No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0332011 RchiOBHm_Chr2g0090851 RchiOBHm_Chr2g0147101 RchiOBHm_Chr3g0496131 |
| rosa_multiflora | Rmu_sc0002882.1_g000018 Rmu_sc0030390.1_g000001 |
| rosa_samantha | Rh1DG125700 Rh2AG358500 Rh2AG463300 Rh2CG450100 Rh2DG320200 Rh3AG171400 Rh3AG326900 Rh3BG097800 Rh3BG144000 Rh3BG197000 Rh3CG145400 Rh3CG187900 Rh3DG145200 Rh4AG145300 Rh4AG256400 Rh4BG261800 Rh4DG132600 Rh5AG231200 Rh5AG444900 Rh5BG346900 Rh5CG263900 Rh5CG479600 Rh5DG360000 Rh6CG162300 Rh6DG153900 Rh7AG437000 Rh7BG440000 |
| rosa_wichuraiana | Rw5G029020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 92 |
| AcsI | RAATTY | 4 cut(s) | 80, 115, 136, 159 |
| AgsI | TTSAA | 2 cut(s) | 53, 179 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 106, 127, 138, 159 |
| AluBI | AGCT | 2 cut(s) | 270, 277 |
| AluI | AGCT | 2 cut(s) | 270, 277 |
| Alw26I | GTCTC | 1 cut(s) | 16 |
| Ama87I | CYCGRG | 1 cut(s) | 95 |
| AoxI | GGCC | 1 cut(s) | 44 |
| ApoI | RAATTY | 4 cut(s) | 80, 115, 136, 159 |
| AspLEI | GCGC | 1 cut(s) | 94 |
| AspS9I | GGNCC | 1 cut(s) | 328 |
| AsuHPI | GGTGA | 1 cut(s) | 314 |
| AvaI | CYCGRG | 1 cut(s) | 95 |
| AvaII | GGWCC | 1 cut(s) | 328 |
| BanII | GRGCYC | 1 cut(s) | 102 |
| BcoDI | GTCTC | 1 cut(s) | 16 |
| BfaI | CTAG | 1 cut(s) | 192 |
| Bme18I | GGWCC | 1 cut(s) | 328 |
| BmeT110I | CYCGRG | 1 cut(s) | 95 |
| BmgT120I | GGNCC | 1 cut(s) | 328 |
| Bse118I | RCCGGY | 1 cut(s) | 42 |
| Bse1I | ACTGG | 1 cut(s) | 229 |
| BseNI | ACTGG | 1 cut(s) | 229 |
| BseRI | GAGGAG | 2 cut(s) | 140, 309 |
| Bsh1236I | CGCG | 1 cut(s) | 92 |
| BshFI | GGCC | 1 cut(s) | 46 |
| BsiHKCI | CYCGRG | 1 cut(s) | 95 |
| BsiSI | CCGG | 1 cut(s) | 43 |
| BsmAI | GTCTC | 1 cut(s) | 16 |
| BsnI | GGCC | 1 cut(s) | 46 |
| BsoBI | CYCGRG | 1 cut(s) | 95 |
| Bsp1286I | GDGCHC | 1 cut(s) | 102 |
| Bsp143I | GATC | 1 cut(s) | 257 |
| BspANI | GGCC | 1 cut(s) | 46 |
| BspFNI | CGCG | 1 cut(s) | 92 |
| BsrFI | RCCGGY | 1 cut(s) | 42 |
| BsrI | ACTGG | 1 cut(s) | 229 |
| BssAI | RCCGGY | 1 cut(s) | 42 |
| BssMI | GATC | 1 cut(s) | 257 |
| Bst6I | CTCTTC | 2 cut(s) | 180, 190 |
| BstC8I | GCNNGC | 1 cut(s) | 44 |
| BstFNI | CGCG | 1 cut(s) | 92 |
| BstHHI | GCGC | 1 cut(s) | 94 |
| BstKTI | GATC | 1 cut(s) | 260 |
| BstMAI | GTCTC | 1 cut(s) | 16 |
| BstMBI | GATC | 1 cut(s) | 257 |
| BstUI | CGCG | 1 cut(s) | 92 |
| BsuRI | GGCC | 1 cut(s) | 46 |
| Cac8I | GCNNGC | 1 cut(s) | 44 |
| CfoI | GCGC | 1 cut(s) | 94 |
| Cfr10I | RCCGGY | 1 cut(s) | 42 |
| Cfr13I | GGNCC | 1 cut(s) | 328 |
| CviJI | RGCY | 5 cut(s) | 42, 46, 100, 270, 277 |
