RchiOBHm_Chr5g0025681

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
19567326 .. 19570421
3096 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30531

Sequence Viewer

Length: 1647 bp
ATGAGTACCACTGGATTCCCAGTATTCATTGTTTCAAGCTTTGTGTTTCTGTTCCTTCTGATCTTCAAGATCTATCACACACAATGGCGGACTCCCACTTGCCTACAGAAACTGATGGGTCTGCAGGGAATCAAGGGCCCTTCTTACAGACTTGTCCATGGAAACGCAAAAGAAATCTTGAACTTGAAAAAGGAGGCCATGAGCAGACCCAAAGGTTTATCACATGACATATTTCCTATAGTTCAACCTCAGTATCACTCGTGGCTTAAGATATATGGAAAGATTTTTCTTCAGTGGTTAGGTACCGAAGCTCAGTTGGTGGTTATGGAACCTAAGTTGTGCAAAGAGATACTGAATAACAAAGACAGAGTTTATCTGCAAATGAAACAACAAGGGTTTGGGAAGAAGCTGATAGGAAACGGCCTCGGGACTTCTGAAGGAGAACAATGGCTAAAACTTCGAAAGTTGGCCAACCACGCCTTCCATGGAGAGAGCTTAAAAAATATGGTTCCAGATATGATAGCTAGTGCTGAGAACATGCTACAAAGGTTGCAAAATAGCGAGGGCAAAGAGATCGAGATGTATCAAGAATTTAAGTTGTTTACTTCAGAAGTGATTTCCAGGACAGCATTTGGTAGTAGCTATTTACAAGGGAAGAAAATTTTTGACATGTTGACGGAGATATCCTTGTTATTGTTCAAAAATTCTTATAAGATCAGGCTTCCTGGTATCCGAAAGCTTTTCAAAACTAGTGATGAAATTCAAGCAGAGAAGCTTGAGAAGGAAATACGTGACACGATACTGGAGATTGTAAAGAAAAGAGAAAACAAAGCAGTGACTCAGCAAGATGAACACAACTTTGGGGGGGATTTTCTTGGATTACTTTTAAAGGCTCATCATGATGACTGTAATGACAGATATAGGGTCACGAAAGATGATATAATTGATCAATGCAAGGCATTGTACTTTGCTGGACAAGAAACCACTAATGGTTTGTTGGCTTGGACCGTCTTTCTTCTGGCACTCCATCAGGATTGGCAAGAGGAAGCAAGAAAAGAAGTCCTGCAATTATTTGGAAAACAGAATCCAAATTCTGACGGCATTTCCAGACTAAAAACTGTAAGAATGTCAATAACCGTTACACTGAAATTGTCATCAGTTAAGTACGAAATCCTGATTTCTGTTCTGTCTCATTTTGTTTCGATCTTCTTAATGCAGATGAATATGATCATCAATGAGTCTCTAAGGTTATATCCTCCTGTTAGTCAACTTGTAAAGAAAGCTGAAAGGAAAAGTAGGCTGGGGAAGTTAATTGTTCCTGCTAATATTGATTTGGTCATCCCAACTGTAGCACTTCACCATGACCCTCAAATATGGGGACAAGATGTGGAACTTTTCAAACCAGAGCGGTTCTCAGAAGGGGTTGCCAAAGCCACTAAGGATAATATGGCTGCATTCATACCCTTTGGAATGGGACCTAGAATTTGTGTGGGTTTCAACTTTGCCACCACTGAAACTAAAATTGCTCTGTCAATGATTCTGCAACGCTACGCCTTCACTCTTTCCCTGGGTTACGTCCACTCTCCTCTTCATTTTCTTACAGTTCGCCCACAGCATGGAGTTCAAGTAATGCTACACTCACTGTGA

Protein Analysis

548

Amino Acids

62.74

Weight (kDa)

9.41

Isoelectric Point (pI)

