Rorug04G0302800

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000078
Physical Location & Seq
Forward (+)
47835220 .. 47837729
2510 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0302800.1

Sequence Viewer

Length: 1788 bp
ATGGAAAAGAAGGGAAAGGCAATAGTAGGTGGAATTTCAATCATCCTTGTGGTTGGAGCAGTAGTTGGTTGTGTAGCTGTTGTTTCACATAATCGCAGCAAAGGCAAGGATAGGCTTTCGACGAGTTCCAAGGCCGTCACTGCAATGTGTGAACCAACTGATTACAAGGATGAATGCATTGACAGCCTGGCTGACGCTGCCAAGAATCAAAGCGCCACCCCAAAAGAACTTATCCGAGCCGCCATTGATTACACAATCGATAAGGTGAAAGCGGCAATAGAGAAATCAGATGGCATTATCAAAGAAGCTAAAAATGTCAATTCCACTGGAAAAATGGCCTTCGAGGATTGCAATGACTTGTTGGAATCTTCAATCGAAAGTCTTCAATATTCGCTTTTGACACTCGTTGATACTGAAATGCAAAACATGAATAATAAAGAGGTTGATCTTAAGAACTGGTTCAGTGCTGCGATATCATTTCAGGAATCATGCATTGATGGGATTCCATACGAAGACCTTAAGAACCAAATGAACGAGGCGATGCTCCATGCTTCACAACTGACCAGCAACGCCTTAGCAATTGTGTCTTCCCTTGCTCCCATCCTAGGCAAATTCAATATCTCCATGAAAACTGACAGTAAAAGTTCAACCAGTCGTCGTCTCCTGGATGTAGAAATGGAAACGGATGAACATGGCACTTTTCCAGCATGGTTCCCAGCTGCAGATAGGAAGCTATTCGCACACCACAACAAGAACAATAACAATAGCAGCAACAACAACAACAACAACAACAACAACAACGACGACAACAACAACAACAACAACAACGGGAGAGTTACACCCAACGCAGTAGTGGCAAAAGATGGGAGTGGACAATACAAAACAATTGGTGAAGCTCTTGCTGCGTACCCAAAGGGATTCCAGGGAAGATATGTTATATATGTGAAAGCTGGGATTTACAATGAGTATGTTACTGTGGCCAAGAATCAGATCAATGTGTACATGTATGGAGATGGACCCCGGAGGACCATGATCACAGGCAGTAAAAGCTTTGCTGATGGCATCACCACCCAGGACACTGCCACATTCATCGTAATGGGGCATGGGTTCATTGGTAGAGCAATGGGATTTCAGAACACAGCCGGCCCCGAAAAGCATCAGGCAGTGGCACTCCGAGTCCAGTCGGAAATGTCAGCCTTCTTCAACTGCAGAATGGACGCCTACCAAGACACATTGTACGTGCAAGCATATCGCCAATTTTATCGCAACTGTGTCATATCCGGTACCGTTGACTTCATTTTTGGTGACTCATCAACAGTCATCCAGAATAGTTTACTCATTGTGAGGAAGCCTATGAACGGCCAAAAGAACATTGTGACTGCTCATGGAAGAAAAGATAAGCGGGAAACCACTGGTCTGGTTATCCAGAACTGCAGGATAGTCCCAGAACAGGCTTTGTTCCCAATGAGATTCCAGATTCAGTCATACTTGGGGCGGCCGTGGAAGATGTACTCGAGAACAGTTATCATGGAGTCCGAATTTGGGGACTTTATCCAACCAGCCGGTTGGCTAGAATGGCAAGGGACTTTTGGACTAGACACACTGTATTATGCAGAGTATGCAAATCGGGGTCCGGGTGCCGTAACCACAGGAAGGGTAAAATGGAAAGGATACCATGTGATTACGGACAGAAATGAGGCTCTTCAATTCACTCCGGGTAATTTTCTAACAGGAGACCAATGGTTGAAAGACACGGGTGTACCTTACTTCCTGGGTTTAAAAAACTAG

Protein Analysis

595

Amino Acids

66.02

Weight (kDa)

7.95

Isoelectric Point (pI)

