Sec61beta family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Nicastrin | PF05450 | 224 - 328 | 5.8e-06 | Nicastrin large lobe |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 858 |
| AatII | GACGTC | 1 cut(s) | 120 |
| AccB1I | GGYRCC | 1 cut(s) | 1393 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 34 |
| AccI | GTMKAC | 3 cut(s) | 45, 114, 120 |
| AccII | CGCG | 2 cut(s) | 59, 104 |
| AccIII | TCCGGA | 1 cut(s) | 885 |
| AciI | CCGC | 2 cut(s) | 102, 124 |
| AclWI | GGATC | 6 cut(s) | 124, 169, 1374, 1409, 1581, 1594 |
| AcoI | YGGCCR | 2 cut(s) | 19, 1545 |
| AcuI | CTGAAG | 2 cut(s) | 1085, 1591 |
| AcyI | GRCGYC | 3 cut(s) | 99, 117, 1394 |
| AfaI | GTAC | 2 cut(s) | 821, 1581 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 34, 308 |
| AflIII | ACRYGT | 1 cut(s) | 141 |
| AjnI | CCWGG | 3 cut(s) | 16, 211, 1517 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 287, 319, 392, 424, 1427, 1459 |
| AluBI | AGCT | 8 cut(s) | 91, 152, 427, 562, 710, 891, 1103, 1691 |
| AluI | AGCT | 8 cut(s) | 91, 152, 427, 562, 710, 891, 1103, 1691 |
| Alw21I | GWGCWC | 3 cut(s) | 93, 154, 1605 |
| Alw26I | GTCTC | 3 cut(s) | 371, 645, 982 |
| AlwI | GGATC | 6 cut(s) | 124, 169, 1374, 1409, 1581, 1594 |
| Ama87I | CYCGRG | 2 cut(s) | 1095, 1386 |
| Aor13HI | TCCGGA | 1 cut(s) | 885 |
| AoxI | GGCC | 3 cut(s) | 4, 19, 1545 |
| ApeKI | GCWGC | 5 cut(s) | 298, 529, 707, 1142, 1474 |
| AspLEI | GCGC | 3 cut(s) | 27, 61, 1396 |
| AspS9I | GGNCC | 2 cut(s) | 4, 851 |
| AsuC2I | CCSGG | 1 cut(s) | 526 |
| AsuHPI | GGTGA | 4 cut(s) | 176, 259, 591, 1477 |
| AsuNHI | GCTAGC | 1 cut(s) | 1523 |
| AvaI | CYCGRG | 2 cut(s) | 1095, 1386 |
| AvaII | GGWCC | 1 cut(s) | 851 |
| BalI | TGGCCA | 2 cut(s) | 21, 1547 |
| BamHI | GGATCC | 1 cut(s) | 1586 |
| BanI | GGYRCC | 1 cut(s) | 1393 |
| BanII | GRGCYC | 2 cut(s) | 93, 154 |
| Bbv12I | GWGCWC | 3 cut(s) | 93, 154, 1605 |
| BbvI | GCAGC | 5 cut(s) | 310, 541, 719, 1129, 1486 |
| BccI | CCATC | 5 cut(s) | 377, 618, 641, 1199, 1484 |
| BceAI | ACGGC | 2 cut(s) | 375, 1142 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1367, 1401 |
| BciT130I | CCWGG | 3 cut(s) | 18, 213, 1519 |
| BciVI | GTATCC | 1 cut(s) | 548 |
| BcnI | CCSGG | 1 cut(s) | 526 |
| BcoDI | GTCTC | 3 cut(s) | 371, 645, 982 |
| BfaI | CTAG | 4 cut(s) | 774, 1524, 1577, 1629 |
| BfoI | RGCGCY | 2 cut(s) | 28, 1397 |
| BfuI | GTATCC | 1 cut(s) | 548 |
