Rh3DG302300

Potassium channel

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
Physical Location & Seq
Forward (+)
31915174 .. 31917770
2597 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG302300.1

Sequence Viewer

Length: 1212 bp
ATGGAGAATGAGCCCTTTCTCTCCTCCCCACCCCCACTTGAACCCATCATTGAGGACCCTCATGATTTCTCTTTCAATCTCCCTCCTCCCCTCACCGACCCAATTGTGCTTCTCTTACAAGAACCCCCACACCACCAACATGATGAAATACACCAAGACCCACATCCCTCTTCATCGTCTTCCTCATCTTCCGGACCCCGGATTAATGCCCCGACCCGCAAACCCACCATTCTCCAGCGATGCAAGACCGCCCCGGCCATGGCTGTCATGCGAGACCTGAAGCCAAAGACGGCGCAGGTCCCCAAGCCACAGTCCGAGACCAGCTCCATCATCAGACAAGCTGTGTTGTTACTTGTCATGTATCTCTCTCTCGGTGTTGTAATATACTCTTTCAACAGGGACAAGTTCTCCGGTTCGGAAACCCACCCCGTGGTTGACGCCCTCTACTTTTGTATAGTCACTATGTGCACGATTGGGTACGGCGACATTGCTCCGGAAACGCCGCTGGCTAAGGTGTTTTCGTGTGTGTTTGTGTTGGTGGGGTTTGGGTTTATTGACATCTTGCTTAGTGGGGTGGTCAATTATGTGCTGGACTTGCAAGAGCACATAATCTTGACCGGAATCCAAATGAGTCATCACCACCACCACCACGGCAGTAAAAATCACCATGGATTTTCGGACTACATTGTTGATGTGGCCAAGGGGAGGATGAGGATCAGACTCAAGGTGGGTCTGGCGCTTGGTGTGGTGGTGATGTGCATTGGCATGGGGGCTCTGGTTTTGTGTTTTTTGGAGGATTTGGATTGGGTTGATTCCATTTATTTGTCTGTTATGTCGGTTACAACTGTTGGGTATGGGGACAAGGCCTTCAAGTCGCTGCCGGGGCGGCTTTTCGCGGCGGTTTGGCTTCTGTTTTCGACACTGGCGGTGGCGAGAGCCTTTTTGTATTTGGCAGAGGCGAGGGTGGATAAGAGACACAGGAAAATTGTCAAGTGGGTATTGCATAGGGAGATCACTGTCCAGGATTTGCTTGCTGCTGACATCAATAACCATGGCTTCATCAGCAAATCAGAGTATATTGTCTACAAGCTCAAAGAGATGGGAAAGATAGATGAGAAAGATATAATGCAAATCTGCGATCAGTTCAGTAAGCTTGATTCAAACCACTCTGGGAAGATAACACTGCCCGATTTGTTGGAGAATCGCTTCTAA

Protein Analysis

403

Amino Acids

45.07

Weight (kDa)

6.57

Isoelectric Point (pI)