27.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMEI PF04043 45 - 194 1.9e-29 Plant invertase/pectin methylesterase inhibitor
Pectinesterase PF01095 282 - 579 1e-135 Pectinesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1283
AccB1I GGYRCC 2 cut(s) 1283, 1637
AciI CCGC 4 cut(s) 240, 272, 1402, 1495
AcoI YGGCCR 3 cut(s) 978, 1360, 1496
AcsI RAATTY 3 cut(s) 33, 611, 1538
AcyI GRCGYC 1 cut(s) 1218
AfaI GTAC 6 cut(s) 908, 1001, 1238, 1285, 1511, 1761
AfiI CCNNNNNNNGG 5 cut(s) 605, 1358, 1450, 1542, 1653
AflII CTTAAG 2 cut(s) 449, 518
AflIII ACRYGT 1 cut(s) 1002
AgsI TTSAA 8 cut(s) 39, 372, 386, 616, 648, 1204, 1706, 1747
AjnI CCWGG 5 cut(s) 186, 663, 921, 1071, 1770
AluBI AGCT 7 cut(s) 77, 308, 719, 733, 896, 950, 1050
AluI AGCT 7 cut(s) 77, 308, 719, 733, 896, 950, 1050
Alw26I GTCTC 2 cut(s) 665, 1728
Ama87I CYCGRG 1 cut(s) 1513
AoxI GGCC 6 cut(s) 132, 336, 978, 1144, 1360, 1496
ApeKI GCWGC 6 cut(s) 96, 197, 467, 719, 768, 902
ApoI RAATTY 3 cut(s) 33, 611, 1538
ArsI GACNNNNNNTTYG 2 cut(s) 1283, 1315
Asp700I GAANNNNTTC 3 cut(s) 381, 458, 734
Asp718I GGTACC 1 cut(s) 1283
AspA2I CCTAGG 1 cut(s) 604
AspLEI GCGC 1 cut(s) 215
AspS9I GGNCC 4 cut(s) 1016, 1026, 1145, 1631
AsuC2I CCSGG 3 cut(s) 1021, 1635, 1716
AsuHPI GGTGA 4 cut(s) 277, 902, 1057, 1316
AvaI CYCGRG 1 cut(s) 1513
AvaII GGWCC 3 cut(s) 1016, 1026, 1631
AvrII CCTAGG 1 cut(s) 604
BaeI ACNNNNGTAYC 2 cut(s) 1743, 1776
BalI TGGCCA 1 cut(s) 980
BanI GGYRCC 2 cut(s) 1283, 1637
BbsI GAAGAC 3 cut(s) 374, 519, 579
BbvI GCAGC 6 cut(s) 108, 184, 454, 706, 780, 889
BccI CCATC 6 cut(s) 284, 491, 608, 857, 1007, 1052
BceAI ACGGC 4 cut(s) 119, 1375, 1483, 1625
BcgI CGANNNNNNTGC 2 cut(s) 1232, 1266
BciT130I CCWGG 5 cut(s) 188, 665, 923, 1073, 1772
BciVI GTATCC 1 cut(s) 1664
BclI TGATCA 1 cut(s) 1032
BcnI CCSGG 3 cut(s) 1021, 1635, 1716
BcoDI GTCTC 2 cut(s) 665, 1728
BfaI CTAG 4 cut(s) 605, 1571, 1595, 1786
BfmI CTRYAG 3 cut(s) 720, 1207, 1432
BfoI RGCGCY 1 cut(s) 216
BfrI CTTAAG 2 cut(s) 449, 518
BfuI GTATCC 1 cut(s) 1664
BisI GCNGC 9 cut(s) 97, 198, 240, 273, 468, 720, 769, 903, 1496
BlnI CCTAGG 1 cut(s) 604
BlsI GCNGC 9 cut(s) 98, 199, 241, 274, 469, 721, 770, 904, 1497
Bme1390I CCNGG 8 cut(s) 188, 665, 923, 1021, 1073, 1635, 1716, 1772
