Transcription factor DYSFUNCTIONAL TAPETUM
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DNA_pol3_delta2 | PF13177 | 473 - 630 | 4e-24 | DNA polymerase III, delta subunit |
| AAA | PF00004 | 494 - 627 | 3.5e-06 | ATPase family associated with various cellular activities (AAA) |
| DNA_pol3_gamma3 | PF12169 | 686 - 810 | 1.5e-06 | DNA polymerase III subunits gamma and tau domain III |
| DnaA_N-like_STI | PF23007 | 895 - 975 | 2.9e-28 | STICHEL, DnaA_N-like alpha-beta domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 161 |
| Acc16I | TGCGCA | 1 cut(s) | 65 |
| AccB1I | GGYRCC | 1 cut(s) | 2283 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1555 |
| AccII | CGCG | 1 cut(s) | 3057 |
| AciI | CCGC | 6 cut(s) | 274, 799, 990, 1448, 1575, 3055 |
| AclWI | GGATC | 6 cut(s) | 988, 1001, 1009, 1022, 1566, 2112 |
| AcoI | YGGCCR | 2 cut(s) | 132, 2038 |
| AcsI | RAATTY | 8 cut(s) | 574, 804, 1301, 1420, 1871, 2152, 2706, 2730 |
| AcuI | CTGAAG | 3 cut(s) | 152, 1332, 3458 |
| AfaI | GTAC | 6 cut(s) | 1236, 1385, 1501, 1715, 2429, 2762 |
| AfeI | AGCGCT | 1 cut(s) | 1225 |
| AflIII | ACRYGT | 3 cut(s) | 1801, 2430, 3235 |
| AhlI | ACTAGT | 2 cut(s) | 1195, 2071 |
| AjiI | CACGTC | 1 cut(s) | 1802 |
| AjnI | CCWGG | 5 cut(s) | 5, 267, 709, 1752, 1859 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2487, 2519 |
| Alw21I | GWGCWC | 6 cut(s) | 859, 1111, 1160, 1522, 1795, 2866 |
| Alw26I | GTCTC | 7 cut(s) | 180, 225, 528, 840, 1113, 2904, 3415 |
| AlwI | GGATC | 6 cut(s) | 988, 1001, 1009, 1022, 1566, 2112 |
| Ama87I | CYCGRG | 1 cut(s) | 2894 |
| Aor51HI | AGCGCT | 1 cut(s) | 1225 |
| AoxI | GGCC | 6 cut(s) | 132, 1140, 1636, 2038, 2475, 2952 |
| ApaI | GGGCCC | 1 cut(s) | 2956 |
| ApeKI | GCWGC | 5 cut(s) | 1702, 2238, 2396, 2798, 3089 |
| ApoI | RAATTY | 8 cut(s) | 574, 804, 1301, 1420, 1871, 2152, 2706, 2730 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3184, 3216 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3394 |
| AspA2I | CCTAGG | 1 cut(s) | 3098 |
| AspLEI | GCGC | 3 cut(s) | 66, 1226, 3149 |
| AspS9I | GGNCC | 6 cut(s) | 190, 1490, 1637, 1672, 2952, 2953 |
| AsuC2I | CCSGG | 1 cut(s) | 978 |
| AsuHPI | GGTGA | 3 cut(s) | 56, 266, 1337 |
| AvaI | CYCGRG | 1 cut(s) | 2894 |
| AvaII | GGWCC | 3 cut(s) | 190, 1490, 1672 |
| AvrII | CCTAGG | 1 cut(s) | 3098 |
| BaeGI | GKGCMC | 1 cut(s) | 2956 |
| BalI | TGGCCA | 1 cut(s) | 2040 |
| BamHI | GGATCC | 2 cut(s) | 993, 1014 |
