Rw5G016320

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000078
Physical Location & Seq
Forward (+)
20458443 .. 20477495
19053 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G016320.1

Sequence Viewer

Length: 1593 bp
ATGTTTAAGAGCCAGAGACAAACAGTTAAATCGATCTCTGAAAATATGAGTACTACTGCATTCCCAGTATTCATTGCTTCAGGCTTTGTTTTTCTGTTCCTTCTGATCTTCAAGATCTATCACACACAATGGCAGACTCCCACTCGCCTACAGAAACTGATGGCTCTGCAGGGAATCAAGGGCCCTTCTTACAGACCTGTCTATGGAAACGCCAAAGAAATCTGGAACTTGAAGAAGGAGGCCATGAGCAGACCCAAAGGTTTATCACATGACATACTTCCTGTAGTTGAACCTCAGTATCACTCGTGGCTTAAGATATATGGGAATATTTTTCTTCAGTGGTTAGGTACCAAAGCTCAGTTGGTAGTTATGGAACCAAAGTTGTGCAAAGAGATACTGAATAACACAGACAGAGTTTATCGGCAAGTGCAACAACAAGGGATTGGGAAGAGGCTGTTAGGAAACAGCCTCGGGACTTCTGAAGGAGAACAATGGCTAAAACTTCGAAAGTTGGCCACCCATGCCTTCCATGGAGAGAGGTTAAAAAATATGGTTCCAGATATGATAGCTAGTGCTGAGAAGATGCTGCAAAGGTTGCAAAATAGCGAGGACAAAGAGATCGAGATGTACCAAGAATTTAAGTTGTTTACTTCAGAGGTGATTGCCAAAACAGCATTTGGCAGCAGCTATTTAGAAGGGAAGAAAATTTTCGACATGTTGACAGAGTTATCCGTGTTACTGTTCAAAAATTCTTATAACATCAGGCTTCCCGGTATCCGAAAGCTTTTTAAAACTAGTGATGAAATTCAAGCAGAAAAGCTTGAGAAGGAAATACGTGACATGATATTGGAGACTGTAAAGAAAAGAGAAAACAAGGCAGTGAGTCAGCAAGATGAACACAACTTTGGTGGGGATTTTCTTGGATTACTTTTAAAGGCTCATCATGATGACAGTAATGACGAATATAGGGTCACGATAGATGATATAATTGATCAGTGTAAGGCAATGTACTTTGCTGGACAAGAAACCACTAATGGTTTGCTGGTTTGGACCGTGTTTCTTCTGGCACTCCATCAGGATTGGCAAAAGGAAGCGAGAAAAGAAGTCCTGCATCTATTTGGAAAACATAATCCAAATTTCGATGGCATTTCCAGACTAAAAACTATGAATATGATCCTCAATGAGTCTCTAAGGTTATATCCTCCTGTCAGTCAACTTACAAAGATTACTGAAAGGGAAAGCAGGCTGGGGAAGTTGATTGTTCCTGCTAATATTGATGTAGTCGTCCCAACTTTAGCACTTCACCATGACCCTCAAACATGGGGACAAGACGTGGAAGTTTTCAAACCAGAGCGGTTCTCAGAAGGGGTTGCTAAAGCTACCAAGGATAACATGGCTGCATTCATACCCTTTGGAATGGGACCTAGAATTTGTGTGGGTTTCAACCTTGCCACCACTGAAACTAAGATTGCTCTGTCAATGATTCTGCAACGCTACTCCTTCACTCTTTCCCCGGGTTACGTTCACTCTCCTCTTCATTTTCTTACAACTCGCCCACAGCATGGAGTTCAAGTAATGCTACACTCCCTGTGA

Protein Analysis

530

Amino Acids

60.83

Weight (kDa)

9.22

Isoelectric Point (pI)