Bme18I GGWCC 3 cut(s) 1016, 1026, 1631
BmeT110I CYCGRG 1 cut(s) 1513
BmgT120I GGNCC 4 cut(s) 1016, 1026, 1145, 1631
BmiI GGNNCC 6 cut(s) 713, 1018, 1147, 1285, 1632, 1639
BmrFI CCNGG 8 cut(s) 188, 665, 923, 1021, 1073, 1635, 1716, 1772
BmsI GCATC 3 cut(s) 531, 1071, 1165
BpiI GAAGAC 3 cut(s) 374, 519, 579
Bpu10I CCTNAGC 1 cut(s) 574
BpuMI CCSGG 3 cut(s) 1021, 1635, 1716
Bsa29I ATCGAT 1 cut(s) 258
BsaAI YACGTR 1 cut(s) 1240
BsaHI GRCGYC 1 cut(s) 1218
BsaI GGTCTC 1 cut(s) 1728
BsaJI CCNNGG 7 cut(s) 129, 604, 922, 1019, 1071, 1499, 1771
BsaWI WCCGGW 1 cut(s) 1280
BsaXI ACNNNNNCTCC 2 cut(s) 48, 78
Bsc4I CCNNNNNNNGG 5 cut(s) 605, 1358, 1450, 1542, 1653
Bse118I RCCGGY 2 cut(s) 1142, 1562
Bse1I ACTGG 5 cut(s) 331, 461, 651, 1180, 1417
Bse3DI GCAATG 3 cut(s) 150, 358, 1128
BseBI CCWGG 5 cut(s) 188, 665, 923, 1073, 1772
BseCI ATCGAT 1 cut(s) 258
BseDI CCNNGG 7 cut(s) 129, 604, 922, 1019, 1071, 1499, 1771
BseGI GGATG 6 cut(s) 42, 175, 600, 673, 691, 1320
BseLI CCNNNNNNNGG 5 cut(s) 605, 1358, 1450, 1542, 1653
BseMI GCAATG 3 cut(s) 150, 358, 1128
BseNI ACTGG 5 cut(s) 331, 461, 651, 1180, 1417
BseX3I CGGCCG 1 cut(s) 1496
BseXI GCAGC 6 cut(s) 108, 184, 454, 706, 780, 889
BseYI CCCAGC 2 cut(s) 715, 950
Bsh1285I CGRYCG 1 cut(s) 1499
BshFI GGCC 6 cut(s) 134, 338, 980, 1146, 1362, 1498
BshNI GGYRCC 2 cut(s) 1283, 1637
BshVI ATCGAT 1 cut(s) 258
BsiEI CGRYCG 1 cut(s) 1499
BsiHKCI CYCGRG 1 cut(s) 1513
BsiSI CCGG 6 cut(s) 1021, 1143, 1281, 1563, 1634, 1715
BslFI GGGAC 3 cut(s) 1427, 1559, 1597
BslI CCNNNNNNNGG 5 cut(s) 605, 1358, 1450, 1542, 1653
BsmAI GTCTC 2 cut(s) 665, 1728
BsmBI CGTCTC 1 cut(s) 665
BsmFI GGGAC 3 cut(s) 1427, 1559, 1597
BsmI GAATGC 1 cut(s) 179
BsnI GGCC 6 cut(s) 134, 338, 980, 1146, 1362, 1498
Bso31I GGTCTC 1 cut(s) 1728
BsoBI CYCGRG 1 cut(s) 1513
Bsp1407I TGTACA 1 cut(s) 999
Bsp143I GATC 3 cut(s) 445, 990, 1032
BspACI CCGC 4 cut(s) 240, 272, 1402, 1495
BspANI GGCC 6 cut(s) 134, 338, 980, 1146, 1362, 1498
BspDI ATCGAT 1 cut(s) 258
BspLI GGNNCC 6 cut(s) 713, 1018, 1147, 1285, 1632, 1639
BspMAI CTGCAG 3 cut(s) 724, 1211, 1436
BspQI GCTCTTC 1 cut(s) 1707
BspT107I GGYRCC 2 cut(s) 1283, 1637
BspTI CTTAAG 2 cut(s) 449, 518
