Rroxscaffold_5G00378840

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Reverse (-)
59360805 .. 59364266
3462 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00378840.1

Sequence Viewer

Length: 1359 bp
ATGGCTTTGCAGGGAATCAAAGGTCCTCCTTACACACTCATCCATGGAAACACCAAACAAGTCGCCAATATGTACAAGGAAGCCATGAGCAAGCCTTTAGATTTGTCGCACGACATAGTACCTGTAGTTCTACCTCATGTTCATGCATGGAGAAGTATCTATGGGAAGAATTTTCTTCAGTGGCAAGGTACTCGAGCTCAGTTGGTCGTGACGGAACCTGAATTGTGCAAGGAGATATTCAATAACAAAGATGGAGCTTATCCAAAACCCACGTCCCTAGTTCCAAAAATACTACTTGGGAATGGCCTTCCGTTATTAGAAGGTGAGAAATGGGCAAAATCGCGGAAGCTGGCTAACCATGCCTTCCATGGAGAGAGCTTAAAAAGTATGATTCCACAAATGATAGCTAGTGCTGAGACAATGCTAGGAAGATGGAAAAACCATGTAGGCCAAGAGATTGAGGTGTTTCAAGAATTTAGATTGTTGACCGCAGAAGTGATTTCTAGGACAGCATTTGGCAGCAGCTATTTGCAAGGACAGCACATATTTGAAATGTTAATGAAGTTAAGCTCCTTACTTGTCAACTTTGATCTTAAACTCAAGCTTCCAGGCATCAGCAAATTTTTTAAGACCAATGATGAGATTGAAGTAGAGAAGCTTCGGAAAGGAATCCGCAACTCCATTATGGAGATTGTTAAGGAAAGAGAAGAGAAGGCAATGAGTGGGGAAGAAGAGAGCTTTGGGAATGATATAGTTGATGAGTGCAAGTCGTTTTACTTTGCTGGACAAGAGACCGTCAATACTTTGCTTTCCTGGACTGTCTTTCTTCTGGCACTCCATAACGATTGGCAAGAGGAAGCGAGAAAGGAAGTCCTGCAATTATTCGGGAAAGAGACTCCAAATCCTAATGACCTTTCCAAACTAAAAACAATGAGTATGATCATCAATGAATCCTTGAGGCTATATTCTCCCATTCTTTACGTTACAAGGAGTATTGAAAGGACAGTTAGACTTGGAAAGCTCATTGTTCCTGCTGATGTTGAGTTAATCATCCCATTTCTAGCAATACACCATGACCTTCAATTCTGGGGACAAGACGCACATCTTTTCAAACCAGACCGATTCTCAGAAGGAGTTGCTAAAGCAACTAACAACAACATGGCGACATTCTTACCATTTGGAATGGGACCTAGGAATTGTGTAGGCCTTCACTTTGGCACCACTGAAGCCAAGATTGCTCTTTCAATGATCCTACAGCGCTACTTCTTTACGCTGTCTCCGGGTTATGTTCACTCGCCCTTGAGGCAGCTGGCACTACGCCCACGGTATGGAGTTCAAGTAATGCTACACTCGCTGTGA

Protein Analysis

452

Amino Acids

51.38

Weight (kDa)

8.84

Isoelectric Point (pI)