| BanI | GGYRCC | 1 cut(s) | 2283 |
| BanII | GRGCYC | 5 cut(s) | 206, 859, 976, 1160, 2956 |
| BbsI | GAAGAC | 2 cut(s) | 644, 2310 |
| Bbv12I | GWGCWC | 6 cut(s) | 859, 1111, 1160, 1522, 1795, 2866 |
| BbvI | GCAGC | 5 cut(s) | 1689, 2250, 2383, 2810, 3076 |
| BceAI | ACGGC | 4 cut(s) | 810, 812, 1338, 2409 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 753, 787 |
| BciT130I | CCWGG | 5 cut(s) | 7, 269, 711, 1754, 1861 |
| BclI | TGATCA | 4 cut(s) | 55, 1327, 2419, 3118 |
| BcnI | CCSGG | 1 cut(s) | 978 |
| BcoDI | GTCTC | 7 cut(s) | 180, 225, 528, 840, 1113, 2904, 3415 |
| BcuI | ACTAGT | 2 cut(s) | 1195, 2071 |
| BfmI | CTRYAG | 6 cut(s) | 345, 834, 2127, 2448, 2628, 2844 |
| BfoI | RGCGCY | 1 cut(s) | 1227 |
| BglII | AGATCT | 3 cut(s) | 1319, 1405, 3473 |
| BisI | GCNGC | 6 cut(s) | 1576, 1703, 2239, 2397, 2799, 3090 |
| BlnI | CCTAGG | 1 cut(s) | 3098 |
| BlsI | GCNGC | 6 cut(s) | 1577, 1704, 2240, 2398, 2800, 3091 |
| Bme1390I | CCNGG | 6 cut(s) | 7, 269, 711, 978, 1754, 1861 |
| Bme18I | GGWCC | 3 cut(s) | 190, 1490, 1672 |
| BmeT110I | CYCGRG | 1 cut(s) | 2894 |
| BmgBI | CACGTC | 1 cut(s) | 1802 |
| BmgT120I | GGNCC | 6 cut(s) | 190, 1490, 1637, 1672, 2952, 2953 |
| BmiI | GGNNCC | 9 cut(s) | 191, 192, 747, 975, 995, 1016, 2285, 2953, 2954 |
| BmrFI | CCNGG | 6 cut(s) | 7, 269, 711, 978, 1754, 1861 |
| BpiI | GAAGAC | 2 cut(s) | 644, 2310 |
| BpmI | CTGGAG | 2 cut(s) | 360, 1783 |
| BpuEI | CTTGAG | 2 cut(s) | 14, 2744 |
| BpuMI | CCSGG | 1 cut(s) | 978 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2926, 3337 |
| BsaI | GGTCTC | 3 cut(s) | 180, 2904, 3415 |
| BsaWI | WCCGGW | 1 cut(s) | 748 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 958, 988 |
| Bse1I | ACTGG | 2 cut(s) | 1549, 2556 |
| Bse3DI | GCAATG | 5 cut(s) | 520, 1184, 1593, 1925, 2575 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2926, 3337 |
| BseBI | CCWGG | 5 cut(s) | 7, 269, 711, 1754, 1861 |
| BseJI | GATNNNNATC | 2 cut(s) | 2926, 3337 |
| BseMI | GCAATG | 5 cut(s) | 520, 1184, 1593, 1925, 2575 |
| BseMII | CTCAG | 8 cut(s) | 199, 773, 1998, 2018, 2334, 2589, 3283, 3320 |
| BseNI | ACTGG | 2 cut(s) | 1549, 2556 |
| BseRI | GAGGAG | 2 cut(s) | 533, 968 |
| BseSI | GKGCMC | 1 cut(s) | 2956 |
| BseXI | GCAGC | 5 cut(s) | 1689, 2250, 2383, 2810, 3076 |
| BseYI | CCCAGC | 3 cut(s) | 1698, 2612, 3033 |
| BsgI | GTGCAG | 3 cut(s) | 2382, 2817, 2831 |
| Bsh1236I | CGCG | 1 cut(s) | 3057 |
| BshFI | GGCC | 6 cut(s) | 134, 1142, 1638, 2040, 2477, 2954 |