33.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 115 - 195 5.7e-07 Ion transport protein
Ion_trans_2 PF07885 117 - 196 8.8e-17 Ion channel
Ion_trans_2 PF07885 250 - 319 6.6e-12 Ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 286
AccB7I CCANNNNNTGG 1 cut(s) 430
AccI GTMKAC 1 cut(s) 1083
AccII CGCG 1 cut(s) 896
AccIII TCCGGA 2 cut(s) 191, 493
AciI CCGC 7 cut(s) 217, 249, 503, 886, 896, 899, 926
AclWI GGATC 1 cut(s) 722
AcoI YGGCCR 2 cut(s) 255, 696
AcuI CTGAAG 1 cut(s) 299
AcyI GRCGYC 1 cut(s) 438
AdeI CACNNNGTG 2 cut(s) 430, 465
AfaI GTAC 1 cut(s) 479
AfiI CCNNNNNNNGG 4 cut(s) 198, 259, 430, 705
AgsI TTSAA 5 cut(s) 41, 76, 394, 871, 1161
AjnI CCWGG 1 cut(s) 1020
AluBI AGCT 4 cut(s) 324, 341, 1090, 1153
AluI AGCT 4 cut(s) 324, 341, 1090, 1153
Alw21I GWGCWC 2 cut(s) 470, 606
Alw26I GTCTC 3 cut(s) 267, 311, 967
Alw44I GTGCAC 1 cut(s) 466
AlwI GGATC 1 cut(s) 722
Aor13HI TCCGGA 2 cut(s) 191, 493
AoxI GGCC 3 cut(s) 255, 696, 864
ApaLI GTGCAC 1 cut(s) 466
ApeKI GCWGC 2 cut(s) 877, 1034
AseI ATTAAT 1 cut(s) 204
Asp700I GAANNNNTTC 1 cut(s) 1205
AspLEI GCGC 2 cut(s) 295, 739
AspS9I GGNCC 3 cut(s) 55, 194, 298
AsuC2I CCSGG 3 cut(s) 199, 254, 882
AsuHPI GGTGA 4 cut(s) 85, 629, 656, 763
AvaII GGWCC 3 cut(s) 55, 194, 298
BaeGI GKGCMC 1 cut(s) 470
BalI TGGCCA 1 cut(s) 698
BanII GRGCYC 2 cut(s) 15, 775
BbsI GAAGAC 1 cut(s) 171
Bbv12I GWGCWC 2 cut(s) 470, 606
BbvI GCAGC 2 cut(s) 864, 1021
BccI CCATC 3 cut(s) 53, 335, 1093
BceAI ACGGC 3 cut(s) 306, 496, 667
BciT130I CCWGG 1 cut(s) 1022
BcnI CCSGG 3 cut(s) 199, 254, 882
BcoDI GTCTC 3 cut(s) 267, 311, 967
BfoI RGCGCY 1 cut(s) 740
BfuAI ACCTGC 1 cut(s) 286
BglI GCCNNNNNGGC 1 cut(s) 886
BisI GCNGC 5 cut(s) 503, 878, 887, 897, 1035
BlsI GCNGC 5 cut(s) 504, 879, 888, 898, 1036
Bme1390I CCNGG 4 cut(s) 199, 254, 882, 1022
Bme18I GGWCC 3 cut(s) 55, 194, 298
BmgT120I GGNCC 3 cut(s) 55, 194, 298
BmiI GGNNCC 3 cut(s) 57, 196, 300
BmrFI CCNGG 4 cut(s) 199, 254, 882, 1022
BmsI GCATC 1 cut(s) 230
BpiI GAAGAC 1 cut(s) 171
BplI GAGNNNNNCTC 2 cut(s) 308, 340
BpmI CTGGAG 1 cut(s) 218
Bpu10I CCTNAGC 1 cut(s) 510
BpuEI CTTGAG 1 cut(s) 707
BpuMI CCSGG 3 cut(s) 199, 254, 882
BsaBI GATNNNNATC 1 cut(s) 713
BsaHI GRCGYC 1 cut(s) 438
BsaI GGTCTC 2 cut(s) 267, 311
BsaJI CCNNGG 9 cut(s) 197, 252, 258, 429, 649, 667, 699, 881, 1051
BsaWI WCCGGW 4 cut(s) 191, 410, 493, 617
BsaXI ACNNNNNCTCC 2 cut(s) 392, 422
Bsc4I CCNNNNNNNGG 4 cut(s) 198, 259, 430, 705
Bse1I ACTGG 1 cut(s) 927
Bse3DI GCAATG 1 cut(s) 486
Bse8I GATNNNNATC 1 cut(s) 713
BseAI TCCGGA 2 cut(s) 191, 493
BseBI CCWGG 1 cut(s) 1022
