Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0006665

Physical Location & Seq

Genomic Coordinates Forward (+)

5034143 .. 5035900

Gene Structure 1758 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG060900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGGAAACCAAACACAGCTCCCCGCCAAAATCTCCAGCCTACAAAGCTCTACTCAAAGCCGGTCCAAATCTGAAGCCTCTTCAACAAGTCCACGCCCACATTATCGTCTCTGGATCTCACCGCAGCCGATCACTTTCACTCCTCACCAAGCTCATCACTCTGGCTTGCGAAGCCGGCTCGATTCTCTACACCCACAACCTCTTCCTCTCCGTCCCTCACCCCGACTCCTTCCTCTTCAATTCCATAATCAAGACATCCTCTAAGTTCGGCTTCCCGCAACACACTCTCTTCTTCTATCACTCCATGCTCGGCTTTCGAACCCCGCCGAGTAGTTACACCTTCACCTCTGTGATCAAGGCCTGCGCCGATCTAAGGGCTCTGAGACTCGGTAGGGGTGTGCATTCACATGTAGTGGTGTGTGGGTGTGGGTCGGAGCCGTTTGTTCAGGCGGCTCTTGTTAGCTTGTATTCGAAATGTGGGGAGTTTGGGGTTGCAAGGAAGGTGTTCGATGAAATGCCTGAGAGGAGTGTTGTGGGTTGGAACTCGATGATTTCGGGGTACGAGCAGAACGGGTTTTCGAGAGAGGCGATTGAGGTGTTTAAGGAGATGAGGGAGGCGGGTGTTGAGCCGGATTCGACTGGTTTCGTGAATGTTTTGGCGGCGTGTTCTCAGTTGGGAGATGTTGGTTTAGGGTGTTCGGTGCATGATGAGGTTGTCAGGAAGGGGATAGAAGTGAATGTGGCTCTAGGGACTTCGCTGATCAACATGTATGCTAGGTGTGGGGATGTGAGCAAAGCGCGAGAAGTTTTCGATTGTATGGATGAAAGGAATGTTATTACTTGGACTGCTATGATTTCGGGGTACGCAACGAATGGTTATGGTAGTCAAGCTATGGAGCTTTTTGGCGAAATGAGAGCTCGTGGTCCTAGTCCTAACACCGTGACATTTGTTGCAGTCTTGGCGGCTTGTGCTCATGCCGGGCTAGTGAAAGAAGGGAGGCAGGCATATGCGAGCATGAGGCAAGAGTATGGATTAGTGCCGGGAGTGGAGCACCGTGTTTGCCTGGTTGATATGCTTGGGCGTTCTGGGCTTCTCGACGAAGCATATCAGTTCATCAAAGAGCTTAGCCCGGGAGAGGCAGCTCCACCTCTTTGGACTGCCATGCTTGGGGCTTGCAAGATGCATAAGAATACCGATCTCGGAGTCACAGTGGCTGAGCATCTTTTGGAGATTGAGCCAGAAAATCCAGGCCATTATGTGATGCTTTCGAACATATATGCAGTGGCGGGTAGGATGGATAGAGTGGAAATGGTTAGAAACATGATGAAAGGAAGAAGCTTGAGAAAGCAAGTTGGCTATAGTACAATACATGTGAATCAGAAAACCTATTTGTTTAGCATGGGCGACAAGTCCCACCCAGAGACAAATGAAATTTATCAGTATTTAGATGAATTGATGCGGTGGTGCAGTGAAGCAGGGTATGCACCAGCACCGGAGTTAGTGATGCATGAAGTGGAAGAAGAAGAGAGGGAATATGCCCTTAGATATCACAGTGAGAAGCTTGCAATTGCATATGGGCTAATGAAAACCAAGGATGGTGAGGCCATTAGGATTGTAAAGAACCTCCGAATGTGTGAGGACTGCCACTCGGCTATTAAGTTTATCTCAGTTGTTACCAAAAGAGAGATTATTGTTCGGGATAAGCTTCGCTTCCACCATTTCAAATATGGCTCCTGTTCATGCCTGGATTATTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