| BshNI | GGYRCC | 1 cut(s) | 2283 |
| BsiHKAI | GWGCWC | 6 cut(s) | 859, 1111, 1160, 1522, 1795, 2866 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2894 |
| BsiSI | CCGG | 2 cut(s) | 749, 978 |
| BslFI | GGGAC | 5 cut(s) | 167, 203, 1428, 2980, 3211 |
| BsmAI | GTCTC | 7 cut(s) | 180, 225, 528, 840, 1113, 2904, 3415 |
| BsmFI | GGGAC | 5 cut(s) | 167, 203, 1428, 2980, 3211 |
| BsmI | GAATGC | 2 cut(s) | 90, 759 |
| BsnI | GGCC | 6 cut(s) | 134, 1142, 1638, 2040, 2477, 2954 |
| Bso31I | GGTCTC | 3 cut(s) | 180, 2904, 3415 |
| BsoBI | CYCGRG | 1 cut(s) | 2894 |
| Bsp120I | GGGCCC | 1 cut(s) | 2952 |
| Bsp1286I | GDGCHC | 9 cut(s) | 206, 859, 976, 1111, 1160, 1522, 1795, 2866, 2956 |
| Bsp19I | CCATGG | 1 cut(s) | 998 |
| BspACI | CCGC | 6 cut(s) | 274, 799, 990, 1448, 1575, 3055 |
| BspANI | GGCC | 6 cut(s) | 134, 1142, 1638, 2040, 2477, 2954 |
| BspCNI | CTCAG | 8 cut(s) | 198, 774, 1999, 2019, 2335, 2588, 3282, 3321 |
| BspFNI | CGCG | 1 cut(s) | 3057 |
| BspHI | TCATGA | 3 cut(s) | 544, 556, 1452 |
| BspLI | GGNNCC | 9 cut(s) | 191, 192, 747, 975, 995, 1016, 2285, 2953, 2954 |
| BspMAI | CTGCAG | 2 cut(s) | 2131, 2452 |
| BspPI | GGATC | 6 cut(s) | 988, 1001, 1009, 1022, 1566, 2112 |
| BspQI | GCTCTTC | 2 cut(s) | 479, 1165 |
| BspT107I | GGYRCC | 1 cut(s) | 2283 |
| BspTNI | GGTCTC | 3 cut(s) | 180, 2904, 3415 |
| BsrDI | GCAATG | 5 cut(s) | 520, 1184, 1593, 1925, 2575 |
| BsrI | ACTGG | 2 cut(s) | 1549, 2556 |
| BssT1I | CCWWGG | 5 cut(s) | 622, 998, 2943, 3098, 3479 |
| Bst2UI | CCWGG | 5 cut(s) | 7, 269, 711, 1754, 1861 |
| Bst4CI | ACNGT | 9 cut(s) | 565, 1713, 1739, 2137, 2146, 2215, 2468, 2809, 2911 |
| Bst6I | CTCTTC | 6 cut(s) | 451, 460, 479, 1165, 3062, 3472 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1590, 2126 |
| BstC8I | GCNNGC | 6 cut(s) | 202, 1434, 1522, 2236, 2452, 2525 |
| BstDSI | CCRYGG | 2 cut(s) | 998, 1354 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3102 |
| BstFNI | CGCG | 1 cut(s) | 3057 |
| BstH2I | RGCGCY | 1 cut(s) | 1227 |
| BstHHI | GCGC | 3 cut(s) | 66, 1226, 3149 |
| BstMAI | GTCTC | 7 cut(s) | 180, 225, 528, 840, 1113, 2904, 3415 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 765, 822, 836, 1313, 1581, 1590, 2126 |
| BstNI | CCWGG | 5 cut(s) | 7, 269, 711, 1754, 1861 |
| BstNSI | RCATGY | 4 cut(s) | 1135, 1390, 2434, 3239 |
| BstSCI | CCNGG | 6 cut(s) | 5, 267, 709, 976, 1752, 1859 |
| BstSFI | CTRYAG | 6 cut(s) | 345, 834, 2127, 2448, 2628, 2844 |