BseDI CCNNGG 9 cut(s) 197, 252, 258, 429, 649, 667, 699, 881, 1051
BseGI GGATG 2 cut(s) 163, 714
BseJI GATNNNNATC 1 cut(s) 713
BseLI CCNNNNNNNGG 4 cut(s) 198, 259, 430, 705
BseMI GCAATG 1 cut(s) 486
BseNI ACTGG 1 cut(s) 927
BseRI GAGGAG 2 cut(s) 13, 75
BseSI GKGCMC 1 cut(s) 470
BseXI GCAGC 2 cut(s) 864, 1021
Bsh1236I CGCG 1 cut(s) 896
BshFI GGCC 3 cut(s) 257, 698, 866
BsiHKAI GWGCWC 2 cut(s) 470, 606
BsiSI CCGG 7 cut(s) 192, 199, 254, 411, 494, 618, 881
BslFI GGGAC 3 cut(s) 284, 413, 872
BslI CCNNNNNNNGG 4 cut(s) 198, 259, 430, 705
BsmAI GTCTC 3 cut(s) 267, 311, 967
BsmFI GGGAC 3 cut(s) 284, 413, 872
BsnI GGCC 3 cut(s) 257, 698, 866
Bso31I GGTCTC 2 cut(s) 267, 311
Bsp1286I GDGCHC 4 cut(s) 15, 470, 606, 775
Bsp13I TCCGGA 2 cut(s) 191, 493
Bsp143I GATC 3 cut(s) 714, 1011, 1138
Bsp19I CCATGG 3 cut(s) 258, 667, 1051
BspACI CCGC 7 cut(s) 217, 249, 503, 886, 896, 899, 926
BspANI GGCC 3 cut(s) 257, 698, 866
BspEI TCCGGA 2 cut(s) 191, 493
BspFNI CGCG 1 cut(s) 896
BspHI TCATGA 1 cut(s) 61
BspLI GGNNCC 3 cut(s) 57, 196, 300
BspMI ACCTGC 1 cut(s) 286
BspPI GGATC 1 cut(s) 722
BspTNI GGTCTC 2 cut(s) 267, 311
BsrDI GCAATG 1 cut(s) 486
BsrI ACTGG 1 cut(s) 927
BssECI CCNNGG 9 cut(s) 197, 252, 258, 429, 649, 667, 699, 881, 1051
BssMI GATC 3 cut(s) 714, 1011, 1138
BssNI GRCGYC 1 cut(s) 438
BssT1I CCWWGG 4 cut(s) 258, 667, 699, 1051
Bst2UI CCWGG 1 cut(s) 1022
Bst4CI ACNGT 3 cut(s) 312, 847, 1018
Bst6I CTCTTC 1 cut(s) 175
BstACI GRCGYC 1 cut(s) 438
BstC8I GCNNGC 2 cut(s) 507, 1032
BstDEI CTNAG 2 cut(s) 510, 566
BstDSI CCRYGG 5 cut(s) 258, 429, 649, 667, 1051
BstF5I GGATG 2 cut(s) 163, 714
BstFNI CGCG 1 cut(s) 896
BstH2I RGCGCY 1 cut(s) 740
BstHHI GCGC 2 cut(s) 295, 739
BstKTI GATC 3 cut(s) 717, 1014, 1141
BstMAI GTCTC 3 cut(s) 267, 311, 967
BstMBI GATC 3 cut(s) 714, 1011, 1138
BstMWI GCNNNNNNNGC 4 cut(s) 595, 883, 886, 1062
BstNI CCWGG 1 cut(s) 1022
BstSCI CCNGG 4 cut(s) 197, 252, 880, 1020
BstSLI GKGCMC 1 cut(s) 470
BstUI CGCG 1 cut(s) 896
BstV1I GCAGC 2 cut(s) 864, 1021
BstV2I GAAGAC 1 cut(s) 171
BsuRI GGCC 3 cut(s) 257, 698, 866
BtgI CCRYGG 5 cut(s) 258, 429, 649, 667, 1051
BtgZI GCGATG 1 cut(s) 253
BtsCI GGATG 2 cut(s) 163, 714
BtsI GCAGTG 1 cut(s) 1181
BtsIMutI CAGTG 3 cut(s) 920, 1014, 1181
BveI ACCTGC 1 cut(s) 286
Cac8I GCNNGC 2 cut(s) 507, 1032
CciI TCATGA 1 cut(s) 61
CfoI GCGC 2 cut(s) 295, 739
Cfr13I GGNCC 3 cut(s) 55, 194, 298
CseI GACGC 1 cut(s) 446
Csp6I GTAC 1 cut(s) 478
CviAII CATG 8 cut(s) 62, 140, 259, 268, 358, 668, 766, 1052
CviQI GTAC 1 cut(s) 478
DdeI CTNAG 2 cut(s) 510, 566
DpnI GATC 3 cut(s) 716, 1013, 1140