31.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 90 - 385 4.8e-39 Cytochrome P450
p450 PF00067 407 - 532 2.9e-30 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 711
Acc65I GGTACC 1 cut(s) 302
AccB1I GGYRCC 1 cut(s) 302
AccB7I CCANNNNNTGG 1 cut(s) 1616
AccBSI CCGCTC 1 cut(s) 1408
AciI CCGC 2 cut(s) 88, 1408
AcoI YGGCCR 1 cut(s) 468
AcsI RAATTY 6 cut(s) 590, 660, 703, 759, 1090, 1482
AcuI CTGAAG 3 cut(s) 275, 456, 591
AfaI GTAC 4 cut(s) 7, 304, 965, 1166
AfiI CCNNNNNNNGG 1 cut(s) 1616
AflII CTTAAG 1 cut(s) 266
AflIII ACRYGT 1 cut(s) 669
AhlI ACTAGT 1 cut(s) 749
AjnI CCWGG 3 cut(s) 620, 724, 1566
AjuI GAANNNNNNNTTGG 4 cut(s) 464, 496, 843, 875
AluBI AGCT 9 cut(s) 39, 311, 409, 495, 524, 642, 739, 775, 1283
AluI AGCT 9 cut(s) 39, 311, 409, 495, 524, 642, 739, 775, 1283
Alw26I GTCTC 2 cut(s) 1194, 1245
AlwNI CAGNNNCTG 1 cut(s) 112
Ama87I CYCGRG 1 cut(s) 425
AoxI GGCC 4 cut(s) 136, 195, 421, 468
ApaI GGGCCC 1 cut(s) 140
ApeKI GCWGC 1 cut(s) 1451
ApoI RAATTY 6 cut(s) 590, 660, 703, 759, 1090, 1482
ArsI GACNNNNNNTTYG 2 cut(s) 1467, 1499
Asp718I GGTACC 1 cut(s) 302
AspS9I GGNCC 4 cut(s) 136, 137, 1005, 1475
AsuHPI GGTGA 1 cut(s) 1349
AsuII TTCGAA 1 cut(s) 460
AvaI CYCGRG 1 cut(s) 425
AvaII GGWCC 2 cut(s) 1005, 1475
BaeGI GKGCMC 1 cut(s) 140
BaeI ACNNNNGTAYC 2 cut(s) 236, 269
BalI TGGCCA 1 cut(s) 470
BanI GGYRCC 1 cut(s) 302
BanII GRGCYC 1 cut(s) 140
BauI CACGAG 1 cut(s) 259
BbvI GCAGC 1 cut(s) 1438
BccI CCATC 2 cut(s) 109, 1035
BceAI ACGGC 2 cut(s) 436, 1114
BcgI CGANNNNNNTGC 2 cut(s) 556, 590
BciT130I CCWGG 3 cut(s) 622, 726, 1568
BciVI GTATCC 1 cut(s) 740
BclI TGATCA 2 cut(s) 946, 1227
BcoDI GTCTC 2 cut(s) 1194, 1245
BcuI ACTAGT 1 cut(s) 749
BfaI CTAG 3 cut(s) 525, 750, 1479
BfmI CTRYAG 4 cut(s) 104, 122, 237, 1347
BfrI CTTAAG 1 cut(s) 266
BfuI GTATCC 1 cut(s) 740
BglII AGATCT 1 cut(s) 69
BisI GCNGC 1 cut(s) 1452
BlsI GCNGC 1 cut(s) 1453
Bme1390I CCNGG 3 cut(s) 622, 726, 1568
Bme18I GGWCC 2 cut(s) 1005, 1475
BmeT110I CYCGRG 1 cut(s) 425
BmgT120I GGNCC 4 cut(s) 136, 137, 1005, 1475
BmiI GGNNCC 5 cut(s) 138, 304, 330, 510, 1476
BmrFI CCNGG 3 cut(s) 622, 726, 1568
BmrI ACTGGG 1 cut(s) 14
