Rh4DG360700

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Reverse (-)
58199467 .. 58202379
2913 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG360700.1

Sequence Viewer

Length: 450 bp
ATGGAAGCTGAGGAAGAGAAGAAAGACCAAGCTTTGTTTCCTCTCTCTCAGAAACTGATGGCTTCACAGGGAATCAGAGGACCTCCCTACAGACTTATCGATGGAAACGCCAAGGAAGTCTCCAACATGTGCAAGGAAGCCATTAGCAGGCCCTTGGATTTGTCGCACAACATATTACCAGTAGTTCTACCTCATGTTCATGCATGGACCAAAATCTATGGGAAGAATTATCTTCAGTGGCATGGTACTCGGGCTGAGTTGGTGGTGACGGAAGCCGAGTTGTGCAAGGAGATACTCAGTAATAAAGATGGATTCTATCTGAAACCCAAGTTCAGAGCTTATGCAAAGAAGATATTTGGGAATGGCCTTCCACAATTAGAAGGTGAAAAATGGGCGAAATCGCGAAAGCTGGCCAACCATGCCTTCCATGGACAGAACTTAAAAGAATAA

Protein Analysis

149

Amino Acids

16.98

Weight (kDa)

9.3

Isoelectric Point (pI)

34.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 403
AcoI YGGCCR 1 cut(s) 411
AcuI CTGAAG 1 cut(s) 218
AfaI GTAC 1 cut(s) 247
AfiI CCNNNNNNNGG 1 cut(s) 147
AflIII ACRYGT 1 cut(s) 126
AjuI GAANNNNNNNTTGG 4 cut(s) 21, 53, 407, 439
AluBI AGCT 4 cut(s) 8, 32, 338, 409
AluI AGCT 4 cut(s) 8, 32, 338, 409
Alw26I GTCTC 1 cut(s) 124
AlwNI CAGNNNCTG 1 cut(s) 55
Ama87I CYCGRG 1 cut(s) 249
AoxI GGCC 3 cut(s) 149, 364, 411
AspS9I GGNCC 3 cut(s) 80, 150, 207
AsuHPI GGTGA 2 cut(s) 277, 395
AvaI CYCGRG 1 cut(s) 249
AvaII GGWCC 2 cut(s) 80, 207
BalI TGGCCA 1 cut(s) 413
BbvCI CCTCAGC 1 cut(s) 9
BccI CCATC 3 cut(s) 52, 95, 302
BcgI CGANNNNNNTGC 2 cut(s) 230, 264
BcoDI GTCTC 1 cut(s) 124
BfmI CTRYAG 1 cut(s) 88
Bme18I GGWCC 2 cut(s) 80, 207
BmeT110I CYCGRG 1 cut(s) 249
BmgT120I GGNCC 3 cut(s) 80, 150, 207
Bpu10I CCTNAGC 1 cut(s) 9
Bsa29I ATCGAT 1 cut(s) 99
BsaJI CCNNGG 3 cut(s) 111, 153, 427
Bsc4I CCNNNNNNNGG 1 cut(s) 147
Bse1I ACTGG 1 cut(s) 179
BseCI ATCGAT 1 cut(s) 99
BseDI CCNNGG 3 cut(s) 111, 153, 427
BseLI CCNNNNNNNGG 1 cut(s) 147
BseMII CTCAG 3 cut(s) 62, 246, 310
BseNI ACTGG 1 cut(s) 179
Bsh1236I CGCG 1 cut(s) 403
BshFI GGCC 3 cut(s) 151, 366, 413
BshVI ATCGAT 1 cut(s) 99
BsiHKCI CYCGRG 1 cut(s) 249
BslI CCNNNNNNNGG 1 cut(s) 147
BsmAI GTCTC 1 cut(s) 124
BsnI GGCC 3 cut(s) 151, 366, 413
BsoBI CYCGRG 1 cut(s) 249
Bsp19I CCATGG 1 cut(s) 427
Bsp68I TCGCGA 1 cut(s) 403
BspANI GGCC 3 cut(s) 151, 366, 413
BspCNI CTCAG 3 cut(s) 61, 247, 309
BspDI ATCGAT 1 cut(s) 99
BspFNI CGCG 1 cut(s) 403
BsrI ACTGG 1 cut(s) 179
BssECI CCNNGG 3 cut(s) 111, 153, 427
BssT1I CCWWGG 3 cut(s) 111, 153, 427
Bst6I CTCTTC 1 cut(s) 9
BstC8I GCNNGC 2 cut(s) 149, 411
BstDEI CTNAG 4 cut(s) 9, 48, 255, 296
BstDSI CCRYGG 1 cut(s) 427
BstFNI CGCG 1 cut(s) 403
BstMAI GTCTC 1 cut(s) 124
BstMWI GCNNNNNNNGC 1 cut(s) 419
BstNSI RCATGY 1 cut(s) 130
BstSFI CTRYAG 1 cut(s) 88
BstUI CGCG 1 cut(s) 403
Bsu15I ATCGAT 1 cut(s) 99
BsuRI GGCC 3 cut(s) 151, 366, 413
BsuTUI ATCGAT 1 cut(s) 99
BtgI CCRYGG 1 cut(s) 427
BtsIMutI CAGTG 1 cut(s) 242
BtuMI TCGCGA 1 cut(s) 403
Cac8I GCNNGC 2 cut(s) 149, 411