35.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 105 - 507 1.7e-77 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 756
Acc65I GGTACC 1 cut(s) 347
AccB1I GGYRCC 1 cut(s) 347
AccB7I CCANNNNNTGG 1 cut(s) 1562
AccBSI CCGCTC 1 cut(s) 1354
AciI CCGC 1 cut(s) 1354
AclWI GGATC 1 cut(s) 1168
AcoI YGGCCR 1 cut(s) 513
AcsI RAATTY 6 cut(s) 635, 705, 748, 804, 1135, 1428
AcuI CTGAAG 4 cut(s) 63, 320, 501, 636
AfaI GTAC 4 cut(s) 52, 349, 629, 1010
AfiI CCNNNNNNNGG 2 cut(s) 203, 1562
AflII CTTAAG 1 cut(s) 311
AflIII ACRYGT 1 cut(s) 714
AgsI TTSAA 8 cut(s) 112, 232, 290, 745, 809, 1345, 1444, 1571
AhlI ACTAGT 1 cut(s) 794
AjiI CACGTC 1 cut(s) 1333
AjuI GAANNNNNNNTTGG 2 cut(s) 888, 920
AluBI AGCT 6 cut(s) 356, 569, 687, 784, 820, 1379
AluI AGCT 6 cut(s) 356, 569, 687, 784, 820, 1379
Alw26I GTCTC 3 cut(s) 10, 845, 1191
AlwI GGATC 1 cut(s) 1168
AlwNI CAGNNNCTG 1 cut(s) 157
Ama87I CYCGRG 2 cut(s) 470, 1513
AoxI GGCC 3 cut(s) 181, 240, 513
ApaI GGGCCC 1 cut(s) 185
ApeKI GCWGC 4 cut(s) 586, 681, 684, 1397
ApoI RAATTY 6 cut(s) 635, 705, 748, 804, 1135, 1428
ArsI GACNNNNNNTTYG 4 cut(s) 954, 986, 1413, 1445
Asp700I GAANNNNTTC 1 cut(s) 707
Asp718I GGTACC 1 cut(s) 347
AspS9I GGNCC 4 cut(s) 181, 182, 1050, 1421
AsuC2I CCSGG 3 cut(s) 771, 1514, 1515
AsuHPI GGTGA 2 cut(s) 670, 1295
AsuII TTCGAA 1 cut(s) 505
AvaI CYCGRG 2 cut(s) 470, 1513
AvaII GGWCC 2 cut(s) 1050, 1421
BaeGI GKGCMC 1 cut(s) 185
BaeI ACNNNNGTAYC 2 cut(s) 281, 314
BalI TGGCCA 1 cut(s) 515
BanI GGYRCC 1 cut(s) 347
BanII GRGCYC 1 cut(s) 185
BauI CACGAG 1 cut(s) 304
BbvI GCAGC 4 cut(s) 573, 693, 696, 1384
BccI CCATC 3 cut(s) 154, 1080, 1136
BciVI GTATCC 1 cut(s) 785
BclI TGATCA 1 cut(s) 991
BcnI CCSGG 3 cut(s) 771, 1514, 1515
BcoDI GTCTC 3 cut(s) 10, 845, 1191
BcuI ACTAGT 1 cut(s) 794
BfaI CTAG 3 cut(s) 570, 795, 1425
BfmI CTRYAG 3 cut(s) 149, 167, 282
BfrI CTTAAG 1 cut(s) 311
BfuI GTATCC 1 cut(s) 785
BglII AGATCT 1 cut(s) 114
BisI GCNGC 4 cut(s) 587, 682, 685, 1398
BlsI GCNGC 4 cut(s) 588, 683, 686, 1399
BmcAI AGTACT 1 cut(s) 52
Bme1390I CCNGG 3 cut(s) 771, 1514, 1515
Bme18I GGWCC 2 cut(s) 1050, 1421
BmeT110I CYCGRG 2 cut(s) 470, 1513
BmgBI CACGTC 1 cut(s) 1333
BmgT120I GGNCC 4 cut(s) 181, 182, 1050, 1421