BmuI ACTGGG 1 cut(s) 14
BplI GAGNNNNNCTC 2 cut(s) 1397, 1429
BpmI CTGGAG 1 cut(s) 824
Bpu14I TTCGAA 1 cut(s) 460
BpuEI CTTGAG 1 cut(s) 797
BsaAI YACGTR 1 cut(s) 791
BsaJI CCNNGG 5 cut(s) 157, 424, 484, 1566, 1567
BsaXI ACNNNNNCTCC 2 cut(s) 1611, 1641
Bsc4I CCNNNNNNNGG 1 cut(s) 1616
Bse1I ACTGG 3 cut(s) 16, 20, 807
BseBI CCWGG 3 cut(s) 622, 726, 1568
BseDI CCNNGG 5 cut(s) 157, 424, 484, 1566, 1567
BseGI GGATG 1 cut(s) 1338
BseLI CCNNNNNNNGG 1 cut(s) 1616
BseMII CTCAG 5 cut(s) 263, 326, 522, 854, 1428
BseNI ACTGG 3 cut(s) 16, 20, 807
BseRI GAGGAG 1 cut(s) 1575
BseSI GKGCMC 1 cut(s) 140
BseXI GCAGC 1 cut(s) 1438
BseYI CCCAGC 1 cut(s) 1300
BshFI GGCC 4 cut(s) 138, 197, 423, 470
BshNI GGYRCC 1 cut(s) 302
BsiHKCI CYCGRG 1 cut(s) 425
BslFI GGGAC 3 cut(s) 442, 1392, 1488
BslI CCNNNNNNNGG 1 cut(s) 1616
BsmAI GTCTC 2 cut(s) 1194, 1245
BsmFI GGGAC 3 cut(s) 442, 1392, 1488
BsmI GAATGC 1 cut(s) 1454
BsnI GGCC 4 cut(s) 138, 197, 423, 470
BsoBI CYCGRG 1 cut(s) 425
Bsp119I TTCGAA 1 cut(s) 460
Bsp120I GGGCCC 1 cut(s) 136
Bsp1286I GDGCHC 1 cut(s) 140
Bsp143I GATC 7 cut(s) 60, 69, 573, 714, 946, 1203, 1227
Bsp19I CCATGG 2 cut(s) 157, 484
BspACI CCGC 2 cut(s) 88, 1408
BspANI GGCC 4 cut(s) 138, 197, 423, 470
BspCNI CTCAG 5 cut(s) 262, 325, 523, 853, 1427
BspHI TCATGA 1 cut(s) 898
BspLI GGNNCC 5 cut(s) 138, 304, 330, 510, 1476
BspMAI CTGCAG 1 cut(s) 126
BspT104I TTCGAA 1 cut(s) 460
BspT107I GGYRCC 1 cut(s) 302
BspTI CTTAAG 1 cut(s) 266
BsrBI CCGCTC 1 cut(s) 1408
BsrI ACTGG 3 cut(s) 16, 20, 807
BssECI CCNNGG 5 cut(s) 157, 424, 484, 1566, 1567
BssMI GATC 7 cut(s) 60, 69, 573, 714, 946, 1203, 1227
BssSI CACGAG 1 cut(s) 259
BssT1I CCWWGG 2 cut(s) 157, 484
Bst2BI CACGAG 1 cut(s) 259
Bst2UI CCWGG 3 cut(s) 622, 726, 1568
Bst4CI ACNGT 7 cut(s) 908, 1009, 1120, 1138, 1348, 1603, 1644
Bst6I CTCTTC 1 cut(s) 1593
BstAFI CTTAAG 1 cut(s) 266
BstBAI YACGTR 1 cut(s) 791
BstBI TTCGAA 1 cut(s) 460
BstDEI CTNAG 8 cut(s) 249, 312, 333, 531, 840, 1244, 1414, 1437
BstDSI CCRYGG 2 cut(s) 157, 484
BstF5I GGATG 1 cut(s) 1338
BstKTI GATC 7 cut(s) 63, 72, 576, 717, 949, 1206, 1230
BstMAI GTCTC 2 cut(s) 1194, 1245