| BisI | GCNGC | 6 cut(s) | 102, 299, 530, 708, 1143, 1475 |
| BlsI | GCNGC | 6 cut(s) | 103, 300, 531, 709, 1144, 1476 |
| BmcAI | AGTACT | 1 cut(s) | 1581 |
| Bme1390I | CCNGG | 4 cut(s) | 18, 213, 526, 1519 |
| Bme18I | GGWCC | 1 cut(s) | 851 |
| BmeT110I | CYCGRG | 2 cut(s) | 1095, 1386 |
| BmgT120I | GGNCC | 2 cut(s) | 4, 851 |
| BmiI | GGNNCC | 5 cut(s) | 196, 217, 884, 1395, 1588 |
| BmrFI | CCNGG | 4 cut(s) | 18, 213, 526, 1519 |
| BmrI | ACTGGG | 1 cut(s) | 1592 |
| BmsI | GCATC | 3 cut(s) | 508, 605, 695 |
| BmtI | GCTAGC | 1 cut(s) | 1527 |
| BmuI | ACTGGG | 1 cut(s) | 1592 |
| BoxI | GACNNNNGTC | 1 cut(s) | 110 |
| BpmI | CTGGAG | 4 cut(s) | 56, 570, 867, 972 |
| BpuMI | CCSGG | 1 cut(s) | 526 |
| BsaAI | YACGTR | 2 cut(s) | 254, 1676 |
| BsaHI | GRCGYC | 3 cut(s) | 99, 117, 1394 |
| BsaJI | CCNNGG | 2 cut(s) | 7, 1518 |
| BsaWI | WCCGGW | 1 cut(s) | 885 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 179, 209, 378, 408 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 34, 308 |
| Bse118I | RCCGGY | 1 cut(s) | 191 |
| Bse1I | ACTGG | 4 cut(s) | 553, 1195, 1548, 1587 |
| Bse3DI | GCAATG | 1 cut(s) | 745 |
| BseAI | TCCGGA | 1 cut(s) | 885 |
| BseBI | CCWGG | 3 cut(s) | 18, 213, 1519 |
| BseDI | CCNNGG | 2 cut(s) | 7, 1518 |
| BseGI | GGATG | 3 cut(s) | 243, 397, 629 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 34, 308 |
| BseMI | GCAATG | 1 cut(s) | 745 |
| BseMII | CTCAG | 3 cut(s) | 167, 1121, 1251 |
| BseNI | ACTGG | 4 cut(s) | 553, 1195, 1548, 1587 |
| BseXI | GCAGC | 5 cut(s) | 310, 541, 719, 1129, 1486 |
| BsgI | GTGCAG | 1 cut(s) | 1493 |
| Bsh1236I | CGCG | 2 cut(s) | 59, 104 |
| BshFI | GGCC | 3 cut(s) | 6, 21, 1547 |
| BshNI | GGYRCC | 1 cut(s) | 1393 |
| BsiHKAI | GWGCWC | 3 cut(s) | 93, 154, 1605 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1095, 1386 |
| BsiSI | CCGG | 3 cut(s) | 192, 525, 886 |
| BslFI | GGGAC | 2 cut(s) | 327, 968 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 34, 308 |
| BsmAI | GTCTC | 3 cut(s) | 371, 645, 982 |
| BsmFI | GGGAC | 2 cut(s) | 327, 968 |
| BsmI | GAATGC | 1 cut(s) | 1000 |
| BsnI | GGCC | 3 cut(s) | 6, 21, 1547 |
| BsoBI | CYCGRG | 2 cut(s) | 1095, 1386 |
| Bsp1286I | GDGCHC | 3 cut(s) | 93, 154, 1605 |
| Bsp13I | TCCGGA | 1 cut(s) | 885 |
| Bsp143I | GATC | 9 cut(s) | 54, 129, 161, 220, 1366, 1414, 1450, 1586, 1642 |
| Bsp19I | CCATGG | 1 cut(s) | 7 |