BmiI GGNNCC 5 cut(s) 183, 349, 375, 555, 1422
BmrFI CCNGG 3 cut(s) 771, 1514, 1515
BmrI ACTGGG 1 cut(s) 59
BmsI GCATC 2 cut(s) 573, 1120
BmuI ACTGGG 1 cut(s) 59
BplI GAGNNNNNCTC 2 cut(s) 1343, 1375
Bpu14I TTCGAA 1 cut(s) 505
BpuEI CTTGAG 1 cut(s) 842
BpuMI CCSGG 3 cut(s) 771, 1514, 1515
Bsa29I ATCGAT 1 cut(s) 32
BsaAI YACGTR 1 cut(s) 836
BsaJI CCNNGG 5 cut(s) 469, 529, 1383, 1512, 1513
BsaXI ACNNNNNCTCC 2 cut(s) 1557, 1587
Bsc4I CCNNNNNNNGG 2 cut(s) 203, 1562
Bse1I ACTGG 1 cut(s) 65
Bse3DI GCAATG 2 cut(s) 72, 1011
BseCI ATCGAT 1 cut(s) 32
BseDI CCNNGG 5 cut(s) 469, 529, 1383, 1512, 1513
BseLI CCNNNNNNNGG 2 cut(s) 203, 1562
BseMI GCAATG 2 cut(s) 72, 1011
BseMII CTCAG 4 cut(s) 308, 371, 567, 1374
BseNI ACTGG 1 cut(s) 65
BseRI GAGGAG 1 cut(s) 1521
BseSI GKGCMC 1 cut(s) 185
BseXI GCAGC 4 cut(s) 573, 693, 696, 1384
BseYI CCCAGC 1 cut(s) 1246
BshFI GGCC 3 cut(s) 183, 242, 515
BshNI GGYRCC 1 cut(s) 347
BshVI ATCGAT 1 cut(s) 32
BsiHKCI CYCGRG 2 cut(s) 470, 1513
BsiSI CCGG 2 cut(s) 771, 1514
BslFI GGGAC 4 cut(s) 487, 1271, 1338, 1434
BslI CCNNNNNNNGG 2 cut(s) 203, 1562
BsmAI GTCTC 3 cut(s) 10, 845, 1191
BsmFI GGGAC 4 cut(s) 487, 1271, 1338, 1434
BsmI GAATGC 2 cut(s) 59, 1400
BsnI GGCC 3 cut(s) 183, 242, 515
BsoBI CYCGRG 2 cut(s) 470, 1513
Bsp119I TTCGAA 1 cut(s) 505
Bsp120I GGGCCC 1 cut(s) 181
Bsp1286I GDGCHC 1 cut(s) 185
Bsp143I GATC 6 cut(s) 33, 105, 114, 618, 991, 1173
Bsp19I CCATGG 1 cut(s) 529
BspACI CCGC 1 cut(s) 1354
BspANI GGCC 3 cut(s) 183, 242, 515
BspCNI CTCAG 4 cut(s) 307, 370, 568, 1373
BspDI ATCGAT 1 cut(s) 32
BspHI TCATGA 1 cut(s) 943
BspLI GGNNCC 5 cut(s) 183, 349, 375, 555, 1422
BspMAI CTGCAG 1 cut(s) 171
BspPI GGATC 1 cut(s) 1168
BspT104I TTCGAA 1 cut(s) 505
BspT107I GGYRCC 1 cut(s) 347
BspTI CTTAAG 1 cut(s) 311
BsrBI CCGCTC 1 cut(s) 1354
BsrDI GCAATG 2 cut(s) 72, 1011
BsrI ACTGG 1 cut(s) 65
BssECI CCNNGG 5 cut(s) 469, 529, 1383, 1512, 1513
BssMI GATC 6 cut(s) 33, 105, 114, 618, 991, 1173
BssSI CACGAG 1 cut(s) 304
BssT1I CCWWGG 2 cut(s) 529, 1383
Bst2BI CACGAG 1 cut(s) 304
Bst4CI ACNGT 5 cut(s) 25, 741, 856, 953, 1054
Bst6I CTCTTC 2 cut(s) 443, 1539
BstAFI CTTAAG 1 cut(s) 311
BstAPI GCANNNNNTGC 1 cut(s) 595
BstBAI YACGTR 1 cut(s) 836
