Rh4DG361000

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Reverse (-)
58288855 .. 58290576
1722 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG361000.1

Sequence Viewer

Length: 807 bp
ATGCCAAAACGGCATTTTGGAACCAATAAAAAGAGCCATTTAACTTGGAAGCCTATCACAAACATACTGAAGATGGGCGTAGTAATCCTTGTTTCAAGCTTTTTGTGTGTGTTTCTTCTCCCAGGCCTCATCAAGATCGTTTACAAGCTATGGTGGACTCCGACTCGCATACAGAAGCGGATGGCTTCTCAGGGAATCAGAGGCCCTTCTTACAGACTCATCTATGGGAACACCAAGGAAATCTCCAGCATGCACAAGGAAGCCATGAGCAGGCCATTGGGTTTATCCCATGACATACTTTCTTATGTTCAACCTCATATTCACTCATGGACCAATCTATATGGGAAGACTTACCTTCAGTGGCATGGTTCGCGAGCTCAGTTGGTTATTCAAGAACCTGAGTTGTGCAAAGAGATACTGAACAACAAAGACGGGGCTTATCCGAAAATAGGGTCTGAAGACTTTGTGAAGAAGCTATTAGGCGATGGCCTTGTTACTATAGTAGAATCTGAAAAATGGGCAAAGTTGCGAAGGATTGCCACCCATGCCTTCCATGGGGAGAGCTTAAAAACTATGATTCCAGATATGATAGCTAGTGCTGAGACAATGGTAGAAAGGTGGAAAAATCACGAAGGAAAAGAGATTGAGGTGTTTGAGGAATTTAGGTTGTTCACTTCAGAAGTGATTGCTAAGACAGCCTTTGGAAGTAGCTATGTAGAAGGAGAGCTCATTTTTCAGATGTTGATGAAGTTGGCCTTCTTATTATTCAAAAATGCGCTCACAGTCAAGGTTCCTGGCATAAGGTAA

Protein Analysis

268

Amino Acids

30.75

Weight (kDa)

9.66

Isoelectric Point (pI)