585

Amino Acids

65.12

Weight (kDa)

7.3

Isoelectric Point (pI)

46.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	176 - 219	8.8e-10	PPR repeat family
PPR	PF01535	180 - 208	2.8e-09	PPR repeat
PPR_2	PF13041	276 - 325	3.5e-12	PPR repeat family
PPR_3	PF13812	277 - 323	1.3e-06	Pentatricopeptide repeat domain
PPR	PF01535	279 - 308	1.1e-07	PPR repeat
E_motif	PF20431	395 - 456	7.3e-15	E motif
Eplus_motif	PF20430	462 - 487	2.8e-07	E+ motif
DYW_deaminase	PF14432	493 - 585	8.2e-39	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0006665)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33760
fragaria_vesca	FvH4_4g05520
malus_domestica	MD10G1295100.v1.1
prunus_persica	Prupe.4G047100_v2.0.a1
pyrus_communis	pycom10g24690
rosa_chinensis	RchiOBHm_Chr5g0008361
rosa_laevigata	RLG00000031504 RLG00000031508 RLG00000031509 RLG00000031512 RLG00000031518 RLG00000031519 RLG00000031564
rosa_multiflora	Rmu_sc0008805.1_g000001
rosa_roxburghii	Rroxscaffold_1G00055520 Rroxscaffold_1G00068130 Rroxscaffold_1G00068520
rosa_rugosa	Rorug04G0435500
rosa_samantha	Rh5AG059900 Rh5AG060000 Rh5AG064000 Rh5BG060900 Rh5CG070900 Rh6CG126900
rosa_wichuraiana	Rw5G005700 Rw5G006030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	799
AclWI	GGATC	1 cut(s)	121
AcsI	RAATTY	1 cut(s)	1431
AcuI	CTGAAG	1 cut(s)	92
AfaI	GTAC	3 cut(s)	560, 863, 1363
AfiI	CCNNNNNNNGG	3 cut(s)	372, 1135, 1167
AflIII	ACRYGT	3 cut(s)	406, 765, 1369
AgsI	TTSAA	3 cut(s)	83, 238, 1723
AjnI	CCWGG	3 cut(s)	1062, 1246, 1743
AleI	CACNNNNGTG	1 cut(s)	347
Alw21I	GWGCWC	3 cut(s)	919, 973, 1053
Alw26I	GTCTC	3 cut(s)	112, 376, 1415
AlwI	GGATC	1 cut(s)	121
AlwNI	CAGNNNCTG	1 cut(s)	1214
Ama87I	CYCGRG	1 cut(s)	1129
AoxI	GGCC	3 cut(s)	357, 1249, 1602
ApeKI	GCWGC	2 cut(s)	123, 1139
ApoI	RAATTY	1 cut(s)	1431
Asp700I	GAANNNNTTC	1 cut(s)	503
AspLEI	GCGC	2 cut(s)	365, 799
AspS9I	GGNCC	2 cut(s)	62, 923
AsuC2I	CCSGG	4 cut(s)	979, 1041, 1130, 1131
AsuHPI	GGTGA	5 cut(s)	110, 136, 209, 334, 1610