| BspACI | CCGC | 2 cut(s) | 102, 124 |
| BspANI | GGCC | 3 cut(s) | 6, 21, 1547 |
| BspCNI | CTCAG | 3 cut(s) | 166, 1122, 1252 |
| BspEI | TCCGGA | 1 cut(s) | 885 |
| BspFNI | CGCG | 2 cut(s) | 59, 104 |
| BspLI | GGNNCC | 5 cut(s) | 196, 217, 884, 1395, 1588 |
| BspOI | GCTAGC | 1 cut(s) | 1527 |
| BspPI | GGATC | 6 cut(s) | 124, 169, 1374, 1409, 1581, 1594 |
| BspQI | GCTCTTC | 2 cut(s) | 68, 1610 |
| BspT107I | GGYRCC | 1 cut(s) | 1393 |
| BsrDI | GCAATG | 1 cut(s) | 745 |
| BsrFI | RCCGGY | 1 cut(s) | 191 |
| BsrI | ACTGG | 4 cut(s) | 553, 1195, 1548, 1587 |
| BssAI | RCCGGY | 1 cut(s) | 191 |
| BssECI | CCNNGG | 2 cut(s) | 7, 1518 |
| BssMI | GATC | 9 cut(s) | 54, 129, 161, 220, 1366, 1414, 1450, 1586, 1642 |
| BssNI | GRCGYC | 3 cut(s) | 99, 117, 1394 |
| BssT1I | CCWWGG | 1 cut(s) | 7 |
| Bst2UI | CCWGG | 3 cut(s) | 18, 213, 1519 |
| Bst4CI | ACNGT | 5 cut(s) | 109, 235, 1057, 1119, 1179 |
| Bst6I | CTCTTC | 3 cut(s) | 68, 1035, 1610 |
| BstACI | GRCGYC | 3 cut(s) | 99, 117, 1394 |
| BstBAI | YACGTR | 2 cut(s) | 254, 1676 |
| BstC8I | GCNNGC | 8 cut(s) | 23, 82, 193, 314, 534, 905, 1211, 1525 |
| BstDEI | CTNAG | 5 cut(s) | 153, 585, 981, 1130, 1260 |
| BstDSI | CCRYGG | 1 cut(s) | 7 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 306 |
| BstF5I | GGATG | 3 cut(s) | 243, 397, 629 |
| BstFNI | CGCG | 2 cut(s) | 59, 104 |
| BstH2I | RGCGCY | 2 cut(s) | 28, 1397 |
| BstHHI | GCGC | 3 cut(s) | 27, 61, 1396 |
| BstKTI | GATC | 9 cut(s) | 57, 132, 164, 223, 1369, 1417, 1453, 1589, 1645 |
| BstMAI | GTCTC | 3 cut(s) | 371, 645, 982 |
| BstMBI | GATC | 9 cut(s) | 54, 129, 161, 220, 1366, 1414, 1450, 1586, 1642 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 22, 31, 298, 322, 497, 683 |
| BstNI | CCWGG | 3 cut(s) | 18, 213, 1519 |
| BstNSI | RCATGY | 1 cut(s) | 145 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 110 |
| BstSCI | CCNGG | 4 cut(s) | 16, 211, 524, 1517 |
| BstUI | CGCG | 2 cut(s) | 59, 104 |
| BstV1I | GCAGC | 5 cut(s) | 310, 541, 719, 1129, 1486 |
| BstX2I | RGATCY | 3 cut(s) | 161, 1366, 1586 |
| BstYI | RGATCY | 3 cut(s) | 161, 1366, 1586 |
| BsuI | GTATCC | 1 cut(s) | 548 |
| BsuRI | GGCC | 3 cut(s) | 6, 21, 1547 |
| BtgI | CCRYGG | 1 cut(s) | 7 |
| BtsCI | GGATG | 3 cut(s) | 243, 397, 629 |
| BtsIMutI | CAGTG | 3 cut(s) | 729, 1188, 1555 |
| Cac8I | GCNNGC | 8 cut(s) | 23, 82, 193, 314, 534, 905, 1211, 1525 |