CaiI CAGNNNCTG 1 cut(s) 55
Cfr13I GGNCC 3 cut(s) 80, 150, 207
ClaI ATCGAT 1 cut(s) 99
Csp6I GTAC 1 cut(s) 246
CviAII CATG 7 cut(s) 127, 194, 200, 204, 242, 419, 428
CviQI GTAC 1 cut(s) 246
DdeI CTNAG 4 cut(s) 9, 48, 255, 296
EaeI YGGCCR 1 cut(s) 411
Eam1104I CTCTTC 1 cut(s) 9
EarI CTCTTC 1 cut(s) 9
Eco130I CCWWGG 3 cut(s) 111, 153, 427
Eco47I GGWCC 2 cut(s) 80, 207
Eco57I CTGAAG 1 cut(s) 218
Eco88I CYCGRG 1 cut(s) 249
EcoO109I RGGNCCY 2 cut(s) 80, 150
EcoT14I CCWWGG 3 cut(s) 111, 153, 427
EcoT22I ATGCAT 1 cut(s) 205
ErhI CCWWGG 3 cut(s) 111, 153, 427
FaeI CATG 7 cut(s) 130, 197, 203, 207, 245, 422, 431
FatI CATG 7 cut(s) 126, 193, 199, 203, 241, 418, 427
HaeIII GGCC 3 cut(s) 151, 366, 413
Hin1II CATG 7 cut(s) 130, 197, 203, 207, 245, 422, 431
HindIII AAGCTT 1 cut(s) 30
HinfI GANTC 2 cut(s) 72, 312
HphI GGTGA 2 cut(s) 277, 395
Hpy188I TCNGA 4 cut(s) 51, 77, 321, 335
Hpy188III TCNNGA 1 cut(s) 402
HpyAV CCTTC 3 cut(s) 374, 377, 433
HpyCH4V TGCA 4 cut(s) 132, 203, 285, 344
HpyF10VI GCNNNNNNNGC 1 cut(s) 419
HpyF3I CTNAG 4 cut(s) 9, 48, 255, 296
Hsp92II CATG 7 cut(s) 130, 197, 203, 207, 245, 422, 431
LpnPI CCDG 4 cut(s) 53, 133, 192, 395
MaeIII GTNAC 1 cut(s) 265
MboII GAAGA 5 cut(s) 26, 31, 224, 235, 361
MlsI TGGCCA 1 cut(s) 413
MluCI AATT 2 cut(s) 226, 374
MluNI TGGCCA 1 cut(s) 413
MmeI TCCRAC 1 cut(s) 147
MnlI CCTC 5 cut(s) 4, 51, 71, 93, 201
Mox20I TGGCCA 1 cut(s) 413
Mph1103I ATGCAT 1 cut(s) 205
MscI TGGCCA 1 cut(s) 413
MseI TTAA 1 cut(s) 440
MslI CAYNNNNRTG 1 cut(s) 198
Msp20I TGGCCA 1 cut(s) 413
MvnI CGCG 1 cut(s) 403
MwoI GCNNNNNNNGC 1 cut(s) 419
NcoI CCATGG 1 cut(s) 427
NlaIII CATG 7 cut(s) 130, 197, 203, 207, 245, 422, 431
NmeAIII GCCGAG 1 cut(s) 301
NmuCI GTSAC 1 cut(s) 265
NruI TCGCGA 1 cut(s) 403
NsiI ATGCAT 1 cut(s) 205
NspI RCATGY 1 cut(s) 130
PciI ACATGT 1 cut(s) 126
PfeI GAWTC 2 cut(s) 72, 312
PpuMI RGGWCCY 1 cut(s) 80
PscI ACATGT 1 cut(s) 126
Psp5II RGGWCCY 1 cut(s) 80
PspPI GGNCC 3 cut(s) 80, 150, 207
PspPPI RGGWCCY 1 cut(s) 80
PstNI CAGNNNCTG 1 cut(s) 55
RruI TCGCGA 1 cut(s) 403
RsaI GTAC 1 cut(s) 247
RsaNI GTAC 1 cut(s) 246
RseI CAYNNNNRTG 1 cut(s) 198
SaqAI TTAA 1 cut(s) 440
Sau96I GGNCC 3 cut(s) 80, 150, 207
SetI ASST 7 cut(s) 10, 34, 85, 193, 340, 385, 411
SfcI CTRYAG 1 cut(s) 88
SinI GGWCC 2 cut(s) 80, 207
SmiMI CAYNNNNRTG 1 cut(s) 198
Sse9I AATT 2 cut(s) 226, 374
StyI CCWWGG 3 cut(s) 111, 153, 427
TaqI TCGA 1 cut(s) 99
TasI AATT 2 cut(s) 226, 374
TfiI GAWTC 2 cut(s) 72, 312
Tru1I TTAA 1 cut(s) 440
Tru9I TTAA 1 cut(s) 440
TscAI CASTG 1 cut(s) 242
TseFI GTSAC 1 cut(s) 265
Tsp45I GTSAC 1 cut(s) 265
TspDTI ATGAA 1 cut(s) 188
TspGWI ACGGA 1 cut(s) 284
TspRI CASTG 1 cut(s) 242
VpaK11BI GGWCC 2 cut(s) 80, 207
XceI RCATGY 1 cut(s) 130
XcmI CCANNNNNNNNNTGG 1 cut(s) 425
Zsp2I ATGCAT 1 cut(s) 205
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.