39.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 51 - 430 1.4e-64 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1217
AccB7I CCANNNNNTGG 1 cut(s) 1328
AccII CGCG 1 cut(s) 343
AciI CCGC 3 cut(s) 343, 489, 673
AclWI GGATC 1 cut(s) 1243
AcsI RAATTY 3 cut(s) 169, 473, 620
AcuI CTGAAG 2 cut(s) 161, 1245
AfaI GTAC 3 cut(s) 74, 120, 190
AfeI AGCGCT 1 cut(s) 1259
AfiI CCNNNNNNNGG 1 cut(s) 1328
AgsI TTSAA 9 cut(s) 241, 470, 551, 647, 998, 1082, 1111, 1245, 1337
AjiI CACGTC 1 cut(s) 273
AjnI CCWGG 2 cut(s) 607, 812
AjuI GAANNNNNNNTTGG 2 cut(s) 723, 755
Alw21I GWGCWC 1 cut(s) 199
Alw26I GTCTC 4 cut(s) 410, 785, 887, 1281
AlwI GGATC 1 cut(s) 1243
Ama87I CYCGRG 1 cut(s) 192
Aor51HI AGCGCT 1 cut(s) 1259
AoxI GGCC 3 cut(s) 304, 448, 1204
ApeKI GCWGC 3 cut(s) 519, 522, 1306
ApoI RAATTY 3 cut(s) 169, 473, 620
ArsI GACNNNNNNTTYG 2 cut(s) 257, 289
AspA2I CCTAGG 1 cut(s) 1190
AspLEI GCGC 1 cut(s) 1260
AspS9I GGNCC 2 cut(s) 23, 1187
AsuC2I CCSGG 1 cut(s) 1281
AsuHPI GGTGA 1 cut(s) 335
AvaI CYCGRG 1 cut(s) 192
AvaII GGWCC 2 cut(s) 23, 1187
AvrII CCTAGG 1 cut(s) 1190
BanI GGYRCC 1 cut(s) 1217
BanII GRGCYC 1 cut(s) 199
BarI GAAGNNNNNNTAC 2 cut(s) 642, 674
Bbv12I GWGCWC 1 cut(s) 199
BbvI GCAGC 3 cut(s) 531, 534, 1318
BccI CCATC 2 cut(s) 245, 426
BcgI CGANNNNNNTGC 2 cut(s) 173, 207
BciT130I CCWGG 2 cut(s) 609, 814
BclI TGATCA 1 cut(s) 939
BcnI CCSGG 1 cut(s) 1281
BcoDI GTCTC 4 cut(s) 410, 785, 887, 1281
BfaI CTAG 6 cut(s) 278, 408, 425, 504, 1061, 1191
BfmI CTRYAG 2 cut(s) 123, 1253
BfoI RGCGCY 1 cut(s) 1261
BglI GCCNNNNNGGC 1 cut(s) 1303
BisI GCNGC 3 cut(s) 520, 523, 1307
BlnI CCTAGG 1 cut(s) 1190
BlsI GCNGC 3 cut(s) 521, 524, 1308
Bme1390I CCNGG 3 cut(s) 609, 814, 1281
Bme18I GGWCC 2 cut(s) 23, 1187
BmeT110I CYCGRG 1 cut(s) 192
BmgBI CACGTC 1 cut(s) 273
BmgT120I GGNCC 2 cut(s) 23, 1187
BmiI GGNNCC 3 cut(s) 216, 1188, 1219
BmrFI CCNGG 3 cut(s) 609, 814, 1281
BmsI GCATC 1 cut(s) 621
BpuEI CTTGAG 3 cut(s) 584, 976, 1321
BpuMI CCSGG 1 cut(s) 1281
BsaI GGTCTC 1 cut(s) 785
BsaJI CCNNGG 4 cut(s) 43, 367, 1190, 1322
BsaXI ACNNNNNCTCC 4 cut(s) 1261, 1291, 1323, 1353
Bsc4I CCNNNNNNNGG 1 cut(s) 1328
Bse3DI GCAATG 1 cut(s) 723
BseBI CCWGG 2 cut(s) 609, 814
BseDI CCNNGG 4 cut(s) 43, 367, 1190, 1322
BseGI GGATG 2 cut(s) 39, 1050
BseLI CCNNNNNNNGG 1 cut(s) 1328
BseMI GCAATG 1 cut(s) 723
BseMII CTCAG 3 cut(s) 212, 405, 1140
BseXI GCAGC 3 cut(s) 531, 534, 1318
Bsh1236I CGCG 1 cut(s) 343