BspTNI GGTCTC 1 cut(s) 1728
BsrDI GCAATG 3 cut(s) 150, 358, 1128
BsrFI RCCGGY 2 cut(s) 1142, 1562
BsrGI TGTACA 1 cut(s) 999
BsrI ACTGG 5 cut(s) 331, 461, 651, 1180, 1417
BssAI RCCGGY 2 cut(s) 1142, 1562
BssECI CCNNGG 7 cut(s) 129, 604, 922, 1019, 1071, 1499, 1771
BssMI GATC 3 cut(s) 445, 990, 1032
BssNI GRCGYC 1 cut(s) 1218
BssT1I CCWWGG 2 cut(s) 129, 604
Bst2UI CCWGG 5 cut(s) 188, 665, 923, 1073, 1772
Bst4CI ACNGT 7 cut(s) 638, 976, 1271, 1288, 1318, 1522, 1605
Bst6I CTCTTC 1 cut(s) 1707
BstACI GRCGYC 1 cut(s) 1218
BstAFI CTTAAG 2 cut(s) 449, 518
BstAPI GCANNNNNTGC 1 cut(s) 1619
BstAUI TGTACA 1 cut(s) 999
BstBAI YACGTR 1 cut(s) 1240
BstC8I GCNNGC 2 cut(s) 1144, 1245
BstDEI CTNAG 1 cut(s) 574
BstDSI CCRYGG 1 cut(s) 1499
BstF5I GGATG 6 cut(s) 42, 175, 600, 673, 691, 1320
BstH2I RGCGCY 1 cut(s) 216
BstHHI GCGC 1 cut(s) 215
BstKTI GATC 3 cut(s) 448, 993, 1035
BstMAI GTCTC 2 cut(s) 665, 1728
BstMBI GATC 3 cut(s) 445, 990, 1032
BstMCI CGRYCG 1 cut(s) 1499
BstMWI GCNNNNNNNGC 9 cut(s) 102, 140, 183, 197, 854, 902, 1047, 1576, 1619
BstNI CCWGG 5 cut(s) 188, 665, 923, 1073, 1772
BstNSI RCATGY 1 cut(s) 1006
BstSCI CCNGG 8 cut(s) 186, 663, 921, 1019, 1071, 1633, 1714, 1770
BstSFI CTRYAG 3 cut(s) 720, 1207, 1432
BstV1I GCAGC 6 cut(s) 108, 184, 454, 706, 780, 889
BstV2I GAAGAC 3 cut(s) 374, 519, 579
BstXI CCANNNNNNTGG 2 cut(s) 1417, 1566
BstZI CGGCCG 1 cut(s) 1496
Bsu15I ATCGAT 1 cut(s) 258
BsuI GTATCC 1 cut(s) 1664
BsuRI GGCC 6 cut(s) 134, 338, 980, 1146, 1362, 1498
BsuTUI ATCGAT 1 cut(s) 258
BtgI CCRYGG 1 cut(s) 1499
BtgZI GCGATG 1 cut(s) 554
BtsCI GGATG 6 cut(s) 42, 175, 600, 673, 691, 1320
BtsI GCAGTG 3 cut(s) 138, 1077, 1170
BtsIMutI CAGTG 7 cut(s) 138, 324, 469, 1077, 1170, 1410, 1601
Cac8I GCNNGC 2 cut(s) 1144, 1245
CfoI GCGC 1 cut(s) 215
Cfr10I RCCGGY 2 cut(s) 1142, 1562
Cfr13I GGNCC 4 cut(s) 1016, 1026, 1145, 1631
ClaI ATCGAT 1 cut(s) 258
CseI GACGC 2 cut(s) 203, 1226
Csp6I GTAC 6 cut(s) 907, 1000, 1237, 1284, 1510, 1760
CviQI GTAC 6 cut(s) 907, 1000, 1237, 1284, 1510, 1760
DdeI CTNAG 1 cut(s) 574
DpnI GATC 3 cut(s) 447, 992, 1034
DpnII GATC 3 cut(s) 445, 990, 1032
DraI TTTAAA 1 cut(s) 1779
EaeI YGGCCR 3 cut(s) 978, 1360, 1496
EagI CGGCCG 1 cut(s) 1496