BstMBI GATC 7 cut(s) 60, 69, 573, 714, 946, 1203, 1227
BstMWI GCNNNNNNNGC 1 cut(s) 476
BstNI CCWGG 3 cut(s) 622, 726, 1568
BstNSI RCATGY 2 cut(s) 541, 673
BstSCI CCNGG 3 cut(s) 620, 724, 1566
BstSFI CTRYAG 4 cut(s) 104, 122, 237, 1347
BstSLI GKGCMC 1 cut(s) 140
BstV1I GCAGC 1 cut(s) 1438
BstX2I RGATCY 1 cut(s) 69
BstYI RGATCY 1 cut(s) 69
BsuI GTATCC 1 cut(s) 740
BsuRI GGCC 4 cut(s) 138, 197, 423, 470
BtgI CCRYGG 2 cut(s) 157, 484
BtsCI GGATG 1 cut(s) 1338
BtsI GCAGTG 1 cut(s) 840
BtsIMutI CAGTG 6 cut(s) 9, 299, 840, 1142, 1509, 1640
CaiI CAGNNNCTG 1 cut(s) 112
CciI TCATGA 1 cut(s) 898
Cfr13I GGNCC 4 cut(s) 136, 137, 1005, 1475
Csp6I GTAC 4 cut(s) 6, 303, 964, 1165
CviAII CATG 9 cut(s) 158, 199, 224, 485, 538, 670, 899, 1361, 1616
CviQI GTAC 4 cut(s) 6, 303, 964, 1165
DdeI CTNAG 8 cut(s) 249, 312, 333, 531, 840, 1244, 1414, 1437
DpnI GATC 7 cut(s) 62, 71, 575, 716, 948, 1205, 1229
DpnII GATC 7 cut(s) 60, 69, 573, 714, 946, 1203, 1227
DraI TTTAAA 1 cut(s) 888
EaeI YGGCCR 1 cut(s) 468
Eam1104I CTCTTC 1 cut(s) 1593
EarI CTCTTC 1 cut(s) 1593
EciI GGCGGA 1 cut(s) 103
Eco130I CCWWGG 2 cut(s) 157, 484
Eco24I GRGCYC 1 cut(s) 140
Eco32I GATATC 1 cut(s) 684
Eco47I GGWCC 2 cut(s) 1005, 1475
Eco57I CTGAAG 3 cut(s) 275, 456, 591
Eco88I CYCGRG 1 cut(s) 425
EcoO109I RGGNCCY 3 cut(s) 136, 137, 1475
EcoRII CCWGG 3 cut(s) 620, 724, 1566
EcoRV GATATC 1 cut(s) 684
EcoT14I CCWWGG 2 cut(s) 157, 484
EcoT38I GRGCYC 1 cut(s) 140
ErhI CCWWGG 2 cut(s) 157, 484
FaeI CATG 9 cut(s) 161, 202, 227, 488, 541, 673, 902, 1364, 1619
FaqI GGGAC 3 cut(s) 442, 1392, 1488
FatI CATG 9 cut(s) 157, 198, 223, 484, 537, 669, 898, 1360, 1615
FbaI TGATCA 2 cut(s) 946, 1227
Fnu4HI GCNGC 1 cut(s) 1452
FokI GGATG 1 cut(s) 1325
FriOI GRGCYC 1 cut(s) 140
Fsp4HI GCNGC 1 cut(s) 1452
FspBI CTAG 3 cut(s) 525, 750, 1479
GluI GCNGC 1 cut(s) 1452
GsaI CCCAGC 1 cut(s) 1304
GsuI CTGGAG 1 cut(s) 824
HaeIII GGCC 4 cut(s) 138, 197, 423, 470
Hin1II CATG 9 cut(s) 161, 202, 227, 488, 541, 673, 902, 1364, 1619
HincII GTYRAC 2 cut(s) 675, 1268
HindII GTYRAC 2 cut(s) 675, 1268
HindIII AAGCTT 3 cut(s) 37, 737, 773
HinfI GANTC 7 cut(s) 15, 91, 129, 838, 1084, 1238, 1537