BshFI GGCC 3 cut(s) 306, 450, 1206
BshNI GGYRCC 1 cut(s) 1217
BsiHKAI GWGCWC 1 cut(s) 199
BsiHKCI CYCGRG 1 cut(s) 192
BsiSI CCGG 1 cut(s) 1280
BslFI GGGAC 3 cut(s) 259, 1104, 1200
BslI CCNNNNNNNGG 1 cut(s) 1328
BsmAI GTCTC 4 cut(s) 410, 785, 887, 1281
BsmFI GGGAC 3 cut(s) 259, 1104, 1200
BsnI GGCC 3 cut(s) 306, 450, 1206
Bso31I GGTCTC 1 cut(s) 785
BsoBI CYCGRG 1 cut(s) 192
Bsp1286I GDGCHC 1 cut(s) 199
Bsp1407I TGTACA 1 cut(s) 72
Bsp143I GATC 3 cut(s) 589, 939, 1248
Bsp19I CCATGG 2 cut(s) 43, 367
BspACI CCGC 3 cut(s) 343, 489, 673
BspANI GGCC 3 cut(s) 306, 450, 1206
BspCNI CTCAG 3 cut(s) 211, 406, 1139
BspFNI CGCG 1 cut(s) 343
BspLI GGNNCC 3 cut(s) 216, 1188, 1219
BspPI GGATC 1 cut(s) 1243
BspT107I GGYRCC 1 cut(s) 1217
BspTNI GGTCTC 1 cut(s) 785
BsrDI GCAATG 1 cut(s) 723
BsrGI TGTACA 1 cut(s) 72
BssECI CCNNGG 4 cut(s) 43, 367, 1190, 1322
BssMI GATC 3 cut(s) 589, 939, 1248
BssT1I CCWWGG 3 cut(s) 43, 367, 1190
Bst2UI CCWGG 2 cut(s) 609, 814
Bst4CI ACNGT 4 cut(s) 796, 820, 1006, 1326
Bst6I CTCTTC 2 cut(s) 702, 726
BstAUI TGTACA 1 cut(s) 72
BstC8I GCNNGC 3 cut(s) 92, 351, 1311
BstDEI CTNAG 3 cut(s) 198, 414, 1126
BstDSI CCRYGG 3 cut(s) 43, 367, 1322
BstF5I GGATG 2 cut(s) 39, 1050
BstFNI CGCG 1 cut(s) 343
BstH2I RGCGCY 1 cut(s) 1261
BstHHI GCGC 1 cut(s) 1260
BstKTI GATC 3 cut(s) 592, 942, 1251
BstMAI GTCTC 4 cut(s) 410, 785, 887, 1281
BstMBI GATC 3 cut(s) 589, 939, 1248
BstMWI GCNNNNNNNGC 5 cut(s) 359, 538, 1235, 1303, 1351
BstNI CCWGG 2 cut(s) 609, 814
BstSCI CCNGG 3 cut(s) 607, 812, 1279
BstSFI CTRYAG 2 cut(s) 123, 1253
BstUI CGCG 1 cut(s) 343
BstV1I GCAGC 3 cut(s) 531, 534, 1318
BsuRI GGCC 3 cut(s) 306, 450, 1206
BtgI CCRYGG 3 cut(s) 43, 367, 1322
BtrI CACGTC 1 cut(s) 273
BtsCI GGATG 2 cut(s) 39, 1050
BtsIMutI CAGTG 2 cut(s) 185, 1221
Cac8I GCNNGC 3 cut(s) 92, 351, 1311
CfoI GCGC 1 cut(s) 1260
Cfr13I GGNCC 2 cut(s) 23, 1187
CseI GACGC 1 cut(s) 1106
Csp6I GTAC 3 cut(s) 73, 119, 189
CviQI GTAC 3 cut(s) 73, 119, 189
DdeI CTNAG 3 cut(s) 198, 414, 1126
DpnI GATC 3 cut(s) 591, 941, 1250
DpnII GATC 3 cut(s) 589, 939, 1248
Eam1104I CTCTTC 2 cut(s) 702, 726
EarI CTCTTC 2 cut(s) 702, 726
Ecl136II GAGCTC 1 cut(s) 197
Eco130I CCWWGG 3 cut(s) 43, 367, 1190
Eco147I AGGCCT 1 cut(s) 1206
Eco24I GRGCYC 1 cut(s) 199
Eco31I GGTCTC 1 cut(s) 785
Eco47I GGWCC 2 cut(s) 23, 1187
Eco47III AGCGCT 1 cut(s) 1259
Eco53kI GAGCTC 1 cut(s) 197
Eco57I CTGAAG 2 cut(s) 161, 1245
Eco88I CYCGRG 1 cut(s) 192
