RchiOBHm_Chr4g0437741

cytochrome P450

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
60721392 .. 60723553
2162 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ40597

Sequence Viewer

Length: 582 bp
ATGGCTTCACAGGGAATCAGAGGCCCTCCTTACAGACTTATCCATGGAAACACGAAAGAAATCTCTAACATGTACAAGGAAGCCATGAGCAGACCCTTAAGTTTATCACACAACGTATTTGCTTATGTTCAGCCTCATGTTCACTCATGGAGCAATATATATGGGAAGAATTATCTCCAATGGTTCGGTGCCCGAGCTCAGTTGGTAATTCGAGAACCTGACTTATGCAAACAGATACTGAACAACAAAGATGGAGCTTACCCAAAAAAACCGCCTGAAGAATATGCAAAGAAGCTATTAGGATATGGCCTTGTAACAGCTGAAGCAAAAATGGGCAAAATTGAGAAAGATTTCGAACCATGCCTTCCATGGAGAGAGCTTAAAACCTCACTTGGATTTGCCTTGAAGAGATTTTTCTTTATTGAGATTGCCTCAAGGGGAATTTTTTTTCACCCAAATTTTCCCCTTGAGGGGATTATTCTTCACCCATGTTTATCTTGCAAGGATTTCTACTTACACAAATTCTCCTTAAGGGAATTTTGCCTTACCCGAATCAGCCTTGAGAGGTTTTACCTCACTTAG

Protein Analysis

193

Amino Acids

22.47

Weight (kDa)

9.42

Isoelectric Point (pI)