| BstSLI | GKGCMC | 1 cut(s) | 2956 |
| BstUI | CGCG | 1 cut(s) | 3057 |
| BstV1I | GCAGC | 5 cut(s) | 1689, 2250, 2383, 2810, 3076 |
| BstV2I | GAAGAC | 2 cut(s) | 644, 2310 |
| BstX2I | RGATCY | 6 cut(s) | 993, 1014, 1319, 1405, 2104, 3473 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1005, 1804 |
| BstYI | RGATCY | 6 cut(s) | 993, 1014, 1319, 1405, 2104, 3473 |
| BsuRI | GGCC | 6 cut(s) | 134, 1142, 1638, 2040, 2477, 2954 |
| BtgI | CCRYGG | 2 cut(s) | 998, 1354 |
| BtgZI | GCGATG | 1 cut(s) | 1334 |
| BtrI | CACGTC | 1 cut(s) | 1802 |
| BtsI | GCAGTG | 2 cut(s) | 781, 3431 |
| BtsIMutI | CAGTG | 6 cut(s) | 561, 781, 1961, 2805, 3277, 3431 |
| Cac8I | GCNNGC | 6 cut(s) | 202, 1434, 1522, 2236, 2452, 2525 |
| CciI | TCATGA | 3 cut(s) | 544, 556, 1452 |
| CfoI | GCGC | 3 cut(s) | 66, 1226, 3149 |
| Cfr13I | GGNCC | 6 cut(s) | 190, 1490, 1637, 1672, 2952, 2953 |
| CseI | GACGC | 3 cut(s) | 1384, 1965, 2309 |
| Csp6I | GTAC | 6 cut(s) | 1235, 1384, 1500, 1714, 2428, 2761 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 757, 792 |
| CviQI | GTAC | 6 cut(s) | 1235, 1384, 1500, 1714, 2428, 2761 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 161 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 161 |
| EaeI | YGGCCR | 2 cut(s) | 132, 2038 |
| Eam1104I | CTCTTC | 6 cut(s) | 451, 460, 479, 1165, 3062, 3472 |
| EarI | CTCTTC | 6 cut(s) | 451, 460, 479, 1165, 3062, 3472 |
| EciI | GGCGGA | 1 cut(s) | 814 |
| Ecl136II | GAGCTC | 2 cut(s) | 857, 1158 |
| Eco130I | CCWWGG | 5 cut(s) | 622, 998, 2943, 3098, 3479 |
| Eco24I | GRGCYC | 5 cut(s) | 206, 859, 976, 1160, 2956 |
| Eco31I | GGTCTC | 3 cut(s) | 180, 2904, 3415 |
| Eco47I | GGWCC | 3 cut(s) | 190, 1490, 1672 |
| Eco47III | AGCGCT | 1 cut(s) | 1225 |
| Eco53kI | GAGCTC | 2 cut(s) | 857, 1158 |
| Eco57I | CTGAAG | 3 cut(s) | 152, 1332, 3458 |
| Eco88I | CYCGRG | 1 cut(s) | 2894 |
| EcoICRI | GAGCTC | 2 cut(s) | 857, 1158 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3102 |
| EcoO109I | RGGNCCY | 2 cut(s) | 190, 2952 |
| EcoRI | GAATTC | 1 cut(s) | 804 |
| EcoRII | CCWGG | 5 cut(s) | 5, 267, 709, 1752, 1859 |
| EcoT14I | CCWWGG | 5 cut(s) | 622, 998, 2943, 3098, 3479 |
| EcoT22I | ATGCAT | 1 cut(s) | 1207 |
| EcoT38I | GRGCYC | 5 cut(s) | 206, 859, 976, 1160, 2956 |
| ErhI | CCWWGG | 5 cut(s) | 622, 998, 2943, 3098, 3479 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 814, 846 |
| FaqI | GGGAC | 5 cut(s) | 167, 203, 1428, 2980, 3211 |