AsuII	TTCGAA	3 cut(s)	316, 470, 1268
AvaI	CYCGRG	1 cut(s)	1129
AvaII	GGWCC	2 cut(s)	62, 923
BanII	GRGCYC	2 cut(s)	379, 919
BauI	CACGAG	1 cut(s)	918
Bbv12I	GWGCWC	3 cut(s)	919, 973, 1053
BbvI	GCAGC	2 cut(s)	135, 1151
BccI	CCATC	2 cut(s)	1288, 1589
BceAI	ACGGC	1 cut(s)	421
BciT130I	CCWGG	3 cut(s)	1064, 1248, 1745
BclI	TGATCA	2 cut(s)	351, 759
BcnI	CCSGG	4 cut(s)	979, 1041, 1130, 1131
BcoDI	GTCTC	3 cut(s)	112, 376, 1415
BfaI	CTAG	4 cut(s)	746, 774, 927, 983
BfmI	CTRYAG	1 cut(s)	1357
BisI	GCNGC	5 cut(s)	124, 450, 660, 963, 1140
BlpI	GCTNAGC	2 cut(s)	1124, 1215
BlsI	GCNGC	5 cut(s)	125, 451, 661, 964, 1141
Bme1390I	CCNGG	7 cut(s)	979, 1041, 1064, 1130, 1131, 1248, 1745
Bme18I	GGWCC	2 cut(s)	62, 923
BmeT110I	CYCGRG	1 cut(s)	1129
BmgT120I	GGNCC	2 cut(s)	62, 923
BmiI	GGNNCC	2 cut(s)	435, 1732
BmrFI	CCNGG	7 cut(s)	979, 1041, 1064, 1130, 1131, 1248, 1745
BmsI	GCATC	5 cut(s)	1170, 1228, 1251, 1446, 1494
BpmI	CTGGAG	1 cut(s)	18
Bpu1102I	GCTNAGC	2 cut(s)	1124, 1215
Bpu14I	TTCGAA	3 cut(s)	316, 470, 1268
BpuEI	CTTGAG	1 cut(s)	1360
BpuMI	CCSGG	4 cut(s)	979, 1041, 1130, 1131
BsaJI	CCNNGG	2 cut(s)	1129, 1590
BsaWI	WCCGGW	1 cut(s)	1492
BsaXI	ACNNNNNCTCC	6 cut(s)	123, 153, 209, 239, 1194, 1224
Bsc4I	CCNNNNNNNGG	3 cut(s)	372, 1135, 1167
Bse118I	RCCGGY	2 cut(s)	59, 173
Bse1I	ACTGG	1 cut(s)	643
BseBI	CCWGG	3 cut(s)	1064, 1248, 1745
BseDI	CCNNGG	2 cut(s)	1129, 1590
BseGI	GGATG	5 cut(s)	254, 790, 826, 1299, 1600
BseLI	CCNNNNNNNGG	3 cut(s)	372, 1135, 1167
BseMII	CTCAG	5 cut(s)	371, 510, 683, 1206, 1680
BseNI	ACTGG	1 cut(s)	643
BseRI	GAGGAG	2 cut(s)	131, 538
BseXI	GCAGC	2 cut(s)	135, 1151
BsgI	GTGCAG	1 cut(s)	1486
Bsh1236I	CGCG	1 cut(s)	799
BshFI	GGCC	3 cut(s)	359, 1251, 1604
BsiHKAI	GWGCWC	3 cut(s)	919, 973, 1053
BsiHKCI	CYCGRG	1 cut(s)	1129
BsiSI	CCGG	7 cut(s)	60, 174, 629, 978, 1040, 1130, 1493
BslFI	GGGAC	3 cut(s)	197, 763, 1396
BslI	CCNNNNNNNGG	3 cut(s)	372, 1135, 1167
BsmAI	GTCTC	3 cut(s)	112, 376, 1415
BsmBI	CGTCTC	1 cut(s)	112
BsmFI	GGGAC	3 cut(s)	197, 763, 1396
BsmI	GAATGC	1 cut(s)	400
BsnI	GGCC	3 cut(s)	359, 1251, 1604