41.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 110 - 241 1.4e-15 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 373
AciI CCGC 1 cut(s) 178
AcsI RAATTY 1 cut(s) 659
AcuI CTGAAG 4 cut(s) 89, 341, 477, 660
AfiI CCNNNNNNNGG 3 cut(s) 270, 449, 555
AgsI TTSAA 4 cut(s) 96, 311, 392, 769
AjnI CCWGG 2 cut(s) 121, 793
AluBI AGCT 8 cut(s) 99, 148, 377, 475, 564, 593, 711, 727
AluI AGCT 8 cut(s) 99, 148, 377, 475, 564, 593, 711, 727
Alw21I GWGCWC 2 cut(s) 379, 729
Alw26I GTCTC 1 cut(s) 596
AoxI GGCC 5 cut(s) 124, 202, 272, 487, 753
ApoI RAATTY 1 cut(s) 659
ArsI GACNNNNNNTTYG 2 cut(s) 437, 469
AspLEI GCGC 1 cut(s) 778
AspS9I GGNCC 2 cut(s) 203, 330
AvaII GGWCC 1 cut(s) 330
BanII GRGCYC 2 cut(s) 379, 729
BbsI GAAGAC 2 cut(s) 353, 465
Bbv12I GWGCWC 2 cut(s) 379, 729
BccI CCATC 3 cut(s) 67, 175, 479
BceAI ACGGC 1 cut(s) 26
BciT130I CCWGG 2 cut(s) 123, 795
BcoDI GTCTC 1 cut(s) 596
BfaI CTAG 1 cut(s) 594
BfmI CTRYAG 1 cut(s) 498
BglI GCCNNNNNGGC 1 cut(s) 10
Bme1390I CCNGG 2 cut(s) 123, 795
Bme18I GGWCC 1 cut(s) 330
BmgT120I GGNCC 2 cut(s) 203, 330
BmiI GGNNCC 2 cut(s) 22, 792
BmrFI CCNGG 2 cut(s) 123, 795
BpiI GAAGAC 2 cut(s) 353, 465
BpmI CTGGAG 1 cut(s) 229
BsaJI CCNNGG 3 cut(s) 121, 234, 553
Bsc4I CCNNNNNNNGG 3 cut(s) 270, 449, 555
BseBI CCWGG 2 cut(s) 123, 795
BseDI CCNNGG 3 cut(s) 121, 234, 553
BseGI GGATG 1 cut(s) 186
BseLI CCNNNNNNNGG 3 cut(s) 270, 449, 555
BseMII CTCAG 4 cut(s) 203, 390, 392, 591
Bsh1236I CGCG 1 cut(s) 373
BshFI GGCC 5 cut(s) 126, 204, 274, 489, 755
BsiHKAI GWGCWC 2 cut(s) 379, 729
BslI CCNNNNNNNGG 3 cut(s) 270, 449, 555
BsmAI GTCTC 1 cut(s) 596
BsnI GGCC 5 cut(s) 126, 204, 274, 489, 755
Bsp1286I GDGCHC 2 cut(s) 379, 729
Bsp143I GATC 1 cut(s) 135
Bsp19I CCATGG 1 cut(s) 553
Bsp68I TCGCGA 1 cut(s) 373
BspACI CCGC 1 cut(s) 178
BspANI GGCC 5 cut(s) 126, 204, 274, 489, 755
BspCNI CTCAG 4 cut(s) 202, 391, 391, 592
BspFNI CGCG 1 cut(s) 373
BspLI GGNNCC 2 cut(s) 22, 792
BssECI CCNNGG 3 cut(s) 121, 234, 553
BssMI GATC 1 cut(s) 135
BssT1I CCWWGG 2 cut(s) 234, 553
Bst2UI CCWGG 2 cut(s) 123, 795
Bst4CI ACNGT 1 cut(s) 784
BstC8I GCNNGC 3 cut(s) 251, 272, 375
BstDEI CTNAG 5 cut(s) 189, 378, 399, 600, 690
BstDSI CCRYGG 1 cut(s) 553
BstF5I GGATG 1 cut(s) 186
BstFNI CGCG 1 cut(s) 373
BstHHI GCGC 1 cut(s) 778
BstKTI GATC 1 cut(s) 138
BstMAI GTCTC 1 cut(s) 596
BstMBI GATC 1 cut(s) 135
BstMWI GCNNNNNNNGC 4 cut(s) 10, 370, 545, 695
BstNI CCWGG 2 cut(s) 123, 795
BstNSI RCATGY 1 cut(s) 253
BstSCI CCNGG 2 cut(s) 121, 793
BstSFI CTRYAG 1 cut(s) 498
BstUI CGCG 1 cut(s) 373
BstV2I GAAGAC 2 cut(s) 353, 465
BsuRI GGCC 5 cut(s) 126, 204, 274, 489, 755
BtgI CCRYGG 1 cut(s) 553
BtgZI GCGATG 1 cut(s) 498
BtsCI GGATG 1 cut(s) 186
BtsIMutI CAGTG 1 cut(s) 365
BtuMI TCGCGA 1 cut(s) 373
Cac8I GCNNGC 3 cut(s) 251, 272, 375
CfoI GCGC 1 cut(s) 778
Cfr13I GGNCC 2 cut(s) 203, 330
CviAII CATG 7 cut(s) 250, 265, 290, 327, 365, 545, 554
DdeI CTNAG 5 cut(s) 189, 378, 399, 600, 690
DpnI GATC 1 cut(s) 137
DpnII GATC 1 cut(s) 135
Ecl136II GAGCTC 2 cut(s) 377, 727
Eco130I CCWWGG 2 cut(s) 234, 553
Eco147I AGGCCT 1 cut(s) 126
Eco24I GRGCYC 2 cut(s) 379, 729
Eco47I GGWCC 1 cut(s) 330
Eco53kI GAGCTC 2 cut(s) 377, 727