HphI GGTGA 1 cut(s) 1349
Hpy166II GTNNAC 4 cut(s) 603, 675, 1268, 1579
Hpy188I TCNGA 6 cut(s) 60, 436, 610, 734, 1096, 1417
Hpy8I GTNNAC 4 cut(s) 603, 675, 1268, 1579
HpyAV CCTTC 7 cut(s) 65, 150, 431, 490, 775, 1412, 1564
HpyCH4III ACNGT 7 cut(s) 908, 1009, 1120, 1138, 1348, 1603, 1644
HpyCH4IV ACGT 2 cut(s) 790, 1575
HpyCH4V TGCA 9 cut(s) 124, 342, 379, 553, 954, 1066, 1216, 1454, 1543
HpyF10VI GCNNNNNNNGC 1 cut(s) 476
HpyF3I CTNAG 8 cut(s) 249, 312, 333, 531, 840, 1244, 1414, 1437
HpySE526I ACGT 2 cut(s) 790, 1575
Hsp92II CATG 9 cut(s) 161, 202, 227, 488, 541, 673, 902, 1364, 1619
KpnI GGTACC 1 cut(s) 306
Ksp22I TGATCA 2 cut(s) 946, 1227
Kzo9I GATC 7 cut(s) 60, 69, 573, 714, 946, 1203, 1227
Lsp1109I GCAGC 1 cut(s) 1438
MaeI CTAG 3 cut(s) 525, 750, 1479
MaeII ACGT 2 cut(s) 790, 1575
MaeIII GTNAC 5 cut(s) 791, 835, 925, 1138, 1571
MalI GATC 7 cut(s) 62, 71, 575, 716, 948, 1205, 1229
MbiI CCGCTC 1 cut(s) 1408
MboI GATC 7 cut(s) 60, 69, 573, 714, 946, 1203, 1227
MboII GAAGA 7 cut(s) 55, 281, 415, 667, 1007, 1198, 1580
MflI RGATCY 1 cut(s) 69
MhlI GDGCHC 1 cut(s) 140
MlsI TGGCCA 1 cut(s) 470
MluNI TGGCCA 1 cut(s) 470
MlyI GAGTC 3 cut(s) 85, 832, 1247
MnlI CCTC 8 cut(s) 187, 258, 434, 556, 1036, 1266, 1377, 1596
Mox20I TGGCCA 1 cut(s) 470
MscI TGGCCA 1 cut(s) 470
MseI TTAA 7 cut(s) 267, 497, 594, 887, 1161, 1211, 1310
MslI CAYNNNNRTG 1 cut(s) 900
Msp20I TGGCCA 1 cut(s) 470
MspCI CTTAAG 1 cut(s) 266
MspR9I CCNGG 3 cut(s) 622, 726, 1568
Mva1269I GAATGC 1 cut(s) 1454
MvaI CCWGG 3 cut(s) 622, 726, 1568
MwoI GCNNNNNNNGC 1 cut(s) 476
NcoI CCATGG 2 cut(s) 157, 484
NdeII GATC 7 cut(s) 60, 69, 573, 714, 946, 1203, 1227
NlaIII CATG 9 cut(s) 161, 202, 227, 488, 541, 673, 902, 1364, 1619
NlaIV GGNNCC 5 cut(s) 138, 304, 330, 510, 1476
NmuCI GTSAC 3 cut(s) 791, 835, 925
NspI RCATGY 2 cut(s) 541, 673
NspV TTCGAA 1 cut(s) 460
PagI TCATGA 1 cut(s) 898
PasI CCCWGGG 1 cut(s) 1567
PciI ACATGT 1 cut(s) 669
PctI GAATGC 1 cut(s) 1454
PfeI GAWTC 4 cut(s) 15, 129, 1084, 1537
PflMI CCANNNNNTGG 1 cut(s) 1616
PfoI TCCNGGA 1 cut(s) 620
PkrI GCNGC 1 cut(s) 1453
PleI GAGTC 3 cut(s) 85, 832, 1246