BsoBI	CYCGRG	1 cut(s)	1129
Bsp119I	TTCGAA	3 cut(s)	316, 470, 1268
Bsp1286I	GDGCHC	4 cut(s)	379, 919, 973, 1053
Bsp143I	GATC	6 cut(s)	113, 128, 351, 367, 759, 1195
Bsp1720I	GCTNAGC	2 cut(s)	1124, 1215
BspANI	GGCC	3 cut(s)	359, 1251, 1604
BspCNI	CTCAG	5 cut(s)	372, 511, 682, 1207, 1679
BspFNI	CGCG	1 cut(s)	799
BspLI	GGNNCC	2 cut(s)	435, 1732
BspPI	GGATC	1 cut(s)	121
BspT104I	TTCGAA	3 cut(s)	316, 470, 1268
BsrFI	RCCGGY	2 cut(s)	59, 173
BsrI	ACTGG	1 cut(s)	643
BssAI	RCCGGY	2 cut(s)	59, 173
BssECI	CCNNGG	2 cut(s)	1129, 1590
BssMI	GATC	6 cut(s)	113, 128, 351, 367, 759, 1195
BssSI	CACGAG	1 cut(s)	918
BssT1I	CCWWGG	1 cut(s)	1590
Bst2BI	CACGAG	1 cut(s)	918
Bst2UI	CCWGG	3 cut(s)	1064, 1248, 1745
Bst4CI	ACNGT	4 cut(s)	940, 1055, 1210, 1553
Bst6I	CTCTTC	5 cut(s)	84, 206, 239, 293, 1518
BstAPI	GCANNNNNTGC	1 cut(s)	1481
BstBI	TTCGAA	3 cut(s)	316, 470, 1268
BstC8I	GCNNGC	7 cut(s)	166, 175, 361, 1002, 1012, 1174, 1563
BstDEI	CTNAG	9 cut(s)	261, 371, 380, 519, 669, 1124, 1215, 1541, 1666
BstF5I	GGATG	5 cut(s)	254, 790, 826, 1299, 1600
BstFNI	CGCG	1 cut(s)	799
BstHHI	GCGC	2 cut(s)	365, 799
BstKTI	GATC	6 cut(s)	116, 131, 354, 370, 762, 1198
BstMAI	GTCTC	3 cut(s)	112, 376, 1415
BstMBI	GATC	6 cut(s)	113, 128, 351, 367, 759, 1195
BstMWI	GCNNNNNNNGC	7 cut(s)	44, 170, 174, 959, 968, 1087, 1481
BstNI	CCWGG	3 cut(s)	1064, 1248, 1745
BstNSI	RCATGY	3 cut(s)	410, 769, 1373
BstSCI	CCNGG	7 cut(s)	977, 1039, 1062, 1128, 1129, 1246, 1743
BstSFI	CTRYAG	1 cut(s)	1357
BstUI	CGCG	1 cut(s)	799
BstV1I	GCAGC	2 cut(s)	135, 1151
BstX2I	RGATCY	1 cut(s)	113
BstXI	CCANNNNNNTGG	1 cut(s)	1152
BstYI	RGATCY	1 cut(s)	113
BsuRI	GGCC	3 cut(s)	359, 1251, 1604
BtsCI	GGATG	5 cut(s)	254, 790, 826, 1299, 1600
BtsI	GCAGTG	2 cut(s)	1287, 1474
BtsIMutI	CAGTG	4 cut(s)	1215, 1287, 1474, 1558
Cac8I	GCNNGC	7 cut(s)	166, 175, 361, 1002, 1012, 1174, 1563
CaiI	CAGNNNCTG	1 cut(s)	1214
CfoI	GCGC	2 cut(s)	365, 799
Cfr10I	RCCGGY	2 cut(s)	59, 173
Cfr13I	GGNCC	2 cut(s)	62, 923
Cfr9I	CCCGGG	1 cut(s)	1129
Csp6I	GTAC	3 cut(s)	559, 862, 1362