DpnII GATC 3 cut(s) 714, 1011, 1138
DraIII CACNNNGTG 2 cut(s) 430, 465
EaeI YGGCCR 2 cut(s) 255, 696
Eam1104I CTCTTC 1 cut(s) 175
EarI CTCTTC 1 cut(s) 175
Eco130I CCWWGG 4 cut(s) 258, 667, 699, 1051
Eco147I AGGCCT 1 cut(s) 866
Eco24I GRGCYC 2 cut(s) 15, 775
Eco31I GGTCTC 2 cut(s) 267, 311
Eco47I GGWCC 3 cut(s) 55, 194, 298
Eco57I CTGAAG 1 cut(s) 299
EcoO109I RGGNCCY 2 cut(s) 55, 298
EcoRII CCWGG 1 cut(s) 1020
EcoT14I CCWWGG 4 cut(s) 258, 667, 699, 1051
EcoT38I GRGCYC 2 cut(s) 15, 775
ErhI CCWWGG 4 cut(s) 258, 667, 699, 1051
FaeI CATG 8 cut(s) 65, 143, 262, 271, 361, 671, 769, 1055
FaqI GGGAC 3 cut(s) 284, 413, 872
FatI CATG 8 cut(s) 61, 139, 258, 267, 357, 667, 765, 1051
FauI CCCGC 1 cut(s) 224
FblI GTMKAC 1 cut(s) 1083
Fnu4HI GCNGC 5 cut(s) 503, 878, 887, 897, 1035
FokI GGATG 2 cut(s) 150, 721
FriOI GRGCYC 2 cut(s) 15, 775
Fsp4HI GCNGC 5 cut(s) 503, 878, 887, 897, 1035
GlaI GCGC 2 cut(s) 294, 738
GluI GCNGC 5 cut(s) 503, 878, 887, 897, 1035
GsuI CTGGAG 1 cut(s) 218
HaeII RGCGCY 1 cut(s) 740
HaeIII GGCC 3 cut(s) 257, 698, 866
HapII CCGG 7 cut(s) 192, 199, 254, 411, 494, 618, 881
HgaI GACGC 1 cut(s) 446
HhaI GCGC 2 cut(s) 295, 739
Hin1I GRCGYC 1 cut(s) 438
Hin1II CATG 8 cut(s) 65, 143, 262, 271, 361, 671, 769, 1055
Hin6I GCGC 2 cut(s) 293, 737
HinP1I GCGC 2 cut(s) 293, 737
HincII GTYRAC 1 cut(s) 436
HindII GTYRAC 1 cut(s) 436
HindIII AAGCTT 1 cut(s) 1151
HinfI GANTC 6 cut(s) 621, 631, 720, 812, 1157, 1201
HpaII CCGG 7 cut(s) 192, 199, 254, 411, 494, 618, 881
HphI GGTGA 4 cut(s) 85, 629, 656, 763
Hpy166II GTNNAC 3 cut(s) 436, 468, 1084
Hpy188I TCNGA 6 cut(s) 316, 335, 418, 679, 719, 1072
Hpy188III TCNNGA 4 cut(s) 62, 192, 494, 613
Hpy8I GTNNAC 3 cut(s) 436, 468, 1084
HpyAV CCTTC 1 cut(s) 877
HpyCH4III ACNGT 3 cut(s) 312, 847, 1018
HpyCH4V TGCA 6 cut(s) 243, 468, 598, 759, 1003, 1129
HpyF10VI GCNNNNNNNGC 4 cut(s) 595, 883, 886, 1062
HpyF3I CTNAG 2 cut(s) 510, 566
Hsp92I GRCGYC 1 cut(s) 438
Hsp92II CATG 8 cut(s) 65, 143, 262, 271, 361, 671, 769, 1055
HspAI GCGC 2 cut(s) 293, 737
Kpn2I TCCGGA 2 cut(s) 191, 493
Kzo9I GATC 3 cut(s) 714, 1011, 1138
LmnI GCTCC 2 cut(s) 329, 496
Lsp1109I GCAGC 2 cut(s) 864, 1021
LweI GCATC 1 cut(s) 230
MaeIII GTNAC 3 cut(s) 348, 457, 838
MalI GATC 3 cut(s) 716, 1013, 1140
MboI GATC 3 cut(s) 714, 1011, 1138
MboII GAAGA 4 cut(s) 162, 171, 180, 1186
MfeI CAATTG 1 cut(s) 102
MhlI GDGCHC 4 cut(s) 15, 470, 606, 775
MlsI TGGCCA 1 cut(s) 698
MluCI AATT 3 cut(s) 102, 580, 984
MluNI TGGCCA 1 cut(s) 698
MlyI GAGTC 2 cut(s) 640, 714
MmeI TCCRAC 1 cut(s) 1176
Mox20I TGGCCA 1 cut(s) 698