Eam1104I CTCTTC 1 cut(s) 1707
EarI CTCTTC 1 cut(s) 1707
EclXI CGGCCG 1 cut(s) 1496
Eco130I CCWWGG 2 cut(s) 129, 604
Eco31I GGTCTC 1 cut(s) 1728
Eco32I GATATC 1 cut(s) 474
Eco47I GGWCC 3 cut(s) 1016, 1026, 1631
Eco52I CGGCCG 1 cut(s) 1496
Eco88I CYCGRG 1 cut(s) 1513
EcoRII CCWGG 5 cut(s) 186, 663, 921, 1071, 1770
EcoRV GATATC 1 cut(s) 474
EcoT14I CCWWGG 2 cut(s) 129, 604
EcoT22I ATGCAT 2 cut(s) 179, 494
ErhI CCWWGG 2 cut(s) 129, 604
Esp3I CGTCTC 1 cut(s) 665
FaqI GGGAC 3 cut(s) 1427, 1559, 1597
FauI CCCGC 1 cut(s) 1395
FbaI TGATCA 1 cut(s) 1032
Fnu4HI GCNGC 9 cut(s) 97, 198, 240, 273, 468, 720, 769, 903, 1496
FokI GGATG 6 cut(s) 29, 182, 587, 680, 698, 1307
Fsp4HI GCNGC 9 cut(s) 97, 198, 240, 273, 468, 720, 769, 903, 1496
FspBI CTAG 4 cut(s) 605, 1571, 1595, 1786
GlaI GCGC 1 cut(s) 214
GluI GCNGC 9 cut(s) 97, 198, 240, 273, 468, 720, 769, 903, 1496
GsaI CCCAGC 2 cut(s) 719, 954
HaeII RGCGCY 1 cut(s) 216
HaeIII GGCC 6 cut(s) 134, 338, 980, 1146, 1362, 1498
HapII CCGG 6 cut(s) 1021, 1143, 1281, 1563, 1634, 1715
HgaI GACGC 2 cut(s) 203, 1226
HhaI GCGC 1 cut(s) 215
Hin1I GRCGYC 1 cut(s) 1218
Hin6I GCGC 1 cut(s) 213
HinP1I GCGC 1 cut(s) 213
HincII GTYRAC 1 cut(s) 1291
HindII GTYRAC 1 cut(s) 1291
HindIII AAGCTT 1 cut(s) 1048
HpaII CCGG 6 cut(s) 1021, 1143, 1281, 1563, 1634, 1715
HphI GGTGA 4 cut(s) 277, 902, 1057, 1316
Hpy166II GTNNAC 6 cut(s) 152, 872, 1000, 1291, 1334, 1760
Hpy188I TCNGA 7 cut(s) 236, 289, 990, 1134, 1175, 1186, 1537
Hpy188III TCNNGA 5 cut(s) 482, 1324, 1426, 1474, 1515
Hpy8I GTNNAC 6 cut(s) 152, 872, 1000, 1291, 1334, 1760
Hpy99I CGWCG 3 cut(s) 124, 660, 806
HpyAV CCTTC 4 cut(s) 4, 349, 1207, 1647
HpyCH4III ACNGT 7 cut(s) 638, 976, 1271, 1288, 1318, 1522, 1605
HpyCH4IV ACGT 1 cut(s) 1239
HpyF10VI GCNNNNNNNGC 9 cut(s) 102, 140, 183, 197, 854, 902, 1047, 1576, 1619
HpyF3I CTNAG 1 cut(s) 574
HpySE526I ACGT 1 cut(s) 1239
Hsp92I GRCGYC 1 cut(s) 1218
HspAI GCGC 1 cut(s) 213
KpnI GGTACC 1 cut(s) 1287
KroI GCCGGC 1 cut(s) 1142
KroNI GCCGGC 1 cut(s) 1144
Ksp22I TGATCA 1 cut(s) 1032
Kzo9I GATC 3 cut(s) 445, 990, 1032
LguI GCTCTTC 1 cut(s) 1707
LmnI GCTCC 3 cut(s) 56, 549, 601
Lsp1109I GCAGC 6 cut(s) 108, 184, 454, 706, 780, 889