Eco57I CTGAAG 4 cut(s) 89, 341, 477, 660
EcoICRI GAGCTC 2 cut(s) 377, 727
EcoO109I RGGNCCY 1 cut(s) 203
EcoRII CCWGG 2 cut(s) 121, 793
EcoT14I CCWWGG 2 cut(s) 234, 553
EcoT38I GRGCYC 2 cut(s) 379, 729
ErhI CCWWGG 2 cut(s) 234, 553
FaeI CATG 7 cut(s) 253, 268, 293, 330, 368, 548, 557
FalI AAGNNNNNCTT 4 cut(s) 683, 715, 740, 772
FatI CATG 7 cut(s) 249, 264, 289, 326, 364, 544, 553
FokI GGATG 1 cut(s) 193
FriOI GRGCYC 2 cut(s) 379, 729
FspBI CTAG 1 cut(s) 594
GlaI GCGC 1 cut(s) 777
GsuI CTGGAG 1 cut(s) 229
HaeIII GGCC 5 cut(s) 126, 204, 274, 489, 755
HhaI GCGC 1 cut(s) 778
Hin1II CATG 7 cut(s) 253, 268, 293, 330, 368, 548, 557
Hin6I GCGC 1 cut(s) 776
HinP1I GCGC 1 cut(s) 776
HindIII AAGCTT 1 cut(s) 97
HinfI GANTC 6 cut(s) 157, 163, 195, 216, 506, 577
Hpy166II GTNNAC 3 cut(s) 142, 156, 672
Hpy188I TCNGA 7 cut(s) 162, 200, 444, 457, 511, 679, 738
Hpy188III TCNNGA 5 cut(s) 133, 372, 392, 581, 629
Hpy8I GTNNAC 3 cut(s) 142, 156, 672
HpyAV CCTTC 7 cut(s) 216, 365, 525, 559, 626, 713, 766
HpyCH4III ACNGT 1 cut(s) 784
HpyCH4V TGCA 2 cut(s) 253, 408
HpyF10VI GCNNNNNNNGC 4 cut(s) 10, 370, 545, 695
HpyF3I CTNAG 5 cut(s) 189, 378, 399, 600, 690
Hsp92II CATG 7 cut(s) 253, 268, 293, 330, 368, 548, 557
HspAI GCGC 1 cut(s) 776
Kzo9I GATC 1 cut(s) 135
LpnPI CCDG 8 cut(s) 108, 135, 176, 256, 259, 411, 594, 780
MaeI CTAG 1 cut(s) 594
MaeIII GTNAC 1 cut(s) 493
MalI GATC 1 cut(s) 137
MboI GATC 1 cut(s) 135
MboII GAAGA 5 cut(s) 82, 107, 358, 470, 481
MhlI GDGCHC 2 cut(s) 379, 729
MluCI AATT 1 cut(s) 659
MlyI GAGTC 3 cut(s) 151, 157, 210
MmeI TCCRAC 1 cut(s) 185
MnlI CCTC 5 cut(s) 137, 194, 324, 640, 649
MseI TTAA 2 cut(s) 41, 566
MspR9I CCNGG 2 cut(s) 123, 795
MvaI CCWGG 2 cut(s) 123, 795
MvnI CGCG 1 cut(s) 373
MwoI GCNNNNNNNGC 4 cut(s) 10, 370, 545, 695
NcoI CCATGG 1 cut(s) 553
NdeII GATC 1 cut(s) 135
NlaIII CATG 7 cut(s) 253, 268, 293, 330, 368, 548, 557
NlaIV GGNNCC 2 cut(s) 22, 792
NruI TCGCGA 1 cut(s) 373
NspI RCATGY 1 cut(s) 253
PaeI GCATGC 1 cut(s) 253
PceI AGGCCT 1 cut(s) 126
PfeI GAWTC 3 cut(s) 195, 506, 577
PleI GAGTC 3 cut(s) 151, 157, 210
PpsI GAGTC 3 cut(s) 151, 157, 210
Psp124BI GAGCTC 2 cut(s) 379, 729
Psp6I CCWGG 2 cut(s) 121, 793
PspGI CCWGG 2 cut(s) 121, 793
PspN4I GGNNCC 2 cut(s) 22, 792
PspPI GGNCC 2 cut(s) 203, 330
RruI TCGCGA 1 cut(s) 373
SacI GAGCTC 2 cut(s) 379, 729
SaqAI TTAA 2 cut(s) 41, 566
Sau3AI GATC 1 cut(s) 135
Sau96I GGNCC 2 cut(s) 203, 330
SchI GAGTC 3 cut(s) 151, 157, 210
ScrFI CCNGG 2 cut(s) 123, 795
SduI GDGCHC 2 cut(s) 379, 729
SfcI CTRYAG 1 cut(s) 498
SinI GGWCC 1 cut(s) 330
SphI GCATGC 1 cut(s) 253
Sse9I AATT 1 cut(s) 659
SseBI AGGCCT 1 cut(s) 126
SsiI CCGC 1 cut(s) 178
SspMI CTAG 1 cut(s) 594
SstI GAGCTC 2 cut(s) 379, 729
StuI AGGCCT 1 cut(s) 126
StyD4I CCNGG 2 cut(s) 121, 793
StyI CCWWGG 2 cut(s) 234, 553
TaaI ACNGT 1 cut(s) 784
TasI AATT 1 cut(s) 659
TfiI GAWTC 3 cut(s) 195, 506, 577
Tru1I TTAA 2 cut(s) 41, 566
Tru9I TTAA 2 cut(s) 41, 566
TscAI CASTG 1 cut(s) 365
TspDTI ATGAA 1 cut(s) 761
TspRI CASTG 1 cut(s) 365
VpaK11BI GGWCC 1 cut(s) 330
XapI RAATTY 1 cut(s) 659
XceI RCATGY 1 cut(s) 253
XcmI CCANNNNNNNNNTGG 1 cut(s) 551
XspI CTAG 1 cut(s) 594
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.