| CfoI | GCGC | 3 cut(s) | 27, 61, 1396 |
| Cfr10I | RCCGGY | 1 cut(s) | 191 |
| Cfr13I | GGNCC | 2 cut(s) | 4, 851 |
| CseI | GACGC | 2 cut(s) | 73, 107 |
| Csp6I | GTAC | 2 cut(s) | 820, 1580 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 727, 762 |
| CviAII | CATG | 6 cut(s) | 8, 142, 951, 974, 1112, 1478 |
| CviQI | GTAC | 2 cut(s) | 820, 1580 |
| DdeI | CTNAG | 5 cut(s) | 153, 585, 981, 1130, 1260 |
| DinI | GGCGCC | 1 cut(s) | 1395 |
| DpnI | GATC | 9 cut(s) | 56, 131, 163, 222, 1368, 1416, 1452, 1588, 1644 |
| DpnII | GATC | 9 cut(s) | 54, 129, 161, 220, 1366, 1414, 1450, 1586, 1642 |
| EaeI | YGGCCR | 2 cut(s) | 19, 1545 |
| Eam1104I | CTCTTC | 3 cut(s) | 68, 1035, 1610 |
| EarI | CTCTTC | 3 cut(s) | 68, 1035, 1610 |
| Ecl136II | GAGCTC | 2 cut(s) | 91, 152 |
| Eco130I | CCWWGG | 1 cut(s) | 7 |
| Eco24I | GRGCYC | 2 cut(s) | 93, 154 |
| Eco47I | GGWCC | 1 cut(s) | 851 |
| Eco53kI | GAGCTC | 2 cut(s) | 91, 152 |
| Eco57I | CTGAAG | 2 cut(s) | 1085, 1591 |
| Eco88I | CYCGRG | 2 cut(s) | 1095, 1386 |
| EcoICRI | GAGCTC | 2 cut(s) | 91, 152 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 306 |
| EcoO109I | RGGNCCY | 1 cut(s) | 851 |
| EcoRII | CCWGG | 3 cut(s) | 16, 211, 1517 |
| EcoT14I | CCWWGG | 1 cut(s) | 7 |
| EcoT38I | GRGCYC | 2 cut(s) | 93, 154 |
| EgeI | GGCGCC | 1 cut(s) | 1395 |
| EheI | GGCGCC | 1 cut(s) | 1395 |
| ErhI | CCWWGG | 1 cut(s) | 7 |
| FaeI | CATG | 6 cut(s) | 11, 145, 954, 977, 1115, 1481 |
| FaqI | GGGAC | 2 cut(s) | 327, 968 |
| FatI | CATG | 6 cut(s) | 7, 141, 950, 973, 1111, 1477 |
| FauNDI | CATATG | 1 cut(s) | 691 |
| FblI | GTMKAC | 3 cut(s) | 45, 114, 120 |
| Fnu4HI | GCNGC | 6 cut(s) | 102, 299, 530, 708, 1143, 1475 |
| FokI | GGATG | 3 cut(s) | 230, 404, 636 |
| FriOI | GRGCYC | 2 cut(s) | 93, 154 |
| Fsp4HI | GCNGC | 6 cut(s) | 102, 299, 530, 708, 1143, 1475 |
| FspBI | CTAG | 4 cut(s) | 774, 1524, 1577, 1629 |
| GlaI | GCGC | 3 cut(s) | 26, 60, 1395 |
| GluI | GCNGC | 6 cut(s) | 102, 299, 530, 708, 1143, 1475 |
| GsuI | CTGGAG | 4 cut(s) | 56, 570, 867, 972 |
| HaeII | RGCGCY | 2 cut(s) | 28, 1397 |
| HaeIII | GGCC | 3 cut(s) | 6, 21, 1547 |
| HapII | CCGG | 3 cut(s) | 192, 525, 886 |
| HgaI | GACGC | 2 cut(s) | 73, 107 |
| HhaI | GCGC | 3 cut(s) | 27, 61, 1396 |
| Hin1I | GRCGYC | 3 cut(s) | 99, 117, 1394 |
| Hin1II | CATG | 6 cut(s) | 11, 145, 954, 977, 1115, 1481 |
| Hin6I | GCGC | 3 cut(s) | 25, 59, 1394 |