LweI GCATC 3 cut(s) 531, 1071, 1165
MaeI CTAG 4 cut(s) 605, 1571, 1595, 1786
MaeII ACGT 1 cut(s) 1239
MaeIII GTNAC 6 cut(s) 136, 835, 970, 1304, 1375, 1642
MalI GATC 3 cut(s) 447, 992, 1034
MboI GATC 3 cut(s) 445, 990, 1032
MboII GAAGA 9 cut(s) 360, 374, 524, 579, 939, 1192, 1401, 1516, 1694
MfeI CAATTG 2 cut(s) 579, 885
MlsI TGGCCA 1 cut(s) 980
MluCI AATT 9 cut(s) 33, 319, 579, 611, 885, 1256, 1538, 1706, 1720
MluNI TGGCCA 1 cut(s) 980
MlyI GAGTC 3 cut(s) 1185, 1301, 1541
MmeI TCCRAC 4 cut(s) 34, 342, 1164, 1579
MnlI CCTC 6 cut(s) 337, 433, 529, 1017, 1338, 1690
Mox20I TGGCCA 1 cut(s) 980
Mph1103I ATGCAT 2 cut(s) 179, 494
MroNI GCCGGC 1 cut(s) 1142
MroXI GAANNNNTTC 3 cut(s) 381, 458, 734
MscI TGGCCA 1 cut(s) 980
MseI TTAA 3 cut(s) 450, 519, 1778
MslI CAYNNNNRTG 3 cut(s) 47, 143, 1094
Msp20I TGGCCA 1 cut(s) 980
MspA1I CMGCKG 1 cut(s) 719
MspCI CTTAAG 2 cut(s) 449, 518
MspI CCGG 6 cut(s) 1021, 1143, 1281, 1563, 1634, 1715
MspR9I CCNGG 8 cut(s) 188, 665, 923, 1021, 1073, 1635, 1716, 1772
MunI CAATTG 2 cut(s) 579, 885
Mva1269I GAATGC 1 cut(s) 179
MvaI CCWGG 5 cut(s) 188, 665, 923, 1073, 1772
MwoI GCNNNNNNNGC 9 cut(s) 102, 140, 183, 197, 854, 902, 1047, 1576, 1619
NaeI GCCGGC 1 cut(s) 1144
NciI CCSGG 3 cut(s) 1021, 1635, 1716
NdeII GATC 3 cut(s) 445, 990, 1032
NgoMIV GCCGGC 1 cut(s) 1142
NlaIV GGNNCC 6 cut(s) 713, 1018, 1147, 1285, 1632, 1639
NmuCI GTSAC 3 cut(s) 136, 1304, 1375
NsiI ATGCAT 2 cut(s) 179, 494
NspI RCATGY 1 cut(s) 1006
PaeR7I CTCGAG 1 cut(s) 1513
PciI ACATGT 1 cut(s) 1002
PciSI GCTCTTC 1 cut(s) 1707
PctI GAATGC 1 cut(s) 179
PdiI GCCGGC 1 cut(s) 1144
PdmI GAANNNNTTC 3 cut(s) 381, 458, 734
PfeI GAWTC 8 cut(s) 205, 365, 485, 502, 918, 985, 1470, 1477
PfoI TCCNGGA 1 cut(s) 663
PkrI GCNGC 9 cut(s) 98, 199, 241, 274, 469, 721, 770, 904, 1497
PleI GAGTC 3 cut(s) 1184, 1301, 1540
PpsI GAGTC 3 cut(s) 1184, 1301, 1540
Ppu21I YACGTR 1 cut(s) 1240
PscI ACATGT 1 cut(s) 1002
Psp6I CCWGG 5 cut(s) 186, 663, 921, 1071, 1770
PspFI CCCAGC 2 cut(s) 715, 950
PspGI CCWGG 5 cut(s) 186, 663, 921, 1071, 1770
PspN4I GGNNCC 6 cut(s) 713, 1018, 1147, 1285, 1632, 1639
PspPI GGNCC 4 cut(s) 1016, 1026, 1145, 1631
PstI CTGCAG 3 cut(s) 724, 1211, 1436