BstBI TTCGAA 1 cut(s) 505
BstC8I GCNNGC 1 cut(s) 1244
BstDEI CTNAG 6 cut(s) 294, 357, 576, 1190, 1360, 1464
BstDSI CCRYGG 1 cut(s) 529
BstKTI GATC 6 cut(s) 36, 108, 117, 621, 994, 1176
BstMAI GTCTC 3 cut(s) 10, 845, 1191
BstMBI GATC 6 cut(s) 33, 105, 114, 618, 991, 1173
BstMWI GCNNNNNNNGC 3 cut(s) 521, 595, 671
BstNSI RCATGY 1 cut(s) 718
BstSCI CCNGG 3 cut(s) 769, 1512, 1513
BstSFI CTRYAG 3 cut(s) 149, 167, 282
BstSLI GKGCMC 1 cut(s) 185
BstV1I GCAGC 4 cut(s) 573, 693, 696, 1384
BstX2I RGATCY 1 cut(s) 114
BstYI RGATCY 1 cut(s) 114
Bsu15I ATCGAT 1 cut(s) 32
BsuI GTATCC 1 cut(s) 785
BsuRI GGCC 3 cut(s) 183, 242, 515
BsuTUI ATCGAT 1 cut(s) 32
BtgI CCRYGG 1 cut(s) 529
BtrI CACGTC 1 cut(s) 1333
BtsI GCAGTG 1 cut(s) 885
BtsIMutI CAGTG 4 cut(s) 344, 885, 1001, 1455
Cac8I GCNNGC 1 cut(s) 1244
CaiI CAGNNNCTG 1 cut(s) 157
CciI TCATGA 1 cut(s) 943
Cfr13I GGNCC 4 cut(s) 181, 182, 1050, 1421
Cfr9I CCCGGG 1 cut(s) 1513
ClaI ATCGAT 1 cut(s) 32
Csp6I GTAC 4 cut(s) 51, 348, 628, 1009
CspCI CAANNNNNGTGG 2 cut(s) 889, 924
CviQI GTAC 4 cut(s) 51, 348, 628, 1009
DdeI CTNAG 6 cut(s) 294, 357, 576, 1190, 1360, 1464
DpnI GATC 6 cut(s) 35, 107, 116, 620, 993, 1175
DpnII GATC 6 cut(s) 33, 105, 114, 618, 991, 1173
DraI TTTAAA 2 cut(s) 790, 933
EaeI YGGCCR 1 cut(s) 513
Eam1104I CTCTTC 2 cut(s) 443, 1539
EarI CTCTTC 2 cut(s) 443, 1539
Eco130I CCWWGG 2 cut(s) 529, 1383
Eco24I GRGCYC 1 cut(s) 185
Eco47I GGWCC 2 cut(s) 1050, 1421
Eco57I CTGAAG 4 cut(s) 63, 320, 501, 636
Eco88I CYCGRG 2 cut(s) 470, 1513
EcoO109I RGGNCCY 3 cut(s) 181, 182, 1421
EcoT14I CCWWGG 2 cut(s) 529, 1383
EcoT38I GRGCYC 1 cut(s) 185
ErhI CCWWGG 2 cut(s) 529, 1383
FaqI GGGAC 4 cut(s) 487, 1271, 1338, 1434
FbaI TGATCA 1 cut(s) 991
Fnu4HI GCNGC 4 cut(s) 587, 682, 685, 1398
FriOI GRGCYC 1 cut(s) 185
Fsp4HI GCNGC 4 cut(s) 587, 682, 685, 1398
FspBI CTAG 3 cut(s) 570, 795, 1425
GluI GCNGC 4 cut(s) 587, 682, 685, 1398
GsaI CCCAGC 1 cut(s) 1250
HaeIII GGCC 3 cut(s) 183, 242, 515
HapII CCGG 2 cut(s) 771, 1514
HincII GTYRAC 2 cut(s) 720, 1214
HindII GTYRAC 2 cut(s) 720, 1214
HindIII AAGCTT 2 cut(s) 782, 818
HinfI GANTC 5 cut(s) 136, 174, 883, 1184, 1483
HpaII CCGG 2 cut(s) 771, 1514
HphI GGTGA 2 cut(s) 670, 1295
