Rh5AG444900

Protein mrp homolog

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Reverse (-)
76486109 .. 76488199
2091 bp
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UTR
Exon/CDS
Intron
Rh5AG444900.1

Sequence Viewer

Length: 375 bp
ATGTTTTCAAAGTTGAAGCTATCTGCATCTGGAGATAGTGGAGTACCTGAAGTGGTAGCTGATCCTCTAGGTGAAGTTTCGAGGACATTTCAGGAGCTTGGAATATGTGTTGTGCAACAATGTGCTAAGATTCGCCAACAAGTCTCAGCAGCAGTGACCTATGATAAATCTATCAAGGCAATAAGAGTGAGGGTACCAGATTCAGATGATGAATTTCTTCTCCATCCTGCAACTGTGAGACGGAATGACCGCTCTGCCCAAAGTGTGGAGTCTGGAATTGTTGTGCGTCTTTGTGATGTTGGTGCTGCAATCCAAGAAGTGATGGAATCATATGAGGTTGAAATAAATGGGAAGGTGTATCAAGGGACTTTTTGA

Protein Analysis

124

Amino Acids

13.53

Weight (kDa)

5.14

Isoelectric Point (pI)

33.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 193
AccB1I GGYRCC 1 cut(s) 193
AccB7I CCANNNNNTGG 1 cut(s) 265
AccBSI CCGCTC 1 cut(s) 252
AciI CCGC 1 cut(s) 250
AclWI GGATC 1 cut(s) 56
AcsI RAATTY 1 cut(s) 212
AcuI CTGAAG 1 cut(s) 69
AfaI GTAC 2 cut(s) 45, 195
AfiI CCNNNNNNNGG 1 cut(s) 265
AgsI TTSAA 3 cut(s) 9, 16, 341
AluBI AGCT 3 cut(s) 19, 59, 97
AluI AGCT 3 cut(s) 19, 59, 97
Alw26I GTCTC 2 cut(s) 148, 232
AlwI GGATC 1 cut(s) 56
ApeKI GCWGC 2 cut(s) 149, 305
ApoI RAATTY 1 cut(s) 212
Asp700I GAANNNNTTC 1 cut(s) 216
Asp718I GGTACC 1 cut(s) 193
AsuHPI GGTGA 1 cut(s) 83
BanI GGYRCC 1 cut(s) 193
BbvI GCAGC 2 cut(s) 161, 292
BccI CCATC 2 cut(s) 231, 316
BcoDI GTCTC 2 cut(s) 148, 232
BfaI CTAG 1 cut(s) 68
BisI GCNGC 2 cut(s) 150, 306
BlsI GCNGC 2 cut(s) 151, 307
BmiI GGNNCC 1 cut(s) 195
BmsI GCATC 1 cut(s) 35
BpmI CTGGAG 1 cut(s) 51
Bsc4I CCNNNNNNNGG 1 cut(s) 265
BseGI GGATG 1 cut(s) 223
BseLI CCNNNNNNNGG 1 cut(s) 265
BseMII CTCAG 1 cut(s) 159
BseXI GCAGC 2 cut(s) 161, 292
BshNI GGYRCC 1 cut(s) 193
BslI CCNNNNNNNGG 1 cut(s) 265
BsmAI GTCTC 2 cut(s) 148, 232
BsmBI CGTCTC 1 cut(s) 232
Bsp143I GATC 1 cut(s) 61
BspACI CCGC 1 cut(s) 250
BspCNI CTCAG 1 cut(s) 158
BspLI GGNNCC 1 cut(s) 195
BspPI GGATC 1 cut(s) 56
BspT107I GGYRCC 1 cut(s) 193
BsrBI CCGCTC 1 cut(s) 252
BssMI GATC 1 cut(s) 61
Bst4CI ACNGT 1 cut(s) 235
BstDEI CTNAG 2 cut(s) 126, 145
BstF5I GGATG 1 cut(s) 223
BstKTI GATC 1 cut(s) 64
BstMAI GTCTC 2 cut(s) 148, 232
BstMBI GATC 1 cut(s) 61
BstV1I GCAGC 2 cut(s) 161, 292
BtsCI GGATG 1 cut(s) 223
BtsI GCAGTG 1 cut(s) 159