PvuII CAGCTG 1 cut(s) 719
RsaI GTAC 6 cut(s) 908, 1001, 1238, 1285, 1511, 1761
RsaNI GTAC 6 cut(s) 907, 1000, 1237, 1284, 1510, 1760
RseI CAYNNNNRTG 3 cut(s) 47, 143, 1094
SapI GCTCTTC 1 cut(s) 1707
SaqAI TTAA 3 cut(s) 450, 519, 1778
SatI GCNGC 9 cut(s) 97, 198, 240, 273, 468, 720, 769, 903, 1496
Sau3AI GATC 3 cut(s) 445, 990, 1032
Sau96I GGNCC 4 cut(s) 1016, 1026, 1145, 1631
SchI GAGTC 3 cut(s) 1185, 1301, 1541
ScrFI CCNGG 8 cut(s) 188, 665, 923, 1021, 1073, 1635, 1716, 1772
SfaNI GCATC 3 cut(s) 531, 1071, 1165
SfcI CTRYAG 3 cut(s) 720, 1207, 1432
Sfr274I CTCGAG 1 cut(s) 1513
SinI GGWCC 3 cut(s) 1016, 1026, 1631
SlaI CTCGAG 1 cut(s) 1513
SmiMI CAYNNNNRTG 3 cut(s) 47, 143, 1094
SmlI CTYRAG 3 cut(s) 449, 518, 1513
SmoI CTYRAG 3 cut(s) 449, 518, 1513
Sse9I AATT 9 cut(s) 33, 319, 579, 611, 885, 1256, 1538, 1706, 1720
SsiI CCGC 4 cut(s) 240, 272, 1402, 1495
SspI AATATT 1 cut(s) 389
SspMI CTAG 4 cut(s) 605, 1571, 1595, 1786
StyD4I CCNGG 8 cut(s) 186, 663, 921, 1019, 1071, 1633, 1714, 1770
StyI CCWWGG 2 cut(s) 129, 604
TaaI ACNGT 7 cut(s) 638, 976, 1271, 1288, 1318, 1522, 1605
TaiI ACGT 1 cut(s) 1242
TaqI TCGA 5 cut(s) 119, 258, 342, 375, 1514
TasI AATT 9 cut(s) 33, 319, 579, 611, 885, 1256, 1538, 1706, 1720
TatI WGTACW 2 cut(s) 999, 1509
TauI GCSGC 3 cut(s) 242, 275, 1498
TfiI GAWTC 8 cut(s) 205, 365, 485, 502, 918, 985, 1470, 1477
Tru1I TTAA 3 cut(s) 450, 519, 1778
Tru9I TTAA 3 cut(s) 450, 519, 1778
TscAI CASTG 7 cut(s) 145, 331, 469, 1084, 1170, 1417, 1608
TseFI GTSAC 3 cut(s) 136, 1304, 1375
TseI GCWGC 6 cut(s) 96, 197, 467, 719, 768, 902
Tsp45I GTSAC 3 cut(s) 136, 1304, 1375
TspDTI ATGAA 9 cut(s) 186, 443, 545, 641, 702, 1078, 1099, 1285, 1370
TspGWI ACGGA 2 cut(s) 698, 1700
TspRI CASTG 7 cut(s) 145, 331, 469, 1084, 1170, 1417, 1608
Vha464I CTTAAG 2 cut(s) 449, 518
VpaK11BI GGWCC 3 cut(s) 1016, 1026, 1631
XapI RAATTY 3 cut(s) 33, 611, 1538
XceI RCATGY 1 cut(s) 1006
XcmI CCANNNNNNNNNTGG 2 cut(s) 331, 850
XhoI CTCGAG 1 cut(s) 1513
XmaJI CCTAGG 1 cut(s) 604
XmnI GAANNNNTTC 3 cut(s) 381, 458, 734
XspI CTAG 4 cut(s) 605, 1571, 1595, 1786
Zsp2I ATGCAT 2 cut(s) 179, 494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.