Transcription factor DYSFUNCTIONAL TAPETUM
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G21330 |
| fragaria_vesca | FvH4_3g03170 |
| malus_domestica | MD10G1309600.v1.1 |
| prunus_persica | Prupe.4G030600_v2.0.a1 |
| pyrus_communis | pycom05g30620 pycom10g26100 |
| rosa_chinensis | RchiOBHm_Chr5g0004791 RchiOBHm_Chr5g0025741 |
| rosa_multiflora | Rmu_sc0008308.1_g000004 Rmu_sc0010871.1_g000026 |
| rosa_roxburghii | Rroxscaffold_1G00053450 Rroxscaffold_1G00054300 |
| rosa_rugosa | Rorug05G0088200 |
| rosa_samantha | Rh5AG041500 Rh5AG180100 Rh5BG041200 Rh5BG178700 Rh5BG178800 Rh5CG045000 Rh5CG196500 Rh5CG196600 Rh5DG041600 Rh5DG178500 |
| rosa_wichuraiana | Rw5G004030 Rw5G016340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 208 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 135 |
| AgsI | TTSAA | 1 cut(s) | 109 |
| AluBI | AGCT | 1 cut(s) | 151 |
| AluI | AGCT | 1 cut(s) | 151 |
| Alw26I | GTCTC | 1 cut(s) | 76 |
| ApeKI | GCWGC | 1 cut(s) | 51 |
| AsuHPI | GGTGA | 1 cut(s) | 167 |
| BbsI | GAAGAC | 1 cut(s) | 99 |
| BbvI | GCAGC | 1 cut(s) | 38 |
| BcoDI | GTCTC | 1 cut(s) | 76 |
| BfmI | CTRYAG | 1 cut(s) | 52 |
| BisI | GCNGC | 1 cut(s) | 52 |
| BlsI | GCNGC | 1 cut(s) | 53 |
| BmcAI | AGTACT | 1 cut(s) | 208 |
| BpiI | GAAGAC | 1 cut(s) | 99 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 135 |
| BseGI | GGATG | 1 cut(s) | 72 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 135 |
| BseRI | GAGGAG | 3 cut(s) | 72, 148, 151 |
| BseXI | GCAGC | 1 cut(s) | 38 |
| BslFI | GGGAC | 1 cut(s) | 170 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 135 |
| BsmAI | GTCTC | 1 cut(s) | 76 |
| BsmFI | GGGAC | 1 cut(s) | 170 |
| BspMAI | CTGCAG | 1 cut(s) | 56 |
| BstF5I | GGATG | 1 cut(s) | 72 |
| BstMAI | GTCTC | 1 cut(s) | 76 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 60 |
| BstSFI | CTRYAG | 1 cut(s) | 52 |
| BstV1I | GCAGC | 1 cut(s) | 38 |
| BstV2I | GAAGAC | 1 cut(s) | 99 |
| BtsCI | GGATG | 1 cut(s) | 72 |
| Csp6I | GTAC | 1 cut(s) | 207 |
| CviAII | CATG | 1 cut(s) | 48 |
| CviJI | RGCY | 2 cut(s) | 151, 163 |
| CviKI_1 | RGCY | 2 cut(s) | 151, 163 |
| CviQI | GTAC | 1 cut(s) | 207 |
| FaeI | CATG | 1 cut(s) | 51 |
| FaiI | YATR | 1 cut(s) | 49 |
| FaqI | GGGAC | 1 cut(s) | 170 |
| FatI | CATG | 1 cut(s) | 47 |
| Fnu4HI | GCNGC | 1 cut(s) | 52 |
| FokI | GGATG | 1 cut(s) | 79 |
| Fsp4HI | GCNGC | 1 cut(s) | 52 |
| GluI | GCNGC | 1 cut(s) | 52 |
| Hin1II | CATG | 1 cut(s) | 51 |
| HinfI | GANTC | 1 cut(s) | 98 |
| HphI | GGTGA | 1 cut(s) | 167 |
| HpyAV | CCTTC | 2 cut(s) | 72, 135 |
| HpyCH4V | TGCA | 3 cut(s) | 11, 54, 203 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 60 |
| Hsp92II | CATG | 1 cut(s) | 51 |
| LpnPI | CCDG | 1 cut(s) | 49 |
| Lsp1109I | GCAGC | 1 cut(s) | 38 |
| MboII | GAAGA | 1 cut(s) | 104 |
| MluCI | AATT | 2 cut(s) | 20, 192 |
| MnlI | CCTC | 5 cut(s) | 50, 53, 126, 129, 131 |
| MseI | TTAA | 2 cut(s) | 14, 220 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 60 |
| NlaIII | CATG | 1 cut(s) | 51 |
| NmeAIII | GCCGAG | 1 cut(s) | 154 |
| PfeI | GAWTC | 1 cut(s) | 98 |
| PkrI | GCNGC | 1 cut(s) | 53 |
| PstI | CTGCAG | 1 cut(s) | 56 |
| RsaI | GTAC | 1 cut(s) | 208 |
| RsaNI | GTAC | 1 cut(s) | 207 |
| SaqAI | TTAA | 2 cut(s) | 14, 220 |
| SatI | GCNGC | 1 cut(s) | 52 |
| ScaI | AGTACT | 1 cut(s) | 208 |
| SetI | ASST | 2 cut(s) | 123, 153 |
| SfcI | CTRYAG | 1 cut(s) | 52 |
| SgeI | CNNG | 7 cut(s) | 60, 76, 101, 137, 142, 164, 216 |
| Sse9I | AATT | 2 cut(s) | 20, 192 |
| TaqI | TCGA | 2 cut(s) | 76, 113 |
| TasI | AATT | 2 cut(s) | 20, 192 |
| TatI | WGTACW | 1 cut(s) | 206 |
| TfiI | GAWTC | 1 cut(s) | 98 |
| Tru1I | TTAA | 2 cut(s) | 14, 220 |
| Tru9I | TTAA | 2 cut(s) | 14, 220 |
| TseI | GCWGC | 1 cut(s) | 51 |
| TspDTI | ATGAA | 2 cut(s) | 90, 168 |
| ZrmI | AGTACT | 1 cut(s) | 208 |