EcoICRI GAGCTC 1 cut(s) 197
EcoO109I RGGNCCY 2 cut(s) 23, 1187
EcoRII CCWGG 2 cut(s) 607, 812
EcoT14I CCWWGG 3 cut(s) 43, 367, 1190
EcoT22I ATGCAT 1 cut(s) 148
EcoT38I GRGCYC 1 cut(s) 199
ErhI CCWWGG 3 cut(s) 43, 367, 1190
FaqI GGGAC 3 cut(s) 259, 1104, 1200
FbaI TGATCA 1 cut(s) 939
Fnu4HI GCNGC 3 cut(s) 520, 523, 1307
FokI GGATG 2 cut(s) 26, 1037
FriOI GRGCYC 1 cut(s) 199
Fsp4HI GCNGC 3 cut(s) 520, 523, 1307
FspBI CTAG 6 cut(s) 278, 408, 425, 504, 1061, 1191
GlaI GCGC 1 cut(s) 1259
GluI GCNGC 3 cut(s) 520, 523, 1307
HaeII RGCGCY 1 cut(s) 1261
HaeIII GGCC 3 cut(s) 306, 450, 1206
HapII CCGG 1 cut(s) 1280
HgaI GACGC 1 cut(s) 1106
HhaI GCGC 1 cut(s) 1260
Hin6I GCGC 1 cut(s) 1258
HinP1I GCGC 1 cut(s) 1258
HincII GTYRAC 2 cut(s) 486, 583
HindII GTYRAC 2 cut(s) 486, 583
HindIII AAGCTT 2 cut(s) 602, 656
HinfI GANTC 6 cut(s) 15, 391, 669, 895, 950, 1122
HpaII CCGG 1 cut(s) 1280
HphI GGTGA 1 cut(s) 335
Hpy166II GTNNAC 3 cut(s) 486, 583, 1291
Hpy188I TCNGA 2 cut(s) 663, 1129
Hpy188III TCNNGA 3 cut(s) 208, 470, 886
Hpy8I GTNNAC 3 cut(s) 486, 583, 1291
HpyAV CCTTC 7 cut(s) 314, 317, 373, 706, 1088, 1124, 1217
HpyCH4III ACNGT 4 cut(s) 796, 820, 1006, 1326
HpyCH4IV ACGT 2 cut(s) 272, 981
HpyCH4V TGCA 6 cut(s) 10, 146, 228, 532, 765, 877
HpyF10VI GCNNNNNNNGC 5 cut(s) 359, 538, 1235, 1303, 1351
HpyF3I CTNAG 3 cut(s) 198, 414, 1126
HpySE526I ACGT 2 cut(s) 272, 981
HspAI GCGC 1 cut(s) 1258
Ksp22I TGATCA 1 cut(s) 939
Kzo9I GATC 3 cut(s) 589, 939, 1248
LmnI GCTCC 2 cut(s) 254, 575
Lsp1109I GCAGC 3 cut(s) 531, 534, 1318
LweI GCATC 1 cut(s) 621
MaeI CTAG 6 cut(s) 278, 408, 425, 504, 1061, 1191
MaeII ACGT 2 cut(s) 272, 981
MaeIII GTNAC 2 cut(s) 208, 982
MalI GATC 3 cut(s) 591, 941, 1250
MboI GATC 3 cut(s) 589, 939, 1248
MboII GAAGA 7 cut(s) 167, 178, 441, 719, 740, 743, 818
MhlI GDGCHC 1 cut(s) 199
MluCI AATT 7 cut(s) 169, 221, 473, 620, 878, 1082, 1195
MlyI GAGTC 1 cut(s) 889
MnlI CCTC 6 cut(s) 36, 144, 454, 847, 951, 1296
Mph1103I ATGCAT 1 cut(s) 148
MseI TTAA 7 cut(s) 380, 557, 566, 594, 627, 696, 1046
MslI CAYNNNNRTG 1 cut(s) 141
MspA1I CMGCKG 1 cut(s) 1309
MspI CCGG 1 cut(s) 1280
MspR9I CCNGG 3 cut(s) 609, 814, 1281
MvaI CCWGG 2 cut(s) 609, 814
MvnI CGCG 1 cut(s) 343
MwoI GCNNNNNNNGC 5 cut(s) 359, 538, 1235, 1303, 1351
NciI CCSGG 1 cut(s) 1281
NcoI CCATGG 2 cut(s) 43, 367
NdeII GATC 3 cut(s) 589, 939, 1248
NlaIV GGNNCC 3 cut(s) 216, 1188, 1219
NmuCI GTSAC 1 cut(s) 208
