FvH4_3g32750

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
28071107 .. 28072963
1857 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g32750.t1

Sequence Viewer

Length: 672 bp
ATGGAGGCAATCATTGGAGAAGACAAGAGTTTTGGTAATGATTTTCTAGGACTGCTTTTAGAGGCTCATCACGCTTCGGATGATAAGCAGAAGATTTCGATTGATGAGTTGGTTGAGGAATGCAGGACTTTTTACTTTGCTGGACAAGAGACTACTAATTCTGTCTTGGATTATCCTTCTTCTGGCACAGCACCACTATTGGCAAGAGGAAGCAAGAAAAGAGGTGCTGCAGTTATGAGTATGATTATGAATGAGACCCTAAGGTTATATCCTCCTGCTATTTTGAGTTCAAGGAAGGTTGCAAGGGAAACTAGACTGGGAAAGCTCCTACTTCCGGCTAATATGAAGCTGATTGTCCCACCTCTGGCACTTCAACATGATGCTCAGCTCTGGGGACAAGATGTGGGTTTGTTCAAACCAGAGCGATTCTCTGAAGGAGTTGCGAAAGCAACTAACGATAACATGGCTGCATTCATGGCCTTTGGAACGGGGCCTAGAATGTGTGTGGGATTCAACTTTGCAGCCATTGAAATAAAGACTGCTCTGTCAATGATTCTGCAACGCTACTCATTTACCCTTTCTCCAGGTTATGTCCACTCGCCTTATCCGCTGATTACCATTTCGGCCACAACATGGAGTTCAAGTAATACTACACTCACTCTGATCTGGTGA

Protein Analysis

224

Amino Acids

24.51

Weight (kDa)

6.91

Isoelectric Point (pI)