46.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 188
AciI CCGC 1 cut(s) 272
AcsI RAATTY 4 cut(s) 441, 457, 521, 536
AcuI CTGAAG 2 cut(s) 297, 342
AfaI GTAC 1 cut(s) 74
AfiI CCNNNNNNNGG 2 cut(s) 470, 471
AflII CTTAAG 2 cut(s) 97, 529
AflIII ACRYGT 1 cut(s) 69
AgsI TTSAA 1 cut(s) 406
AluBI AGCT 5 cut(s) 197, 257, 295, 320, 379
AluI AGCT 5 cut(s) 197, 257, 295, 320, 379
Alw21I GWGCWC 1 cut(s) 199
AlwNI CAGNNNCTG 1 cut(s) 238
Ama87I CYCGRG 1 cut(s) 192
AoxI GGCC 2 cut(s) 22, 307
ApoI RAATTY 4 cut(s) 441, 457, 521, 536
Asp700I GAANNNNTTC 1 cut(s) 350
AspS9I GGNCC 1 cut(s) 23
AsuHPI GGTGA 2 cut(s) 443, 476
AsuII TTCGAA 1 cut(s) 354
AvaI CYCGRG 1 cut(s) 192
BaeGI GKGCMC 1 cut(s) 193
BanI GGYRCC 1 cut(s) 188
BanII GRGCYC 1 cut(s) 199
Bbv12I GWGCWC 1 cut(s) 199
BccI CCATC 1 cut(s) 245
BfrI CTTAAG 2 cut(s) 97, 529
BmeT110I CYCGRG 1 cut(s) 192
BmgT120I GGNCC 1 cut(s) 23
BmiI GGNNCC 1 cut(s) 190
BplI GAGNNNNNCTC 2 cut(s) 416, 448
Bpu14I TTCGAA 1 cut(s) 354
BpuEI CTTGAG 3 cut(s) 418, 488, 581
BsaJI CCNNGG 2 cut(s) 43, 368
BsaXI ACNNNNNCTCC 2 cut(s) 509, 539
Bsc4I CCNNNNNNNGG 2 cut(s) 470, 471
BseDI CCNNGG 2 cut(s) 43, 368
BseLI CCNNNNNNNGG 2 cut(s) 470, 471
BseMII CTCAG 1 cut(s) 212
BseSI GKGCMC 1 cut(s) 193
BshFI GGCC 2 cut(s) 24, 309
BshNI GGYRCC 1 cut(s) 188
BsiHKAI GWGCWC 1 cut(s) 199
BsiHKCI CYCGRG 1 cut(s) 192
BslI CCNNNNNNNGG 2 cut(s) 470, 471
BsnI GGCC 2 cut(s) 24, 309
BsoBI CYCGRG 1 cut(s) 192
Bsp119I TTCGAA 1 cut(s) 354
Bsp1286I GDGCHC 2 cut(s) 193, 199
Bsp1407I TGTACA 1 cut(s) 72
Bsp19I CCATGG 2 cut(s) 43, 368
BspACI CCGC 1 cut(s) 272
BspANI GGCC 2 cut(s) 24, 309
BspCNI CTCAG 1 cut(s) 211
BspLI GGNNCC 1 cut(s) 190
BspT104I TTCGAA 1 cut(s) 354
BspT107I GGYRCC 1 cut(s) 188
BspTI CTTAAG 2 cut(s) 97, 529
BsrGI TGTACA 1 cut(s) 72
BssECI CCNNGG 2 cut(s) 43, 368
BssT1I CCWWGG 2 cut(s) 43, 368
Bst6I CTCTTC 1 cut(s) 401
BstAFI CTTAAG 2 cut(s) 97, 529
BstAUI TGTACA 1 cut(s) 72
BstBI TTCGAA 1 cut(s) 354
BstDEI CTNAG 2 cut(s) 198, 579
BstDSI CCRYGG 2 cut(s) 43, 368
BstNSI RCATGY 1 cut(s) 73
BstSLI GKGCMC 1 cut(s) 193
BsuRI GGCC 2 cut(s) 24, 309
BtgI CCRYGG 2 cut(s) 43, 368
CaiI CAGNNNCTG 1 cut(s) 238
Cfr13I GGNCC 1 cut(s) 23
Csp6I GTAC 1 cut(s) 73
CviAII CATG 8 cut(s) 44, 70, 85, 137, 147, 360, 369, 489
CviQI GTAC 1 cut(s) 73
DdeI CTNAG 2 cut(s) 198, 579
Eam1104I CTCTTC 1 cut(s) 401
EarI CTCTTC 1 cut(s) 401
Ecl136II GAGCTC 1 cut(s) 197
Eco130I CCWWGG 2 cut(s) 43, 368
Eco24I GRGCYC 1 cut(s) 199
Eco53kI GAGCTC 1 cut(s) 197
Eco57I CTGAAG 2 cut(s) 297, 342
Eco88I CYCGRG 1 cut(s) 192
EcoICRI GAGCTC 1 cut(s) 197
EcoO109I RGGNCCY 1 cut(s) 23
EcoT14I CCWWGG 2 cut(s) 43, 368
EcoT38I GRGCYC 1 cut(s) 199
ErhI CCWWGG 2 cut(s) 43, 368
FaeI CATG 8 cut(s) 47, 73, 88, 140, 150, 363, 372, 492
FatI CATG 8 cut(s) 43, 69, 84, 136, 146, 359, 368, 488
FriOI GRGCYC 1 cut(s) 199
HaeIII GGCC 2 cut(s) 24, 309
Hin1II CATG 8 cut(s) 47, 73, 88, 140, 150, 363, 372, 492
HinfI GANTC 2 cut(s) 15, 552
HphI GGTGA 2 cut(s) 443, 476
Hpy166II GTNNAC 1 cut(s) 142
Hpy188I TCNGA 1 cut(s) 20
Hpy188III TCNNGA 1 cut(s) 212
Hpy8I GTNNAC 1 cut(s) 142
HpyAV CCTTC 1 cut(s) 374
HpyCH4IV ACGT 1 cut(s) 114
HpyCH4V TGCA 3 cut(s) 228, 287, 501
HpyF3I CTNAG 2 cut(s) 198, 579
HpySE526I ACGT 1 cut(s) 114
Hsp92II CATG 8 cut(s) 47, 73, 88, 140, 150, 363, 372, 492
LmnI GCTCC 2 cut(s) 150, 254
LpnPI CCDG 2 cut(s) 231, 288
MaeII ACGT 1 cut(s) 114
MaeIII GTNAC 1 cut(s) 313
MboII GAAGA 4 cut(s) 178, 290, 418, 473
MhlI GDGCHC 2 cut(s) 193, 199
MluCI AATT 7 cut(s) 169, 207, 339, 441, 457, 521, 536
MnlI CCTC 7 cut(s) 14, 36, 144, 397, 442, 463, 558
MroXI GAANNNNTTC 1 cut(s) 350
MseI TTAA 3 cut(s) 98, 381, 530
MspA1I CMGCKG 1 cut(s) 320
MspCI CTTAAG 2 cut(s) 97, 529
NcoI CCATGG 2 cut(s) 43, 368
NlaIII CATG 8 cut(s) 47, 73, 88, 140, 150, 363, 372, 492
NlaIV GGNNCC 1 cut(s) 190
NspI RCATGY 1 cut(s) 73
NspV TTCGAA 1 cut(s) 354
PciI ACATGT 1 cut(s) 69
PdmI GAANNNNTTC 1 cut(s) 350
PfeI GAWTC 2 cut(s) 15, 552
PscI ACATGT 1 cut(s) 69
Psp124BI GAGCTC 1 cut(s) 199
PspN4I GGNNCC 1 cut(s) 190
PspPI GGNCC 1 cut(s) 23
PstNI CAGNNNCTG 1 cut(s) 238
PvuII CAGCTG 1 cut(s) 320
RsaI GTAC 1 cut(s) 74
RsaNI GTAC 1 cut(s) 73
SacI GAGCTC 1 cut(s) 199
SaqAI TTAA 3 cut(s) 98, 381, 530
Sau96I GGNCC 1 cut(s) 23
SduI GDGCHC 2 cut(s) 193, 199
SfuI TTCGAA 1 cut(s) 354
SmlI CTYRAG 5 cut(s) 97, 433, 467, 529, 560
SmoI CTYRAG 5 cut(s) 97, 433, 467, 529, 560
Sse9I AATT 7 cut(s) 169, 207, 339, 441, 457, 521, 536
SsiI CCGC 1 cut(s) 272
SstI GAGCTC 1 cut(s) 199
StyI CCWWGG 2 cut(s) 43, 368
TaiI ACGT 1 cut(s) 117
TaqI TCGA 2 cut(s) 211, 354
TasI AATT 7 cut(s) 169, 207, 339, 441, 457, 521, 536
TatI WGTACW 1 cut(s) 72
TfiI GAWTC 2 cut(s) 15, 552
Tru1I TTAA 3 cut(s) 98, 381, 530
Tru9I TTAA 3 cut(s) 98, 381, 530
Vha464I CTTAAG 2 cut(s) 97, 529
XapI RAATTY 4 cut(s) 441, 457, 521, 536
XceI RCATGY 1 cut(s) 73
XcmI CCANNNNNNNNNTGG 1 cut(s) 366
XmnI GAANNNNTTC 1 cut(s) 350
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.