| CviKI_1 | RGCY | 5 cut(s) | 42, 46, 100, 270, 277 |
| DpnI | GATC | 1 cut(s) | 259 |
| DpnII | GATC | 1 cut(s) | 257 |
| DraI | TTTAAA | 1 cut(s) | 13 |
| Eam1104I | CTCTTC | 2 cut(s) | 180, 190 |
| EarI | CTCTTC | 2 cut(s) | 180, 190 |
| Eco24I | GRGCYC | 1 cut(s) | 102 |
| Eco47I | GGWCC | 1 cut(s) | 328 |
| Eco88I | CYCGRG | 1 cut(s) | 95 |
| EcoT38I | GRGCYC | 1 cut(s) | 102 |
| FriOI | GRGCYC | 1 cut(s) | 102 |
| FspBI | CTAG | 1 cut(s) | 192 |
| GlaI | GCGC | 1 cut(s) | 93 |
| HaeIII | GGCC | 1 cut(s) | 46 |
| HapII | CCGG | 1 cut(s) | 43 |
| HhaI | GCGC | 1 cut(s) | 94 |
| Hin6I | GCGC | 1 cut(s) | 92 |
| HinP1I | GCGC | 1 cut(s) | 92 |
| HinfI | GANTC | 3 cut(s) | 280, 285, 316 |
| HpaII | CCGG | 1 cut(s) | 43 |
| HphI | GGTGA | 1 cut(s) | 314 |
| Hpy188I | TCNGA | 2 cut(s) | 32, 262 |
| Hpy188III | TCNNGA | 1 cut(s) | 50 |
| HspAI | GCGC | 1 cut(s) | 92 |
| KroI | GCCGGC | 1 cut(s) | 42 |
| KroNI | GCCGGC | 1 cut(s) | 44 |
| Kzo9I | GATC | 1 cut(s) | 257 |
| LmnI | GCTCC | 2 cut(s) | 79, 267 |
| LpnPI | CCDG | 2 cut(s) | 56, 242 |
| MaeI | CTAG | 1 cut(s) | 192 |
| MaeIII | GTNAC | 1 cut(s) | 302 |
| MalI | GATC | 1 cut(s) | 259 |
| MboI | GATC | 1 cut(s) | 257 |
| MboII | GAAGA | 2 cut(s) | 167, 207 |
| MhlI | GDGCHC | 1 cut(s) | 102 |
| MluCI | AATT | 5 cut(s) | 80, 115, 136, 159, 179 |
| MlyI | GAGTC | 2 cut(s) | 294, 310 |
| MroNI | GCCGGC | 1 cut(s) | 42 |
| MseI | TTAA | 3 cut(s) | 12, 182, 218 |
| MspI | CCGG | 1 cut(s) | 43 |
| MvnI | CGCG | 1 cut(s) | 92 |
| NaeI | GCCGGC | 1 cut(s) | 44 |
| NdeII | GATC | 1 cut(s) | 257 |
| NgoMIV | GCCGGC | 1 cut(s) | 42 |
| NmuCI | GTSAC | 1 cut(s) | 302 |
| PdiI | GCCGGC | 1 cut(s) | 44 |
| PfeI | GAWTC | 1 cut(s) | 280 |
| PleI | GAGTC | 2 cut(s) | 293, 310 |
| PpsI | GAGTC | 2 cut(s) | 293, 310 |
| PspPI | GGNCC | 1 cut(s) | 328 |
| SaqAI | TTAA | 3 cut(s) | 12, 182, 218 |
| Sau3AI | GATC | 1 cut(s) | 257 |
| Sau96I | GGNCC | 1 cut(s) | 328 |
| SchI | GAGTC | 2 cut(s) | 294, 310 |
| SduI | GDGCHC | 1 cut(s) | 102 |
| SetI | ASST | 4 cut(s) | 272, 279, 301, 330 |
| SinI | GGWCC | 1 cut(s) | 328 |
| Sse9I | AATT | 5 cut(s) | 80, 115, 136, 159, 179 |
| SspMI | CTAG | 1 cut(s) | 192 |
| TaqI | TCGA | 4 cut(s) | 165, 256, 273, 283 |
| TasI | AATT | 5 cut(s) | 80, 115, 136, 159, 179 |
| TfiI | GAWTC | 1 cut(s) | 280 |
| Tru1I | TTAA | 3 cut(s) | 12, 182, 218 |
| Tru9I | TTAA | 3 cut(s) | 12, 182, 218 |
| TseFI | GTSAC | 1 cut(s) | 302 |
| Tsp45I | GTSAC | 1 cut(s) | 302 |
| VpaK11BI | GGWCC | 1 cut(s) | 328 |
| XapI | RAATTY | 4 cut(s) | 80, 115, 136, 159 |
| XspI | CTAG | 1 cut(s) | 192 |