BtsIMutI CAGTG 1 cut(s) 159
CseI GACGC 1 cut(s) 275
Csp6I GTAC 2 cut(s) 44, 194
CviJI RGCY 3 cut(s) 19, 59, 97
CviKI_1 RGCY 3 cut(s) 19, 59, 97
CviQI GTAC 2 cut(s) 44, 194
DdeI CTNAG 2 cut(s) 126, 145
DpnI GATC 1 cut(s) 63
DpnII GATC 1 cut(s) 61
Eco57I CTGAAG 1 cut(s) 69
Esp3I CGTCTC 1 cut(s) 232
FaiI YATR 4 cut(s) 106, 162, 331, 333
FauNDI CATATG 1 cut(s) 331
Fnu4HI GCNGC 2 cut(s) 150, 306
FokI GGATG 1 cut(s) 210
Fsp4HI GCNGC 2 cut(s) 150, 306
FspBI CTAG 1 cut(s) 68
GluI GCNGC 2 cut(s) 150, 306
GsuI CTGGAG 1 cut(s) 51
HgaI GACGC 1 cut(s) 275
HinfI GANTC 4 cut(s) 130, 200, 269, 326
HphI GGTGA 1 cut(s) 83
Hpy188I TCNGA 1 cut(s) 205
Hpy188III TCNNGA 3 cut(s) 30, 92, 273
HpyAV CCTTC 1 cut(s) 346
HpyCH4III ACNGT 1 cut(s) 235
HpyCH4V TGCA 4 cut(s) 26, 115, 230, 308
HpyF3I CTNAG 2 cut(s) 126, 145
KpnI GGTACC 1 cut(s) 197
Kzo9I GATC 1 cut(s) 61
LmnI GCTCC 1 cut(s) 94
LpnPI CCDG 6 cut(s) 15, 60, 77, 210, 240, 258
Lsp1109I GCAGC 2 cut(s) 161, 292
LweI GCATC 1 cut(s) 35
MaeI CTAG 1 cut(s) 68
MaeIII GTNAC 1 cut(s) 154
MalI GATC 1 cut(s) 63
MbiI CCGCTC 1 cut(s) 252
MboI GATC 1 cut(s) 61
MboII GAAGA 1 cut(s) 209
MluCI AATT 2 cut(s) 212, 276
MlyI GAGTC 1 cut(s) 278
MnlI CCTC 4 cut(s) 75, 75, 183, 328
MroXI GAANNNNTTC 1 cut(s) 216
NdeI CATATG 1 cut(s) 331
NdeII GATC 1 cut(s) 61
NlaIV GGNNCC 1 cut(s) 195
NmuCI GTSAC 1 cut(s) 154
PdmI GAANNNNTTC 1 cut(s) 216
PfeI GAWTC 3 cut(s) 130, 200, 326
PflMI CCANNNNNTGG 1 cut(s) 265
PkrI GCNGC 2 cut(s) 151, 307
PleI GAGTC 1 cut(s) 277
PpsI GAGTC 1 cut(s) 277
PspN4I GGNNCC 1 cut(s) 195
RsaI GTAC 2 cut(s) 45, 195
RsaNI GTAC 2 cut(s) 44, 194
SatI GCNGC 2 cut(s) 150, 306
Sau3AI GATC 1 cut(s) 61
SchI GAGTC 1 cut(s) 278
SetI ASST 8 cut(s) 21, 49, 61, 73, 99, 161, 339, 357
SfaNI GCATC 1 cut(s) 35
Sse9I AATT 2 cut(s) 212, 276
SsiI CCGC 1 cut(s) 250
SspMI CTAG 1 cut(s) 68
TaaI ACNGT 1 cut(s) 235
TaqI TCGA 1 cut(s) 80
TasI AATT 2 cut(s) 212, 276
TfiI GAWTC 3 cut(s) 130, 200, 326
TscAI CASTG 1 cut(s) 159
TseFI GTSAC 1 cut(s) 154
TseI GCWGC 2 cut(s) 149, 305
Tsp45I GTSAC 1 cut(s) 154
TspDTI ATGAA 1 cut(s) 225
TspGWI ACGGA 1 cut(s) 256
TspRI CASTG 1 cut(s) 159
Van91I CCANNNNNTGG 1 cut(s) 265
XapI RAATTY 1 cut(s) 212
XmnI GAANNNNTTC 1 cut(s) 216
XspI CTAG 1 cut(s) 68
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.