Hpy166II GTNNAC 4 cut(s) 648, 720, 1214, 1525
Hpy188I TCNGA 6 cut(s) 40, 105, 481, 655, 779, 1363
Hpy188III TCNNGA 9 cut(s) 112, 223, 472, 557, 622, 944, 973, 1076, 1152
Hpy8I GTNNAC 4 cut(s) 648, 720, 1214, 1525
HpyAV CCTTC 9 cut(s) 110, 195, 229, 476, 535, 689, 820, 1358, 1510
HpyCH4III ACNGT 5 cut(s) 25, 741, 856, 953, 1054
HpyCH4IV ACGT 3 cut(s) 835, 1332, 1521
HpyCH4V TGCA 9 cut(s) 59, 169, 387, 430, 589, 598, 1111, 1400, 1489
HpyF10VI GCNNNNNNNGC 3 cut(s) 521, 595, 671
HpyF3I CTNAG 6 cut(s) 294, 357, 576, 1190, 1360, 1464
HpySE526I ACGT 3 cut(s) 835, 1332, 1521
KpnI GGTACC 1 cut(s) 351
Ksp22I TGATCA 1 cut(s) 991
Kzo9I GATC 6 cut(s) 33, 105, 114, 618, 991, 1173
Lsp1109I GCAGC 4 cut(s) 573, 693, 696, 1384
LweI GCATC 2 cut(s) 573, 1120
MaeI CTAG 3 cut(s) 570, 795, 1425
MaeII ACGT 3 cut(s) 835, 1332, 1521
MaeIII GTNAC 4 cut(s) 735, 836, 970, 1517
MalI GATC 6 cut(s) 35, 107, 116, 620, 993, 1175
MbiI CCGCTC 1 cut(s) 1354
MboI GATC 6 cut(s) 33, 105, 114, 618, 991, 1173
MboII GAAGA 8 cut(s) 100, 244, 326, 460, 592, 712, 1052, 1526
MflI RGATCY 1 cut(s) 114
MhlI GDGCHC 1 cut(s) 185
MlsI TGGCCA 1 cut(s) 515
MluCI AATT 7 cut(s) 635, 705, 748, 804, 987, 1135, 1428
MluNI TGGCCA 1 cut(s) 515
MlyI GAGTC 3 cut(s) 130, 892, 1193
Mox20I TGGCCA 1 cut(s) 515
MroXI GAANNNNTTC 1 cut(s) 707
MscI TGGCCA 1 cut(s) 515
MseI TTAA 7 cut(s) 6, 27, 312, 542, 639, 789, 932
MslI CAYNNNNRTG 1 cut(s) 945
Msp20I TGGCCA 1 cut(s) 515
MspCI CTTAAG 1 cut(s) 311
MspI CCGG 2 cut(s) 771, 1514
MspR9I CCNGG 3 cut(s) 771, 1514, 1515
Mva1269I GAATGC 2 cut(s) 59, 1400
MwoI GCNNNNNNNGC 3 cut(s) 521, 595, 671
NciI CCSGG 3 cut(s) 771, 1514, 1515
NcoI CCATGG 1 cut(s) 529
NdeII GATC 6 cut(s) 33, 105, 114, 618, 991, 1173
NlaIV GGNNCC 5 cut(s) 183, 349, 375, 555, 1422
NmuCI GTSAC 2 cut(s) 836, 970
NspI RCATGY 1 cut(s) 718
NspV TTCGAA 1 cut(s) 505
PagI TCATGA 1 cut(s) 943
PciI ACATGT 1 cut(s) 714
PctI GAATGC 2 cut(s) 59, 1400
PdmI GAANNNNTTC 1 cut(s) 707
PfeI GAWTC 2 cut(s) 174, 1483
PflMI CCANNNNNTGG 1 cut(s) 1562
PkrI GCNGC 4 cut(s) 588, 683, 686, 1399
PleI GAGTC 3 cut(s) 130, 891, 1192
PpsI GAGTC 3 cut(s) 130, 891, 1192
Ppu21I YACGTR 1 cut(s) 836
PpuMI RGGWCCY 1 cut(s) 1421
PscI ACATGT 1 cut(s) 714
PsiI TTATAA 1 cut(s) 756