| HinP1I | GCGC | 3 cut(s) | 25, 59, 1394 |
| HincII | GTYRAC | 3 cut(s) | 115, 840, 919 |
| HindII | GTYRAC | 3 cut(s) | 115, 840, 919 |
| HindIII | AAGCTT | 1 cut(s) | 560 |
| HinfI | GANTC | 3 cut(s) | 38, 181, 1511 |
| HpaII | CCGG | 3 cut(s) | 192, 525, 886 |
| HphI | GGTGA | 4 cut(s) | 176, 259, 591, 1477 |
| Hpy166II | GTNNAC | 7 cut(s) | 46, 115, 121, 257, 840, 919, 1500 |
| Hpy188I | TCNGA | 8 cut(s) | 161, 180, 220, 278, 1030, 1065, 1156, 1596 |
| Hpy8I | GTNNAC | 7 cut(s) | 46, 115, 121, 257, 840, 919, 1500 |
| Hpy99I | CGWCG | 6 cut(s) | 80, 89, 101, 116, 119, 1665 |
| HpyAV | CCTTC | 5 cut(s) | 280, 723, 810, 1013, 1353 |
| HpyCH4III | ACNGT | 5 cut(s) | 109, 235, 1057, 1119, 1179 |
| HpyCH4IV | ACGT | 4 cut(s) | 117, 253, 592, 1675 |
| HpyCH4V | TGCA | 5 cut(s) | 202, 596, 1232, 1316, 1474 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 22, 31, 298, 322, 497, 683 |
| HpyF3I | CTNAG | 5 cut(s) | 153, 585, 981, 1130, 1260 |
| HpySE526I | ACGT | 4 cut(s) | 117, 253, 592, 1675 |
| Hsp92I | GRCGYC | 3 cut(s) | 99, 117, 1394 |
| Hsp92II | CATG | 6 cut(s) | 11, 145, 954, 977, 1115, 1481 |
| HspAI | GCGC | 3 cut(s) | 25, 59, 1394 |
| KasI | GGCGCC | 1 cut(s) | 1393 |
| Kpn2I | TCCGGA | 1 cut(s) | 885 |
| KroI | GCCGGC | 1 cut(s) | 191 |
| KroNI | GCCGGC | 1 cut(s) | 193 |
| Kzo9I | GATC | 9 cut(s) | 54, 129, 161, 220, 1366, 1414, 1450, 1586, 1642 |
| LguI | GCTCTTC | 2 cut(s) | 68, 1610 |
| LmnI | GCTCC | 7 cut(s) | 149, 200, 221, 715, 888, 888, 1174 |
| Lsp1109I | GCAGC | 5 cut(s) | 310, 541, 719, 1129, 1486 |
| LweI | GCATC | 3 cut(s) | 508, 605, 695 |
| MaeI | CTAG | 4 cut(s) | 774, 1524, 1577, 1629 |
| MaeII | ACGT | 4 cut(s) | 117, 253, 592, 1675 |
| MaeIII | GTNAC | 3 cut(s) | 1135, 1286, 1552 |
| MalI | GATC | 9 cut(s) | 56, 131, 163, 222, 1368, 1416, 1452, 1588, 1644 |
| MboI | GATC | 9 cut(s) | 54, 129, 161, 220, 1366, 1414, 1450, 1586, 1642 |
| MboII | GAAGA | 7 cut(s) | 55, 58, 412, 485, 1052, 1460, 1597 |
| MflI | RGATCY | 3 cut(s) | 161, 1366, 1586 |
| MhlI | GDGCHC | 3 cut(s) | 93, 154, 1605 |
| MlsI | TGGCCA | 2 cut(s) | 21, 1547 |
| MluCI | AATT | 5 cut(s) | 768, 823, 962, 1214, 1442 |
| MluNI | TGGCCA | 2 cut(s) | 21, 1547 |
| Mly113I | GGCGCC | 1 cut(s) | 1394 |
| MlyI | GAGTC | 1 cut(s) | 47 |
| MmeI | TCCRAC | 2 cut(s) | 692, 1344 |
| Mox20I | TGGCCA | 2 cut(s) | 21, 1547 |
| MroI | TCCGGA | 1 cut(s) | 885 |
