No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G33760 |
| fragaria_vesca | FvH4_4g05520 |
| malus_domestica | MD10G1295100.v1.1 |
| prunus_persica | Prupe.4G047100_v2.0.a1 |
| pyrus_communis | pycom10g24690 |
| rosa_chinensis | RchiOBHm_Chr5g0008361 |
| rosa_laevigata | RLG00000031504 RLG00000031508 RLG00000031509 RLG00000031512 RLG00000031518 RLG00000031519 RLG00000031564 |
| rosa_multiflora | Rmu_sc0008805.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00055520 Rroxscaffold_1G00068130 Rroxscaffold_1G00068520 |
| rosa_rugosa | Rorug04G0435500 |
| rosa_samantha | Rh5AG059900 Rh5AG060000 Rh5AG064000 Rh5BG060900 Rh5CG070900 Rh6CG126900 |
| rosa_wichuraiana | Rw5G005700 Rw5G006030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 226 |
| AciI | CCGC | 7 cut(s) | 5, 38, 71, 104, 184, 226, 321 |
| AcoI | YGGCCR | 1 cut(s) | 137 |
| AcsI | RAATTY | 1 cut(s) | 299 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 190 |
| AgsI | TTSAA | 2 cut(s) | 282, 364 |
| AluBI | AGCT | 1 cut(s) | 327 |
| AluI | AGCT | 1 cut(s) | 327 |
| AoxI | GGCC | 3 cut(s) | 23, 137, 227 |
| ApeKI | GCWGC | 1 cut(s) | 242 |
| ApoI | RAATTY | 1 cut(s) | 299 |
| AspLEI | GCGC | 1 cut(s) | 247 |
| AspS9I | GGNCC | 1 cut(s) | 23 |
| BbsI | GAAGAC | 2 cut(s) | 141, 270 |
| BbvCI | CCTCAGC | 1 cut(s) | 219 |
| BbvI | GCAGC | 1 cut(s) | 229 |
| BccI | CCATC | 4 cut(s) | 34, 52, 67, 100 |
| BceAI | ACGGC | 1 cut(s) | 94 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 9, 43, 75, 108, 109, 142 |
| BisI | GCNGC | 2 cut(s) | 227, 243 |
| BlsI | GCNGC | 2 cut(s) | 228, 244 |
| BmgT120I | GGNCC | 1 cut(s) | 23 |
| BmiI | GGNNCC | 5 cut(s) | 9, 42, 75, 108, 195 |
| BmsI | GCATC | 1 cut(s) | 134 |
| BpiI | GAAGAC | 2 cut(s) | 141, 270 |
| Bpu10I | CCTNAGC | 1 cut(s) | 219 |
| BpuEI | CTTGAG | 1 cut(s) | 226 |
| BsaXI | ACNNNNNCTCC | 7 cut(s) | 29, 32, 62, 65, 95, 98, 128 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 190 |
| Bse118I | RCCGGY | 1 cut(s) | 135 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 190 |
| BseMII | CTCAG | 2 cut(s) | 210, 222 |
| BseRI | GAGGAG | 1 cut(s) | 236 |
| BseXI | GCAGC | 1 cut(s) | 229 |
| Bsh1285I | CGRYCG | 1 cut(s) | 136 |
| BshFI | GGCC | 3 cut(s) | 25, 139, 229 |
| BsiEI | CGRYCG | 1 cut(s) | 136 |
| BsiSI | CCGG | 1 cut(s) | 136 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 190 |
| BsnI | GGCC | 3 cut(s) | 25, 139, 229 |
| Bsp143I | GATC | 1 cut(s) | 287 |
| BspACI | CCGC | 7 cut(s) | 5, 38, 71, 104, 184, 226, 321 |
| BspANI | GGCC | 3 cut(s) | 25, 139, 229 |
| BspCNI | CTCAG | 2 cut(s) | 211, 223 |
| BspLI | GGNNCC | 5 cut(s) | 9, 42, 75, 108, 195 |
| BsrBI | CCGCTC | 1 cut(s) | 226 |
| BsrFI | RCCGGY | 1 cut(s) | 135 |
| BssAI | RCCGGY | 1 cut(s) | 135 |
| BssMI | GATC | 1 cut(s) | 287 |
| Bst4CI | ACNGT | 1 cut(s) | 355 |
| BstDEI | CTNAG | 2 cut(s) | 219, 231 |
| BstHHI | GCGC | 1 cut(s) | 247 |