Psp5II RGGWCCY 1 cut(s) 1421
PspFI CCCAGC 1 cut(s) 1246
PspN4I GGNNCC 5 cut(s) 183, 349, 375, 555, 1422
PspOMI GGGCCC 1 cut(s) 181
PspPI GGNCC 4 cut(s) 181, 182, 1050, 1421
PspPPI RGGWCCY 1 cut(s) 1421
PstI CTGCAG 1 cut(s) 171
PstNI CAGNNNCTG 1 cut(s) 157
PsuI RGATCY 1 cut(s) 114
RsaI GTAC 4 cut(s) 52, 349, 629, 1010
RsaNI GTAC 4 cut(s) 51, 348, 628, 1009
RseI CAYNNNNRTG 1 cut(s) 945
SaqAI TTAA 7 cut(s) 6, 27, 312, 542, 639, 789, 932
SatI GCNGC 4 cut(s) 587, 682, 685, 1398
Sau3AI GATC 6 cut(s) 33, 105, 114, 618, 991, 1173
Sau96I GGNCC 4 cut(s) 181, 182, 1050, 1421
ScaI AGTACT 1 cut(s) 52
SchI GAGTC 3 cut(s) 130, 892, 1193
ScrFI CCNGG 3 cut(s) 771, 1514, 1515
SduI GDGCHC 1 cut(s) 185
SfaNI GCATC 2 cut(s) 573, 1120
SfcI CTRYAG 3 cut(s) 149, 167, 282
SfuI TTCGAA 1 cut(s) 505
SinI GGWCC 2 cut(s) 1050, 1421
SmaI CCCGGG 1 cut(s) 1515
SmiMI CAYNNNNRTG 1 cut(s) 945
SmlI CTYRAG 2 cut(s) 311, 821
SmoI CTYRAG 2 cut(s) 311, 821
SpeI ACTAGT 1 cut(s) 794
Sse9I AATT 7 cut(s) 635, 705, 748, 804, 987, 1135, 1428
SsiI CCGC 1 cut(s) 1354
SspI AATATT 2 cut(s) 328, 1273
SspMI CTAG 3 cut(s) 570, 795, 1425
StyD4I CCNGG 3 cut(s) 769, 1512, 1513
StyI CCWWGG 2 cut(s) 529, 1383
TaaI ACNGT 5 cut(s) 25, 741, 856, 953, 1054
TaiI ACGT 3 cut(s) 838, 1335, 1524
TaqI TCGA 5 cut(s) 32, 505, 621, 711, 1140
TasI AATT 7 cut(s) 635, 705, 748, 804, 987, 1135, 1428
TatI WGTACW 2 cut(s) 50, 1008
TfiI GAWTC 2 cut(s) 174, 1483
Tru1I TTAA 7 cut(s) 6, 27, 312, 542, 639, 789, 932
Tru9I TTAA 7 cut(s) 6, 27, 312, 542, 639, 789, 932
TscAI CASTG 4 cut(s) 344, 885, 1001, 1462
TseFI GTSAC 2 cut(s) 836, 970
TseI GCWGC 4 cut(s) 586, 681, 684, 1397
Tsp45I GTSAC 2 cut(s) 836, 970
TspDTI ATGAA 6 cut(s) 61, 816, 909, 1181, 1393, 1526
TspGWI ACGGA 1 cut(s) 721
TspMI CCCGGG 1 cut(s) 1513
TspRI CASTG 4 cut(s) 344, 885, 1001, 1462
Van91I CCANNNNNTGG 1 cut(s) 1562
Vha464I CTTAAG 1 cut(s) 311
VpaK11BI GGWCC 2 cut(s) 1050, 1421
XapI RAATTY 6 cut(s) 635, 705, 748, 804, 1135, 1428
XceI RCATGY 1 cut(s) 718
XcmI CCANNNNNNNNNTGG 3 cut(s) 358, 527, 1390
XmaI CCCGGG 1 cut(s) 1513
XmnI GAANNNNTTC 1 cut(s) 707
XspI CTAG 3 cut(s) 570, 795, 1425
ZrmI AGTACT 1 cut(s) 52
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.