| MroNI | GCCGGC | 1 cut(s) | 191 |
| MscI | TGGCCA | 2 cut(s) | 21, 1547 |
| MseI | TTAA | 4 cut(s) | 1221, 1239, 1338, 1530 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1281, 1458 |
| Msp20I | TGGCCA | 2 cut(s) | 21, 1547 |
| MspI | CCGG | 3 cut(s) | 192, 525, 886 |
| MspR9I | CCNGG | 4 cut(s) | 18, 213, 526, 1519 |
| Mva1269I | GAATGC | 1 cut(s) | 1000 |
| MvaI | CCWGG | 3 cut(s) | 18, 213, 1519 |
| MvnI | CGCG | 2 cut(s) | 59, 104 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 22, 31, 298, 322, 497, 683 |
| NaeI | GCCGGC | 1 cut(s) | 193 |
| NarI | GGCGCC | 1 cut(s) | 1394 |
| NciI | CCSGG | 1 cut(s) | 526 |
| NcoI | CCATGG | 1 cut(s) | 7 |
| NdeI | CATATG | 1 cut(s) | 691 |
| NdeII | GATC | 9 cut(s) | 54, 129, 161, 220, 1366, 1414, 1450, 1586, 1642 |
| NgoMIV | GCCGGC | 1 cut(s) | 191 |
| NheI | GCTAGC | 1 cut(s) | 1523 |
| NlaIII | CATG | 6 cut(s) | 11, 145, 954, 977, 1115, 1481 |
| NlaIV | GGNNCC | 5 cut(s) | 196, 217, 884, 1395, 1588 |
| NmuCI | GTSAC | 2 cut(s) | 1286, 1552 |
| NspI | RCATGY | 1 cut(s) | 145 |
| PaeR7I | CTCGAG | 2 cut(s) | 1095, 1386 |
| PciI | ACATGT | 1 cut(s) | 141 |
| PciSI | GCTCTTC | 2 cut(s) | 68, 1610 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 81, 84, 93 |
| PctI | GAATGC | 1 cut(s) | 1000 |
| PdiI | GCCGGC | 1 cut(s) | 193 |
| PfeI | GAWTC | 2 cut(s) | 181, 1511 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 34 |
| PkrI | GCNGC | 6 cut(s) | 103, 300, 531, 709, 1144, 1476 |
| PleI | GAGTC | 1 cut(s) | 46 |
| PluTI | GGCGCC | 1 cut(s) | 1397 |
| PpsI | GAGTC | 1 cut(s) | 46 |
| Ppu21I | YACGTR | 2 cut(s) | 254, 1676 |
| PpuMI | RGGWCCY | 1 cut(s) | 851 |
| PscI | ACATGT | 1 cut(s) | 141 |
| PshAI | GACNNNNGTC | 1 cut(s) | 110 |
| PsiI | TTATAA | 1 cut(s) | 858 |
| Psp124BI | GAGCTC | 2 cut(s) | 93, 154 |
| Psp5II | RGGWCCY | 1 cut(s) | 851 |
| Psp6I | CCWGG | 3 cut(s) | 16, 211, 1517 |
| PspGI | CCWGG | 3 cut(s) | 16, 211, 1517 |
| PspN4I | GGNNCC | 5 cut(s) | 196, 217, 884, 1395, 1588 |
| PspPI | GGNCC | 2 cut(s) | 4, 851 |
| PspPPI | RGGWCCY | 1 cut(s) | 851 |
| PspXI | VCTCGAGB | 2 cut(s) | 1095, 1386 |
| PsuI | RGATCY | 3 cut(s) | 161, 1366, 1586 |
| RsaI | GTAC | 2 cut(s) | 821, 1581 |
| RsaNI | GTAC | 2 cut(s) | 820, 1580 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1281, 1458 |
| SacI | GAGCTC | 2 cut(s) | 93, 154 |
| SalI | GTCGAC | 1 cut(s) | 113 |