CviQI	GTAC	3 cut(s)	559, 862, 1362
DdeI	CTNAG	9 cut(s)	261, 371, 380, 519, 669, 1124, 1215, 1541, 1666
DpnI	GATC	6 cut(s)	115, 130, 353, 369, 761, 1197
DpnII	GATC	6 cut(s)	113, 128, 351, 367, 759, 1195
Eam1104I	CTCTTC	5 cut(s)	84, 206, 239, 293, 1518
EarI	CTCTTC	5 cut(s)	84, 206, 239, 293, 1518
Ecl136II	GAGCTC	1 cut(s)	917
Eco130I	CCWWGG	1 cut(s)	1590
Eco147I	AGGCCT	1 cut(s)	359
Eco24I	GRGCYC	2 cut(s)	379, 919
Eco32I	GATATC	1 cut(s)	1547
Eco47I	GGWCC	2 cut(s)	62, 923
Eco53kI	GAGCTC	1 cut(s)	917
Eco57I	CTGAAG	1 cut(s)	92
Eco88I	CYCGRG	1 cut(s)	1129
EcoICRI	GAGCTC	1 cut(s)	917
EcoRII	CCWGG	3 cut(s)	1062, 1246, 1743
EcoRV	GATATC	1 cut(s)	1547
EcoT14I	CCWWGG	1 cut(s)	1590
EcoT22I	ATGCAT	2 cut(s)	1185, 1509
EcoT38I	GRGCYC	2 cut(s)	379, 919
ErhI	CCWWGG	1 cut(s)	1590
Esp3I	CGTCTC	1 cut(s)	112
FalI	AAGNNNNNCTT	4 cut(s)	254, 286, 1694, 1726
FaqI	GGGAC	3 cut(s)	197, 763, 1396
FauI	CCCGC	5 cut(s)	30, 282, 330, 610, 1279
FauNDI	CATATG	2 cut(s)	1006, 1573
FbaI	TGATCA	2 cut(s)	351, 759
Fnu4HI	GCNGC	5 cut(s)	124, 450, 660, 963, 1140
FokI	GGATG	5 cut(s)	241, 797, 833, 1306, 1607
FriOI	GRGCYC	2 cut(s)	379, 919
Fsp4HI	GCNGC	5 cut(s)	124, 450, 660, 963, 1140
FspBI	CTAG	4 cut(s)	746, 774, 927, 983
GlaI	GCGC	2 cut(s)	364, 798
GluI	GCNGC	5 cut(s)	124, 450, 660, 963, 1140
GsuI	CTGGAG	1 cut(s)	18
HaeIII	GGCC	3 cut(s)	359, 1251, 1604
HapII	CCGG	7 cut(s)	60, 174, 629, 978, 1040, 1130, 1493
HhaI	GCGC	2 cut(s)	365, 799
Hin6I	GCGC	2 cut(s)	363, 797
HinP1I	GCGC	2 cut(s)	363, 797
HindIII	AAGCTT	3 cut(s)	1336, 1559, 1703
HinfI	GANTC	6 cut(s)	181, 224, 384, 632, 1203, 1375
HpaII	CCGG	7 cut(s)	60, 174, 629, 978, 1040, 1130, 1493
HphI	GGTGA	5 cut(s)	110, 136, 209, 334, 1610
Hpy166II	GTNNAC	1 cut(s)	91
Hpy188I	TCNGA	6 cut(s)	72, 381, 433, 1202, 1380, 1628
Hpy188III	TCNNGA	7 cut(s)	111, 250, 579, 646, 718, 1094, 1697
Hpy8I	GTNNAC	1 cut(s)	91
Hpy99I	CGWCG	1 cut(s)	1100
HpyAV	CCTTC	5 cut(s)	238, 349, 493, 715, 986
HpyCH4III	ACNGT	4 cut(s)	940, 1055, 1210, 1553
HpyF10VI	GCNNNNNNNGC	7 cut(s)	44, 170, 174, 959, 968, 1087, 1481