| FauI | CCCGC | 3 cut(s) | 267, 983, 3062 |
| FauNDI | CATATG | 2 cut(s) | 108, 2832 |
| FbaI | TGATCA | 4 cut(s) | 55, 1327, 2419, 3118 |
| Fnu4HI | GCNGC | 6 cut(s) | 1576, 1703, 2239, 2397, 2799, 3090 |
| FriOI | GRGCYC | 5 cut(s) | 206, 859, 976, 1160, 2956 |
| Fsp4HI | GCNGC | 6 cut(s) | 1576, 1703, 2239, 2397, 2799, 3090 |
| FspI | TGCGCA | 1 cut(s) | 65 |
| GlaI | GCGC | 3 cut(s) | 65, 1225, 3148 |
| GluI | GCNGC | 6 cut(s) | 1576, 1703, 2239, 2397, 2799, 3090 |
| GsaI | CCCAGC | 3 cut(s) | 1702, 2616, 3037 |
| GsuI | CTGGAG | 2 cut(s) | 360, 1783 |
| HaeII | RGCGCY | 1 cut(s) | 1227 |
| HaeIII | GGCC | 6 cut(s) | 134, 1142, 1638, 2040, 2477, 2954 |
| HapII | CCGG | 2 cut(s) | 749, 978 |
| HgaI | GACGC | 3 cut(s) | 1384, 1965, 2309 |
| HhaI | GCGC | 3 cut(s) | 66, 1226, 3149 |
| Hin6I | GCGC | 3 cut(s) | 64, 1224, 3147 |
| HinP1I | GCGC | 3 cut(s) | 64, 1224, 3147 |
| HincII | GTYRAC | 2 cut(s) | 2382, 2680 |
| HindII | GTYRAC | 2 cut(s) | 2382, 2680 |
| HindIII | AAGCTT | 4 cut(s) | 2325, 3311, 3392, 3440 |
| HpaI | GTTAAC | 1 cut(s) | 2382 |
| HpaII | CCGG | 2 cut(s) | 749, 978 |
| HphI | GGTGA | 3 cut(s) | 56, 266, 1337 |
| Hpy166II | GTNNAC | 6 cut(s) | 422, 602, 779, 1672, 2382, 2680 |
| Hpy8I | GTNNAC | 6 cut(s) | 422, 602, 779, 1672, 2382, 2680 |
| Hpy99I | CGWCG | 1 cut(s) | 3390 |
| HpyCH4III | ACNGT | 9 cut(s) | 565, 1713, 1739, 2137, 2146, 2215, 2468, 2809, 2911 |
| HpyCH4IV | ACGT | 3 cut(s) | 1511, 1801, 3400 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 765, 822, 836, 1313, 1581, 1590, 2126 |
| HpySE526I | ACGT | 3 cut(s) | 1511, 1801, 3400 |
| HspAI | GCGC | 3 cut(s) | 64, 1224, 3147 |
| KflI | GGGWCCC | 1 cut(s) | 190 |
| Ksp22I | TGATCA | 4 cut(s) | 55, 1327, 2419, 3118 |
| KspAI | GTTAAC | 1 cut(s) | 2382 |
| LguI | GCTCTTC | 2 cut(s) | 479, 1165 |
| Lsp1109I | GCAGC | 5 cut(s) | 1689, 2250, 2383, 2810, 3076 |
| MaeII | ACGT | 3 cut(s) | 1511, 1801, 3400 |
| MaeIII | GTNAC | 7 cut(s) | 44, 141, 720, 964, 1212, 2199, 3279 |
| MfeI | CAATTG | 4 cut(s) | 653, 769, 2357, 2697 |
| MflI | RGATCY | 6 cut(s) | 993, 1014, 1319, 1405, 2104, 3473 |
| MhlI | GDGCHC | 9 cut(s) | 206, 859, 976, 1111, 1160, 1522, 1795, 2866, 2956 |
| MlsI | TGGCCA | 1 cut(s) | 2040 |
| MluNI | TGGCCA | 1 cut(s) | 2040 |
| MlyI | GAGTC | 4 cut(s) | 530, 634, 2008, 3208 |
| MmeI | TCCRAC | 3 cut(s) | 720, 2431, 2694 |
| Mox20I | TGGCCA | 1 cut(s) | 2040 |