| SapI | GCTCTTC | 2 cut(s) | 68, 1610 |
| SaqAI | TTAA | 4 cut(s) | 1221, 1239, 1338, 1530 |
| SatI | GCNGC | 6 cut(s) | 102, 299, 530, 708, 1143, 1475 |
| Sau3AI | GATC | 9 cut(s) | 54, 129, 161, 220, 1366, 1414, 1450, 1586, 1642 |
| Sau96I | GGNCC | 2 cut(s) | 4, 851 |
| ScaI | AGTACT | 1 cut(s) | 1581 |
| SchI | GAGTC | 1 cut(s) | 47 |
| ScrFI | CCNGG | 4 cut(s) | 18, 213, 526, 1519 |
| SduI | GDGCHC | 3 cut(s) | 93, 154, 1605 |
| SfaNI | GCATC | 3 cut(s) | 508, 605, 695 |
| SfoI | GGCGCC | 1 cut(s) | 1395 |
| Sfr274I | CTCGAG | 2 cut(s) | 1095, 1386 |
| SgrDI | CGTCGACG | 1 cut(s) | 113 |
| SinI | GGWCC | 1 cut(s) | 851 |
| SlaI | CTCGAG | 2 cut(s) | 1095, 1386 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1281, 1458 |
| SmlI | CTYRAG | 2 cut(s) | 1095, 1386 |
| SmoI | CTYRAG | 2 cut(s) | 1095, 1386 |
| Sse9I | AATT | 5 cut(s) | 768, 823, 962, 1214, 1442 |
| SsiI | CCGC | 2 cut(s) | 102, 124 |
| SspDI | GGCGCC | 1 cut(s) | 1393 |
| SspI | AATATT | 3 cut(s) | 616, 1014, 1084 |
| SspMI | CTAG | 4 cut(s) | 774, 1524, 1577, 1629 |
| SstI | GAGCTC | 2 cut(s) | 93, 154 |
| StyD4I | CCNGG | 4 cut(s) | 16, 211, 524, 1517 |
| StyI | CCWWGG | 1 cut(s) | 7 |
| TaaI | ACNGT | 5 cut(s) | 109, 235, 1057, 1119, 1179 |
| TaiI | ACGT | 4 cut(s) | 120, 256, 595, 1678 |
| TaqI | TCGA | 6 cut(s) | 87, 114, 352, 1096, 1387, 1660 |
| TasI | AATT | 5 cut(s) | 768, 823, 962, 1214, 1442 |
| TatI | WGTACW | 1 cut(s) | 1579 |
| TauI | GCSGC | 1 cut(s) | 104 |
| TfiI | GAWTC | 2 cut(s) | 181, 1511 |
| Tru1I | TTAA | 4 cut(s) | 1221, 1239, 1338, 1530 |
| Tru9I | TTAA | 4 cut(s) | 1221, 1239, 1338, 1530 |
| TscAI | CASTG | 3 cut(s) | 729, 1195, 1555 |
| TseFI | GTSAC | 2 cut(s) | 1286, 1552 |
| TseI | GCWGC | 5 cut(s) | 298, 529, 707, 1142, 1474 |
| Tsp45I | GTSAC | 2 cut(s) | 1286, 1552 |
| TspDTI | ATGAA | 5 cut(s) | 58, 962, 1128, 1239, 1335 |
| TspGWI | ACGGA | 2 cut(s) | 31, 40 |
| TspRI | CASTG | 3 cut(s) | 729, 1195, 1555 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 34 |
| VpaK11BI | GGWCC | 1 cut(s) | 851 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 306 |
| XceI | RCATGY | 1 cut(s) | 145 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 14 |
| XhoI | CTCGAG | 2 cut(s) | 1095, 1386 |
| XmiI | GTMKAC | 3 cut(s) | 45, 114, 120 |
| XspI | CTAG | 4 cut(s) | 774, 1524, 1577, 1629 |
| ZraI | GACGTC | 1 cut(s) | 118 |
| ZrmI | AGTACT | 1 cut(s) | 1581 |