HpyF3I	CTNAG	9 cut(s)	261, 371, 380, 519, 669, 1124, 1215, 1541, 1666
HspAI	GCGC	2 cut(s)	363, 797
KroI	GCCGGC	1 cut(s)	173
KroNI	GCCGGC	1 cut(s)	175
Ksp22I	TGATCA	2 cut(s)	351, 759
Kzo9I	GATC	6 cut(s)	113, 128, 351, 367, 759, 1195
LmnI	GCTCC	6 cut(s)	23, 433, 895, 1048, 1147, 1736
Lsp1109I	GCAGC	2 cut(s)	135, 1151
LweI	GCATC	5 cut(s)	1170, 1228, 1251, 1446, 1494
MaeI	CTAG	4 cut(s)	746, 774, 927, 983
MaeIII	GTNAC	4 cut(s)	332, 940, 1204, 1672
MalI	GATC	6 cut(s)	115, 130, 353, 369, 761, 1197
MboI	GATC	6 cut(s)	113, 128, 351, 367, 759, 1195
MboII	GAAGA	9 cut(s)	71, 193, 226, 280, 283, 1344, 1529, 1532, 1535
MfeI	CAATTG	1 cut(s)	1566
MflI	RGATCY	1 cut(s)	113
MhlI	GDGCHC	4 cut(s)	379, 919, 973, 1053
MluCI	AATT	4 cut(s)	238, 1431, 1451, 1566
MlyI	GAGTC	3 cut(s)	218, 378, 1212
MmeI	TCCRAC	2 cut(s)	411, 518
Mph1103I	ATGCAT	2 cut(s)	1185, 1509
MroNI	GCCGGC	1 cut(s)	173
MroXI	GAANNNNTTC	1 cut(s)	503
MseI	TTAA	2 cut(s)	600, 1656
MslI	CAYNNNNRTG	2 cut(s)	347, 405
MspI	CCGG	7 cut(s)	60, 174, 629, 978, 1040, 1130, 1493
MspR9I	CCNGG	7 cut(s)	979, 1041, 1064, 1130, 1131, 1248, 1745
MunI	CAATTG	1 cut(s)	1566
Mva1269I	GAATGC	1 cut(s)	400
MvaI	CCWGG	3 cut(s)	1064, 1248, 1745
MvnI	CGCG	1 cut(s)	799
MwoI	GCNNNNNNNGC	7 cut(s)	44, 170, 174, 959, 968, 1087, 1481
NaeI	GCCGGC	1 cut(s)	175
NciI	CCSGG	4 cut(s)	979, 1041, 1130, 1131
NdeI	CATATG	2 cut(s)	1006, 1573
NdeII	GATC	6 cut(s)	113, 128, 351, 367, 759, 1195
NgoMIV	GCCGGC	1 cut(s)	173
NlaIV	GGNNCC	2 cut(s)	435, 1732
NmeAIII	GCCGAG	3 cut(s)	288, 351, 1628
NmuCI	GTSAC	2 cut(s)	940, 1204
NsiI	ATGCAT	2 cut(s)	1185, 1509
NspI	RCATGY	3 cut(s)	410, 769, 1373
NspV	TTCGAA	3 cut(s)	316, 470, 1268
OliI	CACNNNNGTG	1 cut(s)	347
PceI	AGGCCT	1 cut(s)	359
PciI	ACATGT	3 cut(s)	406, 765, 1369
PcsI	WCGNNNNNNNCGW	1 cut(s)	584
PctI	GAATGC	1 cut(s)	400
PdiI	GCCGGC	1 cut(s)	175
PdmI	GAANNNNTTC	1 cut(s)	503
PfeI	GAWTC	3 cut(s)	181, 632, 1375
PkrI	GCNGC	5 cut(s)	125, 451, 661, 964, 1141
PleI	GAGTC	3 cut(s)	218, 378, 1211
PpsI	GAGTC	3 cut(s)	218, 378, 1211
PscI	ACATGT	3 cut(s)	406, 765, 1369