| Mph1103I | ATGCAT | 1 cut(s) | 1207 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3394 |
| MscI | TGGCCA | 1 cut(s) | 2040 |
| MseI | TTAA | 6 cut(s) | 551, 1089, 2139, 2381, 2480, 2538 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1136, 1353 |
| Msp20I | TGGCCA | 1 cut(s) | 2040 |
| MspA1I | CMGCKG | 1 cut(s) | 1702 |
| MspI | CCGG | 2 cut(s) | 749, 978 |
| MspR9I | CCNGG | 6 cut(s) | 7, 269, 711, 978, 1754, 1861 |
| MunI | CAATTG | 4 cut(s) | 653, 769, 2357, 2697 |
| Mva1269I | GAATGC | 2 cut(s) | 90, 759 |
| MvaI | CCWGG | 5 cut(s) | 7, 269, 711, 1754, 1861 |
| MvnI | CGCG | 1 cut(s) | 3057 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 765, 822, 836, 1313, 1581, 1590, 2126 |
| NciI | CCSGG | 1 cut(s) | 978 |
| NcoI | CCATGG | 1 cut(s) | 998 |
| NdeI | CATATG | 2 cut(s) | 108, 2832 |
| NlaIV | GGNNCC | 9 cut(s) | 191, 192, 747, 975, 995, 1016, 2285, 2953, 2954 |
| NmeAIII | GCCGAG | 1 cut(s) | 1204 |
| NmuCI | GTSAC | 7 cut(s) | 44, 141, 720, 964, 1212, 2199, 3279 |
| NsbI | TGCGCA | 1 cut(s) | 65 |
| NsiI | ATGCAT | 1 cut(s) | 1207 |
| NspI | RCATGY | 4 cut(s) | 1135, 1390, 2434, 3239 |
| PagI | TCATGA | 3 cut(s) | 544, 556, 1452 |
| PciI | ACATGT | 2 cut(s) | 2430, 3235 |
| PciSI | GCTCTTC | 2 cut(s) | 479, 1165 |
| PctI | GAATGC | 2 cut(s) | 90, 759 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3394 |
| PfeI | GAWTC | 6 cut(s) | 25, 473, 581, 1079, 2046, 3338 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1555 |
| PfoI | TCCNGGA | 1 cut(s) | 976 |
| PkrI | GCNGC | 6 cut(s) | 1577, 1704, 2240, 2398, 2800, 3091 |
| PleI | GAGTC | 4 cut(s) | 529, 634, 2008, 3207 |
| PpsI | GAGTC | 4 cut(s) | 529, 634, 2008, 3207 |
| PpuMI | RGGWCCY | 1 cut(s) | 190 |
| PscI | ACATGT | 2 cut(s) | 2430, 3235 |
| Psp124BI | GAGCTC | 2 cut(s) | 859, 1160 |
| Psp5II | RGGWCCY | 1 cut(s) | 190 |
| Psp6I | CCWGG | 5 cut(s) | 5, 267, 709, 1752, 1859 |
| PspFI | CCCAGC | 3 cut(s) | 1698, 2612, 3033 |
| PspGI | CCWGG | 5 cut(s) | 5, 267, 709, 1752, 1859 |
| PspN4I | GGNNCC | 9 cut(s) | 191, 192, 747, 975, 995, 1016, 2285, 2953, 2954 |
| PspOMI | GGGCCC | 1 cut(s) | 2952 |
| PspPI | GGNCC | 6 cut(s) | 190, 1490, 1637, 1672, 2952, 2953 |
| PspPPI | RGGWCCY | 1 cut(s) | 190 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1706, 1738 |
| PstI | CTGCAG | 2 cut(s) | 2131, 2452 |
| PsuI | RGATCY | 6 cut(s) | 993, 1014, 1319, 1405, 2104, 3473 |
| PvuII | CAGCTG | 1 cut(s) | 1702 |
| RsaI | GTAC | 6 cut(s) | 1236, 1385, 1501, 1715, 2429, 2762 |