| BstKTI | GATC | 1 cut(s) | 290 |
| BstMBI | GATC | 1 cut(s) | 287 |
| BstMCI | CGRYCG | 1 cut(s) | 136 |
| BstV1I | GCAGC | 1 cut(s) | 229 |
| BstV2I | GAAGAC | 2 cut(s) | 141, 270 |
| BsuRI | GGCC | 3 cut(s) | 25, 139, 229 |
| CfoI | GCGC | 1 cut(s) | 247 |
| Cfr10I | RCCGGY | 1 cut(s) | 135 |
| Cfr13I | GGNCC | 1 cut(s) | 23 |
| DdeI | CTNAG | 2 cut(s) | 219, 231 |
| DpnI | GATC | 1 cut(s) | 289 |
| DpnII | GATC | 1 cut(s) | 287 |
| EaeI | YGGCCR | 1 cut(s) | 137 |
| EciI | GGCGGA | 4 cut(s) | 20, 53, 86, 119 |
| Eco32I | GATATC | 1 cut(s) | 237 |
| EcoRV | GATATC | 1 cut(s) | 237 |
| FaiI | YATR | 1 cut(s) | 297 |
| Fnu4HI | GCNGC | 2 cut(s) | 227, 243 |
| Fsp4HI | GCNGC | 2 cut(s) | 227, 243 |
| GlaI | GCGC | 1 cut(s) | 246 |
| GluI | GCNGC | 2 cut(s) | 227, 243 |
| HaeIII | GGCC | 3 cut(s) | 25, 139, 229 |
| HapII | CCGG | 1 cut(s) | 136 |
| HhaI | GCGC | 1 cut(s) | 247 |
| Hin6I | GCGC | 1 cut(s) | 245 |
| HinP1I | GCGC | 1 cut(s) | 245 |
| HindIII | AAGCTT | 1 cut(s) | 325 |
| HinfI | GANTC | 2 cut(s) | 143, 335 |
| HpaII | CCGG | 1 cut(s) | 136 |
| Hpy188I | TCNGA | 5 cut(s) | 31, 64, 97, 133, 334 |
| Hpy188III | TCNNGA | 1 cut(s) | 205 |
| Hpy99I | CGWCG | 2 cut(s) | 16, 115 |
| HpyAV | CCTTC | 2 cut(s) | 87, 165 |
| HpyCH4III | ACNGT | 1 cut(s) | 355 |
| HpyF3I | CTNAG | 2 cut(s) | 219, 231 |
| HspAI | GCGC | 1 cut(s) | 245 |
| Kzo9I | GATC | 1 cut(s) | 287 |
| LmnI | GCTCC | 5 cut(s) | 7, 40, 73, 106, 223 |
| LpnPI | CCDG | 6 cut(s) | 6, 52, 105, 149, 153, 243 |
| Lsp1109I | GCAGC | 1 cut(s) | 229 |
| LweI | GCATC | 1 cut(s) | 134 |
| MalI | GATC | 1 cut(s) | 289 |
| MbiI | CCGCTC | 1 cut(s) | 226 |
| MboI | GATC | 1 cut(s) | 287 |
| MboII | GAAGA | 2 cut(s) | 141, 270 |
| MluCI | AATT | 2 cut(s) | 291, 299 |
| MlyI | GAGTC | 1 cut(s) | 152 |
| MmeI | TCCRAC | 1 cut(s) | 156 |
| MnlI | CCTC | 5 cut(s) | 151, 182, 201, 208, 214 |
| MspI | CCGG | 1 cut(s) | 136 |
| NdeII | GATC | 1 cut(s) | 287 |
| NlaIV | GGNNCC | 5 cut(s) | 9, 42, 75, 108, 195 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 158 |
| PfeI | GAWTC | 1 cut(s) | 335 |
| PkrI | GCNGC | 2 cut(s) | 228, 244 |
| PleI | GAGTC | 1 cut(s) | 151 |
| PpsI | GAGTC | 1 cut(s) | 151 |
| PspN4I | GGNNCC | 5 cut(s) | 9, 42, 75, 108, 195 |
| PspPI | GGNCC | 1 cut(s) | 23 |
| SatI | GCNGC | 2 cut(s) | 227, 243 |
| Sau3AI | GATC | 1 cut(s) | 287 |
| Sau96I | GGNCC | 1 cut(s) | 23 |
| SchI | GAGTC | 1 cut(s) | 152 |
| SetI | ASST | 1 cut(s) | 329 |
| SfaNI | GCATC | 1 cut(s) | 134 |
| SmlI | CTYRAG | 1 cut(s) | 205 |
| SmoI | CTYRAG | 1 cut(s) | 205 |
| Sse9I | AATT | 2 cut(s) | 291, 299 |
| SsiI | CCGC | 7 cut(s) | 5, 38, 71, 104, 184, 226, 321 |
| TaaI | ACNGT | 1 cut(s) | 355 |
| TasI | AATT | 2 cut(s) | 291, 299 |
| TauI | GCSGC | 1 cut(s) | 229 |
| TfiI | GAWTC | 1 cut(s) | 335 |
| TseI | GCWGC | 1 cut(s) | 242 |
| TspDTI | ATGAA | 1 cut(s) | 312 |
| XapI | RAATTY | 1 cut(s) | 299 |