Psp124BI	GAGCTC	1 cut(s)	919
Psp6I	CCWGG	3 cut(s)	1062, 1246, 1743
PspGI	CCWGG	3 cut(s)	1062, 1246, 1743
PspN4I	GGNNCC	2 cut(s)	435, 1732
PspPI	GGNCC	2 cut(s)	62, 923
PstNI	CAGNNNCTG	1 cut(s)	1214
PsuI	RGATCY	1 cut(s)	113
RsaI	GTAC	3 cut(s)	560, 863, 1363
RsaNI	GTAC	3 cut(s)	559, 862, 1362
RseI	CAYNNNNRTG	2 cut(s)	347, 405
SacI	GAGCTC	1 cut(s)	919
SaqAI	TTAA	2 cut(s)	600, 1656
SatI	GCNGC	5 cut(s)	124, 450, 660, 963, 1140
Sau3AI	GATC	6 cut(s)	113, 128, 351, 367, 759, 1195
Sau96I	GGNCC	2 cut(s)	62, 923
SchI	GAGTC	3 cut(s)	218, 378, 1212
ScrFI	CCNGG	7 cut(s)	979, 1041, 1064, 1130, 1131, 1248, 1745
SduI	GDGCHC	4 cut(s)	379, 919, 973, 1053
SfaNI	GCATC	5 cut(s)	1170, 1228, 1251, 1446, 1494
SfcI	CTRYAG	1 cut(s)	1357
SfuI	TTCGAA	3 cut(s)	316, 470, 1268
SinI	GGWCC	2 cut(s)	62, 923
SmaI	CCCGGG	1 cut(s)	1131
SmiMI	CAYNNNNRTG	2 cut(s)	347, 405
SmlI	CTYRAG	1 cut(s)	1339
SmoI	CTYRAG	1 cut(s)	1339
Sse9I	AATT	4 cut(s)	238, 1431, 1451, 1566
SseBI	AGGCCT	1 cut(s)	359
SspMI	CTAG	4 cut(s)	746, 774, 927, 983
SstI	GAGCTC	1 cut(s)	919
StuI	AGGCCT	1 cut(s)	359
StyD4I	CCNGG	7 cut(s)	977, 1039, 1062, 1128, 1129, 1246, 1743
StyI	CCWWGG	1 cut(s)	1590
TaaI	ACNGT	4 cut(s)	940, 1055, 1210, 1553
TasI	AATT	4 cut(s)	238, 1431, 1451, 1566
TatI	WGTACW	1 cut(s)	1361
TauI	GCSGC	3 cut(s)	452, 662, 965
TfiI	GAWTC	3 cut(s)	181, 632, 1375
Tru1I	TTAA	2 cut(s)	600, 1656
Tru9I	TTAA	2 cut(s)	600, 1656
TscAI	CASTG	4 cut(s)	1215, 1287, 1474, 1558
TseFI	GTSAC	2 cut(s)	940, 1204
TseI	GCWGC	2 cut(s)	123, 1139
Tsp45I	GTSAC	2 cut(s)	940, 1204
TspDTI	ATGAA	9 cut(s)	525, 837, 1102, 1340, 1443, 1464, 1524, 1598, 1728
TspGWI	ACGGA	1 cut(s)	199
TspMI	CCCGGG	1 cut(s)	1129
TspRI	CASTG	4 cut(s)	1215, 1287, 1474, 1558
VpaK11BI	GGWCC	2 cut(s)	62, 923
XapI	RAATTY	1 cut(s)	1431
XceI	RCATGY	3 cut(s)	410, 769, 1373
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1724
XmaI	CCCGGG	1 cut(s)	1129
XmnI	GAANNNNTTC	1 cut(s)	503
XspI	CTAG	4 cut(s)	746, 774, 927, 983
Zsp2I	ATGCAT	2 cut(s)	1185, 1509

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.