37.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 79 - 196 5.3e-28 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 544
AccB7I CCANNNNNTGG 1 cut(s) 633
AciI CCGC 1 cut(s) 608
AcoI YGGCCR 1 cut(s) 624
AcuI CTGAAG 1 cut(s) 453
AfiI CCNNNNNNNGG 4 cut(s) 182, 334, 364, 633
AgsI TTSAA 6 cut(s) 291, 374, 415, 514, 530, 642
AjnI CCWGG 1 cut(s) 583
AluBI AGCT 3 cut(s) 325, 349, 388
AluI AGCT 3 cut(s) 325, 349, 388
Alw26I GTCTC 2 cut(s) 143, 248
AoxI GGCC 3 cut(s) 477, 491, 624
ApeKI GCWGC 3 cut(s) 227, 467, 521
ArsI GACNNNNNNTTYG 2 cut(s) 14, 46
AspS9I GGNCC 1 cut(s) 491
AxyI CCTNAGG 1 cut(s) 260
BbsI GAAGAC 1 cut(s) 27
BbvI GCAGC 3 cut(s) 214, 454, 533
BciT130I CCWGG 1 cut(s) 585
BcoDI GTCTC 2 cut(s) 143, 248
BfaI CTAG 3 cut(s) 47, 312, 495
BfmI CTRYAG 1 cut(s) 228
BisI GCNGC 3 cut(s) 228, 468, 522
BlpI GCTNAGC 1 cut(s) 384
BlsI GCNGC 3 cut(s) 229, 469, 523
Bme1390I CCNGG 1 cut(s) 585
BmgT120I GGNCC 1 cut(s) 491
BmiI GGNNCC 1 cut(s) 492
BmrFI CCNGG 1 cut(s) 585
BmrI ACTGGG 1 cut(s) 326
BmsI GCATC 1 cut(s) 370
BmuI ACTGGG 1 cut(s) 326
BpiI GAAGAC 1 cut(s) 27
BplI GAGNNNNNCTC 2 cut(s) 413, 445
BpmI CTGGAG 1 cut(s) 567
Bpu1102I GCTNAGC 1 cut(s) 384
BsaI GGTCTC 1 cut(s) 248
BsaXI ACNNNNNCTCC 4 cut(s) 565, 595, 628, 658
Bsc4I CCNNNNNNNGG 4 cut(s) 182, 334, 364, 633
Bse1I ACTGG 1 cut(s) 321
Bse21I CCTNAGG 1 cut(s) 260
BseBI CCWGG 1 cut(s) 585
BseGI GGATG 1 cut(s) 85
BseLI CCNNNNNNNGG 4 cut(s) 182, 334, 364, 633
BseMII CTCAG 1 cut(s) 398
BseNI ACTGG 1 cut(s) 321
BseXI GCAGC 3 cut(s) 214, 454, 533
BshFI GGCC 3 cut(s) 479, 493, 626
BsiSI CCGG 1 cut(s) 335
BslFI GGGAC 2 cut(s) 341, 408
BslI CCNNNNNNNGG 4 cut(s) 182, 334, 364, 633
BsmAI GTCTC 2 cut(s) 143, 248
BsmFI GGGAC 2 cut(s) 341, 408
BsmI GAATGC 2 cut(s) 125, 470
BsnI GGCC 3 cut(s) 479, 493, 626
Bso31I GGTCTC 1 cut(s) 248
Bsp143I GATC 1 cut(s) 663
Bsp1720I GCTNAGC 1 cut(s) 384
BspACI CCGC 1 cut(s) 608
BspANI GGCC 3 cut(s) 479, 493, 626
BspCNI CTCAG 1 cut(s) 397
BspLI GGNNCC 1 cut(s) 492
BspMAI CTGCAG 1 cut(s) 232
BspTNI GGTCTC 1 cut(s) 248
BsrI ACTGG 1 cut(s) 321
BssMI GATC 1 cut(s) 663
Bst2UI CCWGG 1 cut(s) 585
BstDEI CTNAG 2 cut(s) 260, 384
BstF5I GGATG 1 cut(s) 85
BstKTI GATC 1 cut(s) 666
BstMAI GTCTC 2 cut(s) 143, 248
BstMBI GATC 1 cut(s) 663
BstMWI GCNNNNNNNGC 3 cut(s) 71, 476, 607
BstNI CCWGG 1 cut(s) 585
BstSCI CCNGG 1 cut(s) 583
BstSFI CTRYAG 1 cut(s) 228
BstV1I GCAGC 3 cut(s) 214, 454, 533
BstV2I GAAGAC 1 cut(s) 27
Bsu36I CCTNAGG 1 cut(s) 260
BsuRI GGCC 3 cut(s) 479, 493, 626
BtsCI GGATG 1 cut(s) 85
Cfr13I GGNCC 1 cut(s) 491
CviAII CATG 4 cut(s) 377, 463, 475, 633
DdeI CTNAG 2 cut(s) 260, 384
DpnI GATC 1 cut(s) 665
DpnII GATC 1 cut(s) 663
DrdI GACNNNNNNGTC 1 cut(s) 544
DseDI GACNNNNNNGTC 1 cut(s) 544
EaeI YGGCCR 1 cut(s) 624
Eco31I GGTCTC 1 cut(s) 248
Eco57I CTGAAG 1 cut(s) 453
Eco81I CCTNAGG 1 cut(s) 260
EcoO109I RGGNCCY 1 cut(s) 491
EcoRII CCWGG 1 cut(s) 583
FaeI CATG 4 cut(s) 380, 466, 478, 636
FaqI GGGAC 2 cut(s) 341, 408
FatI CATG 4 cut(s) 376, 462, 474, 632
Fnu4HI GCNGC 3 cut(s) 228, 468, 522
FokI GGATG 1 cut(s) 92
Fsp4HI GCNGC 3 cut(s) 228, 468, 522
FspBI CTAG 3 cut(s) 47, 312, 495
GluI GCNGC 3 cut(s) 228, 468, 522
GsuI CTGGAG 1 cut(s) 567
HaeIII GGCC 3 cut(s) 479, 493, 626
HapII CCGG 1 cut(s) 335
Hin1II CATG 4 cut(s) 380, 466, 478, 636
HinfI GANTC 3 cut(s) 426, 510, 553
HpaII CCGG 1 cut(s) 335
Hpy166II GTNNAC 1 cut(s) 595
Hpy188I TCNGA 3 cut(s) 79, 433, 663
Hpy8I GTNNAC 1 cut(s) 595
HpyAV CCTTC 3 cut(s) 186, 289, 428
HpyCH4V TGCA 6 cut(s) 123, 230, 302, 470, 521, 559
HpyF10VI GCNNNNNNNGC 3 cut(s) 71, 476, 607
HpyF3I CTNAG 2 cut(s) 260, 384
Hsp92II CATG 4 cut(s) 380, 466, 478, 636
Kzo9I GATC 1 cut(s) 663
LmnI GCTCC 1 cut(s) 330
Lsp1109I GCAGC 3 cut(s) 214, 454, 533
LweI GCATC 1 cut(s) 370
MaeI CTAG 3 cut(s) 47, 312, 495
MalI GATC 1 cut(s) 665
MboI GATC 1 cut(s) 663
MboII GAAGA 3 cut(s) 32, 103, 171
MluCI AATT 1 cut(s) 157
MnlI CCTC 6 cut(s) 55, 109, 200, 215, 282, 372
MspA1I CMGCKG 1 cut(s) 610
MspI CCGG 1 cut(s) 335
MspR9I CCNGG 1 cut(s) 585
Mva1269I GAATGC 2 cut(s) 125, 470
MvaI CCWGG 1 cut(s) 585
MwoI GCNNNNNNNGC 3 cut(s) 71, 476, 607
NdeII GATC 1 cut(s) 663
NlaIII CATG 4 cut(s) 380, 466, 478, 636
NlaIV GGNNCC 1 cut(s) 492
PctI GAATGC 2 cut(s) 125, 470
PfeI GAWTC 3 cut(s) 426, 510, 553
PflMI CCANNNNNTGG 1 cut(s) 633
PkrI GCNGC 3 cut(s) 229, 469, 523
Psp6I CCWGG 1 cut(s) 583
PspGI CCWGG 1 cut(s) 583
PspN4I GGNNCC 1 cut(s) 492
PspPI GGNCC 1 cut(s) 491
PstI CTGCAG 1 cut(s) 232
SatI GCNGC 3 cut(s) 228, 468, 522
Sau3AI GATC 1 cut(s) 663
Sau96I GGNCC 1 cut(s) 491
ScrFI CCNGG 1 cut(s) 585
SetI ASST 8 cut(s) 226, 266, 300, 327, 351, 364, 390, 589
SfaNI GCATC 1 cut(s) 370
SfcI CTRYAG 1 cut(s) 228
Sse9I AATT 1 cut(s) 157
SsiI CCGC 1 cut(s) 608
SspMI CTAG 3 cut(s) 47, 312, 495
StyD4I CCNGG 1 cut(s) 583
TaqI TCGA 1 cut(s) 98
TasI AATT 1 cut(s) 157
TfiI GAWTC 3 cut(s) 426, 510, 553
TseI GCWGC 3 cut(s) 227, 467, 521
TspDTI ATGAA 3 cut(s) 263, 359, 463
Van91I CCANNNNNTGG 1 cut(s) 633
XspI CTAG 3 cut(s) 47, 312, 495
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.