NsiI ATGCAT 1 cut(s) 148
PaeR7I CTCGAG 1 cut(s) 192
PceI AGGCCT 1 cut(s) 1206
PfeI GAWTC 5 cut(s) 15, 391, 669, 950, 1122
PflMI CCANNNNNTGG 1 cut(s) 1328
PfoI TCCNGGA 1 cut(s) 812
PkrI GCNGC 3 cut(s) 521, 524, 1308
PleI GAGTC 1 cut(s) 889
PpsI GAGTC 1 cut(s) 889
PpuMI RGGWCCY 2 cut(s) 23, 1187
Psp124BI GAGCTC 1 cut(s) 199
Psp5II RGGWCCY 2 cut(s) 23, 1187
Psp6I CCWGG 2 cut(s) 607, 812
PspGI CCWGG 2 cut(s) 607, 812
PspN4I GGNNCC 3 cut(s) 216, 1188, 1219
PspPI GGNCC 2 cut(s) 23, 1187
PspPPI RGGWCCY 2 cut(s) 23, 1187
PspXI VCTCGAGB 1 cut(s) 192
PsrI GAACNNNNNNTAC 2 cut(s) 111, 143
PvuII CAGCTG 1 cut(s) 1309
RsaI GTAC 3 cut(s) 74, 120, 190
RsaNI GTAC 3 cut(s) 73, 119, 189
RseI CAYNNNNRTG 1 cut(s) 141
SacI GAGCTC 1 cut(s) 199
SaqAI TTAA 7 cut(s) 380, 557, 566, 594, 627, 696, 1046
SatI GCNGC 3 cut(s) 520, 523, 1307
Sau3AI GATC 3 cut(s) 589, 939, 1248
Sau96I GGNCC 2 cut(s) 23, 1187
SchI GAGTC 1 cut(s) 889
ScrFI CCNGG 3 cut(s) 609, 814, 1281
SduI GDGCHC 1 cut(s) 199
SfaNI GCATC 1 cut(s) 621
SfcI CTRYAG 2 cut(s) 123, 1253
Sfr274I CTCGAG 1 cut(s) 192
SinI GGWCC 2 cut(s) 23, 1187
SlaI CTCGAG 1 cut(s) 192
SmiMI CAYNNNNRTG 1 cut(s) 141
SmlI CTYRAG 4 cut(s) 192, 599, 955, 1300
SmoI CTYRAG 4 cut(s) 192, 599, 955, 1300
Sse9I AATT 7 cut(s) 169, 221, 473, 620, 878, 1082, 1195
SseBI AGGCCT 1 cut(s) 1206
SsiI CCGC 3 cut(s) 343, 489, 673
SspMI CTAG 6 cut(s) 278, 408, 425, 504, 1061, 1191
SstI GAGCTC 1 cut(s) 199
StuI AGGCCT 1 cut(s) 1206
StyD4I CCNGG 3 cut(s) 607, 812, 1279
StyI CCWWGG 3 cut(s) 43, 367, 1190
TaaI ACNGT 4 cut(s) 796, 820, 1006, 1326
TaiI ACGT 2 cut(s) 275, 984
TaqI TCGA 1 cut(s) 193
TaqII GACCGA 1 cut(s) 1134
TasI AATT 7 cut(s) 169, 221, 473, 620, 878, 1082, 1195
TatI WGTACW 1 cut(s) 72
TfiI GAWTC 5 cut(s) 15, 391, 669, 950, 1122
Tru1I TTAA 7 cut(s) 380, 557, 566, 594, 627, 696, 1046
Tru9I TTAA 7 cut(s) 380, 557, 566, 594, 627, 696, 1046
TscAI CASTG 2 cut(s) 185, 1228
TseFI GTSAC 1 cut(s) 208
TseI GCWGC 3 cut(s) 519, 522, 1306
Tsp45I GTSAC 1 cut(s) 208
TspDTI ATGAA 3 cut(s) 131, 575, 963
TspGWI ACGGA 2 cut(s) 227, 300
TspRI CASTG 2 cut(s) 185, 1228
Van91I CCANNNNNTGG 1 cut(s) 1328
VpaK11BI GGWCC 2 cut(s) 23, 1187
XapI RAATTY 3 cut(s) 169, 473, 620
XcmI CCANNNNNNNNNTGG 1 cut(s) 365
XhoI CTCGAG 1 cut(s) 192
XmaJI CCTAGG 1 cut(s) 1190
XspI CTAG 6 cut(s) 278, 408, 425, 504, 1061, 1191
Zsp2I ATGCAT 1 cut(s) 148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.