987, 1122
Zsp2I ATGCAT 1 cut(s) 3050
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.