| RsaNI | GTAC | 6 cut(s) | 1235, 1384, 1500, 1714, 2428, 2761 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1136, 1353 |
| SacI | GAGCTC | 2 cut(s) | 859, 1160 |
| SapI | GCTCTTC | 2 cut(s) | 479, 1165 |
| SaqAI | TTAA | 6 cut(s) | 551, 1089, 2139, 2381, 2480, 2538 |
| SatI | GCNGC | 6 cut(s) | 1576, 1703, 2239, 2397, 2799, 3090 |
| Sau96I | GGNCC | 6 cut(s) | 190, 1490, 1637, 1672, 2952, 2953 |
| SchI | GAGTC | 4 cut(s) | 530, 634, 2008, 3208 |
| ScrFI | CCNGG | 6 cut(s) | 7, 269, 711, 978, 1754, 1861 |
| SduI | GDGCHC | 9 cut(s) | 206, 859, 976, 1111, 1160, 1522, 1795, 2866, 2956 |
| SfcI | CTRYAG | 6 cut(s) | 345, 834, 2127, 2448, 2628, 2844 |
| SinI | GGWCC | 3 cut(s) | 190, 1490, 1672 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1136, 1353 |
| SmlI | CTYRAG | 2 cut(s) | 29, 2723 |
| SmoI | CTYRAG | 2 cut(s) | 29, 2723 |
| SpeI | ACTAGT | 2 cut(s) | 1195, 2071 |
| SsiI | CCGC | 6 cut(s) | 274, 799, 990, 1448, 1575, 3055 |
| SspI | AATATT | 1 cut(s) | 1651 |
| SstI | GAGCTC | 2 cut(s) | 859, 1160 |
| StyD4I | CCNGG | 6 cut(s) | 5, 267, 709, 976, 1752, 1859 |
| StyI | CCWWGG | 5 cut(s) | 622, 998, 2943, 3098, 3479 |
| TaaI | ACNGT | 9 cut(s) | 565, 1713, 1739, 2137, 2146, 2215, 2468, 2809, 2911 |
| TaiI | ACGT | 3 cut(s) | 1514, 1804, 3403 |
| TaqI | TCGA | 9 cut(s) | 178, 307, 763, 808, 1154, 1731, 1789, 3347, 3388 |
| TatI | WGTACW | 3 cut(s) | 1383, 1713, 2427 |
| TauI | GCSGC | 1 cut(s) | 1578 |
| TfiI | GAWTC | 6 cut(s) | 25, 473, 581, 1079, 2046, 3338 |
| Tru1I | TTAA | 6 cut(s) | 551, 1089, 2139, 2381, 2480, 2538 |
| Tru9I | TTAA | 6 cut(s) | 551, 1089, 2139, 2381, 2480, 2538 |
| TscAI | CASTG | 6 cut(s) | 568, 781, 1968, 2812, 3277, 3438 |
| TseFI | GTSAC | 7 cut(s) | 44, 141, 720, 964, 1212, 2199, 3279 |
| TseI | GCWGC | 5 cut(s) | 1702, 2238, 2396, 2798, 3089 |
| Tsp45I | GTSAC | 7 cut(s) | 44, 141, 720, 964, 1212, 2199, 3279 |
| TspGWI | ACGGA | 1 cut(s) | 3166 |
| TspRI | CASTG | 6 cut(s) | 568, 781, 1968, 2812, 3277, 3438 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1555 |
| VpaK11BI | GGWCC | 3 cut(s) | 190, 1490, 1672 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3102 |
| XapI | RAATTY | 8 cut(s) | 574, 804, 1301, 1420, 1871, 2152, 2706, 2730 |
| XbaI | TCTAGA | 1 cut(s) | 2017 |
| XceI | RCATGY | 4 cut(s) | 1135, 1390, 2434, 3239 |
| XmaJI | CCTAGG | 1 cut(s) | 3098 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3394 |
| Zsp2I | ATGCAT | 1 cut(s) | 1207 |