MroI TCCGGA 2 cut(s) 191, 493
MroXI GAANNNNTTC 1 cut(s) 1205
MscI TGGCCA 1 cut(s) 698
MseI TTAA 1 cut(s) 204
MslI CAYNNNNRTG 2 cut(s) 138, 764
Msp20I TGGCCA 1 cut(s) 698
MspA1I CMGCKG 1 cut(s) 505
MspI CCGG 7 cut(s) 192, 199, 254, 411, 494, 618, 881
MspR9I CCNGG 4 cut(s) 199, 254, 882, 1022
MunI CAATTG 1 cut(s) 102
MvaI CCWGG 1 cut(s) 1022
MvnI CGCG 1 cut(s) 896
MwoI GCNNNNNNNGC 4 cut(s) 595, 883, 886, 1062
NciI CCSGG 3 cut(s) 199, 254, 882
NcoI CCATGG 3 cut(s) 258, 667, 1051
NdeII GATC 3 cut(s) 714, 1011, 1138
NlaIII CATG 8 cut(s) 65, 143, 262, 271, 361, 671, 769, 1055
NlaIV GGNNCC 3 cut(s) 57, 196, 300
NmuCI GTSAC 1 cut(s) 457
PagI TCATGA 1 cut(s) 61
PceI AGGCCT 1 cut(s) 866
PdmI GAANNNNTTC 1 cut(s) 1205
PfeI GAWTC 4 cut(s) 621, 812, 1157, 1201
PflMI CCANNNNNTGG 1 cut(s) 430
PfoI TCCNGGA 1 cut(s) 1020
PkrI GCNGC 5 cut(s) 504, 879, 888, 898, 1036
PleI GAGTC 2 cut(s) 639, 714
PpsI GAGTC 2 cut(s) 639, 714
PpuMI RGGWCCY 2 cut(s) 55, 298
PshBI ATTAAT 1 cut(s) 204
Psp5II RGGWCCY 2 cut(s) 55, 298
Psp6I CCWGG 1 cut(s) 1020
PspGI CCWGG 1 cut(s) 1020
PspN4I GGNNCC 3 cut(s) 57, 196, 300
PspPI GGNCC 3 cut(s) 55, 194, 298
PspPPI RGGWCCY 2 cut(s) 55, 298
RsaI GTAC 1 cut(s) 479
RsaNI GTAC 1 cut(s) 478
RseI CAYNNNNRTG 2 cut(s) 138, 764
SaqAI TTAA 1 cut(s) 204
SatI GCNGC 5 cut(s) 503, 878, 887, 897, 1035
Sau3AI GATC 3 cut(s) 714, 1011, 1138
Sau96I GGNCC 3 cut(s) 55, 194, 298
SchI GAGTC 2 cut(s) 640, 714
ScrFI CCNGG 4 cut(s) 199, 254, 882, 1022
SduI GDGCHC 4 cut(s) 15, 470, 606, 775
SetI ASST 8 cut(s) 279, 300, 326, 343, 516, 729, 1092, 1155
SfaNI GCATC 1 cut(s) 230
SinI GGWCC 3 cut(s) 55, 194, 298
SmiMI CAYNNNNRTG 2 cut(s) 138, 764
SmlI CTYRAG 1 cut(s) 722
SmoI CTYRAG 1 cut(s) 722
Sse9I AATT 3 cut(s) 102, 580, 984
SseBI AGGCCT 1 cut(s) 866
SsiI CCGC 7 cut(s) 217, 249, 503, 886, 896, 899, 926
StuI AGGCCT 1 cut(s) 866
StyD4I CCNGG 4 cut(s) 197, 252, 880, 1020
StyI CCWWGG 4 cut(s) 258, 667, 699, 1051
TaaI ACNGT 3 cut(s) 312, 847, 1018
TaqI TCGA 1 cut(s) 917
TasI AATT 3 cut(s) 102, 580, 984
TauI GCSGC 3 cut(s) 505, 889, 899
TfiI GAWTC 4 cut(s) 621, 812, 1157, 1201
Tru1I TTAA 1 cut(s) 204
Tru9I TTAA 1 cut(s) 204
TscAI CASTG 3 cut(s) 927, 1021, 1188
TseFI GTSAC 1 cut(s) 457
TseI GCWGC 2 cut(s) 877, 1034
Tsp45I GTSAC 1 cut(s) 457
TspDTI ATGAA 3 cut(s) 159, 162, 1048
TspRI CASTG 3 cut(s) 927, 1021, 1188
Van91I CCANNNNNTGG 1 cut(s) 430
VneI GTGCAC 1 cut(s) 466
VpaK11BI GGWCC 3 cut(s) 55, 194, 298
VspI ATTAAT 1 cut(s) 204
XmiI GTMKAC 1 cut(s) 1083
XmnI GAANNNNTTC 1 cut(s) 1205
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.