PpsI GAGTC 3 cut(s) 85, 832, 1246
Ppu21I YACGTR 1 cut(s) 791
PpuMI RGGWCCY 1 cut(s) 1475
PscI ACATGT 1 cut(s) 669
PsiI TTATAA 1 cut(s) 711
Psp5II RGGWCCY 1 cut(s) 1475
Psp6I CCWGG 3 cut(s) 620, 724, 1566
PspFI CCCAGC 1 cut(s) 1300
PspGI CCWGG 3 cut(s) 620, 724, 1566
PspN4I GGNNCC 5 cut(s) 138, 304, 330, 510, 1476
PspOMI GGGCCC 1 cut(s) 136
PspPI GGNCC 4 cut(s) 136, 137, 1005, 1475
PspPPI RGGWCCY 1 cut(s) 1475
PstI CTGCAG 1 cut(s) 126
PstNI CAGNNNCTG 1 cut(s) 112
PsuI RGATCY 1 cut(s) 69
RsaI GTAC 4 cut(s) 7, 304, 965, 1166
RsaNI GTAC 4 cut(s) 6, 303, 964, 1165
RseI CAYNNNNRTG 1 cut(s) 900
SaqAI TTAA 7 cut(s) 267, 497, 594, 887, 1161, 1211, 1310
SatI GCNGC 1 cut(s) 1452
Sau3AI GATC 7 cut(s) 60, 69, 573, 714, 946, 1203, 1227
Sau96I GGNCC 4 cut(s) 136, 137, 1005, 1475
SchI GAGTC 3 cut(s) 85, 832, 1247
ScrFI CCNGG 3 cut(s) 622, 726, 1568
SduI GDGCHC 1 cut(s) 140
SfcI CTRYAG 4 cut(s) 104, 122, 237, 1347
SfuI TTCGAA 1 cut(s) 460
SinI GGWCC 2 cut(s) 1005, 1475
SmiMI CAYNNNNRTG 1 cut(s) 900
SmlI CTYRAG 2 cut(s) 266, 776
SmoI CTYRAG 2 cut(s) 266, 776
SpeI ACTAGT 1 cut(s) 749
SsiI CCGC 2 cut(s) 88, 1408
SspI AATATT 1 cut(s) 1327
SspMI CTAG 3 cut(s) 525, 750, 1479
StyD4I CCNGG 3 cut(s) 620, 724, 1566
StyI CCWWGG 2 cut(s) 157, 484
TaaI ACNGT 7 cut(s) 908, 1009, 1120, 1138, 1348, 1603, 1644
TaiI ACGT 2 cut(s) 793, 1578
TaqI TCGA 3 cut(s) 460, 576, 1202
TatI WGTACW 1 cut(s) 963
TfiI GAWTC 4 cut(s) 15, 129, 1084, 1537
Tru1I TTAA 7 cut(s) 267, 497, 594, 887, 1161, 1211, 1310
Tru9I TTAA 7 cut(s) 267, 497, 594, 887, 1161, 1211, 1310
TscAI CASTG 6 cut(s) 16, 299, 840, 1149, 1516, 1647
TseFI GTSAC 3 cut(s) 791, 835, 925
TseI GCWGC 1 cut(s) 1451
Tsp45I GTSAC 3 cut(s) 791, 835, 925
TspDTI ATGAA 7 cut(s) 16, 398, 771, 864, 1235, 1447, 1580
TspGWI ACGGA 1 cut(s) 692
TspRI CASTG 6 cut(s) 16, 299, 840, 1149, 1516, 1647
Van91I CCANNNNNTGG 1 cut(s) 1616
Vha464I CTTAAG 1 cut(s) 266
VpaK11BI GGWCC 2 cut(s) 1005, 1475
XapI RAATTY 6 cut(s) 590, 660, 703, 759, 1090, 1482
XceI RCATGY 2 cut(s) 541, 673
XcmI CCANNNNNNNNNTGG 1 cut(s) 482
XspI CTAG 3 cut(s) 525, 750, 1479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.